-
1
-
-
4444247028
-
Microflora ecology of the chicken intestine using 16S ribosomal DNA primers
-
Amit-Romach E, Sklan D & Unil Z (2004) Microflora ecology of the chicken intestine using 16S ribosomal DNA primers. Poult Sci 83: 1093-1098.
-
(2004)
Poult Sci
, vol.83
, pp. 1093-1098
-
-
Amit-Romach, E.1
Sklan, D.2
Unil, Z.3
-
2
-
-
0035650509
-
Percent G+C profiling accurately reveals diet-related differences in the gastrointestinal microbial community of broiler chickens
-
Apajalahti JH, Kettunen A, Bedford MR & Holben WE (2001) Percent G+C profiling accurately reveals diet-related differences in the gastrointestinal microbial community of broiler chickens. Appl Environ Microbiol 67: 5656-5667.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 5656-5667
-
-
Apajalahti, J.H.1
Kettunen, A.2
Bedford, M.R.3
Holben, W.E.4
-
3
-
-
29144504177
-
At least one in twenty 16S rRNA sequence records currently held in public repositories estimated to contain substantial anomalies
-
Ashelford KE, Chuzhanova N, Fry JC, Jones AJ & Weightman WJ (2005) At least one in twenty 16S rRNA sequence records currently held in public repositories estimated to contain substantial anomalies. Appl Environ Microbiol 71: 7724-7736.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7724-7736
-
-
Ashelford, K.E.1
Chuzhanova, N.2
Fry, J.C.3
Jones, A.J.4
Weightman, W.J.5
-
4
-
-
0018399772
-
The intestinal microflora of poultry and game birds during life and after storage. Address of the president of the Society for Applied Bacteriology delivered at a meeting of the society on 10 January 1979
-
Barnes EM (1979) The intestinal microflora of poultry and game birds during life and after storage. Address of the president of the Society for Applied Bacteriology delivered at a meeting of the society on 10 January 1979. J Appl Bacteriol 46: 407-419.
-
(1979)
J Appl Bacteriol
, vol.46
, pp. 407-419
-
-
Barnes, E.M.1
-
5
-
-
0015337410
-
The intestinal flora of the chicken in the period 2 to 6 weeks of age, with particular reference to the anaerobic bacteria
-
Barnes EM, Mead GC, Barnum DA & Harry EG (1972) The intestinal flora of the chicken in the period 2 to 6 weeks of age, with particular reference to the anaerobic bacteria. Br Poult Sci 13: 311-326.
-
(1972)
Br Poult Sci
, vol.13
, pp. 311-326
-
-
Barnes, E.M.1
Mead, G.C.2
Barnum, D.A.3
Harry, E.G.4
-
6
-
-
0000388524
-
Probiotics for chickens
-
(Fuller R, ed), Chapman & Hall, London
-
Barrow P (1992) Probiotics for chickens. Probiotics, The Scientific Basis (Fuller R, ed), pp. 225-257. Chapman & Hall, London.
-
(1992)
Probiotics, The Scientific Basis
, pp. 225-257
-
-
Barrow, P.1
-
7
-
-
0028126829
-
The phylogeny of the genus Clostridium: Proposal of five new genera and eleven new species combinations
-
Collins MD, Lawson PA, Willems A, Cordoba JJ, Fernandez-Garayzabal J, Garcia P, Cai J, Hippe H & Farrow JA (1994) The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int J Syst Bacteriol 44: 812-826.
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.9
-
8
-
-
0001831910
-
Toxicology of butyrate and short-chain fatty acids
-
(Hill MJ, ed), Taylor & Francis, London
-
Csordas A (1995) Toxicology of butyrate and short-chain fatty acids. Role of Gut Bacteria in Human Toxicology and Pharmacology (Hill MJ, ed), pp. 105-125. Taylor & Francis, London.
