-
2
-
-
84989637884
-
Microbes of the avian cecum: Types present and substrates utilized
-
1:STN:280:DyaK3c7htFKksg%3D%3D 2575127
-
Mead GC. Microbes of the avian cecum: types present and substrates utilized. J Exp Zool Suppl. 1989;3:48-54.
-
(1989)
J Exp Zool Suppl
, vol.3
, pp. 48-54
-
-
Mead, G.C.1
-
3
-
-
0002413788
-
Digestion of dry matter and absorption of water in the intestine and cecum of rock ptarmigan
-
Gasaway WC, White RG, Holleman DF. Digestion of dry matter and absorption of water in the intestine and cecum of rock ptarmigan. Condor. 1976;78:77-84.
-
(1976)
Condor
, vol.78
, pp. 77-84
-
-
Gasaway, W.C.1
White, R.G.2
Holleman, D.F.3
-
4
-
-
84989603734
-
Interspecific variation in sugar and amino acid transport by the avian cecum
-
1:STN:280:DyaK3c7htFKltw%3D%3D 2575122
-
Obst BS, Diamond JM. Interspecific variation in sugar and amino acid transport by the avian cecum. J Exp Zool Suppl. 1989;3:117-26.
-
(1989)
J Exp Zool Suppl
, vol.3
, pp. 117-126
-
-
Obst, B.S.1
Diamond, J.M.2
-
5
-
-
80052914104
-
Dietary divercin modifies gastrointestinal microbiota and improves growth performance in broiler chickens
-
1:CAS:528:DC%2BC3MXht1WmsbfJ 21919577
-
Jozefiak D, Sip A, Rawski M, Rutkowski A, Kaczmarek S, Hojberg O, et al. Dietary divercin modifies gastrointestinal microbiota and improves growth performance in broiler chickens. Br Poult Sci. 2011;52:492-9.
-
(2011)
Br Poult Sci
, vol.52
, pp. 492-499
-
-
Jozefiak, D.1
Sip, A.2
Rawski, M.3
Rutkowski, A.4
Kaczmarek, S.5
Hojberg, O.6
-
6
-
-
79951746148
-
Influence of whole wheat inclusion and a blend of essential oils on the performance, nutrient utilisation, digestive tract development and ileal microbiota profile of broiler chickens
-
1:CAS:528:DC%2BC3MXitFGmtro%3D 21337207
-
Amerah AM, Peron A, Zaefarian F, Ravindran V. Influence of whole wheat inclusion and a blend of essential oils on the performance, nutrient utilisation, digestive tract development and ileal microbiota profile of broiler chickens. Br Poult Sci. 2011;52:124-32.
-
(2011)
Br Poult Sci
, vol.52
, pp. 124-132
-
-
Amerah, A.M.1
Peron, A.2
Zaefarian, F.3
Ravindran, V.4
-
7
-
-
41149103532
-
Antimicrobial activity of lupulone against Clostridium perfringens in the chicken intestinal tract jejunum and caecum
-
1:CAS:528:DC%2BD1cXjs1Kqu7g%3D 18276602
-
Siragusa GR, Haas GJ, Matthews PD, Smith RJ, Buhr RJ, Dale NM, et al. Antimicrobial activity of lupulone against Clostridium perfringens in the chicken intestinal tract jejunum and caecum. J Antimicrob Chemother. 2008;61:853-8.
