Fixed target combined with spectral mapping: Approaching 100% hit rates for serial crystallography

Acta Crystallographica Section D: Structural Biology

Volumn 72, Issue 8, 2016, Pages 944-955

  Oghbaey, Saeed ^a   Sarracini, Antoine ^a   Ginn, Helen M ^b,c   Pare Labrosse, Olivier ^a   Kuo, Anling ^d   Marx, Alexander ^e   Epp, Sascha W ^e   Sherrell, Darren A ^c   Eger, Bryan T ^d   Zhong, Yinpeng ^e   Loch, Rolf ^e   Mariani, Valerio ^f   Alonso Mori, Roberto ^g   Nelson, Silke ^g   Lemke, Henrik T ^g   Owen, Robin L ^c   Pearson, Arwen R ^h   Stuart, David I ^b,c   Ernst, Oliver P ^d   Mueller Werkmeister, Henrike M ^a,d,e   Miller, R J Dwayne ^a,e,h   more..

^a UNIVERSITY OF TORONTO   (Canada)

^b UNIVERSITY OF OXFORD   (United Kingdom)

^c DIAMOND LIGHT SOURCE LTD   (United Kingdom)

^d UNIVERSITY OF TORONTO   (Canada)

^e MAX PLANCK INSTITUTE FOR THE STRUCTURE AND DYNAMICS OF MATTER   (Germany)

^f DESY   (Germany)

^g SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

^h UNIVERSITY OF HAMBURG   (Germany)

Author keywords

femtosecond time resolved crystallography; fixed target sample delivery; high throughput serial crystallography; room temperature crystallography

Indexed keywords

MYOGLOBIN; PROTEIN;

ANIMAL; CHEMISTRY; CRYSTALLIZATION; DEVICES; ECONOMICS; EQUIPMENT DESIGN; PROCEDURES; SPERM WHALE; TEMPERATURE; TIME FACTOR; X RAY CRYSTALLOGRAPHY;

ANIMALS; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; EQUIPMENT DESIGN; MYOGLOBIN; PROTEINS; SPERM WHALE; TEMPERATURE; TIME FACTORS;

EID: 85008967214     PISSN: None     EISSN: 20597983     Source Type: Journal    
DOI: 10.1107/S2059798316010834     Document Type: Article

References (50)

