-
1
-
-
63449107173
-
A general modular framework for gene set enrichment analysis
-
Ackermann, M. and Strimmer, K. (2009). A general modular framework for gene set enrichment analysis. BMC Bioinformatics 10, 47. https://doi.org/10.1186/1471-2105-10-47.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 47
-
-
Ackermann, M.1
Strimmer, K.2
-
2
-
-
79551716414
-
ATLA (Alternatives to Laboratory Animals): Past, present and future
-
Balls, M. (2010). ATLA (Alternatives to Laboratory Animals): Past, present and future. Altern Lab Anim 38, 437-441.
-
(2010)
Altern Lab Anim
, vol.38
, pp. 437-441
-
-
Balls, M.1
-
3
-
-
0043011674
-
Involvement of reactive oxygen species in the metabolic pathways triggered by diesel exhaust particles in human airway epithelial cells
-
Baulig, A., Garlatti, M., Bonvallot, V. et al. (2003). Involvement of reactive oxygen species in the metabolic pathways triggered by diesel exhaust particles in human airway epithelial cells. Am J Physiol Lung Cell Mol Physiol 285, L671-L679. https://doi.org/10.1152/ajplung.00419.2002.
-
(2003)
Am J Physiol Lung Cell Mol Physiol
, vol.285
, pp. L671-L679
-
-
Baulig, A.1
Garlatti, M.2
Bonvallot, V.3
-
4
-
-
85011969022
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y. and Hochberg, Y. (1995). Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc Series B Stat Methodol 57, 289-300. http://www.jstor.org/stable/2346101.
-
(1995)
J R Stat Soc Series B Stat Methodol
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
5
-
-
79955484701
-
Toxicology in the 21st century - working our way towards a visionary reality
-
Berg, N., De Wever, B., Fuchs, H. W. et al. (2011). Toxicology in the 21st century - working our way towards a visionary reality. Toxicol In Vitro 25, 874-881. https://doi.org/10.1016/j.tiv.2011.02.008.
-
(2011)
Toxicol in Vitro
, vol.25
, pp. 874-881
-
-
Berg, N.1
De Wever, B.2
Fuchs, H.W.3
-
6
-
-
64849086385
-
In vitro models of inhalation toxicity and disease
-
BéruBé, K., Aufderheide, M., Breheny, D. et al. (2009). In vitro models of inhalation toxicity and disease. Altern Lab Anim 37, 89-141.
-
(2009)
Altern Lab Anim
, vol.37
, pp. 89-141
-
-
BéruBé, K.1
Aufderheide, M.2
Breheny, D.3
-
7
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
Bolstad, B. M., Irizarry, R. A., Astrand, M. et al. (2003). A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19, 185-193.
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
-
8
-
-
33645274977
-
Quality assessment of affymetrix genechip data
-
R. Gentleman, V. Carey, W. Huber et al. (eds.), Heidelberg, Germany: Springer
-
Bolstad, B., Collin, F., Brettschneider, J. et al. (2005). Quality Assessment of Affymetrix GeneChip Data. In R. Gentleman, V. Carey, W. Huber et al. (eds.), Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Heidelberg, Germany: Springer.
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
-
-
Bolstad, B.1
Collin, F.2
Brettschneider, J.3
-
9
-
-
84941344454
-
Causal biological network database: A comprehensive platform of causal biological network models focused on the pulmonary and vascular systems
-
Boué, S., Talikka, M., Westra, J. W. et al. (2015). Causal biological network database: A comprehensive platform of causal biological network models focused on the pulmonary and vascular systems. Database 2015. https://doi.org/10.1093/database/bav030.
-
(2015)
Database
, vol.2015
-
-
Boué, S.1
Talikka, M.2
Westra, J.W.3
-
10
-
-
84914151234
-
FOXJ1 prevents cilia growth inhibition by cigarette smoke in human airway epithelium in vitro
-
Brekman, A., Walters, M. S., Tilley, A. E. et al. (2014). FOXJ1 prevents cilia growth inhibition by cigarette smoke in human airway epithelium in vitro. Am J Respir Cell Mol Biol 51, 688-700. https://doi.org/10.1165/rcmb.2013-0363OC.
-
(2014)
Am J Respir Cell Mol Biol
, vol.51
, pp. 688-700
-
-
Brekman, A.1
Walters, M.S.2
Tilley, A.E.3
-
11
-
-
18344403836
-
Cell proliferation in nasal respiratory epithelium of people exposed to urban pollution
-
Calderón-Garcidueñas, L., Rodriguez-Alcaraz, A., Garcia, R. et al. (1999). Cell proliferation in nasal respiratory epithelium of people exposed to urban pollution. Carcinogenesis 20, 383- 389. https://doi.org/10.1093/carcin/20.3.383.
