A novel application potential of GH6 cellobiohydrolase ctcel6 from thermophilic Chaetomium thermophilum for gene cloning, heterologous expression and biological characterization

International Journal of Agriculture and Biology

Volumn 19, Issue 2, 2017, Pages 355-362

  Zhou, Qinzheng ^a   Jia, Jianchao ^a   Ji, Peng ^a   Han, Chao ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

Bioconversion; Cellobiohydrolase; Glycoside hydrolase family 6; Heterologous expression; Thermostable enzyme

Indexed keywords

EID: 85014825176     PISSN: 15608530     EISSN: 18149596     Source Type: Journal    
DOI: 10.17957/IJAB/15.0290     Document Type: Article

References (35)

1. Aditya, B., M.B. Kenneth, U. Nirmal, B. Venkatesh and K.S. Rajesh, 2014. Novel thermostable endo-xylanase cloned and expressed from bacterium Geobacillus sp. WSUCF1. Bioresour. Technol., 165: 314-318
2. Ali, I., R. Asghar, S. Ahmed, M. Sajjad, M. Tariq and M. Waheed Akhtar, 2015. mRNA secondary structure engineering of Thermobifida fusca endoglucanase (Cel6A) for enhanced expression in Escherichia coli. World. J. Microbiol. Biotechnol., 31: 499-506
3. Amlacher, S., P. Sarges, D. Flemming, V. van Noort, R. Kunze, D.P. Devos, M. Arumugam, P. Bork and E. Hurt, 2011. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Cell, 146: 277-289
4. Baramee, S., T. Teeravivattanakit, P. Phitsuwan, R. Waeonukul, P. Pason, C. Tachaapaikoon, A. Kosugi, K. Sakka and K. Ratanakhanokchai, 2016. A novel GH6 cellobiohydrolase from Paenibacillus curdlanolyticus B-6 and its synergistic action on cellulose degradation. Appl. Microbiol. Biotechnol., DOI: 10.1007/s00253-016-7895-8
5. Cantarel, B.L., P.M. Coutinho, C. Rancurel, T. Bernard, V. Lombard and B. Henrissat, 2009. The Carbohydrate-Active EnZymes database (CAZy): An expert resource for glycogenomics. Nucleic Acids. Res., 37: D233-D238
6. Chen, X.L., T. Shi, J. Yang, W. Shi, X.S. Gao, D. Chen, X.W. Xu, J.R. Xu, N.J. Talbot and Y.L. Peng, 2014. N-glycosylation of effector proteins by an α-1,3-mannosyltransferase is required for the rice blast fungus to evade host innate immunity. Plant Cell, 26: 1360-1376
7. Formighieri, C. and A. Melis, 2016. Sustainable heterologous production of terpene hydrocarbons in cyanobacteria. Photosynth. Res. Dec., 130: 123-135
8. Haq, I., F. Akram, M.A. Khan, Z. Hussain, A. Nawaz, K. Iqbal and A.J. Shah, 2015. CenC, a multidomain thermostable GH9 processive endoglucanase from Clostridium thermocellum: cloning, characterization and saccharification studies. World. J. Microbiol. Biotechnol., 31: 1699-1710
9. Hong, J., H. Tamaki, K. Yamamoto and H. Kumagai, 2003. Cloning of a gene encoding thermostable cellobiohydrolase from Thermoascus aurantiacus and its expression in yeast. Appl. Microbiol. Biotechnol., 63: 42-50
10. Huy, N.D., C.L. Nguyen, H.S. Park, N.H. Loc, M.S. Choi, D.H. Kim, J.W. Seo and S.M. Park, 2016. Characterization of a novel manganese dependent endoglucanase belongs in GH family 5 from Phanerochaete chrysosporium. J. Biosci. Bioeng., 121: 154-159
11. Kim, do Y., M.J. Lee, H.Y. Cho, J.S. Lee, M.H. Lee, C.W. Chung, D.H. Shin, Y.H. Rhee, K.H. Son and H.Y. Park, 2016. Genetic and functional characterization of an extracellular modular GH6 endo-β-1,4-glucanase from an earthworm symbiont, Cellulosimicrobium funkei HY-13. Antonie. Van. Leeuwenhoek., 109: 1-12
12. Li, D.C., A.N. Li and A.C. Papageorgiou, 2011. Cellulases from thermophilic fungi: recent insights and biotechnological potential. Enzyme. Res., 2011: 308-730
13. Li, H.B., Y.H. C, L.W. Zhang, X.Y. Hua, H. Xue, H.J. Yue, D. Ming, B.F. Rong and S. Zhang, 2014. Heterologous expression and purification of Zea mays transglutaminase in Pichia pastoris. Food. Sci. Biotechnol., 23: 1507-1513
14. Li, Y.L., H. Li, A.N. Li and D.C. Li, 2009. Cloning of a gene encoding thermostable cellobiohydrolase from the thermophilic fungus Chaetomium thermophilum and its expression in Pichia pastoris. J. Appl. Microbiol., 106: 1867-1875
15. Lynd, L.R., P.J. Weimer, W.H. van Zyl and I.S. Pretorius, 2002. Microbial cellulose utilization: fundamentals and biotechnology. Microbiol. Mol. Biol. Rev., 66: 506-577
