-
2
-
-
0346687595
-
The riboswitch control of bacterial metabolism
-
Nudler, E. & Mironov, A. S. The riboswitch control of bacterial metabolism. Trends Biochem. Sci. 29, 11-17 (2004).
-
(2004)
Trends Biochem. Sci.
, vol.29
, pp. 11-17
-
-
Nudler, E.1
Mironov, A.S.2
-
3
-
-
2942549198
-
Riboswitches exert genetic control through metabolite-induced conformational change
-
Soukup, G. A. & Soukup, J. K. Riboswitches exert genetic control through metabolite-induced conformational change. Curr. Opin. Struct. Biol. 14, 344-349 (2004).
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 344-349
-
-
Soukup, G.A.1
Soukup, J.K.2
-
4
-
-
0037206833
-
Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
-
Winkler, W., Nahvi, A. & Breaker, R. R. Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 419, 952-956 (2002).
-
(2002)
Nature
, vol.419
, pp. 952-956
-
-
Winkler, W.1
Nahvi, A.2
Breaker, R.R.3
-
5
-
-
0000086322
-
-
ed. Sinnott, M. Academic, San Diego
-
Schowen, R. L. in Comprehensive Biological Catalysis Vol. 2 (ed. Sinnott, M.) 217-266 (Academic, San Diego, 1998).
-
(1998)
Comprehensive Biological Catalysis
, vol.2
, pp. 217-266
-
-
Schowen, R.L.1
-
6
-
-
0038136962
-
Metabolite-binding RNA domains are present in the genes of eukaryotes
-
Sudarsan, N., Barrick, J. E. & Breaker, R. R. Metabolite-binding RNA domains are present in the genes of eukaryotes. RNA 9, 644-647 (2003).
-
(2003)
RNA
, vol.9
, pp. 644-647
-
-
Sudarsan, N.1
Barrick, J.E.2
Breaker, R.R.3
-
7
-
-
0346366823
-
Thiamine-regulated gene expression of Aspergillius oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR
-
Kubodera, T. et al. Thiamine-regulated gene expression of Aspergillius oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR. FEBS Lett. 555, 516-520 (2003).
-
(2003)
FEBS Lett.
, vol.555
, pp. 516-520
-
-
Kubodera, T.1
-
8
-
-
0035859828
-
A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria
-
Miranda-Rios, J., Navarro, M. & Soberón, M. A. A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria. Proc. Natl Acad. Sci. USA 98, 9736-9741 (2001).
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 9736-9741
-
-
Miranda-Rios, J.1
Navarro, M.2
Soberón, M.A.3
-
9
-
-
2242446202
-
Comparative genomics of thiamin biosynthesis in prokaryotes. New genes and regulatory mechanisms
-
Rodionov, D. A., Vitreschak, A. G., Mironov, A. A. & Gelfand, M. S. Comparative genomics of thiamin biosynthesis in prokaryotes. New genes and regulatory mechanisms. J. Biol. Chem. 277, 48949-48959 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 48949-48959
-
-
Rodionov, D.A.1
Vitreschak, A.G.2
Mironov, A.A.3
Gelfand, M.S.4
-
10
-
-
0036753365
-
Genetic control by a metabolite binding mRNA
-
Nahvi, A. et al. Genetic control by a metabolite binding mRNA. Chem. Biol. 9, 1043-1049 (2002).
-
(2002)
Chem. Biol.
, vol.9
, pp. 1043-1049
-
-
Nahvi, A.1
-
11
-
-
18744396047
-
Sensing small molecules by nascent RNA: A mechanism to control transcription in bacteria
-
Mironov, A. S. et al. Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria. Cell 111, 747-756 (2002).
-
(2002)
Cell
, vol.111
, pp. 747-756
-
-
Mironov, A.S.1
-
12
-
-
0037058920
-
An mRNA structure that controls gene expression by binding FMN
-
Winkler, W. C., Cohen-Chalamish, S. & Breaker, R. R. An mRNA structure that controls gene expression by binding FMN. Proc. Natl Acad. Sci. USA 99, 15908-15913 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 15908-15913
-
-
Winkler, W.C.1
Cohen-Chalamish, S.2
Breaker, R.R.3
-
13
-
-
0038210214
-
Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria
-
Mandal, M., Boese, B., Barrick, J. E., Winkler, W. C. & Breaker, R. R. Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria. Cell 113, 577-586 (2003).
-
(2003)
Cell
, vol.113
, pp. 577-586
-
-
Mandal, M.1
Boese, B.2
Barrick, J.E.3
Winkler, W.C.4
Breaker, R.R.5
-
14
-
-
17444403921
-
Metabolic monitoring by bacterial mRNAs
-
Winkler, W. C. Metabolic monitoring by bacterial mRNAs. Arch. Microbiol. 183, 151-159 (2005).
-
(2005)
Arch. Microbiol.
, vol.183
, pp. 151-159
-
-
Winkler, W.C.1
-
15
-
-
1642586299
-
Control of gene expression by a natural metabolite-responsive ribozyme
-
Winkler, W. C., Nahvi, A., Roth, A., Collins, J. A. & Breaker, R. R. Control of gene expression by a natural metabolite-responsive ribozyme. Nature 428, 281-286 (2004).
