메뉴 건너뛰기




Volumn 964, Issue , 2017, Pages 45-54

Evaluation of ensemble Monte Carlo variable selection for identification of metabolite markers on NMR data

Author keywords

Enhanced Monte Carlo variable selection; NMR; PLS; Variable selection

Indexed keywords

BIOMOLECULES; CHEMICAL SHIFT; FUNGI; METABOLITES; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PALMPRINT RECOGNITION; WINE;

EID: 85013053135     PISSN: 00032670     EISSN: 18734324     Source Type: Journal    
DOI: 10.1016/j.aca.2017.01.027     Document Type: Article
Times cited : (10)

References (24)
  • 1
    • 44949181010 scopus 로고    scopus 로고
    • 1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues
    • 1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues. Nat. Protoc. 3 (2008), 1001–1012.
    • (2008) Nat. Protoc. , vol.3 , pp. 1001-1012
    • Kruger, N.J.1    Troncoso-Ponce, M.A.2    Ratcliffe, R.G.3
  • 4
    • 77951626608 scopus 로고    scopus 로고
    • Study of the suitability of HRMAS NMR for metabolic profiling of tomatoes: application to tissue differentiation and fruit ripening
    • [4] Pérez, E.M.S., Iglesias, M.J., Ortiz, F.L., Pérez, I.S., Galera, M.M., Study of the suitability of HRMAS NMR for metabolic profiling of tomatoes: application to tissue differentiation and fruit ripening. Food Chem. 122 (2010), 877–887.
    • (2010) Food Chem. , vol.122 , pp. 877-887
    • Pérez, E.M.S.1    Iglesias, M.J.2    Ortiz, F.L.3    Pérez, I.S.4    Galera, M.M.5
  • 8
    • 84855732698 scopus 로고    scopus 로고
    • Metabolic signatures of cancer unveiled by NMR spectroscopy of human biofluids
    • [8] Duarte, I.F., Gil, A.M., Metabolic signatures of cancer unveiled by NMR spectroscopy of human biofluids. Prog. Nucl. Magn. Reson. Spectrosc. 62 (2012), 51–74.
    • (2012) Prog. Nucl. Magn. Reson. Spectrosc. , vol.62 , pp. 51-74
    • Duarte, I.F.1    Gil, A.M.2
  • 9
    • 84856033328 scopus 로고    scopus 로고
    • Selection of variables based on most stable normalised partial least squares regression coefficients in an ensemble Monte Carlo procedure
    • [9] Esquerre, C., Gowen, A.A., Downey, G., O'Donnell, C.P., Selection of variables based on most stable normalised partial least squares regression coefficients in an ensemble Monte Carlo procedure. J. Near Infrared Spectrosc. 19 (2011), 443–450.
    • (2011) J. Near Infrared Spectrosc. , vol.19 , pp. 443-450
    • Esquerre, C.1    Gowen, A.A.2    Downey, G.3    O'Donnell, C.P.4
  • 12
    • 77954355416 scopus 로고    scopus 로고
    • Interpretation of partial least squares regression models by means of target projection and selectivity ratio plots
    • [12] Kvalheim, O.M., Interpretation of partial least squares regression models by means of target projection and selectivity ratio plots. J. Chemom. 24 (2010), 496–504.
    • (2010) J. Chemom. , vol.24 , pp. 496-504
    • Kvalheim, O.M.1
  • 13
    • 64849110688 scopus 로고    scopus 로고
    • Discriminating variable test and selectivity ratio plot: quantitative tools for interpretation and variable (biomarker) selection in complex spectral or chromatographic profiles
    • [13] Rajalahti, T., Arneberg, R., Kroksveen, A.C., Berle, M., Myhr, K.-M., Kvalheim, O.M., Discriminating variable test and selectivity ratio plot: quantitative tools for interpretation and variable (biomarker) selection in complex spectral or chromatographic profiles. Anal. Chem. 81 (2009), 2581–2590.
    • (2009) Anal. Chem. , vol.81 , pp. 2581-2590
    • Rajalahti, T.1    Arneberg, R.2    Kroksveen, A.C.3    Berle, M.4    Myhr, K.-M.5    Kvalheim, O.M.6
  • 14
    • 84906770741 scopus 로고    scopus 로고
    • Interpretation of variable importance in partial least squares with significance multivariate correlation (sMC)
