-
1
-
-
0033025239
-
Ferritin mutants of Escherichia coli are iron deficient and growth impaired, and fur mutants are iron deficient
-
Abdul-Tehrani, H., Hudson, A. J., Chang, Y. S., Timms, A. R., Hawkins, C., Williams, J. M., et al. (1999). Ferritin mutants of Escherichia coli are iron deficient and growth impaired, and fur mutants are iron deficient. J. Bacteriol. 181, 1415-1428.
-
(1999)
J. Bacteriol
, vol.181
, pp. 1415-1428
-
-
Abdul-Tehrani, H.1
Hudson, A.J.2
Chang, Y.S.3
Timms, A.R.4
Hawkins, C.5
Williams, J.M.6
-
2
-
-
51949096025
-
Global gene expression as a function of the iron status of the bacterial cell: influence of differentially expressed genes in the virulence of the human pathogen Vibrio vulnificus
-
Alice, A. F., Naka, H., and Crosa, J. H. (2008). Global gene expression as a function of the iron status of the bacterial cell: influence of differentially expressed genes in the virulence of the human pathogen Vibrio vulnificus. Infect. Immun. 76, 4019-4037. doi: 10.1128/IAI.00208-08
-
(2008)
Infect. Immun
, vol.76
, pp. 4019-4037
-
-
Alice, A.F.1
Naka, H.2
Crosa, J.H.3
-
3
-
-
84955726279
-
Genetics of natural competence in Vibrio cholerae and other Vibrios
-
Antonova, E. S., and Hammer, B. K. (2015). Genetics of natural competence in Vibrio cholerae and other Vibrios. Microbiol. Spectr. 3, 1-18. doi: 10.1128/microbiolspec.VE-0010-2014
-
(2015)
Microbiol. Spectr
, vol.3
, pp. 1-18
-
-
Antonova, E.S.1
Hammer, B.K.2
-
4
-
-
34247169597
-
CsrB sRNA family: sequestration of RNA-binding regulatory proteins
-
Babitzke, P., and Romeo, T. (2007). CsrB sRNA family: sequestration of RNA-binding regulatory proteins. Curr. Opin. Microbiol. 10, 156-163. doi: 10.1016/j.mib.2007.03.007
-
(2007)
Curr. Opin. Microbiol
, vol.10
, pp. 156-163
-
-
Babitzke, P.1
Romeo, T.2
-
5
-
-
0023576859
-
Molecular mechanism of regulation of siderophore-mediated iron assimilation
-
Bagg, A., and Neilands, J. B. (1987). Molecular mechanism of regulation of siderophore-mediated iron assimilation. Microbiol. Rev. 51, 509-518.
-
(1987)
Microbiol. Rev
, vol.51
, pp. 509-518
-
-
Bagg, A.1
Neilands, J.B.2
-
6
-
-
84860764110
-
Non-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae
-
Bardill, J. P., and Hammer, B. K. (2012). Non-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae. RNA Biol. 9, 392-401. doi: 10.4161/rna.19975
-
(2012)
RNA Biol
, vol.9
, pp. 392-401
-
-
Bardill, J.P.1
Hammer, B.K.2
-
7
-
-
34047118522
-
CRISPR provides acquired resistance against viruses in prokaryotes
-
Barrangou, R., Fremaux, C., Deveau, H., Richards, M., Boyaval, P., Moineau, S., et al. (2007). CRISPR provides acquired resistance against viruses in prokaryotes. Science 315, 1709-1712. doi: 10.1126/science.1138140
-
(2007)
Science
, vol.315
, pp. 1709-1712
-
-
Barrangou, R.1
Fremaux, C.2
Deveau, H.3
Richards, M.4
Boyaval, P.5
Moineau, S.6
-
8
-
-
84886786285
-
The RNA chaperone Hfq is required for virulence of bordetella pertussis
-
Bibova, I., Skopova, K., Masin, J., Cerny, O., Hot, D., Sebo, P., et al. (2013). The RNA chaperone Hfq is required for virulence of bordetella pertussis. Infect. Immun. 81, 4081-4090. doi: 10.1128/IAI.00345-13
-
(2013)
Infect. Immun
, vol.81
, pp. 4081-4090
-
-
Bibova, I.1
Skopova, K.2
Masin, J.3
Cerny, O.4
Hot, D.5
Sebo, P.6
-
9
-
-
79960967875
-
A genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio cholerae
-
Bradley, E. S., Bodi, K., Ismail, A. M., and Camilli, A. (2011). A genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio cholerae. PLoS Pathog. 7:e1002126. doi: 10.1371/journal.ppat.1002126
-
(2011)
PLoS Pathog
, vol.7
-
-
Bradley, E.S.1
Bodi, K.2
Ismail, A.M.3
Camilli, A.4
-
10
-
-
84930654284
-
OpaR controls a network of downstream transcription factors in Vibrio parahaemolyticus BB22OP
-
Burke, A. K., Guthrie, L. T. C., Modise, T., Cormier, G., Jensen, R. V., McCarter, L. L., et al. (2015). OpaR controls a network of downstream transcription factors in Vibrio parahaemolyticus BB22OP. PLoS ONE 10:e0121863. doi: 10.1371/journal.pone.0121863
-
(2015)
PLoS ONE
, vol.10
-
-
Burke, A.K.1
Guthrie, L.T.C.2
Modise, T.3
Cormier, G.4
Jensen, R.V.5
McCarter, L.L.6
-
11
-
-
85012012416
-
Single nucleotide polymorphisms in regulator-encoding genes have an additive effect on virulence gene expression in a Vibrio cholerae clinical isolate
-
Carignan, B. M., Brumfield, K. D., and Son, M. S. (2016). Single nucleotide polymorphisms in regulator-encoding genes have an additive effect on virulence gene expression in a Vibrio cholerae clinical isolate. mSphere 1, e253-e216. doi: 10.1128/mSphere.00253-16.Editor
-
(2016)
mSphere
, vol.1
, pp. e253-e266
-
-
Carignan, B.M.1
Brumfield, K.D.2
Son, M.S.3
-
12
-
-
84897920295
-
Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors
-
Ceccarelli, D., Hasan, N. A., Huq, A., and Colwell, R. R. (2013). Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors. Front. Cell. Infect. Microbiol. 3:97. doi: 10.3389/fcimb.2013.00097
-
(2013)
Front. Cell. Infect. Microbiol
, vol.3
, pp. 97
-
-
Ceccarelli, D.1
Hasan, N.A.2
Huq, A.3
Colwell, R.R.4
-
13
-
-
84928262419
-
A cis-regulatory antisense RNA represses translation in Vibrio cholerae through extensive complementarity and proximity to the target locus
-
