메뉴 건너뛰기




Volumn 45, Issue D1, 2017, Pages D955-D963

PubChem BioAssay: 2017 update

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOASSAY; BIOBANK; BIOLOGICAL ACTIVITY; BIOTECHNOLOGY; CHEMICAL STRUCTURE; CLASSIFICATION; DATA ANALYSIS SOFTWARE; DATA BASE; DRUG DEVELOPMENT; GENE MAPPING; MEDICINAL CHEMISTRY; MOLECULAR GENETICS; RNA INTERFERENCE; SOFTWARE; CHEMICAL DATABASE; COMPUTER INTERFACE; DRUG EFFECTS; GENE EXPRESSION REGULATION; HUMAN; MOLECULAR LIBRARY; NUCLEIC ACID DATABASE; SEARCH ENGINE; WEB BROWSER;

EID: 85016152562     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkw1118     Document Type: Article
Times cited : (451)

References (38)
  • 4
    • 67849104638 scopus 로고    scopus 로고
    • PubChem: A public information system for analyzing bioactivities of small molecules
    • Wang, Y., Xiao, J., Suzek, T.O., Zhang, J., Wang, J. and Bryant, S.H. (2009) PubChem: a public information system for analyzing bioactivities of small molecules. Nucleic Acids Res., 37, W623-W633.
    • (2009) Nucleic Acids Res. , vol.37 , pp. W623-W633
    • Wang, Y.1    Xiao, J.2    Suzek, T.O.3    Zhang, J.4    Wang, J.5    Bryant, S.H.6
  • 5
    • 84910652816 scopus 로고    scopus 로고
    • PubChem applications in drug discovery: A bibliometric analysis
    • Cheng, T., Pan, Y., Hao, M., Wang, Y. and Bryant, S.H. (2014) PubChem applications in drug discovery: a bibliometric analysis. Drug Discov. Today, 19, 1751-1756.
    • (2014) Drug Discov. Today , vol.19 , pp. 1751-1756
    • Cheng, T.1    Pan, Y.2    Hao, M.3    Wang, Y.4    Bryant, S.H.5
  • 6
    • 84918538183 scopus 로고    scopus 로고
    • Peptide imprinted receptors for the determination of the small cell lung cancer associated biomarker progastrin releasing peptide
    • Qader, A.A., Urraca, J., Torsetnes, S.B., Tonnesen, F., Reubsaet, L. and Sellergren, B. (2014) Peptide imprinted receptors for the determination of the small cell lung cancer associated biomarker progastrin releasing peptide. J. Chromatogr. A, 1370, 56-62.
    • (2014) J. Chromatogr. A , vol.1370 , pp. 56-62
    • Qader, A.A.1    Urraca, J.2    Torsetnes, S.B.3    Tonnesen, F.4    Reubsaet, L.5    Sellergren, B.6
  • 7
    • 84908137021 scopus 로고    scopus 로고
    • Big data in chemical toxicity research: The use of high-throughput screening assays to identify potential toxicants
    • Zhu, H., Zhang, J., Kim, M.T., Boison, A., Sedykh, A. and Moran, K. (2014) Big data in chemical toxicity research: the use of high-throughput screening assays to identify potential toxicants. Chem. Res. Toxicol., 27, 1643-1651.
    • (2014) Chem. Res. Toxicol. , vol.27 , pp. 1643-1651
    • Zhu, H.1    Zhang, J.2    Kim, M.T.3    Boison, A.4    Sedykh, A.5    Moran, K.6
  • 10
    • 84929141895 scopus 로고    scopus 로고
    • PDB-wide collection of binding data: Current status of the PDBbind database
    • Liu, Z., Li, Y., Han, L., Li, J., Liu, J., Zhao, Z., Nie, W., Liu, Y. and Wang, R. (2015) PDB-wide collection of binding data: current status of the PDBbind database. Bioinformatics, 31, 405-412.
    • (2015) Bioinformatics , vol.31 , pp. 405-412
    • Liu, Z.1    Li, Y.2    Han, L.3    Li, J.4    Liu, J.5    Zhao, Z.6    Nie, W.7    Liu, Y.8    Wang, R.9
  • 12
    • 84976902303 scopus 로고    scopus 로고
    • BindingDB in 2015: A public database for medicinal chemistry, computational chemistry and systems pharmacology