-
(2008)
J Antimicrob Chemother
, vol.61
, pp. 853-858
-
-
Siragusa, G.R.1
Haas, G.J.2
Matthews, P.D.3
Smith, R.J.4
Buhr, R.J.5
Dale, N.M.6
-
8
-
-
78049253926
-
Interrelations between the microbiotas in the litter and in the intestines of commercial broiler chickens
-
2950482 1:CAS:528:DC%2BC3cXhtlartr7K 20693454
-
Cressman MD, Yu Z, Nelson MC, Moeller SJ, Lilburn MS, Zerby HN. Interrelations between the microbiotas in the litter and in the intestines of commercial broiler chickens. Appl Environ Microbiol. 2010;76:6572-82.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 6572-6582
-
-
Cressman, M.D.1
Yu, Z.2
Nelson, M.C.3
Moeller, S.J.4
Lilburn, M.S.5
Zerby, H.N.6
-
9
-
-
84876140625
-
Response of intestinal microbiota to antibiotic growth promoters in chickens
-
1:CAS:528:DC%2BC3sXlslyltrg%3D 23461609
-
Lin J, Hunkapiller AA, Layton AC, Chang YJ, Robbins KR. Response of intestinal microbiota to antibiotic growth promoters in chickens. Foodborne Pathog Dis. 2013;10:331-7.
-
(2013)
Foodborne Pathog Dis
, vol.10
, pp. 331-337
-
-
Lin, J.1
Hunkapiller, A.A.2
Layton, A.C.3
Chang, Y.J.4
Robbins, K.R.5
-
10
-
-
81555213130
-
The effect of including Lactobacillus reuteri KUB-AC5 during post-hatch feeding on the growth and ileum microbiota of broiler chickens
-
1:CAS:528:DC%2BC38Xjs1GqtQ%3D%3D 22080014
-
Nakphaichit M, Thanomwongwattana S, Phraephaisarn C, Sakamoto N, Keawsompong S, Nakayama J, et al. The effect of including Lactobacillus reuteri KUB-AC5 during post-hatch feeding on the growth and ileum microbiota of broiler chickens. Poult Sci. 2011;90:2753-65.
-
(2011)
Poult Sci
, vol.90
, pp. 2753-2765
-
-
Nakphaichit, M.1
Thanomwongwattana, S.2
Phraephaisarn, C.3
Sakamoto, N.4
Keawsompong, S.5
Nakayama, J.6
-
11
-
-
80555126855
-
Bacillus subtilis-based direct-fed microbials augment macrophage function in broiler chickens
-
1:CAS:528:DC%2BC3MXhsVahtbfE 21338997
-
Lee KW, Li G, Lillehoj HS, Lee SH, Jang SI, Babu US, et al. Bacillus subtilis-based direct-fed microbials augment macrophage function in broiler chickens. Res Vet Sci. 2011;91:e87-91.
-
(2011)
Res Vet Sci
, vol.91
, pp. e87-91
-
-
Lee, K.W.1
Li, G.2
Lillehoj, H.S.3
Lee, S.H.4
Jang, S.I.5
Babu, U.S.6
-
12
-
-
84871905995
-
Influence of Salmonella enterica serovar enteritidis infection on the development of the cecum microbiota in newly hatched chicks
-
3553771 1:CAS:528:DC%2BC3sXkvVKjsrw%3D 23144133
-
Juricova H, Videnska P, Lukac M, Faldynova M, Babak V, Havlickova H, et al. Influence of Salmonella enterica serovar enteritidis infection on the development of the cecum microbiota in newly hatched chicks. Appl Environ Microbiol. 2013;79:745-7.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 745-747
-
-
Juricova, H.1
Videnska, P.2
Lukac, M.3
Faldynova, M.4
Babak, V.5
Havlickova, H.6
-
13
-
-
84864613327
-
Changes in the caecal microflora of chickens following Clostridium perfringens challenge to induce necrotic enteritis
-
22487456
-
Stanley D, Keyburn AL, Denman SE, Moore RJ. Changes in the caecal microflora of chickens following Clostridium perfringens challenge to induce necrotic enteritis. Vet Microbiol. 2012;159:155-62.
