Erratum to: Identification and characterization of EYK1, a key gene for erythritol catabolism in Yarrowia lipolytica (Applied Microbiology and Biotechnology, (2017), 10.1007/s00253-017-8361-y);Identification and characterization of EYK1, a key gene for erythritol catabolism in Yarrowia lipolytica

Applied Microbiology and Biotechnology

Volumn 101, Issue 17, 2017, Pages 6587-6596

  Carly, F ^a,b   Gamboa Melendez, H ^b   Vandermies, M ^c   Damblon, C ^c   Nicaud, J M ^b   Fickers, P ^c  

^a UNIVERSITÉ LIBRE DE BRUXELLES   (Belgium)

^b UNIVERSITÉ PARIS SACLAY   (France)

^c UNIVERSITY OF LIÈGE   (Belgium)

Author keywords

Erythritol; Erythrulose kinase; Yarrowia lipolytica

Indexed keywords

BIOTECHNOLOGY; CARBON; ENZYMES; METABOLISM; METABOLITES;

ERYTHRITOL; ERYTHRITOL PRODUCTION; ERYTHRULOSE; EXPERIMENTAL CONDITIONS; EXPERIMENTAL EVIDENCE; GENOMIC CHARACTERIZATION; OSMOPHILIC YEAST; YARROWIA LIPOLYTICA;

GENES;

YARROWIA LIPOLYTICA;

ERYTHRITOL; ERYTHRULOSE; GLYCEROL; PHOSPHOTRANSFERASE; TETROSE;

BIOSYNTHESIS; DRUG EFFECT; FUNGAL GENE; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; OSMOTIC PRESSURE; YARROWIA;

ERYTHRITOL; GENES, FUNGAL; GLYCEROL; MUTAGENESIS, INSERTIONAL; MUTATION; OSMOTIC PRESSURE; PHOSPHOTRANSFERASES; TETROSES; YARROWIA;

EID: 85019592097     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-017-8412-4     Document Type: Erratum

References (32)