-
(1999)
Carcinogenesis
, vol.20
, pp. 383-389
-
-
Calderón-Garcidueñas, L.1
Rodriguez-Alcaraz, A.2
Garcia, R.3
-
12
-
-
77957230671
-
A framework for oligonucleotide microarray preprocessing
-
Carvalho, B. S. and Irizarry, R. A. (2010). A framework for oligonucleotide microarray preprocessing. Bioinformatics 26, 2363-2367. https://doi.org/10.1093/bioinformatics/btq431.
-
(2010)
Bioinformatics
, vol.26
, pp. 2363-2367
-
-
Carvalho, B.S.1
Irizarry, R.A.2
-
13
-
-
84876100615
-
Enrichr: Interactive and collaborative HTML5 gene list enrichment analysis tool
-
Chen, E. Y., Tan, C. M., Kou, Y. et al. (2013). Enrichr: Interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics 14, 128. https://doi.org/10.1186/1471-2105-14-128.
-
(2013)
BMC Bioinformatics
, vol.14
, pp. 128
-
-
Chen, E.Y.1
Tan, C.M.2
Kou, Y.3
-
14
-
-
43449116657
-
Tissue inhibitor of metalloproteinase-1 moderates airway re-epithelialization by regulating matrilysin activity
-
Chen, P., McGuire, J. K., Hackman, R. C. et al. (2008). Tissue inhibitor of metalloproteinase-1 moderates airway re-epithelialization by regulating matrilysin activity. Am J Pathol 172, 1256-1270. https://doi.org/10.2353/ajpath.2008.070891.
-
(2008)
Am J Pathol
, vol.172
, pp. 1256-1270
-
-
Chen, P.1
McGuire, J.K.2
Hackman, R.C.3
-
15
-
-
34447318645
-
Epithelial cell proliferation contributes to airway remodeling in severe asthma
-
Cohen, L., E, X., Tarsi, J. et al. (2007). Epithelial cell proliferation contributes to airway remodeling in severe asthma. Am J Respir Crit Care Med 176, 138-145. https://doi.org/10.1164/rccm.200607-1062OC.
-
(2007)
Am J Respir Crit Care Med
, vol.176
, pp. 138-145
-
-
Cohen, L.E.X.1
Tarsi, J.2
-
16
-
-
73449140810
-
Cigarette smoke condensate inhibits transepithelial chloride transport and ciliary beat frequency
-
Cohen, N. A., Zhang, S., Sharp, D. B. et al. (2009). Cigarette smoke condensate inhibits transepithelial chloride transport and ciliary beat frequency. Laryngoscope 119, 2269-2274. https://doi.org/10.1002/lary.20223.
-
(2009)
Laryngoscope
, vol.119
, pp. 2269-2274
-
-
Cohen, N.A.1
Zhang, S.2
Sharp, D.B.3
-
17
-
-
84979951014
-
The use of in vitro 3D cell models of human airway epithelia (MucilAir™) in inhalation toxicology
-
J. Haycock, A. Whluwalia and M. Wilkinson (eds.), . London, UK: CRC Press
-
Constant, S., Wiszniewski, L. and Huang, S. (2014). The use of in vitro 3D cell models of human airway epithelia (MucilAir™) in inhalation toxicology. In J. Haycock, A. Whluwalia and M. Wilkinson (eds.), Cellular In Vitro Testing: Methods and Protocols (15-33). London, UK: CRC Press.
-
(2014)
Cellular in Vitro Testing: Methods and Protocols
, pp. 15-33
-
-
Constant, S.1
Wiszniewski, L.2
Huang, S.3
-
18
-
-
84884589882
-
Occupational risk factors for sinonasal inverted papilloma: A case-control study
-
D'Errico, A., Zajacova, J., Cacciatore, A. et al. (2013). Occupational risk factors for sinonasal inverted papilloma: A case-control study. Occup Environ Med 70, 703-708. https://doi.org/10.1136/oemed-2013-101384.
-
(2013)
Occup Environ Med
, vol.70
, pp. 703-708
-
-
D'Errico, A.1
Zajacova, J.2
Cacciatore, A.3
-
19
-
-
29144535372
-
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
-
Dai, M., Wang, P., Boyd, A. D. et al. (2005). Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data. Nucleic Acids Res 33, e175. https://doi.org/10.1093/nar/gni179.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. e175
-
-
Dai, M.1
Wang, P.2
Boyd, A.D.3
-
20
-
-
84883985953
-
Chapter 10 - biomarkers: Discovery, qualification and application
-
W. M. Haschek, C. G. Rousseaux and M. A. Wallig (eds.), 3rd edition. Boston: Academic Press
-
Davis, M. A., Eldridge, S. and Louden, C. (2013). Chapter 10 - biomarkers: Discovery, qualification and application. In W. M. Haschek, C. G. Rousseaux and M. A. Wallig (eds.), Haschek and Rousseaux's Handbook of Toxicologic Pathology. 3rd edition. Boston: Academic Press. https://doi.org/10.1016/B978-0-12-415759-0.00010-8.