Chang, H., Replogle, J. M., Vather, N., Tsao-Wu, M., Mistry, R., and Liu, J. M. (2015). A cis-regulatory antisense RNA represses translation in Vibrio cholerae through extensive complementarity and proximity to the target locus. RNA Biol. 12, 136-148. doi: 10.1080/15476286.2015.1017203
-
(2015)
RNA Biol
, vol.12
, pp. 136-148
-
-
Chang, H.1
Replogle, J.M.2
Vather, N.3
Tsao-Wu, M.4
Mistry, R.5
Liu, J.M.6
-
14
-
-
84930369336
-
Vibrio cholerae response regulator VxrB controls colonization and regulates the Type VI secretion system
-
Cheng, A. T., Ottemann, K. M., and Yildiz, F. H. (2015). Vibrio cholerae response regulator VxrB controls colonization and regulates the Type VI secretion system. PLoS Pathog. 11:e1004933. doi: 10.1371/journal.ppat.1004933
-
(2015)
PLoS Pathog
, vol.11
-
-
Cheng, A.T.1
Ottemann, K.M.2
Yildiz, F.H.3
-
15
-
-
79960288286
-
Impact of Hfq on global gene expression and virulence in Klebsiella pneumoniae
-
Chiang, M. K., Lu, M. C., Liu, L. C., Lin, C. T., and Lai, Y. C. (2011). Impact of Hfq on global gene expression and virulence in Klebsiella pneumoniae. PLoS ONE 6:e22248. doi: 10.1371/journal.pone.0022248
-
(2011)
PLoS ONE
, vol.6
-
-
Chiang, M.K.1
Lu, M.C.2
Liu, L.C.3
Lin, C.T.4
Lai, Y.C.5
-
16
-
-
79953182739
-
Identification of novel ligands for thiamine pyrophosphate (TPP) riboswitches
-
Cressina, E., Chen, L., Moulin, M., Leeper, F. J., Abell, C., and Smith, A. G. (2011). Identification of novel ligands for thiamine pyrophosphate (TPP) riboswitches. Biochem. Soc. Trans. 39, 652-657. doi: 10.1042/BST0390652
-
(2011)
Biochem. Soc. Trans
, vol.39
, pp. 652-657
-
-
Cressina, E.1
Chen, L.2
Moulin, M.3
Leeper, F.J.4
Abell, C.5
Smith, A.G.6
-
17
-
-
84859754930
-
Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. cholerae virulence
-
Davies, B. W., Bogard, R. W., Young, T. S., and Mekalanos, J. J. (2012). Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. cholerae virulence. Cell 149, 358-370. doi: 10.1016/j.cell.2012.01.053
-
(2012)
Cell
, vol.149
, pp. 358-370
-
-
Davies, B.W.1
Bogard, R.W.2
Young, T.S.3
Mekalanos, J.J.4
-
18
-
-
20444473805
-
Characterization of the small untranslated RNA RyhB and its regulon in Vibrio cholerae
-
Davis, B. M., Quinones, M., Pratt, J., Ding, Y., and Waldor, M. K. (2005). Characterization of the small untranslated RNA RyhB and its regulon in Vibrio cholerae. J. Bacteriol. 187, 4005-4014. doi: 10.1128/JB.187.12.4005-4014.2005
-
(2005)
J. Bacteriol
, vol.187
, pp. 4005-4014
-
-
Davis, B.M.1
Quinones, M.2
Pratt, J.3
Ding, Y.4
Waldor, M.K.5
-
19
-
-
34447328708
-
RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA
-
Davis, B. M., and Waldor, M. K. (2007). RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA. Mol. Microbiol. 65, 373-385. doi: 10.1111/j.1365-2958.2007.05796.x
-
(2007)
Mol. Microbiol
, vol.65
, pp. 373-385
-
-
Davis, B.M.1
Waldor, M.K.2
-
20
-
-
84991735970
-
The RNA chaperone Hfq is involved in colony morphology, nutrient utilization and oxidative and envelope stress response in Vibrio alginolyticus
-
Deng, Y., Chen, C., Zhao, Z., Zhao, J., Jacq, A., Huang, X., et al. (2016). The RNA chaperone Hfq is involved in colony morphology, nutrient utilization and oxidative and envelope stress response in Vibrio alginolyticus. PLoS ONE 11:e0163689. doi: 10.1371/journal.pone.0163689
-
(2016)
PLoS ONE
, vol.11
-
-
Deng, Y.1
Chen, C.2
Zhao, Z.3
Zhao, J.4
Jacq, A.5
Huang, X.6
-
21
-
-
3142550776
-
Hfq is essential for Vibrio cholerae virulence and downregulates sE expression
-
Ding, Y., Davis, B. M., and Waldor, M. K. (2004). Hfq is essential for Vibrio cholerae virulence and downregulates sE expression. Mol. Microbiol. 53, 345-354. doi: 10.1111/j.1365-2958.2004.04142.x
-
(2004)
Mol. Microbiol
, vol.53
, pp. 345-354
-
-
Ding, Y.1
Davis, B.M.2
Waldor, M.K.3
-
22
-
-
84930379179
-
Multiple ways to regulate translation initiation in bacteria: mechanisms, regulatory circuits, dynamics
-
Duval, M., Simonetti, A., Caldelari, I., and Marzi, S. (2014). Multiple ways to regulate translation initiation in bacteria: mechanisms, regulatory circuits, dynamics. Biochimie 114, 18-29. doi: 10.1016/j.biochi.2015.03.007
-
(2014)
Biochimie
, vol.114
, pp. 18-29
-
-
Duval, M.1
Simonetti, A.2
Caldelari, I.3
Marzi, S.4
-
23
-
-
84952690345
-
Hfq: a multifaceted RNA chaperone involved in virulence
-
Feliciano, J. R., Grilo, A. M., Guerreiro, S. I., Sousa, S. A., and Leitão, J. H. (2016). Hfq: a multifaceted RNA chaperone involved in virulence. Future Microbiol. 11, 137-151. doi: 10.2217/fmb.15.128
-
(2016)
Future Microbiol
, vol.11
, pp. 137-151
-
-
Feliciano, J.R.1
Grilo, A.M.2
Guerreiro, S.I.3
Sousa, S.A.4
Leitão, J.H.5
-
24
-
-
84920992591
-
A Qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics
-
Feng, L., Rutherford, S. T., Papenfort, K., Bagert, J. D., Van Kessel, J. C., Tirrell, D. A., et al. (2015). A Qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell 160, 228-240. doi: 10.1016/j.cell.2014.11.051
-
(2015)
Cell
, vol.160
, pp. 228-240
-
-
Feng, L.1
Rutherford, S.T.2
Papenfort, K.3
Bagert, J.D.4
Van Kessel, J.C.5
Tirrell, D.A.6
-
25
-
-
71549126189
-
Activation of gene expression by small RNA
-
Fröhlich, K. S., and Vogel, J. (2009). Activation of gene expression by small RNA. Curr. Opin. Microbiol. 12, 674-682. doi: 10.1016/j.mib.2009.09.009
-
(2009)
Curr. Opin. Microbiol
, vol.12
, pp. 674-682
-
-
Fröhlich, K.S.1
Vogel, J.2
-
26
-
-
84865275166
-
Identification of ligand analogues that control c-di-GMP riboswitches