16. Margeot, A., B. Hahn-Hagerdal, M. Edlund, R. Slade and F. Monot, 2009. New improvements for lignocellulosic ethanol. Curr. Opin. Biotechnol., 20: 372-380
17. Miller, G.L., 1959. Use of dinitrosalicylic reagent for determination of reducing sugar. Anal. Chem., 31: 426-428
18. Papageorgiou, A.C. and D. Li, 2015. Expression, purification and crystallization of a family 55 β-1,3-glucanase from Chaetomium thermophilum. Acta. Cryst. F., 71: 680-683
19. Qin, Y.L., H.Y. He, N. Li, M. Ling and Z.Q. Liang, 2010. Isolation and characterization of a thermostable cellulase-producing Fusarium chlamydosporum. World. J. Microbiol. Biotechnol., 26: 1991-1997
20. Ragauskas, A.J., C.K. Williams, B.H. Davison, G. Britovsek, J. Cairney, C.A. Eckert, W.J. Jr. Frederick, J.P. Hallett, D.J. Leak, C.L. Liotta, J.R. Mielenz, R. Murphy, R. Templer and T. Tschaplinski, 2006. The path forward for biofuels and biomaterials. Science, 311: 484-489
21. Ramani, G., B. Meera, C. Vanitha, J. Rajendhran and P. Gunasekaran, 2015. Molecular cloning and expression of thermostable glucose-tolerant β-glucosidase of Penicillium funiculosum NCL1 in Pichia pastoris and its characterization. J. Ind. Microbiol. Biotechnol. Apr., 42: 553-565
22. Sánchez, C., 2009. Lignocellulosic residues: biodegradation and bioconversion by fungi. Biotechnol. Adv., 27: 185-194
23. Shi, H., Y. Zhang, H. Zhong, Y.J. Huang, X. Li and F. Wang, 2014. Cloning, over-expression and characterization of a thermotolerant xylanase from Thermotoga thermarum. Biotechnol. Lett., 36: 587-593
24. Song, J.Z., B.D. Liu, Z.H Liu and Q. Yang, 2010. Cloning of two cellobiohydrolase genes from Trichoderma viride and heterogenous expression in yeast Saccharomyces cerevisiae. Mol. Biol. Rep., 37: 2135-2140
25. Takashima, S., M. Ohono, M. Hidaka, A. Nakamura, H. Masaki and T. Uozumi, 2007. Correlation between cellulose binding and activity of cellulose-binding domain mutants of Humicola grisea cellobiohydrolase. FEBS. Lett., 581: 5891-5896
26. Tao, L, Z.M. Zhang and C. Zhang, 2014. Glycosyl rotation and distortion by key residues in endocellulase Cel6A from Theromobifida fusca. Glycobiology, 24: 247-251
27. Thompson, A.J., T. Heu, T. Shaghasi, R. Benyamino, A. Jones, E.P. Friis, K.S. Wilson and G.J. Davies, 2012. Structure of the catalytic core module of the Chaetomium thermophilum family GH6 cellobiohydrolase Cel6A. Acta. Crystallogr. D Biol. Crystallogr., 68: 875-882
28. Villatte, F., A. Hussein, T. Bachmann and R. Schmid, 2001. Expression level of heterologous proteins in Pichia pastoris is influenced by flask design. Appl. Microbiol. Biotechnol., 55: 463-465
29. Wang, H.C., Y.C. Chen, C.T. Huang and R.S. Hseu, 2013. Cloning and characterization of a thermostable and pH-stable cellobiohydrolase from Neocallimastix patriciarum J11. Protein. Exp. Purif., 90: 153-159
30. Wood, T.M., 1988. Preparation of crystalline, amorphous, and dyed cellulase substrates. Methods. Enzymol., 160: 19-25
31. Woon, J.S., M.M. Mackeen, A.H. Sudin, N.M. Mahadi, R.M. Illias, A.M. Murad and F.D. Bakar, 2016. Erratum to: Production of an oligosaccharide-specific cellobiohydrolase from the thermophilic fungus Thielavia terrestris. Biotechnol. Lett., 38: 825-832
32. Xu, R., F. Teng, C. Zhang and D. Li, 2011. Cloning of a gene encoding β-glucosidase from Chaetomium thermophilum CT2 and its expression in Pichia pastoris. J. Mol. Microbiol. Biotechnol., 20: 16-23
33. Yin, Y.R., F. Zhang, Q.W. Hu, W.D. Xian, W.N. Hozzein, E.M. Zhou, H. Ming and G.X. Nie, 2015. Heterologous expression and characterization of a novel halotolerant, thermostable, and alkali-stable GH6 endoglucanase from Thermobifida halotolerans. Biotechnol. Lett., 37: 857-862
34. Zhang, S., B.K. Barr and D.B. Wilson, 2000. Effects of noncatalytic residue mutations on substrate specificity and ligand binding of Thermobifida fusca endocellulase Cel6A. Eur. J. Biochem., 267: 244-252
35. Zhao, J.Q., C. Guo, C.G. Tian and Y.H. Ma, 2015. Heterologous expression and characterization of a GH3 β-glucosidase from thermophilic fungi Myceliophthora thermophila in Pichia pastoris. Appl. Biochem. Biotechnol., 177: 511-527