-
(2013)
Haschek and Rousseaux's Handbook of Toxicologic Pathology
-
-
Davis, M.A.1
Eldridge, S.2
Louden, C.3
-
21
-
-
9944256233
-
The use of human nasal in vitro cell systems during drug discovery and development
-
Dimova, S., Brewster, M., Noppe, M. et al. (2005). The use of human nasal in vitro cell systems during drug discovery and development. Toxicol In Vitro 19, 107-122. https://doi.org/10.1016/j.tiv.2004.07.003.
-
(2005)
Toxicol in Vitro
, vol.19
, pp. 107-122
-
-
Dimova, S.1
Brewster, M.2
Noppe, M.3
-
22
-
-
34347216756
-
The expression of MUC5AC and MUC5B mucin genes in the mucosa of chronic rhinosinusitis and nasal polyposis
-
Ding, G. Q. and Zheng, C. Q. (2007). The expression of MUC5AC and MUC5B mucin genes in the mucosa of chronic rhinosinusitis and nasal polyposis. Am J Rhinol 21, 359-366. https://doi.org/10.2500/ajr.2007.21.3037.
-
(2007)
Am J Rhinol
, vol.21
, pp. 359-366
-
-
Ding, G.Q.1
Zheng, C.Q.2
-
23
-
-
84930543108
-
Alternatives to animal testing: A review
-
Doke, S. K. and Dhawale, S. C. (2015). Alternatives to animal testing: A review. Saudi Pharm J 23, 223-229. https://doi.org/10.1016/j.jsps.2013.11.002.
-
(2015)
Saudi Pharm J
, vol.23
, pp. 223-229
-
-
Doke, S.K.1
Dhawale, S.C.2
-
24
-
-
1342288026
-
Affy -Analysis of Affymetrix GeneChip data at the probe level
-
Gautier, L., Cope, L., Bolstad, B. M. et al. (2004). affy -Analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 20, 307-315. https://doi.org/10.1093/bioinformatics/btg405.
-
(2004)
Bioinformatics
, vol.20
, pp. 307-315
-
-
Gautier, L.1
Cope, L.2
Bolstad, B.M.3
-
25
-
-
84955508349
-
In vitro systems toxicology assessment of a candidate modified risk tobacco product shows reduced toxicity compared to that of a conventional cigarette
-
Gonzalez-Suarez, I., Martin, F., Marescotti, D. et al. (2016). In vitro systems toxicology assessment of a candidate modified risk tobacco product shows reduced toxicity compared to that of a conventional cigarette. Chem Res Toxicol 29, 3-18. https://doi.org/10.1021/acs.chemrestox.5b00321.
-
(2016)
Chem Res Toxicol
, vol.29
, pp. 3-18
-
-
Gonzalez-Suarez, I.1
Martin, F.2
Marescotti, D.3
-
26
-
-
33646777094
-
The nose revisited: A brief review of the comparative structure, function, and toxicologic pathology of the nasal epithelium
-
Harkema, J. R., Carey, S. A. and Wagner, J. G. (2006). The nose revisited: A brief review of the comparative structure, function, and toxicologic pathology of the nasal epithelium. Toxicol Pathol 34, 252-269. https://doi.org/10.1080/01926230600713475.
-
(2006)
Toxicol Pathol
, vol.34
, pp. 252-269
-
-
Harkema, J.R.1
Carey, S.A.2
Wagner, J.G.3
-
28
-
-
84895918030
-
Case study: The role of mechanistic network models in systems toxicology
-
Hoeng, J., Talikka, M., Martin, F. et al. (2014). Case study: The role of mechanistic network models in systems toxicology. Drug Discov Today 19, 183-192. https://doi.org/10.1016/j.drudis.2013.07.023.
-
(2014)
Drug Discov Today
, vol.19
, pp. 183-192
-
-
Hoeng, J.1
Talikka, M.2
Martin, F.3
-
29
-
-
84961289551
-
Orchestrating high-Throughput genomic analysis with Bioconductor
-
Huber, W., Carey, V. J., Gentleman, R. et al. (2015). Orchestrating high-Throughput genomic analysis with Bioconductor. Nat Methods 12, 115-121. https://doi.org/10.1038/nmeth.3252.