-
(2012)
Vet Microbiol
, vol.159
, pp. 155-162
-
-
Stanley, D.1
Keyburn, A.L.2
Denman, S.E.3
Moore, R.J.4
-
14
-
-
11144257685
-
Effects of two probiotic Lactobacillus strains on jejunal and cecal microbiota of broiler chicken under acute heat stress condition as revealed by molecular analysis of 16S rRNA genes
-
1:CAS:528:DC%2BD2MXhtlarsbs%3D 15611608
-
Lan PT, Sakamoto M, Benno Y. Effects of two probiotic Lactobacillus strains on jejunal and cecal microbiota of broiler chicken under acute heat stress condition as revealed by molecular analysis of 16S rRNA genes. Microbiol Immunol. 2004;48:917-29.
-
(2004)
Microbiol Immunol
, vol.48
, pp. 917-929
-
-
Lan, P.T.1
Sakamoto, M.2
Benno, Y.3
-
15
-
-
51349126096
-
Influence of stressors on normal intestinal microbiota, intestinal morphology, and susceptibility to Salmonella enteritidis colonization in broilers
-
1:CAS:528:DC%2BD1cXhtFWqu7nE 18753440
-
Burkholder KM, Thompson KL, Einstein ME, Applegate TJ, Patterson JA. Influence of stressors on normal intestinal microbiota, intestinal morphology, and susceptibility to Salmonella enteritidis colonization in broilers. Poult Sci. 2008;87:1734-41.
-
(2008)
Poult Sci
, vol.87
, pp. 1734-1741
-
-
Burkholder, K.M.1
Thompson, K.L.2
Einstein, M.E.3
Applegate, T.J.4
Patterson, J.A.5
-
16
-
-
84899095620
-
Extensive microbial and functional diversity within the chicken cecal microbiome
-
3962364 24657972
-
Sergeant MJ, Constantinidou C, Cogan TA, Bedford MR, Penn CW, Pallen MJ. Extensive microbial and functional diversity within the chicken cecal microbiome. PLoS One. 2014;9:e91941.
-
(2014)
PLoS One
, vol.9
, pp. e91941
-
-
Sergeant, M.J.1
Constantinidou, C.2
Cogan, T.A.3
Bedford, M.R.4
Penn, C.W.5
Pallen, M.J.6
-
17
-
-
38949138569
-
Application of methods for identifying broiler chicken gut bacterial species linked with increased energy metabolism
-
2227708 1:CAS:528:DC%2BD1cXhvVWjsr0%3D 18065621
-
Torok VA, Ophel-Keller K, Loo M, Hughes RJ. Application of methods for identifying broiler chicken gut bacterial species linked with increased energy metabolism. Appl Environ Microbiol. 2008;74:783-91.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 783-791
-
-
Torok, V.A.1
Ophel-Keller, K.2
Loo, M.3
Hughes, R.J.4
-
18
-
-
84871051885
-
Intestinal microbiota associated with differential feed conversion efficiency in chickens
-
1:CAS:528:DC%2BC38Xhs1ektL7P 22249719
-
Stanley D, Denman SE, Hughes RJ, Geier MS, Crowley TM, Chen H, et al. Intestinal microbiota associated with differential feed conversion efficiency in chickens. Appl Microbiol Biotechnol. 2012;96:1361-9.
-
(2012)
Appl Microbiol Biotechnol
, vol.96
, pp. 1361-1369
-
-
Stanley, D.1
Denman, S.E.2
Hughes, R.J.3
Geier, M.S.4
Crowley, T.M.5
Chen, H.6
-
19
-
-
84875831864
-
Identification of chicken intestinal microbiota correlated with the efficiency of energy extraction from feed
-
23434185
-
Stanley D, Geier MS, Denman S, Haring VR, Crowley TM, Hughes RJ, et al. Identification of chicken intestinal microbiota correlated with the efficiency of energy extraction from feed. Vet Microbiol. 2013;164:85-92.