-
Furukawa, K., Gu, H., Sudarsan, N., Hayakawa, Y., Hyodo, M., and Breaker, R. R. (2012). Identification of ligand analogues that control c-di-GMP riboswitches. ACS Chem. Biol. 7, 1436-1443. doi: 10.1021/cb300138n
-
(2012)
ACS Chem. Biol
, vol.7
, pp. 1436-1443
-
-
Furukawa, K.1
Gu, H.2
Sudarsan, N.3
Hayakawa, Y.4
Hyodo, M.5
Breaker, R.R.6
-
27
-
-
84873158623
-
Rise and fall of pandemic Vibrio parahaemolyticus serotype O3: K6 in southern Chile
-
García, K., Bastías, R., Higuera, G., Torres, R., Mellado, A., Uribe, P., et al. (2013). Rise and fall of pandemic Vibrio parahaemolyticus serotype O3: K6 in southern Chile. Environ. Microbiol. 15, 527-534. doi: 10.1111/j.1462-2920.2012.02883.x
-
(2013)
Environ. Microbiol
, vol.15
, pp. 527-534
-
-
García, K.1
Bastías, R.2
Higuera, G.3
Torres, R.4
Mellado, A.5
Uribe, P.6
-
28
-
-
72949086908
-
Dynamics of clinical and environmental Vibrio parahaemolyticus strains during seafood-related summer diarrhea outbreaks in southern Chile
-
García, K., Torres, R., Uribe, P., Hernández, C., Rioseco, M. L., Romero, J., et al. (2009). Dynamics of clinical and environmental Vibrio parahaemolyticus strains during seafood-related summer diarrhea outbreaks in southern Chile. Appl. Environ. Microbiol. 75, 7482-7487. doi: 10.1128/AEM.01662-09
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 7482-7487
-
-
García, K.1
Torres, R.2
Uribe, P.3
Hernández, C.4
Rioseco, M.L.5
Romero, J.6
-
29
-
-
79958047291
-
cis-antisense RNA, another level of gene regulation in bacteria
-
Georg, J., and Hess, W. R. (2011). cis-antisense RNA, another level of gene regulation in bacteria. Microbiol. Mol. Biol. Rev. 75, 286-300. doi: 10.1128/MMBR.00032-10
-
(2011)
Microbiol. Mol. Biol. Rev
, vol.75
, pp. 286-300
-
-
Georg, J.1
Hess, W.R.2
-
30
-
-
79961155218
-
Quorum sensing and silencing in Vibrio parahaemolyticus
-
Gode-Potratz, C. J., and McCarter, L. L. (2011). Quorum sensing and silencing in Vibrio parahaemolyticus. J. Bacteriol. 193, 4224-4237. doi: 10.1128/JB.00432-11
-
(2011)
J. Bacteriol
, vol.193
, pp. 4224-4237
-
-
Gode-Potratz, C.J.1
McCarter, L.L.2
-
31
-
-
34547437616
-
Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae
-
Hammer, B. K., and Bassler, B. L. (2007). Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae. Proc. Natl. Acad. Sci. U.S.A. 104, 11145-11149. doi: 10.1073/pnas.0703860104
-
(2007)
Proc. Natl. Acad. Sci. U.S.A
, vol.104
, pp. 11145-11149
-
-
Hammer, B.K.1
Bassler, B.L.2
-
32
-
-
84860774336
-
sRNAs and the virulence of Salmonella enterica serovar Typhimurium
-
Hébrard, M., Kröger, C., Srikumar, S., Colgan, A., Händler, K., and Hinton, J. C. D. (2012). sRNAs and the virulence of Salmonella enterica serovar Typhimurium. RNA Biol. 9, 437-445. doi: 10.4161/rna.20480
-
(2012)
RNA Biol
, vol.9
, pp. 437-445
-
-
Hébrard, M.1
Kröger, C.2
Srikumar, S.3
Colgan, A.4
Händler, K.5
Hinton, J.C.D.6
-
33
-
-
0036840879
-
Seasonality of chesapeake bay bacterioplankton species
-
Heidelberg, J. F., Heidelberg, K. B., and Colwell, R. R. (2002). Seasonality of chesapeake bay bacterioplankton species. Appl. Environ. Microbiol. 68, 5488-5497. doi: 10.1128/AEM.68.11.5488-5497.2002
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 5488-5497
-
-
Heidelberg, J.F.1
Heidelberg, K.B.2
Colwell, R.R.3
-
34
-
-
84904813263
-
TargetRNA2: identifying targets of small regulatory RNAs in bacteria
-
Kery, M. B., Feldman, M., Livny, J., and Tjaden, B. (2014). TargetRNA2: identifying targets of small regulatory RNAs in bacteria. Nucleic Acids Res. 42, 124-129. doi: 10.1093/nar/gku317
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 124-129
-
-
Kery, M.B.1
Feldman, M.2
Livny, J.3
Tjaden, B.4
-
35
-
-
84930511038
-
Systematic analysis of the role of bacterial Hfq-interacting sRNAs in the response to antibiotics
-
Kim, T., Bak, G., Lee, J., and Kim, K.-S. (2015). Systematic analysis of the role of bacterial Hfq-interacting sRNAs in the response to antibiotics. J. Antimicrob. Chemother. 70, 1659-1668. doi: 10.1093/jac/dkv042
-
(2015)
J. Antimicrob. Chemother
, vol.70
, pp. 1659-1668
-
-
Kim, T.1
Bak, G.2
Lee, J.3
Kim, K.-S.4
-
36
-
-
84958063875
-
Antisocial luxO mutants provide a stationary-phase survival advantage in Vibrio fischeri ES114
-
Kimbrough, J. H., and Stabb, E. V. (2016). Antisocial luxO mutants provide a stationary-phase survival advantage in Vibrio fischeri ES114. J. Bacteriol. 198, 673-687. doi: 10.1128/JB.00807-15
-
(2016)
J. Bacteriol
, vol.198
, pp. 673-687
-
-
Kimbrough, J.H.1
Stabb, E.V.2
-
37
-
-
46449132381
-
Impact of the RNA chaperone Hfq on the fitness and virulence potential of uropathogenic Escherichia coli
-
Kulesus, R. R., Diaz-Perez, K., Slechta, E. S., Eto, D. S., and Mulvey, M. A. (2008). Impact of the RNA chaperone Hfq on the fitness and virulence potential of uropathogenic Escherichia coli. Infect. Immun. 76, 3019-3026. doi: 10.1128/IAI.00022-08
-
(2008)
Infect. Immun
, vol.76
, pp. 3019-3026
-
-
Kulesus, R.R.1
Diaz-Perez, K.2
Slechta, E.S.3
Eto, D.S.4
Mulvey, M.A.5
-
38
-
-
33947241756
-
Identification and functional analysis of Vibrio vulnificus SmcR, a novel global regulator
-
Lee, J. H., Rhee, J. E., Park, U., Ju, H. M., Lee, B. C., Kim, T. S., et al. (2007). Identification and functional analysis of Vibrio vulnificus SmcR, a novel global regulator. J. Microbiol. Biotechnol. 17, 325-334.
