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Volumn 7, Issue , 2017, Pages

The long non-coding RNA NEAT1 is responsive to neuronal activity and is associated with hyperexcitability states

(30)  Barry, Guy a,b   Briggs, James A c   Hwang, Do Won d,e   Nayler, Sam P c   Fortuna, Patrick R J c   Jonkhout, Nicky b   Dachet, Fabien f   Maag, Jesper L V b,g   Mestdagh, Pieter h   Singh, Erin M i   Avesson, Lotta b   Kaczorowski, Dominik C b   Ozturk, Ezgi j   Jones, Nigel C j   Vetter, Irina c   Arriola Martinez, Luis b   Hu, Jianfei k   Franco, Gloria R b,l   Warn, Victoria M b   Gong, Andrew g   more..


Author keywords

[No Author keywords available]

Indexed keywords

KCNAB2 PROTEIN, HUMAN; KCNIP1 PROTEIN, HUMAN; KV CHANNEL INTERACTING PROTEIN; LONG UNTRANSLATED RNA; NEAT1 LONG NON-CODING RNA, HUMAN; PROTEIN BINDING; VOLTAGE GATED POTASSIUM CHANNEL;

EID: 85008707964     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep40127     Document Type: Article
Times cited : (83)

References (42)
  • 1
    • 84897113426 scopus 로고    scopus 로고
    • Integrating the roles of long and small non-coding RNA in brain function and disease
    • Barry, G. Integrating the roles of long and small non-coding RNA in brain function and disease. Mol Psychiatry. 19, 410-416 (2014).
    • (2014) Mol Psychiatry. , vol.19 , pp. 410-416
    • Barry, G.1
  • 2
    • 84865727393 scopus 로고    scopus 로고
    • The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
    • Derrien, T. et al. The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Genome Res. 22, 1775-1789 (2012).
    • (2012) Genome Res. , vol.22 , pp. 1775-1789
    • Derrien, T.1
  • 3
    • 80052869283 scopus 로고    scopus 로고
    • LincRNAs act in the circuitry controlling pluripotency and differentiation
    • Guttman, M. et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature. 477, 295-300 (2011).
    • (2011) Nature. , vol.477 , pp. 295-300
    • Guttman, M.1
  • 5
    • 84949432853 scopus 로고    scopus 로고
    • Mechanisms of long non-coding RNAs in mammalian nervous system development, plasticity, disease, and evolution
    • Briggs, J. A., Wolvetang, E. J., Mattick, J. S., Rinn, J. L. & Barry, G. Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution. Neuron. 88, 861-877 (2015).
    • (2015) Neuron. , vol.88 , pp. 861-877
    • Briggs, J.A.1    Wolvetang, E.J.2    Mattick, J.S.3    Rinn, J.L.4    Barry, G.5
  • 6
    • 84897108067 scopus 로고    scopus 로고
    • The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing
    • Barry, G. et al. The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing. Mol Psychiatry. 19, 486-494 (2014).
    • (2014) Mol Psychiatry. , vol.19 , pp. 486-494
    • Barry, G.1
  • 7
    • 84857066786 scopus 로고    scopus 로고
    • Modular regulatory principles of large non-coding RNAs
    • Guttman, M. & Rinn, J. L. Modular regulatory principles of large non-coding RNAs. Nature. 482, 339-346 (2012).
    • (2012) Nature. , vol.482 , pp. 339-346
    • Guttman, M.1    Rinn, J.L.2
  • 8
    • 69949132008 scopus 로고    scopus 로고
    • Paraspeckles: Nuclear bodies built on long noncoding RNA
    • Bond, C. S. & Fox, A. H. Paraspeckles: nuclear bodies built on long noncoding RNA. J Cell Biol. 186, 637-644 (2009).
    • (2009) J Cell Biol. , vol.186 , pp. 637-644
    • Bond, C.S.1    Fox, A.H.2
  • 9
    • 84879811291 scopus 로고    scopus 로고
    • The long non-coding RNA nuclear-enriched abundant transcript 1-2 induces paraspeckle formation in the motor neuron during the early phase of amyotrophic lateral sclerosis