-
(2015)
Nat Methods
, vol.12
, pp. 115-121
-
-
Huber, W.1
Carey, V.J.2
Gentleman, R.3
-
30
-
-
0036401287
-
Expression and regulation of xenobiotic-metabolizing cytochrome P450 (CYP) enzymes in human lung
-
Hukkanen, J., Pelkonen, O., Hakkola, J. et al. (2002). Expression and regulation of xenobiotic-metabolizing cytochrome P450 (CYP) enzymes in human lung. Crit Rev Toxicol 32, 391-411. https://doi.org/10.1080/20024091064273.
-
(2002)
Crit Rev Toxicol
, vol.32
, pp. 391-411
-
-
Hukkanen, J.1
Pelkonen, O.2
Hakkola, J.3
-
31
-
-
84900824364
-
Induction of CYP1A1, CYP1A2, CYP1B1, increased oxidative stress and inflammation in the lung and liver tissues of rats exposed to incense smoke
-
Hussain, T., Al-Attas, O. S., Al-Daghri, N. M. et al. (2014). Induction of CYP1A1, CYP1A2, CYP1B1, increased oxidative stress and inflammation in the lung and liver tissues of rats exposed to incense smoke. Mol Cell Biochem 391, 127-136. https://doi.org/10.1007/s11010-014-1995-5.
-
(2014)
Mol Cell Biochem
, vol.391
, pp. 127-136
-
-
Hussain, T.1
Al-Attas, O.S.2
Al-Daghri, N.M.3
-
32
-
-
77956700474
-
Different regulation of cigarette smoke induced inflammation in upper versus lower airways
-
Huvenne, W., Pérez-Novo, C. A., Derycke, L. et al. (2010). Different regulation of cigarette smoke induced inflammation in upper versus lower airways. Respir Res 11, 100. https://doi.org/10.1186/1465-9921-11-100.
-
(2010)
Respir Res
, vol.11
, pp. 100
-
-
Huvenne, W.1
Pérez-Novo, C.A.2
Derycke, L.3
-
33
-
-
0003803673
-
-
International Organization for Standardization ISO 3402
-
International Organization for Standardization ISO 3402 (1999). Tobacco and tobacco products -Atmosphere for conditioning and testing. http://www.iso.org/iso/home/store/catalogue-Tc/catalogue-detail.htm?csnumber=28324.
-
(1999)
Tobacco and Tobacco Products - Atmosphere for Conditioning and Testing
-
-
-
34
-
-
84940643578
-
Impact assessment of cigarette smoke exposure on organotypic bronchial epithelial tissue cultures: A comparison of mono-culture and coculture model containing fibroblasts
-
Iskandar, A. R., Xiang, Y., Frentzel, S. et al. (2015). Impact assessment of cigarette smoke exposure on organotypic bronchial epithelial tissue cultures: A comparison of mono-culture and coculture model containing fibroblasts. Toxicol Sci 147, 207-221. https://doi.org/10.1093/toxsci/kfv122.
-
(2015)
Toxicol Sci
, vol.147
, pp. 207-221
-
-
Iskandar, A.R.1
Xiang, Y.2
Frentzel, S.3
-
35
-
-
84891760956
-
Data, information, knowledge and principle: Back to metabolism in KEGG
-
Kanehisa, M., Goto, S., Sato, Y. et al. (2014). Data, information, knowledge and principle: Back to metabolism in KEGG. Nucleic Acids Res 42, D199-D205. https://doi.org/10.1093/nar/gkt1076.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D199-D205
-
-
Kanehisa, M.1
Goto, S.2
Sato, Y.3
-
36
-
-
59549093642
-
ArrayQualityMetrics -A bioconductor package for quality assessment of microarray data
-
Kauffmann, A., Gentleman, R. and Huber, W. (2009). arrayQualityMetrics -A bioconductor package for quality assessment of microarray data. Bioinformatics 25, 415-416. https://doi.org/10.1093/bioinformatics/btn647.
-
(2009)
Bioinformatics
, vol.25
, pp. 415-416
-
-
Kauffmann, A.1
Gentleman, R.2
Huber, W.3
-
37
-
-
70349999062
-
In vitro cellular models for nasal drug absorption studies
-
C. Ehrhardt and K.-J. Kim (eds.), . Springer US
-
Kim, D.-D. (2008). In vitro cellular models for nasal drug absorption studies. In C. Ehrhardt and K.-J. Kim (eds.), Drug Absorption Studies (216-234). Springer US. https://doi.org/10.1007/978-0-387-74901-3.
