메뉴 건너뛰기




Volumn 8, Issue 5, 2016, Pages 614-621

Mucosa-attached bacterial community in Crohn’s disease coheres with the clinical disease activity index

Author keywords

[No Author keywords available]

Indexed keywords


EID: 85007473239     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/1758-2229.12411     Document Type: Article
Times cited : (29)

References (50)
  • 1
    • 70949107842 scopus 로고    scopus 로고
    • Inflammatory bowel disease
    • Abraham, C., and Cho, J.H. (2009) Inflammatory bowel disease. N Engl J Med 361: 2066-2078.
    • (2009) N Engl J Med , vol.361 , pp. 2066-2078
    • Abraham, C.1    Cho, J.H.2
  • 2
    • 79959835543 scopus 로고    scopus 로고
    • Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn’s disease using terminal restriction fragment length polymorphism analysis
    • Andoh, A., Imaeda, H., Aomatsu, T., Inatomi, O., Bamba, S., Sasaki, M., et al. (2011) Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn’s disease using terminal restriction fragment length polymorphism analysis. J Gastroenterol 46: 479-486.
    • (2011) J Gastroenterol , vol.46 , pp. 479-486
    • Andoh, A.1    Imaeda, H.2    Aomatsu, T.3    Inatomi, O.4    Bamba, S.5    Sasaki, M.6
  • 5
    • 63749130508 scopus 로고    scopus 로고
    • The diagnosis and treatment of Crohn’s disease and ulcerative colitis
    • Baumgart, D.C. (2009) The diagnosis and treatment of Crohn’s disease and ulcerative colitis. Dtsch Arztebl Int 106: 123-133.
    • (2009) Dtsch Arztebl Int , vol.106 , pp. 123-133
    • Baumgart, D.C.1
  • 6
    • 0017227303 scopus 로고
    • Development of a Crohn’s disease activity index. National Cooperative Crohn’s Disease Study
    • Best, W.R., Becktel, J.M., Singleton, J.W., and Kern, F., Jr (1976) Development of a Crohn’s disease activity index. National Cooperative Crohn’s Disease Study. Gastroenterology 70: 439-444.
    • (1976) Gastroenterology , vol.70 , pp. 439-444
    • Best, W.R.1    Becktel, J.M.2    Singleton, J.W.3    Kern, F.4
  • 8
    • 79955554300 scopus 로고    scopus 로고
    • The commensal microbiota and enteropathogens in the pathogenesis of inflammatory bowel diseases
    • Chassaing, B., and Darfeuille-Michaud, A. (2011) The commensal microbiota and enteropathogens in the pathogenesis of inflammatory bowel diseases. Gastroenterology 140: 1720-1728.
    • (2011) Gastroenterology , vol.140 , pp. 1720-1728
    • Chassaing, B.1    Darfeuille-Michaud, A.2
  • 9
    • 79955561083 scopus 로고    scopus 로고
    • Epidemiology and natural history of inflammatory bowel diseases
    • Cosnes, J., Gower-Rousseau, C., Seksik, P., and Cortot, A. (2011) Epidemiology and natural history of inflammatory bowel diseases. Gastroenterology 140: 1785-1794.
    • (2011) Gastroenterology , vol.140 , pp. 1785-1794
    • Cosnes, J.1    Gower-Rousseau, C.2    Seksik, P.3    Cortot, A.4
  • 12
    • 46749119859 scopus 로고    scopus 로고
    • Molecular analysis of the gut microbiota of identical twins with Crohn’s disease
    • Dicksved, J., Halfvarson, J., Rosenquist, M., Jarnerot, G., Tysk, C., Apajalahti, J., et al. (2008) Molecular analysis of the gut microbiota of identical twins with Crohn’s disease. ISME J 2: 716-727.
    • (2008) ISME J , vol.2 , pp. 716-727
    • Dicksved, J.1    Halfvarson, J.2    Rosenquist, M.3    Jarnerot, G.4    Tysk, C.5    Apajalahti, J.6
  • 14
    • 0030906468 scopus 로고    scopus 로고
    • Fecal beta-d-galactosidase production and Bifidobacteria are decreased in Crohn’s disease