-
(2013)
Vet Microbiol
, vol.164
, pp. 85-92
-
-
Stanley, D.1
Geier, M.S.2
Denman, S.3
Haring, V.R.4
Crowley, T.M.5
Hughes, R.J.6
-
20
-
-
0018010850
-
Retrograde movement of digesta in the duodenum of the chick: Extent, frequency, and nutritional implications
-
1:CAS:528:DyaE1cXlslymt7k%3D 581087
-
Sklan D, Shachaf B, Baron J, Hurwitz S. Retrograde movement of digesta in the duodenum of the chick: extent, frequency, and nutritional implications. J Nutr. 1978;108:1485-90.
-
(1978)
J Nutr
, vol.108
, pp. 1485-1490
-
-
Sklan, D.1
Shachaf, B.2
Baron, J.3
Hurwitz, S.4
-
21
-
-
0028958123
-
Effect of salt and water balance on colonic motility of white leghorn roosters
-
1:CAS:528:DyaK2MXkslKrt70%3D 7900912
-
Brummermann M, Braun EJ. Effect of salt and water balance on colonic motility of white leghorn roosters. Am J Physiol. 1995;268:R690-8.
-
(1995)
Am J Physiol
, vol.268
, pp. R690-R698
-
-
Brummermann, M.1
Braun, E.J.2
-
22
-
-
84896696508
-
Highly variable microbiota development in the chicken gastrointestinal tract
-
3877270 24391931
-
Stanley D, Geier MS, Hughes RJ, Denman SE, Moore RJ. Highly variable microbiota development in the chicken gastrointestinal tract. PLoS One. 2013;8:e84290.
-
(2013)
PLoS One
, vol.8
, pp. e84290
-
-
Stanley, D.1
Geier, M.S.2
Hughes, R.J.3
Denman, S.E.4
Moore, R.J.5
-
23
-
-
84865306386
-
Faecal and caecal microbiota profiles of mice do not cluster in the same way
-
1:CAS:528:DC%2BC38XhtlWgtLvO 22723645
-
Pang W, Vogensen FK, Nielsen DS, Hansen AK. Faecal and caecal microbiota profiles of mice do not cluster in the same way. Lab Anim. 2012;46:231-6.
-
(2012)
Lab Anim
, vol.46
, pp. 231-236
-
-
Pang, W.1
Vogensen, F.K.2
Nielsen, D.S.3
Hansen, A.K.4
-
24
-
-
84861134838
-
Abrupt temporal fluctuations in the chicken fecal microbiota are explained by its gastrointestinal origin
-
3318845 1:CAS:528:DC%2BC38XlsVSlt7Y%3D 22307311
-
Sekelja M, Rud I, Knutsen SH, Denstadli V, Westereng B, Naes T, et al. Abrupt temporal fluctuations in the chicken fecal microbiota are explained by its gastrointestinal origin. Appl Environ Microbiol. 2012;78:2941-8.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 2941-2948
-
-
Sekelja, M.1
Rud, I.2
Knutsen, S.H.3
Denstadli, V.4
Westereng, B.5
Naes, T.6
-
25
-
-
2442722963
-
Nutritional, morphological, and behavioural considerations for rearing birds for release
-
Thomas VG. Nutritional, morphological, and behavioural considerations for rearing birds for release. J Orn. 1987;128:423-30.
-
(1987)
J Orn
, vol.128
, pp. 423-430
-
-
Thomas, V.G.1
-
26
-
-
0036049862
-
Molecular analysis of bacterial populations in the ileum of broiler chickens and comparison with bacteria in the cecum
-
1:CAS:528:DC%2BD38XmtlCkt7w%3D 19709251
-
Gong J, Forster RJ, Yu H, Chambers JR, Wheatcroft R, Sabour PM, et al. Molecular analysis of bacterial populations in the ileum of broiler chickens and comparison with bacteria in the cecum. FEMS Microbiol Ecol. 2002;41:171-9.