-
(2007)
J. Microbiol. Biotechnol
, vol.17
, pp. 325-334
-
-
Lee, J.H.1
Rhee, J.E.2
Park, U.3
Ju, H.M.4
Lee, B.C.5
Kim, T.S.6
-
39
-
-
27944467332
-
CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae
-
Lenz, D. H., Miller, M. B., Zhu, J., Kulkarnl, R. V., and Bassler, B. L. (2005). CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae. Mol. Microbiol. 58, 1186-1202. doi: 10.1111/j.1365-2958.2005.04902.x
-
(2005)
Mol. Microbiol
, vol.58
, pp. 1186-1202
-
-
Lenz, D.H.1
Miller, M.B.2
Zhu, J.3
Kulkarnl, R.V.4
Bassler, B.L.5
-
40
-
-
3142564584
-
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae
-
Lenz, D. H., Mok, K. C., Lilley, B. N., Kulkarni, R. V., Wingreen, N. S., and Bassler, B. L. (2004). The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae. Cell 118, 69-82. doi: 10.1016/j.cell.2004.06.009
-
(2004)
Cell
, vol.118
, pp. 69-82
-
-
Lenz, D.H.1
Mok, K.C.2
Lilley, B.N.3
Kulkarni, R.V.4
Wingreen, N.S.5
Bassler, B.L.6
-
41
-
-
84920666144
-
Vibrio parahaemolyticus: a review on the pathogenesis, prevalence, and advance molecular identification techniques
-
Letchumanan, V., Chan, K. G., and Lee, L. H. (2014). Vibrio parahaemolyticus: a review on the pathogenesis, prevalence, and advance molecular identification techniques. Front. Microbiol. 5:705. doi: 10.3389/fmicb.2014.00705
-
(2014)
Front. Microbiol
, vol.5
, pp. 705
-
-
Letchumanan, V.1
Chan, K.G.2
Lee, L.H.3
-
42
-
-
84924328389
-
Comparative genomic analysis of clinical and environmental strains provides insight into the pathogenicity and evolution of Vibrio parahaemolyticus
-
Li, L., Wong, H., Nong, W., Cheung, M. K., Law, P. T. W., Kam, K. M., et al. (2014). Comparative genomic analysis of clinical and environmental strains provides insight into the pathogenicity and evolution of Vibrio parahaemolyticus. BMC Genomics 15:1135. doi: 10.1186/1471-2164-15-1135
-
(2014)
BMC Genomics
, vol.15
, pp. 1135
-
-
Li, L.1
Wong, H.2
Nong, W.3
Cheung, M.K.4
Law, P.T.W.5
Kam, K.M.6
-
43
-
-
0028181626
-
Analysis of the complexity of gene refulation by fur in Vibrio cholerae
-
Litwin, C. M., and Calderwood, S. B. (1994). Analysis of the complexity of gene refulation by fur in Vibrio cholerae. J. Bacteriol. 176, 240-248. doi: 10.1128/jb.176.1.240-248.1994
-
(1994)
J. Bacteriol
, vol.176
, pp. 240-248
-
-
Litwin, C.M.1
Calderwood, S.B.2
-
44
-
-
64549149245
-
Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing
-
Liu, J. M., Livny, J., Lawrence, M. S., Kimball, M. D., Waldor, M. K., and Camilli, A. (2009). Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing. Nucleic Acids Res. 37, 1-10. doi: 10.1093/nar/gkp080
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-10
-
-
Liu, J.M.1
Livny, J.2
Lawrence, M.S.3
Kimball, M.D.4
Waldor, M.K.5
Camilli, A.6
-
45
-
-
84928731961
-
Genome diversification within a clonal population of pandemic Vibrio parahaemolyticus seems to depend on the life circumstances of each individual bacteria
-
Loyola, D. E., Navarro, C., Uribe, P., García, K., Mella, C., Díaz, D., et al. (2015). Genome diversification within a clonal population of pandemic Vibrio parahaemolyticus seems to depend on the life circumstances of each individual bacteria. BMC Genomics 16:176. doi: 10.1186/s12864-015-1385-8
-
(2015)
BMC Genomics
, vol.16
, pp. 176
-
-
Loyola, D.E.1
Navarro, C.2
Uribe, P.3
García, K.4
Mella, C.5
Díaz, D.6
-
46
-
-
84892160844
-
Environmental reservoirs and mechanisms of persistence of Vibrio cholerae
-
Lutz, C., Erken, M., Noorian, P., Sun, S., and McDougald, D. (2013). Environmental reservoirs and mechanisms of persistence of Vibrio cholerae. Front. Microbiol. 4:375. doi: 10.3389/fmicb.2013.00375
-
(2013)
Front. Microbiol
, vol.4
, pp. 375
-
-
Lutz, C.1
Erken, M.2
Noorian, P.3
Sun, S.4
McDougald, D.5
-
47
-
-
79956157571
-
Evolution and classification of the CRISPR-Cas systems
-
Makarova, K. S., Haft, D. H., Barrangou, R., Brouns, S. J. J., Charpentier, E., Horvath, P., et al. (2011). Evolution and classification of the CRISPR-Cas systems. Nat. Rev. Microbiol. 9, 467-477. doi: 10.1038/nrmicro2577
-
(2011)
Nat. Rev. Microbiol
, vol.9
, pp. 467-477
-
-
Makarova, K.S.1
Haft, D.H.2
Barrangou, R.3
Brouns, S.J.J.4
Charpentier, E.5
Horvath, P.6
-
48
-
-
84922634643
-
Structure of bacterial regulatory RNAS determines their performance in competition for the chaperone protein HFQ
-
Malecka, E. M., Strózecka, J., Sobañska, D., and Olejniczak, M. (2015). Structure of bacterial regulatory RNAS determines their performance in competition for the chaperone protein HFQ. Biochemistry 54, 1157-1170. doi: 10.1021/bi500741d
-
(2015)
Biochemistry
, vol.54
, pp. 1157-1170
-
-
Malecka, E.M.1
Strózecka, J.2
Sobañska, D.3
Olejniczak, M.4
-
49
-
-
0141860088
-
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
-
Massé, E., Escorcia, F. E., and Gottesman, S. (2003). Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev. 17, 2374-2383. doi: 10.1101/gad.1127103
-
(2003)
Genes Dev
, vol.17
, pp. 2374-2383
-
-
Massé, E.1
Escorcia, F.E.2
Gottesman, S.3
-
50
-
-
0037007078
-
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
-
Massé, E., and Gottesman, S. (2002). A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 99, 4620-4625. doi: 10.1073/pnas.032066599
-
(2002)
Proc. Natl. Acad. Sci. U.S.A
, vol.99
, pp. 4620-4625
-
-
Massé, E.1
Gottesman, S.2
-
51
-
-
84940847323
-
Vibrio cholerae csra regulates ToxR levels in response to amino acids and is essential for virulence
-
Mey, A. R., Butz, H. A., and Payne, S. M. (2015). Vibrio cholerae csra regulates ToxR levels in response to amino acids and is essential for virulence. MBio 6, 1-11. doi: 10.1128/mBio.01064-15
-
(2015)
MBio
, vol.6
, pp. 1-11
-
-
Mey, A.R.1
Butz, H.A.2
Payne, S.M.3
-
52
-
-
23944509113
-
Characterization of Vibrio cholerae RyhB: the RyhB regulon and role of ryhB in biofilm formation
-