1. Adams RW, Holroyd CM, Aguilar JA, Nilsson M, Morris GA (2013) Perfecting WATERGATE: clean proton NMR spectra from aqueous solution. Chem Com 49:358–360 DOI: 10.1039/C2CC37579F
2. Barbier T, Collardb F, Zúñiga-Ripac A, Moriyónc I, Godardd T, Beckere J, Wittmanne C, Van Schaftingenb E, Letesson J (2014) Erythritol feeds the pentose phosphate pathway via three new isomerases leading to d-erythrose-4-phosphate in Brucella. PNAS 50:17815–17820 DOI: 10.1073/pnas.1414622111
3. Barth G, Gaillardin C (1996) Yarrowia lipolytica. In: Nonconventional yeasts in biotechnology. Springer, Berlin, pp 313–388 DOI: 10.1007/978-3-642-79856-6_10
4. Bernt W, Borzelleca J, Flamm G, Munro I (1996) Erythritol: a review of biological and toxicological studies. Regul Toxicol Pharmacol 24:191–197 DOI: 10.1006/rtph.1996.0098
5. Fickers P, Le Dall M-T, Gaillardin C, Thonart P, Nicaud J (2003) New disruption cassettes for rapid gene disruption and marker rescue in the yeast Yarrowia lipolytica. J Microbiol Meth 55:727–737 DOI: 10.1016/j.mimet.2003.07.003
6. Fickers P, Benetti P, Wache Y, Marty A, Mauersberger S, Smit M, Nicaud J (2005) Hydrophobic substrate utilisation by the yeast Yarrowia lipolytica, and its potential applications. FEMS Yeast Res 5:527–543 DOI: 10.1016/j.femsyr.2004.09.004
7. Gancedo C, Llobell A, Ribas JC, Luchi F (1986) Isolation and characterization of mutants from Schyzosaccharomyces pombe defective in glycerol catabolism. Eur J Biochem 159:171–174 DOI: 10.1111/j.1432-1033.1986.tb09848.x
8. Lazar Z, Rossignol T, Verbeke J, Crutz-Le Coq A-M, Nicaud J-M, Robak M (2013) Optimized invertase expression and secretion cassette for improving Yarrowia lipolytica growth on sucrose for industrial applications. J Ind Microbiol Biotechnol 40:1273–1283 DOI: 10.1007/s10295-013-1323-1
9. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods 25:402–408 DOI: 10.1006/meth.2001.1262
10. Lüers GH, Advani R, Wenzel T, Subramani S (1998) The Pichia pastoris dihydroxyacetone kinase is a PTS1-containing, but cytosolic, protein that is essential for growth on methanol. Yeast 14:759–771 DOI: 10.1002/(SICI)1097-0061(19980615)14:8<759::AID-YEA275>3.0.CO;2-A
11. Mauersberger S, Wang HJ, Gaillardin C, Barth G, Nicaud JM (2001) Insertional mutagenesis in the n-alkane-assimilating yeast Yarrowia lipolytica: generation of tagged mutations in genes involved in hydrophobic substrate utilization. J Bacteriol 183:5102–5109 DOI: 10.1128/JB.183.17.5102-5109.2001
12. Mirończuk A-M, Rakicka M, Biegalska A, Rymowicz W, Dobrowolski A (2015) A two-stage fermentation process of erythritol production by yeast Y. lipolytica from molasses and glycerol. Bioresour Technol 198:445–455 DOI: 10.1016/j.biortech.2015.09.008
13. Molin M, Norbeck J, Blomberg A (2003) Dihydroxyacetone kinases in Saccharomyces cerevisiae are involved in detoxification of dihydroxyacetone. J Biol Chem 278:1415–1423 DOI: 10.1074/jbc.M203030200
14. Moon H-J, Jeya M, Kim I-W, Lee J (2010) Biotechnological production of erythritol and its applications. Appl Microbiol Biotechnol 86:1017–1025 DOI: 10.1007/s00253-010-2496-4
15. Nicaud J-M (2012) Yarrowia lipolytica. Yeast 29:409–418 DOI: 10.1002/yea.2921
16. Nishimura K, Harada T, Arita Y, Watanabe H, Iwabuki H, Terada A, Naganuma T, Uzuka Y (2006) Identification of enzyme responsible for erythritol utilization and reaction product in yeast Lipomyces starkeyi. J Biosci Bioeng 101:303–308 DOI: 10.1263/jbb.101.303
17. Paradowska K, Nitka D (2009) Purification and characterization of erythritol dehydrogenase from Mycobacterium smegmatis. Ann UMCS Pharmacia 22:47–55 DOI: 10.2478/v10080-008-0177-8
18. Pignède G, Wang HJ, Fudalej F, Seman M, Gaillardin C, Nicaud JM (2000) Autocloning and amplification of LIP2 in Yarrowia lipolytica. Appl Environ Microbiol 66:3283–3289 DOI: 10.1128/AEM.66.8.3283-3289.2000
19. Querol A, Barrio E, Huerta T, Ramón D (1992) Molecular monitoring of wine fermentations conducted by active dry yeast strains. Appl Environ Microbiol 58:2948–2953
20. Rakicka M, Rywińska A, Cybulski K, Rymowicz W (2016) Enhanced production of erythritol and mannitol by Yarrowia lipolytica in media containing surfactants. Braz J Microbiol 47:417–423 DOI: 10.1016/j.bjm.2016.01.011
21. Rymowicz W, Rywińska A, Marcinkiewicz M (2008) High-yield production of erythritol from raw glycerol in fed-batch cultures of Yarrowia lipolytica. Biotechnol Lett 31:377–380 DOI: 10.1007/s10529-008-9884-1
22. Rywińska A, Juszczyk P, Wojtatowicz M, Robak M, Lazar Z, Tomaszewska L, Rymowicz W (2013) Glycerol as a promising substrate for Yarrowia lipolytica biotechnological applications. Biomass Bioenergy 48:148–166 DOI: 10.1016/j.biombioe.2012.11.021
23. Sambrook J, Fritsch E, Maniatis T (1989) Molecular cloning: a laboratory manual: Vol. 2 (S.l.: Cold Spring Harbor)
24. Sassi H, Delvigne F, Kar T, Nicaud J-M, Coq A-M, Steels S, Fickers P (2016) Deciphering how LIP2 and POX2 promoters can optimally regulate recombinant protein production in the yeast Yarrowia lipolytica. Microb Cell Factories 15:159–169 DOI: 10.1186/s12934-016-0558-8
25. Thevenieau F, Le Dall MT, Nthangeni B, Mauersberger S, Marchal R, Nicaud JM (2007) Characterization of Yarrowia lipolytica mutants affected in hydrophobic substrate utilization. Fungal Genet Biol 44:531–542 DOI: 10.1016/j.fgb.2006.09.001
26. Tomaszewska L, Rywińska A, Gładkowski W (2012) Production of erythritol and mannitol by Yarrowia lipolytica yeast in media containing glycerol. J Ind Microbiol Biotechnol 39:1333–1343 DOI: 10.1007/s10295-012-1145-6
27. Tomaszewska L, Rywińska A, Rymowicz W (2014a) High selectivity of erythritol production from glycerol by Yarrowia lipolytica. Biomass Bioenergy 64:309–320 DOI: 10.1016/j.biombioe.2014.03.005
28. Tomaszewska L, Rakicka M, Rymowicz W, Rywińska A (2014b) A comparative study on glycerol metabolism to erythritol and citric acid in Yarrowia lipolytica yeast cells. FEMS Yeast Res:966–976
29. Vandermies M, Denies O, Nicaud JM, Fickers P (2017) EYK encoding erythrulose kinase as a catabolic selectable marker for genome editing in the non-conventional yeast Yarrowia lipolytica. To be published
30. Workman M, Holt P, Thykaer J (2013) Comparing cellular performance of Yarrowia lipolytica during growth on glucose and glycerol in submerged cultivations. AMB Express 3:58 DOI: 10.1186/2191-0855-3-58
31. Yang L-B, Zhan X-B, Zheng Z-Y, Wu J-R, Gao M-J, Lin C-C (2014) A novel osmotic pressure control fed-batch fermentation strategy for improvement of erythritol production by Yarrowia lipolytica from glycerol. Bioresour Technol 151:120–127 DOI: 10.1016/j.biortech.2013.10.031
32. Zinjarde SS (2014) Food-related applications of Yarrowia lipolytica. Food Chem 152:1–10 DOI: 10.1016/j.foodchem.2013.11.117