-
(2002)
FEMS Microbiol Ecol
, vol.41
, pp. 171-179
-
-
Gong, J.1
Forster, R.J.2
Yu, H.3
Chambers, J.R.4
Wheatcroft, R.5
Sabour, P.M.6
-
27
-
-
0036136459
-
16S rRNA-based analysis of microbiota from the cecum of broiler chickens
-
126585 1:CAS:528:DC%2BD38Xjt1WgsQ%3D%3D 11772618
-
Zhu XY, Zhong T, Pandya Y, Joerger RD. 16S rRNA-based analysis of microbiota from the cecum of broiler chickens. Appl Environ Microbiol. 2002;68:124-37.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 124-137
-
-
Zhu, X.Y.1
Zhong, T.2
Pandya, Y.3
Joerger, R.D.4
-
28
-
-
0242489005
-
Diversity and succession of the intestinal bacterial community of the maturing broiler chicken
-
262306 1:CAS:528:DC%2BD3sXptVyktbs%3D 14602645
-
Lu J, Idris U, Harmon B, Hofacre C, Maurer JJ, Lee MD. Diversity and succession of the intestinal bacterial community of the maturing broiler chicken. Appl Environ Microbiol. 2003;69:6816-24.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6816-6824
-
-
Lu, J.1
Idris, U.2
Harmon, B.3
Hofacre, C.4
Maurer, J.J.5
Lee, M.D.6
-
29
-
-
0036781558
-
Spatial and temporal variation of the intestinal bacterial community in commercially raised broiler chickens during growth
-
12219265
-
van der Wielen PW, Keuzenkamp DA, Lipman LJ, van Knapen F, Biesterveld S. Spatial and temporal variation of the intestinal bacterial community in commercially raised broiler chickens during growth. Microb Ecol. 2002;44:286-93.
-
(2002)
Microb Ecol
, vol.44
, pp. 286-293
-
-
Van Der Wielen, P.W.1
Keuzenkamp, D.A.2
Lipman, L.J.3
Van Knapen, F.4
Biesterveld, S.5
-
30
-
-
70349488325
-
Low counts of Faecalibacterium prausnitzii in colitis microbiota
-
1:STN:280:DC%2BD1MvpsFaisQ%3D%3D 19235886
-
Sokol H, Seksik P, Furet JP, Firmesse O, Nion-Larmurier I, Beaugerie L, et al. Low counts of Faecalibacterium prausnitzii in colitis microbiota. Inflamm Bowel Dis. 2009;15:1183-9.
-
(2009)
Inflamm Bowel Dis
, vol.15
, pp. 1183-1189
-
-
Sokol, H.1
Seksik, P.2
Furet, J.P.3
Firmesse, O.4
Nion-Larmurier, I.5
Beaugerie, L.6
-
31
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
1959459 1:CAS:528:DC%2BD2sXpvVGjsbg%3D 17699621
-
Frank DN, St Amand AL, Feldman RA, Boedeker EC, Harpaz N, Pace NR. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Acad Sci U S A. 2007;104:13780-5.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
St Amand, A.L.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
Pace, N.R.6
-
32
-
-
85027947787
-
Induction of colonic regulatory T cells by indigenous Clostridium species
-
3969237 1:CAS:528:DC%2BC3MXmsVCjsw%3D%3D 21205640
-
Atarashi K, Tanoue T, Shima T, Imaoka A, Kuwahara T, Momose Y, et al. Induction of colonic regulatory T cells by indigenous Clostridium species. Science. 2011;331:337-41.
-
(2011)
Science
, vol.331
, pp. 337-341
-
-
Atarashi, K.1
Tanoue, T.2
Shima, T.3
Imaoka, A.4
Kuwahara, T.5
Momose, Y.6
-
33
-
-
33845678685
-
16S rRNA gene-based analysis of mucosa-associated bacterial community and phylogeny in the chicken gastrointestinal tracts: From crops to ceca
-
1:CAS:528:DC%2BD2sXht1egtrc%3D 17233749
-
Gong J, Si W, Forster RJ, Huang R, Yu H, Yin Y, et al. 16S rRNA gene-based analysis of mucosa-associated bacterial community and phylogeny in the chicken gastrointestinal tracts: from crops to ceca. FEMS Microbiol Ecol. 2007;59:147-57.