    • Favier, C., Neut, C., Mizon, C., Cortot, A., Colombel, J.F., and Mizon, J. (1997) Fecal beta-d-galactosidase production and Bifidobacteria are decreased in Crohn’s disease. Dig Dis Sci 42: 817-822.
    • (1997) Dig Dis Sci , vol.42 , pp. 817-822
    • Favier, C.1    Neut, C.2    Mizon, C.3    Cortot, A.4    Colombel, J.F.5    Mizon, J.6
  • 15
    • 35348857386 scopus 로고    scopus 로고
    • Molecularphylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
    • Frank, D.N., St Amand, A.L., Feldman, R.A., Boedeker, E.C., Harpaz, N., and Pace, N.R. (2007) Molecularphylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Acad Sci USA 104: 13780-13785.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 13780-13785
    • Frank, D.N.1    St Amand, A.L.2    Feldman, R.A.3    Boedeker, E.C.4    Harpaz, N.5    Pace, N.R.6
  • 16
    • 80052155761 scopus 로고    scopus 로고
    • Investigating the biological and clinical significance of human dysbioses
    • Frank, D.N., Zhu, W., Sartor, R.B., and Li, E. (2011) Investigating the biological and clinical significance of human dysbioses. Trends Microbiol 19: 427-434.
    • (2011) Trends Microbiol , vol.19 , pp. 427-434
    • Frank, D.N.1    Zhu, W.2    Sartor, R.B.3    Li, E.4
  • 17
    • 34748886657 scopus 로고    scopus 로고
    • PAST: Paleontological statistics software package for education and data analysis
    • Hammer, Ø., Harper, D.A.T., Ryan, P.D. (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electron 4: 9 pp.
    • (2001) Palaeontol Electron , vol.4 , pp. 9
    • Hammer, Ø.1    Harper, D.A.T.2    Ryan, P.D.3
  • 18
    • 0035897904 scopus 로고    scopus 로고
    • Association between insertion mutation in NOD2 gene and Crohn’s disease in German and British populations
    • Hampe, J., Cuthbert, A., Croucher, P.J., Mirza, M.M., Mascheretti, S., Fisher, S., et al. (2001) Association between insertion mutation in NOD2 gene and Crohn’s disease in German and British populations. Lancet 357: 1925-1928.
    • (2001) Lancet , vol.357 , pp. 1925-1928
    • Hampe, J.1    Cuthbert, A.2    Croucher, P.J.3    Mirza, M.M.4    Mascheretti, S.5    Fisher, S.6
  • 19
    • 0035978651 scopus 로고    scopus 로고
    • Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn’s disease
    • Hugot, J.P., Chamaillard, M., Zouali, H., Lesage, S., Cezard, J.P., Belaiche, J., et al. (2001) Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn’s disease. Nature 411: 599-603.
    • (2001) Nature , vol.411 , pp. 599-603
    • Hugot, J.P.1    Chamaillard, M.2    Zouali, H.3    Lesage, S.4    Cezard, J.P.5    Belaiche, J.6
  • 20
    • 84904048875 scopus 로고    scopus 로고
    • A decrease of the butyrateproducing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis
    • Machiels, K., Joossens, M., Sabino, J., De Preter, V., Arijs, I., Eeckhaut, V., et al. (2014) A decrease of the butyrateproducing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis. Gut 63: 1275-1283.
    • (2014) Gut , vol.63 , pp. 1275-1283
    • Machiels, K.1    Joossens, M.2    Sabino, J.3    De Preter, V.4    Arijs, I.5    Eeckhaut, V.6
  • 21
    • 84959934640 scopus 로고    scopus 로고
    • Specific members of the predominant gut microbiota predict pouchitis following colectomy and IPAA in UC
    • Machiels, K., Sabino, J., Vandermosten, L., Joossens, M., Arijs, I., de Bruyn, M., et al. (2015) Specific members of the predominant gut microbiota predict pouchitis following colectomy and IPAA in UC. Gut.
    • (2015) Gut