Mey, A. R., Craig, S. A., and Payne, S. M. (2005a). Characterization of Vibrio cholerae RyhB: the RyhB regulon and role of ryhB in biofilm formation. Infect. Immun. 73, 5706-5719. doi: 10.1128/IAI.73.9.5706-5719.2005
-
(2005)
Infect. Immun
, vol.73
, pp. 5706-5719
-
-
Mey, A.R.1
Craig, S.A.2
Payne, S.M.3
-
53
-
-
28444438519
-
Iron and Fur Regulation in Vibrio cholerae and the role of Fur in virulence
-
Mey, A. R., Wyckoff, E. E., Kanukurthy, V., Fisher, C. R., and Payne, S. M. (2005b). Iron and Fur Regulation in Vibrio cholerae and the role of Fur in virulence. Infect Immun 73, 8167-8178. doi: 10.1128/IAI.73.12.8167
-
(2005)
Infect Immun
, vol.73
, pp. 8167-8178
-
-
Mey, A.R.1
Wyckoff, E.E.2
Kanukurthy, V.3
Fisher, C.R.4
Payne, S.M.5
-
54
-
-
84901707142
-
Physiological roles of small RNA molecules
-
Michaux, C., Verneuil, N., Hartke, A., and Giard, J.-C. (2014). Physiological roles of small RNA molecules. Microbiology 160, 1007-1019. doi: 10.1099/mic.0.076208-0
-
(2014)
Microbiology
, vol.160
, pp. 1007-1019
-
-
Michaux, C.1
Verneuil, N.2
Hartke, A.3
Giard, J.-C.4
-
55
-
-
53249156098
-
Hfq regulates the expression of the thermostable direct hemolysin gene in Vibrio parahaemolyticus
-
Nakano, M., Takahashi, A., Su, Z., Harada, N., Mawatari, K., and Nakaya, Y. (2008). Hfq regulates the expression of the thermostable direct hemolysin gene in Vibrio parahaemolyticus. BMC Microbiol. 8:155. doi: 10.1186/1471-2180-8-155
-
(2008)
BMC Microbiol
, vol.8
, pp. 155
-
-
Nakano, M.1
Takahashi, A.2
Su, Z.3
Harada, N.4
Mawatari, K.5
Nakaya, Y.6
-
56
-
-
84903447003
-
Small RNAs in the Vibrionaceae: an ocean still to be explored
-
Nguyen, A., and Jacq, A. (2014). Small RNAs in the Vibrionaceae: an ocean still to be explored. Wiley Interdiscip. Rev. RNA 5, 381-392. doi: 10.1002/wrna.1218
-
(2014)
Wiley Interdiscip. Rev. RNA
, vol.5
, pp. 381-392
-
-
Nguyen, A.1
Jacq, A.2
-
57
-
-
84942782183
-
Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence
-
Oliva, G., Sahr, T., and Buchrieser, C. (2015). Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence. FEMS Microbiol. Rev. 39, 331-349. doi: 10.1093/femsre/fuv022
-
(2015)
FEMS Microbiol. Rev
, vol.39
, pp. 331-349
-
-
Oliva, G.1
Sahr, T.2
Buchrieser, C.3
-
58
-
-
84949967118
-
The Biology of Vibrio vulnificus
-
Oliver, J. D. (2015). The Biology of Vibrio vulnificus. Microbiol. Spectr. 3, 1-10. doi: 10.1128/microbiolspec.VE-0001-2014
-
(2015)
Microbiol. Spectr
, vol.3
, pp. 1-10
-
-
Oliver, J.D.1
-
59
-
-
84939288737
-
An assessment of bacterial small RNA target prediction programs
-
Pain, A., Ott, A., Amine, H., Rochat, T., Bouloc, P., and Gautheret, D. (2015). An assessment of bacterial small RNA target prediction programs. RNA Biol. 12, 509-513. doi: 10.1080/15476286.2015.1020269
-
(2015)
RNA Biol
, vol.12
, pp. 509-513
-
-
Pain, A.1
Ott, A.2
Amine, H.3
Rochat, T.4
Bouloc, P.5
Gautheret, D.6
-
60
-
-
84922440514
-
Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation
-
Papenfort, K., Förstner, K. U., Cong, J.-P., Sharma, C. M., and Bassler, B. L. (2015). Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation. Proc. Natl. Acad. Sci. U.S.A. 112, E766-E775. doi: 10.1073/pnas.1500203112
-
(2015)
Proc. Natl. Acad. Sci. U.S.A
, vol.112
, pp. E766-E775
-
-
Papenfort, K.1
Förstner, K.U.2
Cong, J.-P.3
Sharma, C.M.4
Bassler, B.L.5
-
61
-
-
84939502874
-
Target activation by regulatory RNAs in bacteria
-
Papenfort, K., and Vanderpool, C. K. (2015). Target activation by regulatory RNAs in bacteria. FEMS Microbiol. Rev. 39, 362-378. doi: 10.1093/femsre/fuv016
-
(2015)
FEMS Microbiol. Rev
, vol.39
, pp. 362-378
-
-
Papenfort, K.1
Vanderpool, C.K.2
-
62
-
-
77958028354
-
Regulatory RNA in bacterial pathogens
-
Papenfort, K., and Vogel, J. (2010). Regulatory RNA in bacterial pathogens. Cell Host Microbe 8, 116-127. doi: 10.1016/j.chom.2010.06.008
-
(2010)
Cell Host Microbe
, vol.8
, pp. 116-127
-
-
Papenfort, K.1
Vogel, J.2
-
63
-
-
84915760848
-
Small RNA functions in carbon metabolism and virulence of enteric pathogens
-
Papenfort, K., and Vogel, J. (2014). Small RNA functions in carbon metabolism and virulence of enteric pathogens. Front. Cell Infect Microbiol. 4:91. doi: 10.3389/fcimb.2014.00091
-
(2014)
Front. Cell Infect Microbiol
, vol.4
, pp. 91
-
-
Papenfort, K.1
Vogel, J.2
-
64
-
-
84939232427
-
DNA and RNA interference mechanisms by CRISPR-Cas surveillance complexes
-
Plagens, A., Richter, H., Charpentier, E., and Randau, L. (2015). DNA and RNA interference mechanisms by CRISPR-Cas surveillance complexes. FEMS Microbiol. Rev. 39, 442-463. doi: 10.1093/femsre/fuv019
-
(2015)
FEMS Microbiol. Rev
, vol.39
, pp. 442-463
-
-
Plagens, A.1
Richter, H.2
Charpentier, E.3
Randau, L.4
-
65
-
-
84942819091
-
Interplay between iron homeostasis and virulence: Fur and RyhB as major regulators of bacterial pathogenicity
-
Porcheron, G., and Dozois, C. M. (2015). Interplay between iron homeostasis and virulence: Fur and RyhB as major regulators of bacterial pathogenicity. Vet. Microbiol. 179, 2-14. doi: 10.1016/j.vetmic.2015.03.024
-
(2015)
Vet. Microbiol
, vol.179
, pp. 2-14
-
-
Porcheron, G.1
Dozois, C.M.2
-
66
-
-
84911406535
-
The small RNA RyhB contributes to siderophore production and virulence of uropathogenic Escherichia coli
-
Porcheron, G., Habib, R., Houle, S., Caza, M., Lépine, F., Daigle, F., et al. (2014). The small RNA RyhB contributes to siderophore production and virulence of uropathogenic Escherichia coli. Infect. Immun. 82, 5056-5068. doi: 10.1128/IAI.02287-14
-
(2014)
Infect. Immun
, vol.82
, pp. 5056-5068
-
-
Porcheron, G.1
Habib, R.2
Houle, S.3
Caza, M.4
Lépine, F.5
Daigle, F.6
-
67
-
-
84920677256
-
Roles of thermostable direct hemolysin (TDH) and TDH-related hemolysin (TRH) in Vibrio parahaemolyticus
-
Raghunath, P. (2015). Roles of thermostable direct hemolysin (TDH) and TDH-related hemolysin (TRH) in Vibrio parahaemolyticus. Front. Microbiol. 5:805. doi: 10.3389/fmicb.2014.00805