1. Barends, T. R. M., et al. (2015). Science, 350, 445-450.
2. Barty, A., et al. (2011). Nature Photonics, 6, 35-40.
3. Barty, A., Kirian, R. A., Maia, F. R. N. C., Hantke, M., Yoon, C. H., White, T. A. & Chapman, H. (2014). J. Appl. Cryst. 47, 1118-1131.
4. Baxter, E. L., et al. (2016). Acta Cryst. D72, 2-11.
5. Boutet, S., et al. (2012). Science, 337, 362-364.
6. Chapman, H. N., et al. (2011). Nature (London), 470, 73-77.
7. Chollet, M., et al. (2015). J. Synchrotron Rad. 22, 503-507.
8. Chreifi, G., Baxter, E. L., Doukov, T., Cohen, A. E., McPhillips, S. E., Song, J., Meharenna, Y. T., Soltis, S. M. & Poulos, T. L. (2016). Proc. Natl Acad. Sci. USA, 113, 1226-1231.
9. Cohen, A. E., et al. (2014). Proc. Natl Acad. Sci. USA, 111, 17122-17127.
10. Coppens, P., Pitak, M., Gembicky, M., Messerschmidt, M., Scheins, S., Benedict, J., Adachi, S., Sato, T., Nozawa, S., Ichiyanagi, K., Chollet, M. & Koshihara, S. (2009). J. Synchrotron Rad. 16, 226-230.
11. DePonte, D. P., Weierstall, U., Schmidt, K., Warner, J., Starodub, D., Spence, J. C. H. & Doak, R. B. (2008). J. Phys. D Appl. Phys. 41, 195505.
12. Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486-501.
13. Ginn, H. M., Brewster, A. S., Hattne, J., Evans, G., Wagner, A., Grimes, J. M., Sauter, N. K., Sutton, G. & Stuart, D. I. (2015). Acta Cryst. D71, 1400-1410.
14. Ginn, H. M., Evans, G., Sauter, N. K. & Stuart, D. I. (2016). J. Appl. Cryst. 49, 1065-1072.
15. Ginn, H. M., Messerschmidt, M., Ji, X., Zhang, H., Axford, D., Gildea, R. J., Winter, G., Brewster, A. S., Hattne, J., Wagner, A., Grimes, J. M., Evans, G., Sauter, N. K., Sutton, G. & Stuart, D. I. (2015). Nature Commun. 6, 6435.
16. Ginn, H. M., Roedig, P., Kuo, A., Evans, G., Sauter, N. K., Ernst, O., Meents, A., Muller-Werkmeister, H., Miller, R. J. D. & Stuart, D. I. (2016). Acta Cryst. D72, 956-965.
17. Guha, S., Perry, S. L., Pawate, A. S. & Kenis, P. J. A. (2012). Sens. Actuators B Chem. 174, 1-9.
18. Hirata, K., et al. (2014). Nature Methods, 11, 734-736.
19. Hunter, M. S., et al. (2014). Sci. Rep. 4, 6026.
20. Kabsch, W. (2010). Acta Cryst. D66, 125-132.
21. Keedy, D. A., et al. (2015). Elife, 4, e07574.
22. Kern, J., et al. (2014). Nature Commun. 5, 4371.
23. Kirchner, F. O., Lahme, S., Riedle, E. & Baum, P. (2014). AIP Adv. 4, 077134.
24. Li, T., Quillin, M. L., Phillips, G. N. Jr & Olson, J. S. (1994). Biochemistry, 33, 1433-1446.
25. Lyubimov, A. Y., Murray, T. D., Koehl, A., Araci, I. E., Uervirojnangkoorn, M., Zeldin, O. B., Cohen, A. E., Soltis, S. M., Baxter, E. L., Brewster, A. S., Sauter, N. K., Brunger, A. T. & Berger, J. M. (2015). Acta Cryst. D71, 928-940.
26. Mariani, V., Morgan, A., Yoon, C. H., Lane, T. J., White, T. A., O'Grady, C., Kuhn, M., Aplin, S., Koglin, J., Barty, A. & Chapman, H. N. (2016). J. Appl. Cryst. 49, 1073-1080.
27. McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658-674.
28. Mueller, C., et al. (2015). Struct. Dyn. 2, 054302.
29. Murray, T. D., Lyubimov, A. Y., Ogata, C. M., Vo, H., Uervirojnangkoorn, M., Brunger, A. T. & Berger, J. M. (2015). Acta Cryst. D71, 1987-1997.
30. Murshudov, G. N., Skubak, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355-367.
31. Owen, R. L., Yorke, B. A., Gowdy, J. A. & Pearson, A. R. (2011). J. Synchrotron Rad. 18, 367-373.
32. Pearson, A. R., Pahl, R., Kovaleva, E. G., Davidson, V. L. & Wilmot, C. M. (2007). J. Synchrotron Rad. 14, 92-98.
33. Roedig, P., Duman, R., Sanchez-Weatherby, J., Vartiainen, I., Burkhardt, A., Warmer, M., David, C., Wagner, A. & Meents, A. (2016). J. Appl. Cryst. 49, 968-975.
34. Roedig, P., Vartiainen, I., Duman, R., Panneerselvam, S., Stube, N., Lorbeer, O., Warmer, M., Sutton, G., Stuart, D. I., Weckert, E., David, C., Wagner, A. & Meents, A. (2015). Sci. Rep. 5, 10451.
35. Roessler, C. G., et al. (2016). Structure, 24, 631-640.
36. Seidel, H. (1990). J. Electrochem. Soc. 137, 3612-3626.
37. Sherrell, D. A., Foster, A. J., Hudson, L., Nutter, B., O'Hea, J., Nelson, S., Pare-Labrosse, O., Oghbaey, S., Miller, R. J. D. & Owen, R. L. (2015). J. Synchrotron Rad. 22, 1372-1378.
38. Sierra, R. G., et al. (2012). Acta Cryst. D68, 1584-1587.
39. Springer, B. A. & Sligar, S. G. (1987). Proc. Natl Acad. Sci. USA, 84, 8961-8965.
40. Stetten, D. von, Giraud, T., Carpentier, P., Sever, F., Terrien, M., Dobias, F., Juers, D. H., Flot, D., Mueller-Dieckmann, C., Leonard, G. A., de Sanctis, D. & Royant, A. (2015). Acta Cryst. D71, 15-26.
41. Sugahara, M., et al. (2015). Nature Methods, 12, 61-63.
42. Tenboer, J., et al. (2014). Science, 346, 1242-1246.
43. Waterman, D. G., Winter, G., Gildea, R. J., Parkhurst, J. M., Brewster, A. S., Sauter, N. K. & Evans, G. (2016). Acta Cryst. D72, 558-575.
44. Weierstall, U., et al. (2014). Nature Commun. 5, 3309.
45. White, T. A., Kirian, R. A., Martin, A. V., Aquila, A., Nass, K., Barty, A. & Chapman, H. N. (2012). J. Appl. Cryst. 45, 335-341.
46. Winn, M. D., et al. (2011). Acta Cryst. D67, 235-242.
47. Yang, F. & Phillips, G. N. Jr (1996). J. Mol. Biol. 256, 762-774.
48. Zarrine-Afsar, A., Barends, T. R. M., Muller, C., Fuchs, M. R., Lomb, L., Schlichting, I. & Miller, R. J. D. (2012). Acta Cryst. D68, 321-323.
49. Zeldin, O. B., Gerstel, M. & Garman, E. F. (2013). J. Appl. Cryst. 46, 1225-1230.
50. Zhou, Q., et al. (2015). Nature (London), 525, 62-67.