-
(2008)
Drug Absorption Studies
, pp. 216-234
-
-
Kim, D.-D.1
-
38
-
-
84891818318
-
MiRBase: Annotating high confidence microRNAs using deep sequencing data
-
Database Issue
-
Kozomara, A. and Griffiths-Jones, S. (2013). miRBase: Annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res 42, Database Issue, D68-D73. https://doi.org/10.1093/nar/gkt1181.
-
(2013)
Nucleic Acids Res
, vol.42
, pp. D68-D73
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
39
-
-
17444392807
-
Inhibition of chloride secretion in human bronchial epithelial cells by cigarette smoke extract
-
Kreindler, J. L., Jackson, A. D., Kemp, P. A. et al. (2005). Inhibition of chloride secretion in human bronchial epithelial cells by cigarette smoke extract. Am J Physiol Lung Cell Mol Physiol 288, L894-L902. https://doi.org/10.1152/ajplung.00376.2004.
-
(2005)
Am J Physiol Lung Cell Mol Physiol
, vol.288
, pp. L894-L902
-
-
Kreindler, J.L.1
Jackson, A.D.2
Kemp, P.A.3
-
40
-
-
77953994301
-
Toxicity testing in the 21st century: A vision and a strategy
-
Krewski, D., Acosta, D., Andersen, M. et al. (2010). Toxicity testing in the 21st century: A vision and a strategy. J Toxicol Environ Health B Crit Rev 13, 51-138. https://doi.org/10.1080/10937404.2010.483176.
-
(2010)
J Toxicol Environ Health B Crit Rev
, vol.13
, pp. 51-138
-
-
Krewski, D.1
Acosta, D.2
Andersen, M.3
-
41
-
-
0036381162
-
Tobacco use and cancer causation: Association by tumour type
-
Kuper, H., Boffetta, P. and Adami, H. O. (2002). Tobacco use and cancer causation: Association by tumour type. J Intern Med 252, 206-224.
-
(2002)
J Intern Med
, vol.252
, pp. 206-224
-
-
Kuper, H.1
Boffetta, P.2
Adami, H.O.3
-
42
-
-
34249815233
-
Cigarette smoke extract induces cytotoxicity on human nasal epithelial cells
-
Lan, M.-Y., Ho, C.-Y., Lee, T.-C. et al. (2007). Cigarette smoke extract induces cytotoxicity on human nasal epithelial cells. Am J Rhinol Allergy 21, 218-223. https://doi.org/10.2500/ajr.2007.21.2966.
-
(2007)
Am J Rhinol Allergy
, vol.21
, pp. 218-223
-
-
Lan, M.-Y.1
Ho, C.-Y.2
Lee, T.-C.3
-
43
-
-
84875030059
-
Cigarette smoke inhibits nasal airway epithelial cell growth and survival
-
Lee, H. S. and Kim, J. (2013). Cigarette smoke inhibits nasal airway epithelial cell growth and survival. Int Forum Allergy Rhinol 3, 188-192. https://doi.org/10.1002/alr.21129.
-
(2013)
Int Forum Allergy Rhinol
, vol.3
, pp. 188-192
-
-
Lee, H.S.1
Kim, J.2
-
44
-
-
77954063235
-
Smoking is associated with shortened airway cilia
-
Leopold, P. L., O'Mahony, M. J., Lian, X. J. et al. (2009). Smoking is associated with shortened airway cilia. PLoS One 4, e8157. https://doi.org/10.1371/journal.pone.0008157.
-
(2009)
PLoS One
, vol.4
, pp. e8157
-
-
Leopold, P.L.1
O'Mahony, M.J.2
Lian, X.J.3
-
45
-
-
84912040850
-
Characterization of the Vitrocell® 24/48 in vitro aerosol exposure system using mainstream cigarette smoke
-
Majeed, S., Frentzel, S., Wagner, S. et al. (2014). Characterization of the Vitrocell® 24/48 in vitro aerosol exposure system using mainstream cigarette smoke. Chem Cent J 8, 1-11. https://doi.org/10.1186/s13065-014-0062-3.
-
(2014)
Chem Cent J
, vol.8
, pp. 1-11
-
-
Majeed, S.1
Frentzel, S.2
Wagner, S.3
-
46
-
-
84929941810
-
Toxicity assessment of tobacco products in vitro
-
Manuppello, J. R. and Sullivan, K. M. (2015). Toxicity assessment of tobacco products in vitro. Altern Lab Anim 43, 39-67.