-
(2007)
FEMS Microbiol Ecol
, vol.59
, pp. 147-157
-
-
Gong, J.1
Si, W.2
Forster, R.J.3
Huang, R.4
Yu, H.5
Yin, Y.6
-
34
-
-
77952888251
-
Influence of dietary mushroom Agaricus bisporus on intestinal morphology and microflora composition in broiler chickens
-
1:STN:280:DC%2BC3czjvFyqtA%3D%3D 20207382
-
Giannenas I, Tontis D, Tsalie E, Chronis EF, Doukas D, Kyriazakis I. Influence of dietary mushroom Agaricus bisporus on intestinal morphology and microflora composition in broiler chickens. Res Vet Sci. 2010;89:78-84.
-
(2010)
Res Vet Sci
, vol.89
, pp. 78-84
-
-
Giannenas, I.1
Tontis, D.2
Tsalie, E.3
Chronis, E.F.4
Doukas, D.5
Kyriazakis, I.6
-
35
-
-
0017381987
-
Fermentation of mucin and plant polysaccharides by strains of Bacteroides from the human colon
-
170684 1:STN:280:DyaE2s7ls1SrsA%3D%3D 848954
-
Salyers AA, Vercellotti JR, West SE, Wilkins TD. Fermentation of mucin and plant polysaccharides by strains of Bacteroides from the human colon. Appl Environ Microbiol. 1977;33:319-22.
-
(1977)
Appl Environ Microbiol
, vol.33
, pp. 319-322
-
-
Salyers, A.A.1
Vercellotti, J.R.2
West, S.E.3
Wilkins, T.D.4
-
36
-
-
4544236277
-
Inhibition of Clostridium perfringens sporulation by Bacteroides fragilis and short-chain fatty acids
-
1:CAS:528:DC%2BD2cXnslKntrg%3D 16701530
-
Wrigley DM. Inhibition of Clostridium perfringens sporulation by Bacteroides fragilis and short-chain fatty acids. Anaerobe. 2004;10:295-300.
-
(2004)
Anaerobe
, vol.10
, pp. 295-300
-
-
Wrigley, D.M.1
-
37
-
-
77954738601
-
Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota
-
2901479 1:CAS:528:DC%2BC3cXovFyit7s%3D 20566854
-
Round JL, Mazmanian SK. Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota. Proc Natl Acad Sci U S A. 2010;107:12204-9.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 12204-12209
-
-
Round, J.L.1
Mazmanian, S.K.2
-
38
-
-
63849241608
-
Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine
-
1:CAS:528:DC%2BD1MXkvFGqt74%3D 19222573
-
Louis P, Flint HJ. Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine. FEMS Microbiol Lett. 2009;294:1-8.
-
(2009)
FEMS Microbiol Lett
, vol.294
, pp. 1-8
-
-
Louis, P.1
Flint, H.J.2
-
39
-
-
0034655515
-
Adhesion to cellulose by Ruminococcus albus: A combination of cellulosomes and Pil-proteins?
-
1:CAS:528:DC%2BD3cXit1Wgsrg%3D 10754233
-
Morrison M, Miron J. Adhesion to cellulose by Ruminococcus albus: a combination of cellulosomes and Pil-proteins? FEMS Microbiol Lett. 2000;185:109-15.
-
(2000)
FEMS Microbiol Lett
, vol.185
, pp. 109-115
-
-
Morrison, M.1
Miron, J.2
-
40
-
-
84902850177
-
The interplay between Campylobacter and Helicobacter species and other gastrointestinal microbiota of commercial broiler chickens
-
Kaakoush NO, Sodhi N, Chenu JW, Cox JM, Riordan SM, Mitchell HM. The interplay between Campylobacter and Helicobacter species and other gastrointestinal microbiota of commercial broiler chickens. Gut Pathog. 2014;6:1841.