-
(1995)
Role of Gut Bacteria in Human Toxicology and Pharmacology
, pp. 105-125
-
-
Csordas, A.1
-
9
-
-
0025869974
-
Phylogenetic analysis of Aquaspirillum magnetotacticum using polymerase chain reaction-amplified 16S rRNA-specific DNA
-
Eden PA, Schmidt TM, Blakemore RP & Pace NR (1991) Phylogenetic analysis of Aquaspirillum magnetotacticum using polymerase chain reaction-amplified 16S rRNA-specific DNA. Int J Syst Bacteriol 41: 324-325.
-
(1991)
Int J Syst Bacteriol
, vol.41
, pp. 324-325
-
-
Eden, P.A.1
Schmidt, T.M.2
Blakemore, R.P.3
Pace, N.R.4
-
10
-
-
0029032318
-
Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species
-
Farrelly V, Rainey FA & Stackebrandt E (1995) Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl Environ Microbiol 61: 2798-2801.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2798-2801
-
-
Farrelly, V.1
Rainey, F.A.2
Stackebrandt, E.3
-
11
-
-
0000439013
-
Digestion and absorption of fat
-
(Boorman KN & Freeman BM, eds), British Poultry Science, Edinburgh
-
Freeman CP (1976) Digestion and absorption of fat. Digestion in the Fowl (Boorman KN & Freeman BM, eds), pp. 117-142. British Poultry Science, Edinburgh.
-
(1976)
Digestion in the Fowl
, pp. 117-142
-
-
Freeman, C.P.1
-
12
-
-
84987357807
-
Ecological studies on the Lactobacillus flora associated with the crop epithelium of the fowl
-
Fuller R (1973) Ecological studies on the Lactobacillus flora associated with the crop epithelium of the fowl. J Appl Bacteriol 36: 131-139.
-
(1973)
J Appl Bacteriol
, vol.36
, pp. 131-139
-
-
Fuller, R.1
-
13
-
-
0016659636
-
Nature of the determinant responsible for the adhesion of lactobacilli to chicken crop epithelial cells
-
Fuller R (1975) Nature of the determinant responsible for the adhesion of lactobacilli to chicken crop epithelial cells. J Gen Microbiol 87: 245-250.
-
(1975)
J Gen Microbiol
, vol.87
, pp. 245-250
-
-
Fuller, R.1
-
14
-
-
0017351007
-
The importance of Lactobacilli in maintaining normal microbial balance in the crop
-
Fuller R (1977) The importance of Lactobacilli in maintaining normal microbial balance in the crop. Br Poult Sci 18: 85-94.
-
(1977)
Br Poult Sci
, vol.18
, pp. 85-94
-
-
Fuller, R.1
-
15
-
-
0030464460
-
SEAVIEW and PHYLO_WIN: Two graphic tools for sequence alignment and molecular phylogeny
-
Galtier N, Gouy M & Gautier C (1996) SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12: 543-548.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 543-548
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
16
-
-
0037133369
-
Diversity and phylogenetic analysis of bacteria in the mucosa of chicken ceca and comparison with bacteria in the cecal lumen
-
Gong J, Forster RJ, Yu H, Chambers JR, Sabour PM, Wheatcroft R & Chen S (2002a) Diversity and phylogenetic analysis of bacteria in the mucosa of chicken ceca and comparison with bacteria in the cecal lumen. FEMS Microbiol Lett 208: 1-7.
-
(2002)
FEMS Microbiol Lett
, vol.208
, pp. 1-7
-
-
Gong, J.1
Forster, R.J.2
Yu, H.3
Chambers, J.R.4
Sabour, P.M.5
Wheatcroft, R.6
Chen, S.7
-
17
-
-
0036049862
-
Molecular analysis of bacterial populations in the ileum of broiler chickens and comparison with bacteria in the cecum
-
Gong J, Forster RJ, Yu H, Chambers JR, Wheatcroft R, Sabour PM & Chen S (2002b) Molecular analysis of bacterial populations in the ileum of broiler chickens and comparison with bacteria in the cecum. FEMS Microbiol Ecol 41: 171-179.