-
(2015)
Altern Lab Anim
, vol.43
, pp. 39-67
-
-
Manuppello, J.R.1
Sullivan, K.M.2
-
47
-
-
84861643512
-
Assessment of network perturbation amplitudes by applying high-Throughput data to causal biological networks
-
Martin, F., Thomson, T., Sewer, A. et al. (2012). Assessment of network perturbation amplitudes by applying high-Throughput data to causal biological networks. BMC Systems Biology 6, 54. https://doi.org/10.1186/1752-0509-6-54.
-
(2012)
BMC Systems Biology
, vol.6
, pp. 54
-
-
Martin, F.1
Thomson, T.2
Sewer, A.3
-
48
-
-
84904074764
-
Quantification of biological network perturbations for mechanistic insight and diagnostics using two-layer causal models
-
Martin, F., Sewer, A., Talikka, M. et al. (2014). Quantification of biological network perturbations for mechanistic insight and diagnostics using two-layer causal models. BMC Bioinformatics 15, 238. https://doi.org/10.1186/1471-2105-15-238.
-
(2014)
BMC Bioinformatics
, vol.15
, pp. 238
-
-
Martin, F.1
Sewer, A.2
Talikka, M.3
-
49
-
-
33646592588
-
Cigarette smoke disrupts VEGF165-VEGFR-2 receptor signaling complex in rat lungs and patients with COPD: Morphological impact of VEGFR-2 inhibition
-
Marwick, J. A., Stevenson, C. S., Giddings, J. et al. (2006). Cigarette smoke disrupts VEGF165-VEGFR-2 receptor signaling complex in rat lungs and patients with COPD: Morphological impact of VEGFR-2 inhibition. Am J Physiol Lung Cell Mol Physiol 290, L897-L908. https://doi.org/10.1152/ajplung.00116.2005.
-
(2006)
Am J Physiol Lung Cell Mol Physiol
, vol.290
, pp. L897-L908
-
-
Marwick, J.A.1
Stevenson, C.S.2
Giddings, J.3
-
50
-
-
84878227954
-
Human bronchial epithelial cells exposed in vitro to cigarette smoke at the air-liquid interface resemble bronchial epithelium from human smokers
-
Mathis, C., Poussin, C., Weisensee, D. et al. (2013). Human bronchial epithelial cells exposed in vitro to cigarette smoke at the air-liquid interface resemble bronchial epithelium from human smokers. Am J Physiol Lung Cell Mol Physiol 304, L489-L503. https://doi.org/10.1152/ajplung.00181.2012.
-
(2013)
Am J Physiol Lung Cell Mol Physiol
, vol.304
, pp. L489-L503
-
-
Mathis, C.1
Poussin, C.2
Weisensee, D.3
-
51
-
-
77749291770
-
Frozen robust multiarray analysis (fRMA)
-
McCall, M. N., Bolstad, B. M. and Irizarry, R. A. (2010). Frozen robust multiarray analysis (fRMA). Biostatistics 11, 242-253. https://doi.org/10.1093/biostatistics/kxp059.
-
(2010)
Biostatistics
, vol.11
, pp. 242-253
-
-
McCall, M.N.1
Bolstad, B.M.2
Irizarry, R.A.3
-
52
-
-
67649729608
-
A novel and universal method for microRNA RT-qPCR data normalization
-
Mestdagh, P., Van Vlierberghe, P., De Weer, A. et al. (2009). A novel and universal method for microRNA RT-qPCR data normalization. Genome Biol 10, 1-10. https://doi.org/10.1186/gb-2009-10-6-r64.
-
(2009)
Genome Biol
, vol.10
, pp. 1-10
-
-
Mestdagh, P.1
Van Vlierberghe, P.2
De Weer, A.3
-
53
-
-
77957562702
-
Cigarette smoking increases risk of recurrence for sinonasal inverted papilloma
-
Moon, I. J., Lee, D. Y., Suh, M. W. et al. (2010). Cigarette smoking increases risk of recurrence for sinonasal inverted papilloma. Am J Rhinol Allergy 24, 325-329. https://doi.org/10.2500/ajra.2010.24.3510.
-
(2010)
Am J Rhinol Allergy
, vol.24
, pp. 325-329
-
-
Moon, I.J.1
Lee, D.Y.2
Suh, M.W.3
-
54
-
-
84871780523
-
Toward improved understanding of the ethical and clinical issues surrounding mandatory research biopsies
-
Peppercorn, J. (2013). Toward improved understanding of the ethical and clinical issues surrounding mandatory research biopsies. J Clin Oncol 31, 1-2. https://doi.org/10.1200/jco.2012.44.8589.