    • Nishimoto, Y. et al. The long non-coding RNA nuclear-enriched abundant transcript 1-2 induces paraspeckle formation in the motor neuron during the early phase of amyotrophic lateral sclerosis. Mol Brain. 6, 31 (2013).
    • (2013) Mol Brain. , vol.6 , pp. 31
    • Nishimoto, Y.1
  • 10
    • 68949212914 scopus 로고    scopus 로고
    • Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: Functional role of a nuclear noncoding RNA
    • Chen, L. L. & Carmichael, G. G. Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. Mol Cell. 35, 467-478 (2009).
    • (2009) Mol Cell. , vol.35 , pp. 467-478
    • Chen, L.L.1    Carmichael, G.G.2
  • 11
    • 26844440157 scopus 로고    scopus 로고
    • Regulating gene expression through RNA nuclear retention
    • Prasanth, K. V. et al. Regulating gene expression through RNA nuclear retention. Cell. 123, 249-263 (2005).
    • (2005) Cell. , vol.123 , pp. 249-263
    • Prasanth, K.V.1
  • 12
    • 79955506825 scopus 로고    scopus 로고
    • Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice
    • Nakagawa, S., Naganuma, T., Shioi, G. & Hirose, T. Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol. 193, 31-39 (2011).
    • (2011) J Cell Biol. , vol.193 , pp. 31-39
    • Nakagawa, S.1    Naganuma, T.2    Shioi, G.3    Hirose, T.4
  • 13
    • 84893452948 scopus 로고    scopus 로고
    • Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli
    • Imamura, K. et al. Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli. Mol Cell. 53, 393-406 (2014).
    • (2014) Mol Cell. , vol.53 , pp. 393-406
    • Imamura, K.1
  • 14
    • 84891800602 scopus 로고    scopus 로고
    • NEAT1 long noncoding RNA regulates transcription via protein sequestration within subnuclear bodies
    • Hirose, T. et al. NEAT1 long noncoding RNA regulates transcription via protein sequestration within subnuclear bodies. Mol Biol Cell. 25, 169-183 (2014).
    • (2014) Mol Biol Cell. , vol.25 , pp. 169-183
    • Hirose, T.1
  • 15
    • 84862908875 scopus 로고    scopus 로고
    • The genomic binding sites of a noncoding RNA
    • Simon, M. D. et al. The genomic binding sites of a noncoding RNA. Proc Natl Acad Sci USA. 108, 20497-20502 (2011).
    • (2011) Proc Natl Acad Sci USA. , vol.108 , pp. 20497-20502
    • Simon, M.D.1
  • 16
    • 84862321638 scopus 로고    scopus 로고
    • Rapid identification of monospecific monoclonal antibodies using a human proteome microarray
    • Jeong, J. S. et al. Rapid identification of monospecific monoclonal antibodies using a human proteome microarray. Mol Cell Proteomics. 11, O111 016253 (2012).
    • (2012) Mol Cell Proteomics. , vol.11 , pp. O111
    • Jeong, J.S.1
  • 17
    • 78650884359 scopus 로고    scopus 로고
    • Deletion of the mouse homolog of KCNAB2, a gene linked to monosomy 1p36, results in associative memory impairments and amygdala hyperexcitability
    • Perkowski, J. J. & Murphy, G. G. Deletion of the mouse homolog of KCNAB2, a gene linked to monosomy 1p36, results in associative memory impairments and amygdala hyperexcitability. J Neurosci. 31, 46-54 (2011).
    • (2011) J Neurosci. , vol.31 , pp. 46-54
    • Perkowski, J.J.1    Murphy, G.G.2
  • 18
    • 77955062646 scopus 로고    scopus 로고
    • Roles of KChIP1 in the regulation of GABA-mediated transmission and behavioral anxiety
    • Xia, K. et al. Roles of KChIP1 in the regulation of GABA-mediated transmission and behavioral anxiety. Mol Brain. 3, 23 (2010).
    • (2010) Mol Brain. , vol.3 , pp. 23
    • Xia, K.1
  • 19
    • 0034785511 scopus 로고    scopus 로고