-
(2002)
FEMS Microbiol Ecol
, vol.41
, pp. 171-179
-
-
Gong, J.1
Forster, R.J.2
Yu, H.3
Chambers, J.R.4
Wheatcroft, R.5
Sabour, P.M.6
Chen, S.7
-
18
-
-
0242573212
-
Detection and identification of Lactobacillus species in crops of broilers of different ages by using PCR-denaturing gradient gel electrophoresis and amplified ribosomal DNA restriction analysis
-
Guan LL, Hagen KE, Tannock GW, Korver DR, Fasenko GM & Allison GE (2003) Detection and identification of Lactobacillus species in crops of broilers of different ages by using PCR-denaturing gradient gel electrophoresis and amplified ribosomal DNA restriction analysis. Appl Environ Microbiol 69: 6750-6757.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6750-6757
-
-
Guan, L.L.1
Hagen, K.E.2
Tannock, G.W.3
Korver, D.R.4
Fasenko, G.M.5
Allison, G.E.6
-
19
-
-
0242515761
-
Effects of dietary fat source and subtherapeutic levels of antibiotic on the bacterial community in the ileum of broiler chickens at various ages
-
Knarreborg A, Simon MA, Engberg RM, Jensen BB & Tannock GW (2002) Effects of dietary fat source and subtherapeutic levels of antibiotic on the bacterial community in the ileum of broiler chickens at various ages. Appl Environ Microbiol 68: 5918-5924.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5918-5924
-
-
Knarreborg, A.1
Simon, M.A.2
Engberg, R.M.3
Jensen, B.B.4
Tannock, G.W.5
-
20
-
-
0035992750
-
Phylogenetic analysis of cecal microbiota in chicken by the use of 16S rDNA clone libraries
-
Lan PTN, Hayashi H, Sakamoto M & Benno Y (2002) Phylogenetic analysis of cecal microbiota in chicken by the use of 16S rDNA clone libraries. Microbiol Immunol 46: 371-382.
-
(2002)
Microbiol Immunol
, vol.46
, pp. 371-382
-
-
Lan, P.T.N.1
Hayashi, H.2
Sakamoto, M.3
Benno, Y.4
-
21
-
-
0036154330
-
Culture-independent analysis of gut bacteria: The pig gastrointestinal tract microbiota revisited
-
Leser TD, Amenuvor JZ, Jensen TK, Lindecrona RH, Boye M & Moller K (2002) Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited. Appl Environ Microbiol 68: 673-690.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 673-690
-
-
Leser, T.D.1
Amenuvor, J.Z.2
Jensen, T.K.3
Lindecrona, R.H.4
Boye, M.5
Moller, K.6
-
22
-
-
84981839892
-
The gut flora of the chick. II. The establishment of the flora
-
Lev M & Briggs CAE (1956) The gut flora of the chick. II. The establishment of the flora. J Appl Bacteriol 19: 224-230.
-
(1956)
J Appl Bacteriol
, vol.19
, pp. 224-230
-
-
Lev, M.1
Briggs, C.A.E.2
-
23
-
-
0038066208
-
Evaluation of QIAamp DNA Stool Mini Kit for ecological studies of gut microbiota
-
Li M, Gong J, Cottrill M, Yu H, de Lange C, Burton J & Topp E (2003) Evaluation of QIAamp DNA Stool Mini Kit for ecological studies of gut microbiota. J Microbiol Methods 54: 13-20.