-
(2004)
Nature
, vol.428
, pp. 281-286
-
-
Winkler, W.C.1
Nahvi, A.2
Roth, A.3
Collins, J.A.4
Breaker, R.R.5
-
16
-
-
9244225713
-
Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine
-
Batey, R. B., Gilbert, S. D. & Montagne, R. K. Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine. Nature 432, 411-415 (2004).
-
(2004)
Nature
, vol.432
, pp. 411-415
-
-
Batey, R.B.1
Gilbert, S.D.2
Montagne, R.K.3
-
17
-
-
10644250950
-
Structural basis for discriminative regulation of gene expression by adenine- And guanine-sensing mRNAs
-
Serganov, A. et al. Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs. Chem. Biol. 11, 1729-1741 (2004).
-
(2004)
Chem. Biol.
, vol.11
, pp. 1729-1741
-
-
Serganov, A.1
-
18
-
-
1542498400
-
Anion binding to nucleic acids
-
Auffinger, P., Bielecki, L. & Westhof, E. Anion binding to nucleic acids. Structure 12, 379-388 (2004).
-
(2004)
Structure
, vol.12
, pp. 379-388
-
-
Auffinger, P.1
Bielecki, L.2
Westhof, E.3
-
19
-
-
28844492215
-
Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine
-
Sudarsan, N., Cohen-Chalamish, S., Nakamura, S., Emilsson, G. M. & Breaker, R. R. Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine. Chem. Biol. 12, 1325-1335 (2005).
-
(2005)
Chem. Biol.
, vol.12
, pp. 1325-1335
-
-
Sudarsan, N.1
Cohen-Chalamish, S.2
Nakamura, S.3
Emilsson, G.M.4
Breaker, R.R.5
-
20
-
-
0036717041
-
Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs
-
Nagaswamy, U. & Fox, G. E. Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs. RNA 8, 1112-1119 (2002).
-
(2002)
RNA
, vol.8
, pp. 1112-1119
-
-
Nagaswamy, U.1
Fox, G.E.2
-
21
-
-
18144365521
-
2+ in TPP-dependent riboswitch
-
2+ in TPP-dependent riboswitch. FEBS Lett. 579, 2583-2588 (2005).
-
(2005)
FEBS Lett.
, vol.579
, pp. 2583-2588
-
-
Yamauchi, T.1
-
22
-
-
0034704217
-
The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit
-
Brodersen, D. E. et al. The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. Cell 103, 1143-1154 (2000).
-
(2000)
Cell
, vol.103
, pp. 1143-1154
-
-
Brodersen, D.E.1
-
23
-
-
0035950132
-
Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria
-
Schlunzen, F. et al. Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria. Nature 413, 814-821 (2001).
-
(2001)
Nature
, vol.413
, pp. 814-821
-
-
Schlunzen, F.1
-
24
-
-
17744377418
-
Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3
-
Pioletti, M. et al. Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3. EMBO J. 20, 1829-1839 (2001).
-
(2001)
EMBO J.
, vol.20
, pp. 1829-1839
-
-
Pioletti, M.1
-
25
-
-
0035942248
-
RNA tertiary interactions in the large ribosomal subunit: The A-minor motif
-
Nissen, P., Ippolito, J. A., Ban, N., Moore, P. B. & Steitz, T. A. RNA tertiary interactions in the large ribosomal subunit: the A-minor motif. Proc. Natl Acad. Sci. USA 98, 4899-4903 (2001).
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 4899-4903
-
-
Nissen, P.1
Ippolito, J.A.2
Ban, N.3
Moore, P.B.4
Steitz, T.A.5
-
26
-
-
0242298623
-
An mRNA structure in bacteria that controls gene expression by binding lysine
-
Sudarsan, N., Wickiser, J. K., Nakamura, S., Ebert, M. S. & Breaker, R. R. An mRNA structure in bacteria that controls gene expression by binding lysine. Genes Dev. 17, 2688-2697 (2003).
-
(2003)
Genes Dev.
, vol.17
, pp. 2688-2697
-
-
Sudarsan, N.1
Wickiser, J.K.2
Nakamura, S.3
Ebert, M.S.4
Breaker, R.R.5
-
27
-
-
0036897328
-
A (ribo) switch in the paradigms of genetic regulation
-
Hesselberth, J. R. & Ellington, A. D. A (ribo) switch in the paradigms of genetic regulation. Nature Struct. Biol. 9, 891-893 (2002).
-
(2002)
Nature Struct. Biol.
, vol.9
, pp. 891-893
-
-
Hesselberth, J.R.1
Ellington, A.D.2
-
29
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A. & Dodson, E. J. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D 53, 240-245 (1997).
-
(1997)
Acta Crystallogr. D
, vol.53
, pp. 240-245
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
30
-
-
0037447159
-
Ribosomal protein S15 represses its own translation via adaptation of an rRNA-like fold within its mRNA
-
Serganov, A., Polonskaia, A., Ehresmann, B., Ehresmann, C. & Patel, D. J. Ribosomal protein S15 represses its own translation via adaptation of an rRNA-like fold within its mRNA. EMBO J. 22, 1898-1908 (2003).
-
(2003)
EMBO J.
, vol.22
, pp. 1898-1908
-
-
Serganov, A.1
Polonskaia, A.2
Ehresmann, B.3
Ehresmann, C.4
Patel, D.J.5
|