-
(2015)
Front. Microbiol
, vol.5
, pp. 805
-
-
Raghunath, P.1
-
68
-
-
84942079449
-
The CRISPR-Cas immune system: biology, mechanisms and applications
-
Rath, D., Amlinger, L., Rath, A., and Lundgren, M. (2015). The CRISPR-Cas immune system: biology, mechanisms and applications. Biochimie 117, 119-128. doi: 10.1016/j.biochi.2015.03.025
-
(2015)
Biochimie
, vol.117
, pp. 119-128
-
-
Rath, D.1
Amlinger, L.2
Rath, A.3
Lundgren, M.4
-
69
-
-
58149375464
-
Small regulatory non-coding RNAs in bacteria: physiology and mechanistic aspects
-
Repoila, F., and Darfeuille, F. (2009). Small regulatory non-coding RNAs in bacteria: physiology and mechanistic aspects. Biol. Cell 101, 117-131. doi: 10.1042/BC20070137
-
(2009)
Biol. Cell
, vol.101
, pp. 117-131
-
-
Repoila, F.1
Darfeuille, F.2
-
70
-
-
78649586895
-
The Vibrio cholerae virulence regulatory cascade controls glucose uptake through activation of TarA, a small regulatory RNA
-
Richard, A. L., Withey, J. H., Beyhan, S., Yildiz, F., and Dirita, V. J. (2010). The Vibrio cholerae virulence regulatory cascade controls glucose uptake through activation of TarA, a small regulatory RNA. Mol. Microbiol. 78, 1171-1181. doi: 10.1111/j.1365-2958.2010.07397.x
-
(2010)
Mol. Microbiol
, vol.78
, pp. 1171-1181
-
-
Richard, A.L.1
Withey, J.H.2
Beyhan, S.3
Yildiz, F.4
Dirita, V.J.5
-
71
-
-
84873165273
-
Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems
-
Romeo, T., Vakulskas, C. A., and Babitzke, P. (2013). Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems. Environ. Microbiol. 15, 313-324. doi: 10.1111/j.1462-2920.2012.02794.x
-
(2013)
Environ. Microbiol
, vol.15
, pp. 313-324
-
-
Romeo, T.1
Vakulskas, C.A.2
Babitzke, P.3
-
72
-
-
84875597802
-
Bacterial quorum sensing: its role in virulence and possibilities for its control
-
Rutherford, S. T., and Bassler, B. L. (2012). Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harb. Perspect. Med. 2, 1-26. doi: 10.1101/cshperspect.a012427
-
(2012)
Cold Spring Harb. Perspect. Med
, vol.2
, pp. 1-26
-
-
Rutherford, S.T.1
Bassler, B.L.2
-
73
-
-
79951686628
-
AphA and LuxR /HapR reciprocally control quorum sensing in vibrios
-
Rutherford, S. T., Van Kessel, J. C., Shao, Y., and Bassler, B. L. (2011). AphA and LuxR /HapR reciprocally control quorum sensing in vibrios. Genes Dev. 25, 397-408. doi: 10.1101/gad.2015011
-
(2011)
Genes Dev
, vol.25
, pp. 397-408
-
-
Rutherford, S.T.1
Van Kessel, J.C.2
Shao, Y.3
Bassler, B.L.4
-
74
-
-
84928267228
-
The VrrA sRNA controls a stationary phase survival factor Vrp of Vibrio cholerae
-
Sabharwal, D., Song, T., Papenfort, K., and Wai, S. N. (2015). The VrrA sRNA controls a stationary phase survival factor Vrp of Vibrio cholerae. RNA Biol. 12, 186-196. doi: 10.1080/15476286.2015.1017211
-
(2015)
RNA Biol
, vol.12
, pp. 186-196
-
-
Sabharwal, D.1
Song, T.2
Papenfort, K.3
Wai, S.N.4
-
75
-
-
85006339828
-
Adherence to intestinal cells promotes biofilm formation in Vibrio cholerae Accepted
-
Sengupta, C., Mukherjee, O., and Chowdhury, R. (2016). Adherence to intestinal cells promotes biofilm formation in Vibrio cholerae Accepted. J. Infect. Dis. 240, 1571-1578. doi: 10.1074/jbc.M115.640094
-
(2016)
J. Infect. Dis
, vol.240
, pp. 1571-1578
-
-
Sengupta, C.1
Mukherjee, O.2
Chowdhury, R.3
-
76
-
-
84856054890
-
Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets
-
Shao, Y., and Bassler, B. L. (2012). Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets. Mol. Microbiol. 83, 599-611. doi: 10.1111/j.1365-2958.2011.07959.x
-
(2012)
Mol. Microbiol
, vol.83
, pp. 599-611
-
-
Shao, Y.1
Bassler, B.L.2
-
77
-
-
84901638934
-
Quorum regulatory small RNAs repress type VI secretion in vibrio cholerae
-
Shao, Y., and Bassler, B. L. (2014). Quorum regulatory small RNAs repress type VI secretion in vibrio cholerae. Mol. Microbiol. 92, 921-930. doi: 10.1111/mmi.12599
-
(2014)
Mol. Microbiol
, vol.92
, pp. 921-930
-
-
Shao, Y.1
Bassler, B.L.2
-
78
-
-
84881478217
-
Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulation
-
Shao, Y., Feng, L., Rutherford, S. T., Papenfort, K., and Bassler, B. L. (2013). Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulation. EMBO J. 32, 2158-2171. doi: 10.1038/emboj.2013.155
-
(2013)
EMBO J
, vol.32
, pp. 2158-2171
-
-
Shao, Y.1
Feng, L.2
Rutherford, S.T.3
Papenfort, K.4
Bassler, B.L.5
-
79
-
-
77955370225
-
Identification of non-coding RNAs in environmental vibrios
-
Silveira, A. C. G., Robertson, K. L., Lin, B., Wang, Z., Vora, G. J., Vasconcelos, A. T. R., et al. (2010). Identification of non-coding RNAs in environmental vibrios. Microbiology 156, 2452-2458. doi: 10.1099/mic.0.039149-0
-
(2010)
Microbiology
, vol.156
, pp. 2452-2458
-
-
Silveira, A.C.G.1
Robertson, K.L.2
Lin, B.3
Wang, Z.4
Vora, G.J.5
Vasconcelos, A.T.R.6
-
80
-
-
79953178284
-
Interactions of the c-di-GMP riboswitch with its second messenger ligand
-
Smith, K. D., and Strobel, S. A. (2011). Interactions of the c-di-GMP riboswitch with its second messenger ligand. Biochem. Soc. Trans. 39, 647-651. doi: 10.1042/BST0390647
-
(2011)
Biochem. Soc. Trans
, vol.39
, pp. 647-651
-
-
Smith, K.D.1
Strobel, S.A.2
-
81
-
-
84904620960
-
Vibrio cholerae utilizes direct sRNA regulation in expression of a biofilm matrix protein
-
Song, T., Sabharwal, D., Gurung, J. M., Cheng, A. T., Sjöström, A. E., Yildiz, F. H., et al. (2014). Vibrio cholerae utilizes direct sRNA regulation in expression of a biofilm matrix protein. PLoS ONE 9:e101280. doi: 10.1371/journal.pone.0101280
-
(2014)
PLoS ONE
, vol.9
-
-
Song, T.1
Sabharwal, D.2
Gurung, J.M.3
Cheng, A.T.4
Sjöström, A.E.5
Yildiz, F.H.6
-
82
-
-
77954386234
-
VrrA mediates Hfq-dependent regulation of OmpT synthesis in vibrio cholerae
-
Song, T., Sabharwal, D., and Wai, S. N. (2010). VrrA mediates Hfq-dependent regulation of OmpT synthesis in vibrio cholerae. J. Mol. Biol. 400, 682-688. doi: 10.1016/j.jmb.2010.05.061