    • Gilson, M.K., Liu, T., Baitaluk, M., Nicola, G., Hwang, L. and Chong, J. (2016) BindingDB in 2015: a public database for medicinal chemistry, computational chemistry and systems pharmacology. Nucleic Acids Res., 44, D1045-D1053.
    • (2016) Nucleic Acids Res. , vol.44 , pp. D1045-D1053
    • Gilson, M.K.1    Liu, T.2    Baitaluk, M.3    Nicola, G.4    Hwang, L.5    Chong, J.6
  • 14
    • 79959471969 scopus 로고    scopus 로고
    • BioAssay Ontology (BAO): A semantic description of bioassays and high-throughput screening results
    • Visser, U., Abeyruwan, S., Vempati, U., Smith, R.P., Lemmon, V. and Schurer, S.C. (2011) BioAssay Ontology (BAO): a semantic description of bioassays and high-throughput screening results. BMC Bioinformatics, 12, 257.
    • (2011) BMC Bioinformatics , vol.12 , pp. 257
    • Visser, U.1    Abeyruwan, S.2    Vempati, U.3    Smith, R.P.4    Lemmon, V.5    Schurer, S.C.6
  • 17
    • 84946549216 scopus 로고    scopus 로고
    • Identifcation of small-molecule inhibitors of the HuR/RNA interaction using a fuorescence polarization screening assay followed by NMR validation
    • Wang, Z., Bhattacharya, A. and Ivanov, D.N. (2015) Identifcation of small-molecule inhibitors of the HuR/RNA interaction using a fuorescence polarization screening assay followed by NMR validation. PloS One, 10, e0138780.
    • (2015) PloS One , vol.10 , pp. e0138780
    • Wang, Z.1    Bhattacharya, A.2    Ivanov, D.N.3
  • 18
    • 84983042856 scopus 로고    scopus 로고
    • The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic
    • Swenson, J.M., Colmenares, S.U., Strom, A.R., Costes, S.V. and Karpen, G.H. (2016) The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic. eLife, 5, e16096.
    • (2016) ELife , vol.5 , pp. e16096
    • Swenson, J.M.1    Colmenares, S.U.2    Strom, A.R.3    Costes, S.V.4    Karpen, G.H.5
  • 19
    • 84975879845 scopus 로고    scopus 로고
    • A high-throughput screening strategy to identify protein-protein interaction inhibitors that block the Fanconi Anemia DNA repair pathway
    • Voter, A.F., Manthei, K.A. and Keck, J.L. (2016) A high-throughput screening strategy to identify protein-protein interaction inhibitors that block the Fanconi Anemia DNA repair pathway. J. Biomol. Screen., 21, 626-633.
    • (2016) J. Biomol. Screen. , vol.21 , pp. 626-633
    • Voter, A.F.1    Manthei, K.A.2    Keck, J.L.3
  • 20
    • 84954504744 scopus 로고    scopus 로고
    • Comprehensive RNAi-based screening of human and mouse TLR pathways identifes species-specifc preferences in signaling protein use
    • Sun, J., Li, N., Oh, K.S., Dutta, B., Vayttaden, S.J., Lin, B., Ebert, T.S., De Nardo, D., Davis, J., Bagirzadeh, R. et al. (2016) Comprehensive RNAi-based screening of human and mouse TLR pathways identifes species-specifc preferences in signaling protein use. Science Signal., 9, ra3.
    • (2016) Science Signal. , vol.9 , pp. ra3
    • Sun, J.1    Li, N.2    Oh, K.S.3    Dutta, B.4    Vayttaden, S.J.5    Lin, B.6    Ebert, T.S.7    De Nardo, D.8    Davis, J.9    Bagirzadeh, R.10
  • 22
    • 84946485466 scopus 로고    scopus 로고
    • 6-Phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumour growth by inhibiting LKB1-AMPK signalling