    • [14] Tran, T.N., Afanador, N.L., Buydens, L.M.C., Blanchet, L., Interpretation of variable importance in partial least squares with significance multivariate correlation (sMC). Chemom. Intell. Lab. Syst. 138 (2014), 153–160.
    • (2014) Chemom. Intell. Lab. Syst. , vol.138 , pp. 153-160
    • Tran, T.N.1    Afanador, N.L.2    Buydens, L.M.C.3    Blanchet, L.4
  • 15
    • 79952134208 scopus 로고    scopus 로고
    • Preventing over-fitting in PLS calibration models of near-infrared (NIR) spectroscopy data using regression coefficients
    • [15] Gowen, A.A., Downey, G., Esquerre, C., O'Donnell, C.P., Preventing over-fitting in PLS calibration models of near-infrared (NIR) spectroscopy data using regression coefficients. J. Chemom. 25 (2011), 375–381.
    • (2011) J. Chemom. , vol.25 , pp. 375-381
    • Gowen, A.A.1    Downey, G.2    Esquerre, C.3    O'Donnell, C.P.4
  • 16
    • 70350356261 scopus 로고    scopus 로고
    • A comparison of nine PLS1 algorithms
    • [16] Andersson, M., A comparison of nine PLS1 algorithms. J. Chemom. 23 (2009), 518–529.
    • (2009) J. Chemom. , vol.23 , pp. 518-529
    • Andersson, M.1
  • 17
    • 0031998121 scopus 로고    scopus 로고
    • Machine learning for the detection of oil spills in satellite radar images
    • [17] Kubat, M., Holte, R.C., Matwin, S., Machine learning for the detection of oil spills in satellite radar images. Mach. Learn. 30 (1998), 195–215.
    • (1998) Mach. Learn. , vol.30 , pp. 195-215
    • Kubat, M.1    Holte, R.C.2    Matwin, S.3
  • 18
    • 0003188418 scopus 로고    scopus 로고
    • Theoretical justification of wavelength selection in PLS calibration: development of a new algorithm
    • [18] Spiegelman, C.H., McShane, M.J., Goetz, M., Motamedi, M., Yue, Q., Cote, G., Theoretical justification of wavelength selection in PLS calibration: development of a new algorithm. Anal. Chem. 70 (1998), 35–44.
    • (1998) Anal. Chem. , vol.70 , pp. 35-44
    • Spiegelman, C.H.1    McShane, M.J.2    Goetz, M.3    Motamedi, M.4    Yue, Q.5    Cote, G.6
  • 19
    • 84867861125 scopus 로고    scopus 로고
    • Wavelength selection for development of a near infrared imaging system for early detection of bruise damage in mushrooms (Agaricus bisporus)
    • [19] Esquerre, C., Gowen, A., Downey, G., O'Donnell, C., Wavelength selection for development of a near infrared imaging system for early detection of bruise damage in mushrooms (Agaricus bisporus). J. Near Infrared Spectrosc. 20 (2012), 537–546.
    • (2012) J. Near Infrared Spectrosc. , vol.20 , pp. 537-546
    • Esquerre, C.1    Gowen, A.2    Downey, G.3    O'Donnell, C.4
  • 20
  • 21
    • 34248388135 scopus 로고    scopus 로고
    • An exploratory chemometric study of 1H NMR spectra of table wines
    • [21] Larsen, F.H., van den Berg, F., Engelsen, S.B., An exploratory chemometric study of 1H NMR spectra of table wines. J. Chemom. 20 (2006), 198–208.
    • (2006) J. Chemom. , vol.20 , pp. 198-208
    • Larsen, F.H.1    van den Berg, F.2    Engelsen, S.B.3
  • 22
    • 61849095791 scopus 로고
    • Use of a simple reflectometer to test mushroom quality
    • [22] Gormley, T.R., O'Sullivan, L., Use of a simple reflectometer to test mushroom quality. Mushroom J. 34 (1975), 344–346.
    • (1975) Mushroom J. , vol.34 , pp. 344-346
    • Gormley, T.R.1    O'Sullivan, L.2
  • 24
    • 84938151431 scopus 로고    scopus 로고
    • Classification of red wines using suitable markers coupled with multivariate statistic analysis
    • [24] Geana, E.I., Popescu, R., Costinel, D., Dinca, O.R., Ionete, R.E., Stefanescu, I., Artem, V., Bala, C., Classification of red wines using suitable markers coupled with multivariate statistic analysis. Food Chem. 192 (2016), 1015–1024.
    • (2016) Food Chem. , vol.192 , pp. 1015-1024
    • Geana, E.I.1    Popescu, R.2    Costinel, D.3    Dinca, O.R.4    Ionete, R.E.5    Stefanescu, I.6    Artem, V.7    Bala, C.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.