-
(2010)
J. Mol. Biol
, vol.400
, pp. 682-688
-
-
Song, T.1
Sabharwal, D.2
Wai, S.N.3
-
83
-
-
79959334774
-
A novel sRNA that modulates virulence and environmental fitness of Vibrio cholerae
-
Song, T., and Wai, S. N. (2009). A novel sRNA that modulates virulence and environmental fitness of Vibrio cholerae. RNA Biol. 6, 254-258. doi: 10.4161/rna.6.3.8371
-
(2009)
RNA Biol
, vol.6
, pp. 254-258
-
-
Song, T.1
Wai, S.N.2
-
84
-
-
0141681868
-
Reduced virulence of a hfq mutant of Pseudomonas aeruginosa O1
-
Sonnleitner, E., Hagens, S., Rosenau, F., Wilhelm, S., Habel, A., Jäger, K. E., et al. (2003). Reduced virulence of a hfq mutant of Pseudomonas aeruginosa O1. Microb. Pathog. 35, 217-228. doi: 10.1016/S0882-4010(03)00149-9
-
(2003)
Microb. Pathog
, vol.35
, pp. 217-228
-
-
Sonnleitner, E.1
Hagens, S.2
Rosenau, F.3
Wilhelm, S.4
Habel, A.5
Jäger, K.E.6
-
85
-
-
72849114230
-
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
-
Sorek, R., and Cossart, P. (2010). Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity. Nat. Rev. Genet. 11, 9-16. doi: 10.1038/nrg2695
-
(2010)
Nat. Rev. Genet
, vol.11
, pp. 9-16
-
-
Sorek, R.1
Cossart, P.2
-
86
-
-
84866331197
-
A tangled web: regulatory connections between quorum sensing and cyclic Di-GMP
-
Srivastava, D., and Waters, C. M. (2012). A tangled web: regulatory connections between quorum sensing and cyclic Di-GMP. J. Bacteriol. 194, 4485-4493. doi: 10.1128/JB.00379-12
-
(2012)
J. Bacteriol
, vol.194
, pp. 4485-4493
-
-
Srivastava, D.1
Waters, C.M.2
-
87
-
-
84921277835
-
Association of CRISPR/Cas evolution with Vibrio parahaemolyticus virulence factors and genotypes
-
Sun, H., Li, Y., Shi, X., Lin, Y., Qiu, Y., Zhang, J., et al. (2015). Association of CRISPR/Cas evolution with Vibrio parahaemolyticus virulence factors and genotypes. Foodborne Pathog. Dis. 12, 68-73. doi: 10.1089/fpd.2014.1792
-
(2015)
Foodborne Pathog. Dis
, vol.12
, pp. 68-73
-
-
Sun, H.1
Li, Y.2
Shi, X.3
Lin, Y.4
Qiu, Y.5
Zhang, J.6
-
88
-
-
84881554800
-
Competence and natural transformation in vibrios
-
Sun, Y., Bernardy, E. E., Hammer, B. K., and Miyashiro, T. (2013). Competence and natural transformation in vibrios. Mol. Microbiol. 89, 583-595. doi: 10.1111/mmi.12307
-
(2013)
Mol. Microbiol
, vol.89
, pp. 583-595
-
-
Sun, Y.1
Bernardy, E.E.2
Hammer, B.K.3
Miyashiro, T.4
-
89
-
-
38349081513
-
cholerae's transition out of quorum-sensing mode A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode
-
Svenningsen, S. L., Waters, C. M., and Bassler, B. L. (2008). cholerae's transition out of quorum-sensing mode A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode. Genes Dev. 22, 226-238. doi: 10.1101/gad.1629908
-
(2008)
Genes Dev
, vol.22
, pp. 226-238
-
-
Svenningsen, S.L.1
Waters, C.M.2
Bassler, B.L.3
-
90
-
-
84880999526
-
The vibrio parahaemolyticus small rna ryhb promotes production of the siderophore vibrioferrin by stabilizing the polycistronic mRNA
-
Tanabe, T., Funahashi, T., Nakao, H., Maki, J., and Yamamoto, S. (2013). The vibrio parahaemolyticus small rna ryhb promotes production of the siderophore vibrioferrin by stabilizing the polycistronic mRNA. J. Bacteriol. 195, 3692-3703. doi: 10.1128/JB.00162-13
-
(2013)
J. Bacteriol
, vol.195
, pp. 3692-3703
-
-
Tanabe, T.1
Funahashi, T.2
Nakao, H.3
Maki, J.4
Yamamoto, S.5
-
91
-
-
84959491754
-
The small RNA Spot 42 regulates the expression of the type III secretion system 1 (T3SS1) chaperone protein VP1682 in Vibrio parahaemolyticus
-
Tanabe, T., Miyamoto, K., Tsujibo, H., Yamamoto, S., and Funahashi, T. (2015). The small RNA Spot 42 regulates the expression of the type III secretion system 1 (T3SS1) chaperone protein VP1682 in Vibrio parahaemolyticus. FEMS Microbiol. Lett. 362, 1-8. doi: 10.1093/femsle/fnv173
-
(2015)
FEMS Microbiol. Lett
, vol.362
, pp. 1-8
-
-
Tanabe, T.1
Miyamoto, K.2
Tsujibo, H.3
Yamamoto, S.4
Funahashi, T.5
-
92
-
-
84928388192
-
Living in the matrix: assembly and control of Vibrio cholerae biofilms
-
Teschler, J. K., Zamorano-Sánchez, D., Utada, A. S., Warner, C. J. A., Wong, G. C. L., Linington, R. G., et al. (2015). Living in the matrix: assembly and control of Vibrio cholerae biofilms. Nat. Rev. Microbiol. 13, 255-268. doi: 10.1038/nrmicro3433
-
(2015)
Nat. Rev. Microbiol
, vol.13
, pp. 255-268
-
-
Teschler, J.K.1
Zamorano-Sánchez, D.2
Utada, A.S.3
Warner, C.J.A.4
Wong, G.C.L.5
Linington, R.G.6
-
93
-
-
4544321687
-
Biodiversity of Vibrios
-
Thompson, F. L., Iida, T., and Swings, J. (2004). Biodiversity of Vibrios. Microbiol. Mol. Biol. Rev 68, 403-431. doi: 10.1128/MMBR.68.3.403-431.2004
-
(2004)
Microbiol. Mol. Biol. Rev
, vol.68
, pp. 403-431
-
-
Thompson, F.L.1
Iida, T.2
Swings, J.3
-
94
-
-
48449101958
-
TargetRNA: a tool for predicting targets of small RNA action in bacteria
-
Tjaden, B. (2008). TargetRNA: a tool for predicting targets of small RNA action in bacteria. Nucleic Acids Res. 36, 109-113. doi: 10.1093/nar/gkn264
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 109-113
-
-
Tjaden, B.1
-
95
-
-
79958094065
-
The VarS/VarA two-component system modulates the activity of the Vibrio cholerae quorum-sensing transcriptional regulator HapR
-
Tsou, A. M., Liu, Z., Cai, T., and Zhu, J. (2011). The VarS/VarA two-component system modulates the activity of the Vibrio cholerae quorum-sensing transcriptional regulator HapR. Microbiology 157, 1620-1628. doi: 10.1099/mic.0.046235-0
-
(2011)
Microbiology
, vol.157
, pp. 1620-1628
-
-
Tsou, A.M.1
Liu, Z.2
Cai, T.3
Zhu, J.4
-
96
-
-
33846508567
-
Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi
-
Tu, K. C., and Bassler, B. L. (2007). Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi. Genes Dev. 21, 221-233. doi: 10.1101/gad.1502407
-
(2007)
Genes Dev
, vol.21
, pp. 221-233
-
-
Tu, K.C.1
Bassler, B.L.2
-
97
-
-
84940029777
-
How do base-pairing small RNAs evolve?