    • Loss of the potassium channel beta-subunit gene, KCNAB2, is associated with epilepsy in patients with 1p36 deletion syndrome
    • Heilstedt, H. A. et al. Loss of the potassium channel beta-subunit gene, KCNAB2, is associated with epilepsy in patients with 1p36 deletion syndrome. Epilepsia. 42, 1103-1111 (2001).
    • (2001) Epilepsia. , vol.42 , pp. 1103-1111
    • Heilstedt, H.A.1
  • 21
    • 12144266963 scopus 로고    scopus 로고
    • Pax6, Tbr2, and Tbr1 are expressed sequentially by radial glia, intermediate progenitor cells, and postmitotic neurons in developing neocortex
    • Englund, C. et al. Pax6, Tbr2, and Tbr1 are expressed sequentially by radial glia, intermediate progenitor cells, and postmitotic neurons in developing neocortex. J Neurosci. 25, 247-251 (2005).
    • (2005) J Neurosci. , vol.25 , pp. 247-251
    • Englund, C.1
  • 22
    • 84883138799 scopus 로고    scopus 로고
    • Nuclear calcium signalling in the regulation of brain function
    • Bading, H. Nuclear calcium signalling in the regulation of brain function. Nat Rev Neurosci. 14, 593-608 (2013).
    • (2013) Nat Rev Neurosci. , vol.14 , pp. 593-608
    • Bading, H.1
  • 23
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102, 15545-15550 (2005).
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 15545-15550
    • Subramanian, A.1
  • 24
    • 33749659140 scopus 로고    scopus 로고
    • Exploration of the genetic architecture of idiopathic generalized epilepsies
    • Hempelmann, A. et al. Exploration of the genetic architecture of idiopathic generalized epilepsies. Epilepsia. 47, 1682-1690 (2006).
    • (2006) Epilepsia. , vol.47 , pp. 1682-1690
    • Hempelmann, A.1
  • 25
    • 84869016176 scopus 로고    scopus 로고
    • Activity-dependent human brain coding/noncoding gene regulatory networks
    • Lipovich, L. et al. Activity-dependent human brain coding/noncoding gene regulatory networks. Genetics. 192, 1133-1148 (2012).
    • (2012) Genetics. , vol.192 , pp. 1133-1148
    • Lipovich, L.1
  • 26
    • 84876665067 scopus 로고    scopus 로고
    • Mechanisms of epileptogenesis: A convergence on neural circuit dysfunction
    • Goldberg, E. M. & Coulter, D. A. Mechanisms of epileptogenesis: a convergence on neural circuit dysfunction. Nat Rev Neurosci. 14, 337-349 (2013).
    • (2013) Nat Rev Neurosci. , vol.14 , pp. 337-349
    • Goldberg, E.M.1    Coulter, D.A.2
  • 28
    • 84863717622 scopus 로고    scopus 로고
    • Hypometabolism precedes limbic atrophy and spontaneous recurrent seizures in a rat model of TLE
    • Jupp, B. et al. Hypometabolism precedes limbic atrophy and spontaneous recurrent seizures in a rat model of TLE. Epilepsia. 53, 1233-1244 (2012).
    • (2012) Epilepsia. , vol.53 , pp. 1233-1244
    • Jupp, B.1
  • 29
    • 84873142737 scopus 로고    scopus 로고
    • Regulators of synaptic transmission: Roles in the pathogenesis and treatment of epilepsy
    • Casillas-Espinosa, P. M., Powell, K. L. & O'Brien, T. J. Regulators of synaptic transmission: roles in the pathogenesis and treatment of epilepsy. Epilepsia. 53 Suppl 9, 41-58 (2012).
    • (2012) Epilepsia. , vol.53 , pp. 41-58
    • Casillas-Espinosa, P.M.1    Powell, K.L.2    O'Brien, T.J.3
  • 30
    • 84873708403 scopus 로고    scopus 로고
    • Ion channels in genetic and acquired forms of epilepsy
    • Lerche, H. et al. Ion channels in genetic and acquired forms of epilepsy. J Physiol. 591, 753-764 (2013).
    • (2013) J Physiol. , vol.591 , pp. 753-764
    • Lerche, H.1
  • 31
    • 84896546765 scopus 로고    scopus 로고