-
(2013)
J Clin Oncol
, vol.31
, pp. 1-2
-
-
Peppercorn, J.1
-
55
-
-
84960118088
-
An 8-month systems toxicology inhalation/cessation study in Apoe-/- Mice to investigate cardiovascular and respiratory exposure effects of a candidate modified risk tobacco product, THS 2.2, compared with conventional cigarettes
-
Phillips, B., Veljkovic, E., Boué, S. et al. (2016). An 8-month systems toxicology inhalation/cessation study in Apoe-/- Mice to investigate cardiovascular and respiratory exposure effects of a candidate modified risk tobacco product, THS 2.2, compared with conventional cigarettes. Toxicol Sci 149, 411- 432. https://doi.org/10.1093/toxsci/kfv243.
-
(2016)
Toxicol Sci
, vol.149
, pp. 411-432
-
-
Phillips, B.1
Veljkovic, E.2
Boué, S.3
-
56
-
-
84859892863
-
MicroRNA profiling: Approaches and considerations
-
Pritchard, C. C., Cheng, H. H. and Tewari, M. (2012). MicroRNA profiling: Approaches and considerations. Nat Rev Genet 13, 358-369. http://www.nature.com/nrg/journal/v13/n5/suppinfo/nrg3198-S1.html.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 358-369
-
-
Pritchard, C.C.1
Cheng, H.H.2
Tewari, M.3
-
57
-
-
84973418649
-
-
R Core Team . R Foundation for Statistical Computing, Vienna, Austria
-
R Core Team (2013). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/.
-
(2013)
R: A Language and Environment for Statistical Computing
-
-
-
58
-
-
84926507971
-
Limma powers differential expression analyses for RNA-sequencing and microarray studies
-
Ritchie, M. E., Phipson, B., Wu, D. et al. (2015). limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucl Acids Res 43, e47. https://doi.org/10.1093/nar/gkv007.
-
(2015)
Nucl Acids Res
, vol.43
, pp. e47
-
-
Ritchie, M.E.1
Phipson, B.2
Wu, D.3
-
59
-
-
84938603406
-
Toxicity testing in the 21st century beyond environmental chemicals
-
Rovida, C., Asakura, S., Daneshian, M. et al. (2015). Toxicity testing in the 21st century beyond environmental chemicals. ALTEX 32, 171-181. https://doi.org/10.14573/altex.1506201.
-
(2015)
ALTEX
, vol.32
, pp. 171-181
-
-
Rovida, C.1
Asakura, S.2
Daneshian, M.3
-
60
-
-
84856327481
-
Graphite -A Bioconductor package to convert pathway topology to gene network
-
Sales, G., Calura, E., Cavalieri, D. et al. (2012). graphite -A Bioconductor package to convert pathway topology to gene network. BMC Bioinformatics 13, 20. https://doi.org/10.1186/1471-2105-13-20.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 20
-
-
Sales, G.1
Calura, E.2
Cavalieri, D.3
-
61
-
-
75849117102
-
A case-control study of the risk factors associated with sinonasal inverted papilloma
-
Sham, C. L., Lee, D. L., van Hasselt, C. A. et al. (2010). A case-control study of the risk factors associated with sinonasal inverted papilloma. Am J Rhinol Allergy 24, e37-e40. https://doi.org/10.2500/ajra.2010.24.3408.
-
(2010)
Am J Rhinol Allergy
, vol.24
, pp. e37-e40
-
-
Sham, C.L.1
Lee, D.L.2
Van Hasselt, C.A.3
-
62
-
-
69249094643
-
Exposure as part of a systems approach for assessing risk
-
Sheldon, L. S. and Cohen Hubal, E. A. (2009). Exposure as part of a systems approach for assessing risk. Environ Health Perspect 117, 119-1194. https://doi.org/10.1289/ehp.0800407.
-
(2009)
Environ Health Perspect
, vol.117
, pp. 119-1194
-
-
Sheldon, L.S.1
Cohen Hubal, E.A.2
-
63
-
-
84874828597
-
CiliaFA: A research tool for automated, high-Throughput measurement of ciliary beat frequency using freely available software
-
Smith, C., Djakow, J., Free, R. et al. (2012). ciliaFA: A research tool for automated, high-Throughput measurement of ciliary beat frequency using freely available software. Cilia 1, 14. https://doi.org/10.1186/2046-2530-1-14.
-
(2012)
Cilia
, vol.1
, pp. 14
-
-
Smith, C.1
Djakow, J.2
Free, R.3
-
64
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth, G. K. (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3, Article 3. https://doi.org/10.2202/1544-6115.1027.