-
(2003)
J Microbiol Methods
, vol.54
, pp. 13-20
-
-
Li, M.1
Gong, J.2
Cottrill, M.3
Yu, H.4
De Lange, C.5
Burton, J.6
Topp, E.7
-
24
-
-
0242489005
-
Diversity and succession of the intestinal bacterial community of the maturing broiler chicken
-
Lu J, Idris U, Harmon B, Hofacre C, Maurer JJ & Lee MD (2003) Diversity and succession of the intestinal bacterial community of the maturing broiler chicken. Appl Environ Microbiol 69: 6816-6824.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6816-6824
-
-
Lu, J.1
Idris, U.2
Harmon, B.3
Hofacre, C.4
Maurer, J.J.5
Lee, M.D.6
-
25
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig W, Strunk O, Westram R et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
-
28
-
-
0035145056
-
Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning
-
Qiu X, Wu L, Huang H, McDonel PE, Palumbo AV, Tiedje JM & Zhou J (2001) Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning. Appl Environ Microbiol 67: 880-887.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 880-887
-
-
Qiu, X.1
Wu, L.2
Huang, H.3
McDonel, P.E.4
Palumbo, A.V.5
Tiedje, J.M.6
Zhou, J.7
-
29
-
-
0032935814
-
Conventional and molecular methods for understanding probiotic bacteria functionality in gastrointestinal tracts
-
Ricke SC & Pillai SD (1999) Conventional and molecular methods for understanding probiotic bacteria functionality in gastrointestinal tracts. Crit Rev Microbiol 25: 19-38.
-
(1999)
Crit Rev Microbiol
, vol.25
, pp. 19-38
-
-
Ricke, S.C.1
Pillai, S.D.2
-
30
-
-
0018875940
-
Glucose absorption and starch digestion in the intestine of the chicken
-
Riesenfeld G, Sklan D, Bar A, Eisner U & Hurwitz S (1980) Glucose absorption and starch digestion in the intestine of the chicken. J Nutr 110: 117-121.
-
(1980)
J Nutr
, vol.110
, pp. 117-121
-
-
Riesenfeld, G.1
Sklan, D.2
Bar, A.3
Eisner, U.4
Hurwitz, S.5
-
31
-
-
0016157155
-
Isolation, culture characteristics, and identification of anaerobic bacteria from the chicken cecum
-
Salanitro JP, Fairchilds IG & Zgornicki YD (1974) Isolation, culture characteristics, and identification of anaerobic bacteria from the chicken cecum. Appl Microbiol 27: 678-687.
-
(1974)
Appl Microbiol
, vol.27
, pp. 678-687
-
-
Salanitro, J.P.1
Fairchilds, I.G.2
Zgornicki, Y.D.3
-
32
-
-
0017873785
-
Bacteria isolated from the duodenum, ileum, and cecum of young chicks
-
Salanitro JP, Blake IG, Muirehead PA, Maglio M & Goodman JR (1978) Bacteria isolated from the duodenum, ileum, and cecum of young chicks. Appl Environ Microbiol 35: 782-790.
-
(1978)
Appl Environ Microbiol
, vol.35
, pp. 782-790
-
-
Salanitro, J.P.1
Blake, I.G.2
Muirehead, P.A.3
Maglio, M.4
Goodman, J.R.5
-
33
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD & Handelsman J (2005) Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-1506.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
34
-
-
0019314043
-
Digestion and absorption of casein at different dietary levels in the chick: Effect on fatty acid and bile acid absorption
-
Sklan D (1980) Digestion and absorption of casein at different dietary levels in the chick: effect on fatty acid and bile acid absorption. J Nutr 110: 989-994.
-
(1980)
J Nutr
, vol.110
, pp. 989-994
-
-
Sklan, D.1
-
35
-
-
13244284583
-
Mucin dynamics and microbial populations in chicken small intestine are changed by dietary probiotic and antibiotic growth promoter supplementation
-
Smirnov A, Perez R, Amit-Romach E, Sklan D & Uni Z (2005) Mucin dynamics and microbial populations in chicken small intestine are changed by dietary probiotic and antibiotic growth promoter supplementation. J Nutr 135: 187-192.
-
(2005)
J Nutr
, vol.135
, pp. 187-192
-
-
Smirnov, A.1
Perez, R.2
Amit-Romach, E.3
Sklan, D.4
Uni, Z.5
-
36
-
-
78651186423
-
Observations on the flora of alimentary tract of animals and factors affecting its composition
-
Smith HW (1965a) Observations on the flora of alimentary tract of animals and factors affecting its composition. J Pathol Bacteriol 89: 95-122.