-
(2014)
Gut Pathog
, vol.6
, pp. 1841
-
-
Kaakoush, N.O.1
Sodhi, N.2
Chenu, J.W.3
Cox, J.M.4
Riordan, S.M.5
Mitchell, H.M.6
-
41
-
-
84874037740
-
Immune-modulating gut symbionts are not "candidatus Arthromitus"
-
1:CAS:528:DC%2BC38XhsVSltrjK 23013646
-
Thompson CL, Mikaelyan A, Brune A. Immune-modulating gut symbionts are not "Candidatus Arthromitus". Mucosal Immunol. 2013;6:200-1.
-
(2013)
Mucosal Immunol
, vol.6
, pp. 200-201
-
-
Thompson, C.L.1
Mikaelyan, A.2
Brune, A.3
-
42
-
-
70349742524
-
The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses
-
1:CAS:528:DC%2BD1MXhsVChtLrF 19833089
-
Gaboriau-Routhiau V, Rakotobe S, Lecuyer E, Mulder I, Lan A, Bridonneau C, et al. The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses. Immunity. 2009;31:677-89.
-
(2009)
Immunity
, vol.31
, pp. 677-689
-
-
Gaboriau-Routhiau, V.1
Rakotobe, S.2
Lecuyer, E.3
Mulder, I.4
Lan, A.5
Bridonneau, C.6
-
43
-
-
70350343544
-
Induction of intestinal Th17 cells by segmented filamentous bacteria
-
2796826 1:CAS:528:DC%2BD1MXhsFKltL%2FL 19836068
-
Ivanov II, Atarashi K, Manel N, Brodie EL, Shima T, Karaoz U, et al. Induction of intestinal Th17 cells by segmented filamentous bacteria. Cell. 2009;139:485-98.
-
(2009)
Cell
, vol.139
, pp. 485-498
-
-
Ivanov, I.I.1
Atarashi, K.2
Manel, N.3
Brodie, E.L.4
Shima, T.5
Karaoz, U.6
-
44
-
-
0029093082
-
Segmented filamentous bacteria are indigenous intestinal bacteria that activate intraepithelial lymphocytes and induce MHC class II molecules and fucosyl asialo GM1 glycolipids on the small intestinal epithelial cells in the ex-germ-free mouse
-
1:CAS:528:DyaK2MXnvV2jtbw%3D 7494493
-
Umesaki Y, Okada Y, Matsumoto S, Imaoka A, Setoyama H. Segmented filamentous bacteria are indigenous intestinal bacteria that activate intraepithelial lymphocytes and induce MHC class II molecules and fucosyl asialo GM1 glycolipids on the small intestinal epithelial cells in the ex-germ-free mouse. Microbiol Immunol. 1995;39:555-62.
-
(1995)
Microbiol Immunol
, vol.39
, pp. 555-562
-
-
Umesaki, Y.1
Okada, Y.2
Matsumoto, S.3
Imaoka, A.4
Setoyama, H.5
-
45
-
-
0033004028
-
Segmented filamentous bacteria are potent stimuli of a physiologically normal state of the murine gut mucosal immune system
-
96557 1:CAS:528:DyaK1MXitFCrt7w%3D 10085047
-
Talham GL, Jiang HQ, Bos NA, Cebra JJ. Segmented filamentous bacteria are potent stimuli of a physiologically normal state of the murine gut mucosal immune system. Infect Immun. 1999;67:1992-2000.