-
(2004)
Stat Appl Genet Mol Biol
, vol.3
-
-
Smyth, G.K.1
-
65
-
-
46049092364
-
Smoking-induced gene expression changes in the bronchial airway are reflected in nasal and buccal epithelium
-
Sridhar, S., Schembri, F., Zeskind, J. et al. (2008). Smoking-induced gene expression changes in the bronchial airway are reflected in nasal and buccal epithelium. BMC genomics 9, 259. https://doi.org/10.1186/1471-2164-9-259.
-
(2008)
BMC Genomics
, vol.9
, pp. 259
-
-
Sridhar, S.1
Schembri, F.2
Zeskind, J.3
-
66
-
-
0022480584
-
Effect of cigarette smoking on nasal mucociliary clearanceand ciliary beat frequency
-
Stanley, P. J., Wilson, R., Greenstone, M. A. et al. (1986). Effect of cigarette smoking on nasal mucociliary clearanceand ciliary beat frequency. Thorax 41, 519-523. https://doi.org/10.1136/thx.41.7.519.
-
(1986)
Thorax
, vol.41
, pp. 519-523
-
-
Stanley, P.J.1
Wilson, R.2
Greenstone, M.A.3
-
67
-
-
0035908484
-
Lung epithelial proliferation: A biomarker for chemoprevention trials?
-
Szabo, E. (2001). Lung epithelial proliferation: A biomarker for chemoprevention trials? J Natl Cancer Inst 93, 1042-1043. https://doi.org/10.1093/jnci/djm221.
-
(2001)
J Natl Cancer Inst
, vol.93
, pp. 1042-1043
-
-
Szabo, E.1
-
68
-
-
0033045997
-
Sinonasal cancer, occupation, and tobacco smoking in European women and men
-
Mannetje, A., Kogevinas, M., Luce, D. et al. (1999). Sinonasal cancer, occupation, and tobacco smoking in European women and men. Am J Ind Med 36, 101-107. https://doi.org/10.1002/(SICI)1097-0274(199907)36:1<101::AID-AJIM14>3.0.CO;2-A.
-
(1999)
Am J Ind Med
, vol.36
, pp. 101-107
-
-
Mannetje, A.1
Kogevinas, M.2
Luce, D.3
-
69
-
-
84940640214
-
The response of human nasal and bronchial organotypic tissue cultures to repeated whole cigarette smoke exposure
-
Talikka, M., Kostadinova, R., Xiang, Y. et al. (2014). The response of human nasal and bronchial organotypic tissue cultures to repeated whole cigarette smoke exposure. Int J Toxicol 33, 506-517. https://doi.org/10.1177/1091581814551647.
-
(2014)
Int J Toxicol
, vol.33
, pp. 506-517
-
-
Talikka, M.1
Kostadinova, R.2
Xiang, Y.3
-
70
-
-
84877309040
-
Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods
-
Varemo, L., Nielsen, J. and Nookaew, I. (2013). Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods. Nucleic Acids Res 41, 4378-4391. https://doi.org/10.1093/nar/gkt111.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 4378-4391
-
-
Varemo, L.1
Nielsen, J.2
Nookaew, I.3
-
71
-
-
77954392282
-
Exposure to cigarette smoke condensate reduces calcium activated chloride channel transport in primary sinonasal epithelial cultures
-
Virgin, F. W., Azbell, C., Schuster, D. et al. (2010). Exposure to cigarette smoke condensate reduces calcium activated chloride channel transport in primary sinonasal epithelial cultures. Laryngoscope 120, 1465-1469. https://doi.org/10.1002/lary.20930.
-
(2010)
Laryngoscope
, vol.120
, pp. 1465-1469
-
-
Virgin, F.W.1
Azbell, C.2
Schuster, D.3
-
72
-
-
84941087952
-
DIANA-TarBase v7.0: Indexing more than half a million experimentally supported miRNA:mRNA interactions
-
Vlachos, I. S., Paraskevopoulou, M. D., Karagkouni, D. et al. (2015). DIANA-TarBase v7.0: Indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucleic Acids Res 43, D153-D159. https://doi.org/10.1093/nar/gku1215.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D153-D159
-
-
Vlachos, I.S.1
Paraskevopoulou, M.D.2
Karagkouni, D.3
-
73
-
-
79551507626
-
The effect of a low concentration of hypochlorous acid on rhinovirus infection of nasal epithelial cells
-
Yu, M. S., Park, H. W., Kwon, H. J. et al. (2011). The effect of a low concentration of hypochlorous acid on rhinovirus infection of nasal epithelial cells. Am J Rhinol Allergy 25, 40- 44. https://doi.org/10.2500/ajra.2011.25.3545.
-
(2011)
Am J Rhinol Allergy
, vol.25
, pp. 40-44
-
-
Yu, M.S.1
Park, H.W.2
Kwon, H.J.3
|