    • The long non-coding RNA NEAT1 is increased in IUGR placentas, leading to potential new hypotheses of IUGR origin/development
    • Gremlich, S. et al. The long non-coding RNA NEAT1 is increased in IUGR placentas, leading to potential new hypotheses of IUGR origin/development. Placenta. 35, 44-49 (2014).
    • (2014) Placenta. , vol.35 , pp. 44-49
    • Gremlich, S.1
  • 32
    • 84874614275 scopus 로고    scopus 로고
    • NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression
    • Zhang, Q., Chen, C. Y., Yedavalli, V. S. & Jeang, K. T. NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression. MBio. 4, e00596-00512 (2013).
    • (2013) MBio. , vol.4
    • Zhang, Q.1    Chen, C.Y.2    Yedavalli, V.S.3    Jeang, K.T.4
  • 34
    • 84908030684 scopus 로고    scopus 로고
    • Human iPSC Neurons Display Activity-Dependent Neurotransmitter Secretion: Aberrant Catecholamine Levels in Schizophrenia Neurons
    • Hook, V. et al. Human iPSC Neurons Display Activity-Dependent Neurotransmitter Secretion: Aberrant Catecholamine Levels in Schizophrenia Neurons. Stem Cell Reports. 3, 531-538 (2014).
    • (2014) Stem Cell Reports. , vol.3 , pp. 531-538
    • Hook, V.1
  • 35
    • 84859914870 scopus 로고    scopus 로고
    • Development and optimization of flipr high throughput calcium assays for ion channels and GPCRs
    • Vetter, I. Development and Optimization of FLIPR High Throughput Calcium Assays for Ion Channels and GPCRs. Adv Exp Med Biol. 740, 45-82 (2012).
    • (2012) Adv Exp Med Biol. , vol.740 , pp. 45-82
    • Vetter, I.1
  • 36
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • Kim, D. et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 14, R36 (2013).
    • (2013) Genome Biol. , vol.14 , pp. R36
    • Kim, D.1
  • 37
    • 84865760395 scopus 로고    scopus 로고
    • GENCODE: The reference human genome annotation for the ENCODE Project
    • Harrow, J. et al. GENCODE: the reference human genome annotation for The ENCODE Project. Genome Res. 22, 1760-1774 (2012).
    • (2012) Genome Res. , vol.22 , pp. 1760-1774
    • Harrow, J.1
  • 38
    • 75249087100 scopus 로고    scopus 로고
    • EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson, M. D., McCarthy, D. J. & Smyth, G. K. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 26, 139-140 (2010).
    • (2010) Bioinformatics. , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 39
    • 84883364264 scopus 로고    scopus 로고
    • Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
    • Anders, S. et al. Count-based differential expression analysis of RNA sequencing data using R and Bioconductor. Nat Protoc. 8, 1765-1786 (2013).
    • (2013) Nat Protoc. , vol.8 , pp. 1765-1786
    • Anders, S.1
  • 40
    • 84867267289 scopus 로고    scopus 로고
    • Layer-specific CREB target gene induction in human neocortical epilepsy
    • Beaumont, T. L., Yao, B., Shah, A., Kapatos, G. & Loeb, J. A. Layer-specific CREB target gene induction in human neocortical epilepsy. J Neurosci. 32, 14389-14401 (2012).
    • (2012) J Neurosci. , vol.32 , pp. 14389-14401
    • Beaumont, T.L.1    Yao, B.2    Shah, A.3    Kapatos, G.4    Loeb, J.A.5
  • 42
    • 37649011458 scopus 로고    scopus 로고
    • Elevated anxiety and depressive-like behavior in a rat model of genetic generalized epilepsy suggesting common causation
    • Jones, N. C. et al. Elevated anxiety and depressive-like behavior in a rat model of genetic generalized epilepsy suggesting common causation. Exp Neurol. 209, 254-260 (2008).
    • (2008) Exp Neurol. , vol.209 , pp. 254-260
    • Jones, N.C.1


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