-
Updegrove, T. B., Shabalina, S. A., and Storz, G. (2015). How do base-pairing small RNAs evolve? FEMS Microbiol. Rev. 39, 379-391. doi: 10.1093/femsre/fuv014
-
(2015)
FEMS Microbiol. Rev
, vol.39
, pp. 379-391
-
-
Updegrove, T.B.1
Shabalina, S.A.2
Storz, G.3
-
98
-
-
84933511144
-
Regulation of bacterial virulence by Csr (Rsm) systems
-
Vakulskas, C. A., Potts, A. H., Babitzke, P., Ahmer, B. M. M., and Romeo, T. (2015). Regulation of bacterial virulence by Csr (Rsm) systems. Microbiol. Mol. Biol. Rev. 79, 193-224. doi: 10.1128/MMBR.00052-14
-
(2015)
Microbiol. Mol. Biol. Rev
, vol.79
, pp. 193-224
-
-
Vakulskas, C.A.1
Potts, A.H.2
Babitzke, P.3
Ahmer, B.M.M.4
Romeo, T.5
-
99
-
-
84928324017
-
Quorum sensing regulates the osmotic stress response in Vibrio harveyi
-
Van Kessel, J. C., Rutherford, S. T., Cong, J.-P., Quinodoz, S., Healy, J., and Bassler, B. L. (2015). Quorum sensing regulates the osmotic stress response in Vibrio harveyi. J. Bacteriol. 197, 73-80. doi: 10.1128/JB.02246-14
-
(2015)
J. Bacteriol
, vol.197
, pp. 73-80
-
-
Van Kessel, J.C.1
Rutherford, S.T.2
Cong, J.-P.3
Quinodoz, S.4
Healy, J.5
Bassler, B.L.6
-
100
-
-
84873046241
-
Individual and combined roles of the master regulators apha and luxr in control of the Vibrio harveyi quorum-sensing regulon
-
Van Kessel, J. C., Rutherford, S. T., Shao, Y., Utria, A. F., and Bassler, B. L. (2013a). Individual and combined roles of the master regulators apha and luxr in control of the Vibrio harveyi quorum-sensing regulon. J. Bacteriol. 195, 436-443. doi: 10.1128/JB.01998-12
-
(2013)
J. Bacteriol
, vol.195
, pp. 436-443
-
-
Van Kessel, J.C.1
Rutherford, S.T.2
Shao, Y.3
Utria, A.F.4
Bassler, B.L.5
-
101
-
-
84883370908
-
Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi
-
Van Kessel, J. C., Ulrich, L. E., Zhulin, I. B., and Bassler, L. (2013b). Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi. mBio 4, e378-e313. doi: 10.1128/mBio.00378-13.Editor
-
(2013)
mBio
, vol.4
, pp. e378-e313
-
-
Van Kessel, J.C.1
Ulrich, L.E.2
Zhulin, I.B.3
Bassler, L.4
-
102
-
-
84945492951
-
Experimental approaches to identify small RNAs and their diverse roles in bacteria-what we have learnt in one decade of MicA research
-
Van Puyvelde, S., Vanderleyden, J., and De Keersmaecker, S. C. J. (2015). Experimental approaches to identify small RNAs and their diverse roles in bacteria-what we have learnt in one decade of MicA research. Microbiologyopen 4, 699-711. doi: 10.1002/mbo3.263
-
(2015)
Microbiologyopen
, vol.4
, pp. 699-711
-
-
Van Puyvelde, S.1
Vanderleyden, J.2
De Keersmaecker, S.C.J.3
-
103
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel, J., and Luisi, B. F. (2011). Hfq and its constellation of RNA. Nat. Rev. Microbiol. 9, 578-589. doi: 10.1038/nrmicro2615
-
(2011)
Nat. Rev. Microbiol
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
104
-
-
84879014020
-
Cycling of RNAs on Hfq
-
Wagner, E. G. H. (2013). Cycling of RNAs on Hfq. RNA Biol. 10, 619-626. doi: 10.4161/rna.24044
-
(2013)
RNA Biol
, vol.10
, pp. 619-626
-
-
Wagner, E.G.H.1
-
105
-
-
84893752687
-
The LuxR-type regulator VpsT negatively controls the transcription of rpos, encoding the general stress response regulator, in Vibrio cholerae biofilms
-
Wang, H., Ayala, J. C., Benitez, J. A., and Silva, A. J. (2014). The LuxR-type regulator VpsT negatively controls the transcription of rpos, encoding the general stress response regulator, in Vibrio cholerae biofilms. J. Bacteriol. 196, 1020-1030. doi: 10.1128/JB.00993-13
-
(2014)
J. Bacteriol
, vol.196
, pp. 1020-1030
-
-
Wang, H.1
Ayala, J.C.2
Benitez, J.A.3
Silva, A.J.4
-
106
-
-
60149089144
-
Regulatory RNAs in Bacteria
-
Waters, L. S., and Storz, G. (2009). Regulatory RNAs in Bacteria. Cell 136, 615-628. doi: 10.1016/j.cell.2009.01.043
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
107
-
-
84976870645
-
Iron-and quorum-sensing signals converge on small quorum-regulatory RNAs for coordinated regulation of virulence factors in Vibrio vulnificus
-
Wen, Y., Kim, I. H., and Kim, K. S. (2016). Iron-and quorum-sensing signals converge on small quorum-regulatory RNAs for coordinated regulation of virulence factors in Vibrio vulnificus. J. Biol. Chem. 291, 14213-14230. doi: 10.1074/jbc.M116.714063
-
(2016)
J. Biol. Chem
, vol.291
, pp. 14213-14230
-
-
Wen, Y.1
Kim, I.H.2
Kim, K.S.3
-
108
-
-
84899105533
-
CRISPR-Cas systems: beyond adaptive immunity
-
Westra, E. R., Buckling, A., and Fineran, P. C. (2014). CRISPR-Cas systems: beyond adaptive immunity. Nat. Rev. Microbiol. 12, 317-326. doi: 10.1038/nrmicro3241
-
(2014)
Nat. Rev. Microbiol
, vol.12
, pp. 317-326
-
-
Westra, E.R.1
Buckling, A.2
Fineran, P.C.3
-
109
-
-
84904810632
-
CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains
-
Wright, P. R., Georg, J., Mann, M., Sorescu, D. A., Richter, A. S., Lott, S., et al. (2014). CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains. Nucleic Acids Res. 42, 119-123. doi: 10.1093/nar/gku359
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 119-123
-
-
Wright, P.R.1
Georg, J.2
Mann, M.3
Sorescu, D.A.4
Richter, A.S.5
Lott, S.6
-
110
-
-
84859581044
-
Transcriptional regulation of opaR, qrr2-4 and aphA by the master quorum-sensing regulator opaR in Vibrio parahaemolyticus
-
Zhang, Y., Qiu, Y., Tan, Y., Guo, Z., Yang, R., and Zhou, D. (2012). Transcriptional regulation of opaR, qrr2-4 and aphA by the master quorum-sensing regulator opaR in Vibrio parahaemolyticus. PLoS ONE 7:e34622. doi: 10.1371/journal.pone.0034622
-
(2012)
PLoS ONE
, vol.7
-
-
Zhang, Y.1
Qiu, Y.2
Tan, Y.3
Guo, Z.4
Yang, R.5
Zhou, D.6
|