-
(1965)
J Pathol Bacteriol
, vol.89
, pp. 95-122
-
-
Smith, H.W.1
-
37
-
-
0013806828
-
The development of the flora of the alimentary tract in young animals
-
Smith HW (1965b) The development of the flora of the alimentary tract in young animals. J Pathol Bacteriol 90: 495-513.
-
(1965)
J Pathol Bacteriol
, vol.90
, pp. 495-513
-
-
Smith, H.W.1
-
38
-
-
0028800208
-
Comparison of 16S rRNA sequences of segmented filamentous bacteria isolated from mice, rats, and chickens and proposal of "Candidatus Arthromitus"
-
Snel J, Heinen PP, Blok HJ, Carman RJ, Duncan AJ, Allen PC & Collins MD (1995) Comparison of 16S rRNA sequences of segmented filamentous bacteria isolated from mice, rats, and chickens and proposal of "Candidatus Arthromitus". Int J Syst Bacteriol 45: 780-782.
-
(1995)
Int J Syst Bacteriol
, vol.45
, pp. 780-782
-
-
Snel, J.1
Heinen, P.P.2
Blok, H.J.3
Carman, R.J.4
Duncan, A.J.5
Allen, P.C.6
Collins, M.D.7
-
39
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki MT & Giovannoni SJ (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 62: 625-630.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
40
-
-
0034035471
-
Molecular techniques for determining microbial diversity and community structure in natural environments
-
Theron J & Cloete TE (2000) Molecular techniques for determining microbial diversity and community structure in natural environments. Crit Rev Microbiol 26: 37-57.
-
(2000)
Crit Rev Microbiol
, vol.26
, pp. 37-57
-
-
Theron, J.1
Cloete, T.E.2
-
41
-
-
0036781558
-
Spatial and temporal variation of the intestinal bacterial community in commercially raised broiler chickens during growth
-
van der Wielen PW, Keuzenkamp DA, Lipman LJ, van Knapen F & Biesterveld S (2002) Spatial and temporal variation of the intestinal bacterial community in commercially raised broiler chickens during growth. Microb Ecol 44: 286-293.
-
(2002)
Microb Ecol
, vol.44
, pp. 286-293
-
-
Van Der Wielen, P.W.1
Keuzenkamp, D.A.2
Lipman, L.J.3
Van Knapen, F.4
Biesterveld, S.5
-
42
-
-
0031816030
-
Phylogenetic analysis of rumen bacteria by comparative sequence analysis of cloned 16S rRNA genes
-
Whitford MF, Forster RJ, Beard E, Gong J & Teather RM (1998) Phylogenetic analysis of rumen bacteria by comparative sequence analysis of cloned 16S rRNA genes. Anaerobe 4: 153-163.
-
(1998)
Anaerobe
, vol.4
, pp. 153-163
-
-
Whitford, M.F.1
Forster, R.J.2
Beard, E.3
Gong, J.4
Teather, R.M.5
-
43
-
-
0642310499
-
Composition of microbiota in content and mucus from cecae of broiler chickens as measured by fluorescent in situ hybridization with group-specific, 16S rRNA-targeted oligonucleotide probes
-
Zhu XY & Joerger RD (2003) Composition of microbiota in content and mucus from cecae of broiler chickens as measured by fluorescent in situ hybridization with group-specific, 16S rRNA-targeted oligonucleotide probes. Poult Sci 82: 1242-1249.
-
(2003)
Poult Sci
, vol.82
, pp. 1242-1249
-
-
Zhu, X.Y.1
Joerger, R.D.2
-
44
-
-
0036136459
-
16S rRNA-based analysis of microbiota from the cecum of broiler chickens
-
Zhu XY, Zhong T, Pandya Y & Joerger RD (2002) 16S rRNA-based analysis of microbiota from the cecum of broiler chickens. Appl Environ Microbiol 68: 124-137.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 124-137
-
-
Zhu, X.Y.1
Zhong, T.2
Pandya, Y.3
Joerger, R.D.4
|