-
(1999)
Infect Immun
, vol.67
, pp. 1992-2000
-
-
Talham, G.L.1
Jiang, H.Q.2
Bos, N.A.3
Cebra, J.J.4
-
46
-
-
84861954448
-
'Candidatus Arthromitus' revised: Segmented filamentous bacteria in arthropod guts are members of Lachnospiraceae
-
1:CAS:528:DC%2BC38XhtFOhsbjE 22436008
-
Thompson CL, Vier R, Mikaelyan A, Wienemann T, Brune A. 'Candidatus Arthromitus' revised: segmented filamentous bacteria in arthropod guts are members of Lachnospiraceae. Environ Microbiol. 2012;14:1454-65.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1454-1465
-
-
Thompson, C.L.1
Vier, R.2
Mikaelyan, A.3
Wienemann, T.4
Brune, A.5
-
47
-
-
77951480203
-
Segmented filamentous bacteria take the stage
-
3010405 1:CAS:528:DC%2BC3cXkvV2qu74%3D 20147894
-
Ivanov II, Littman DR. Segmented filamentous bacteria take the stage. Mucosal Immunol. 2010;3:209-12.
-
(2010)
Mucosal Immunol
, vol.3
, pp. 209-212
-
-
Ivanov, I.I.1
Littman, D.R.2
-
48
-
-
2442510059
-
Improved extraction of PCR-quality community DNA from digesta and fecal samples
-
1:CAS:528:DC%2BD2cXktV2nu7s%3D 15152600
-
Yu Z, Morrison M. Improved extraction of PCR-quality community DNA from digesta and fecal samples. Biotechniques. 2004;36:808-12.
-
(2004)
Biotechniques
, vol.36
, pp. 808-812
-
-
Yu, Z.1
Morrison, M.2
-
49
-
-
0001857117
-
-
16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors Chichester, United Kingdom: John Wiley and Sons
-
Lane D J. 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. Chichester, United Kingdom: John Wiley and Sons; 1991. pp. 115-175.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
50
-
-
0030762263
-
Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils
-
1:CAS:528:DyaK2sXmt1yksL0%3D 9308181
-
Felske A, Rheims H, Wolterink A, Stackebrandt E, Akkermans AD. Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils. Microbiology. 1997;143:2983-9.
-
(1997)
Microbiology
, vol.143
, pp. 2983-2989
-
-
Felske, A.1
Rheims, H.2
Wolterink, A.3
Stackebrandt, E.4
Akkermans, A.D.5
-
51
-
-
38749091304
-
Pyrobayes: An improved base caller for SNP discovery in pyrosequences
-
1:CAS:528:DC%2BD1cXhsV2ksLo%3D 18193056
-
Quinlan AR, Stewart DA, Stromberg MP, Marth GT. Pyrobayes: an improved base caller for SNP discovery in pyrosequences. Nat Methods. 2008;5:179-81.
-
(2008)
Nat Methods
, vol.5
, pp. 179-181
-
-
Quinlan, A.R.1
Stewart, D.A.2
Stromberg, M.P.3
Marth, G.T.4
-
52
-
-
29144504177
-
At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies
-
1317345 1:CAS:528:DC%2BD2MXhtlehtLrO 16332745
-
Ashelford KE, Chuzhanova NA, Fry JC, Jones AJ, Weightman AJ. At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Appl Environ Microbiol. 2005;71:7724-36.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7724-7736
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
53
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
3156573 1:CAS:528:DC%2BC3cXksFalurg%3D 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods. 2010;7:335-6.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
54
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
1:CAS:528:DC%2BC3cXht1WhtbzM 20709691
-
Edgar RC. Search and clustering orders of magnitude faster than BLAST. Bioinformatics. 2010;26:2460-1.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
55
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
3150044 1:CAS:528:DC%2BC3MXhtVSiurvL 21700674
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics. 2011;27:2194-200.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
56
-
-
35648991375
-
EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
-
1:CAS:528:DC%2BD2sXhsVanu73P 17911292
-
Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, et al. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol. 2007;57:2259-61.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2259-2261
-
-
Chun, J.1
Lee, J.H.2
Jung, Y.3
Kim, M.4
Kim, S.5
Kim, B.K.6
|