    • Lin, R., Elf, S., Shan, C., Kang, H.B., Ji, Q., Zhou, L., Hitosugi, T., Zhang, L., Zhang, S., Seo, J.H. et al. (2015) 6-Phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumour growth by inhibiting LKB1-AMPK signalling. Nat. Cell Biol., 17, 1484-1496.
    • (2015) Nat. Cell Biol. , vol.17 , pp. 1484-1496
    • Lin, R.1    Elf, S.2    Shan, C.3    Kang, H.B.4    Ji, Q.5    Zhou, L.6    Hitosugi, T.7    Zhang, L.8    Zhang, S.9    Seo, J.H.10
  • 24
    • 84937726616 scopus 로고    scopus 로고
    • Internal ribosome entry site-based bicistronic in situ reporter assays for discovery of transcription-targeted lead compounds
    • Lang, L., Ding, H.F., Chen, X., Sun, S.Y., Liu, G. and Yan, C. (2015) Internal ribosome entry site-based bicistronic in situ reporter assays for discovery of transcription-targeted lead compounds. Chem. Biol., 22, 957-964.
    • (2015) Chem. Biol. , vol.22 , pp. 957-964
    • Lang, L.1    Ding, H.F.2    Chen, X.3    Sun, S.Y.4    Liu, G.5    Yan, C.6
  • 27
    • 84924353446 scopus 로고    scopus 로고
    • Whole-genome RNAi screen highlights components of the endoplasmic reticulum/Golgi as a source of resistance to immunotoxin-mediated cytotoxicity
    • Pasetto, M., Antignani, A., Ormanoglu, P., Buehler, E., Guha, R., Pastan, I., Martin, S.E. and FitzGerald, D.J. (2015) Whole-genome RNAi screen highlights components of the endoplasmic reticulum/Golgi as a source of resistance to immunotoxin-mediated cytotoxicity. Proc. Natl. Acad. Sci. U.S.A., 112, E1135-E1142.
    • (2015) Proc. Natl. Acad. Sci. U.S.A. , vol.112 , pp. E1135-E1142
    • Pasetto, M.1    Antignani, A.2    Ormanoglu, P.3    Buehler, E.4    Guha, R.5    Pastan, I.6    Martin, S.E.7    Fitzgerald, D.J.8
  • 31
    • 84900422297 scopus 로고    scopus 로고
    • Marine natural products acting on the acetylcholine-binding protein and nicotinic receptors: From computer modeling to binding studies and electrophysiology
    • Kudryavtsev, D., Makarieva, T., Utkina, N., Santalova, E., Kryukova, E., Methfessel, C., Tsetlin, V., Stonik, V. and Kasheverov, I. (2014) Marine natural products acting on the acetylcholine-binding protein and nicotinic receptors: from computer modeling to binding studies and electrophysiology. Marine Drugs, 12, 1859-1875.
    • (2014) Marine Drugs , vol.12 , pp. 1859-1875
    • Kudryavtsev, D.1    Makarieva, T.2    Utkina, N.3    Santalova, E.4    Kryukova, E.5    Methfessel, C.6    Tsetlin, V.7    Stonik, V.8    Kasheverov, I.9
  • 34
    • 84959396270 scopus 로고    scopus 로고
    • Genome-wide functional genomic and transcriptomic analyses for genes regulating sensitivity to vorinostat
    • Falkenberg, K.J., Gould, C.M., Johnstone, R.W. and Simpson, K.J. (2014) Genome-wide functional genomic and transcriptomic analyses for genes regulating sensitivity to vorinostat. Sci. Data, 1, 140017.
    • (2014) Sci. Data , vol.1 , pp. 140017
    • Falkenberg, K.J.1    Gould, C.M.2    Johnstone, R.W.3    Simpson, K.J.4
  • 38
    • 84979859211 scopus 로고    scopus 로고
    • PUG-SOAP and PUG-REST: Web services for programmatic access to chemical information in PubChem
    • Kim, S., Thiessen, P.A., Bolton, E.E. and Bryant, S.H. (2015) PUG-SOAP and PUG-REST: web services for programmatic access to chemical information in PubChem. Nucleic Acids Res., 43, W605-W611.
    • (2015) Nucleic Acids Res. , vol.43 , pp. W605-W611
    • Kim, S.1    Thiessen, P.A.2    Bolton, E.E.3    Bryant, S.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.