    • Machiels, K.1    Sabino, J.2    Vandermosten, L.3    Joossens, M.4    Arijs, I.5    De Bruyn, M.6
  • 22
    • 30944466824 scopus 로고    scopus 로고
    • Reduced diversity of faecal microbiota in Crohn’s disease revealed by a metagenomic approach
    • Manichanh, C., Rigottier-Gois, L., Bonnaud, E., Gloux, K., Pelletier, E., Frangeul, L., et al. (2006) Reduced diversity of faecal microbiota in Crohn’s disease revealed by a metagenomic approach. Gut 55: 205-211.
    • (2006) Gut , vol.55 , pp. 205-211
    • Manichanh, C.1    Rigottier-Gois, L.2    Bonnaud, E.3    Gloux, K.4    Pelletier, E.5    Frangeul, L.6
  • 24
    • 84922069850 scopus 로고    scopus 로고
    • Escherichia coli in chronic inflammatory bowel diseases: An update on adherent invasive Escherichia coli pathogenicity
    • Martinez-Medina, M., and Garcia-Gil, L.J. (2014) Escherichia coli in chronic inflammatory bowel diseases: an update on adherent invasive Escherichia coli pathogenicity. World J Gastrointest Pathophysiol 5: 213-227.
    • (2014) World J Gastrointest Pathophysiol , vol.5 , pp. 213-227
    • Martinez-Medina, M.1    Garcia-Gil, L.J.2
  • 25
    • 79951836666 scopus 로고    scopus 로고
    • Characterization of bacteria in biopsies of colon and stools by high throughput sequencing of the V2 region of bacterial 16S rRNA gene in human
    • Momozawa, Y., Deffontaine, V., Louis, E., and Medrano, J.F. (2011) Characterization of bacteria in biopsies of colon and stools by high throughput sequencing of the V2 region of bacterial 16S rRNA gene in human. PLoS One 6: e16952.
    • (2011) Plos One , vol.6
    • Momozawa, Y.1    Deffontaine, V.2    Louis, E.3    Medrano, J.F.4
  • 26
    • 59849113547 scopus 로고    scopus 로고
    • Microbes in gastrointestinal health and disease
    • Neish, A.S. (2009) Microbes in gastrointestinal health and disease. Gastroenterology 136: 65-80.
    • (2009) Gastroenterology , vol.136 , pp. 65-80
    • Neish, A.S.1
  • 27
    • 61649087487 scopus 로고    scopus 로고
    • Diversity of mucosa-associated microbiota in active and inactive ulcerative colitis
    • Nishikawa, J., Kudo, T., Sakata, S., Benno, Y., and Sugiyama, T. (2009) Diversity of mucosa-associated microbiota in active and inactive ulcerative colitis. Scand J Gastroenterol 44: 180-186.
    • (2009) Scand J Gastroenterol , vol.44 , pp. 180-186
    • Nishikawa, J.1    Kudo, T.2    Sakata, S.3    Benno, Y.4    Sugiyama, T.5
  • 28
    • 0035978533 scopus 로고    scopus 로고
    • A frameshift mutation in NOD2 associated with susceptibility to Crohn’s disease
    • Ogura, Y., Bonen, D.K., Inohara, N., Nicolae, D.L., Chen, F.F., Ramos, R., et al. (2001) A frameshift mutation in NOD2 associated with susceptibility to Crohn’s disease. Nature 411: 603-606.
    • (2001) Nature , vol.411 , pp. 603-606
    • Ogura, Y.1    Bonen, D.K.2    Inohara, N.3    Nicolae, D.L.4    Chen, F.F.5    Ramos, R.6
  • 29
    • 2342442430 scopus 로고    scopus 로고
    • Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease
    • Ott, S.J., Musfeldt, M., Wenderoth, D.F., Hampe, J., Brant, O., Folsch, U.R., et al. (2004) Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 53: 685-693.
    • (2004) Gut , vol.53 , pp. 685-693
    • Ott, S.J.1    Musfeldt, M.2    Wenderoth, D.F.3    Hampe, J.4    Brant, O.5    Folsch, U.R.6
  • 31
    • 84873739311 scopus 로고    scopus 로고
    • The SILVA ribosomal RNA gene database project: Improved data processing and webbased tools
    • Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., et al. (2013) The SILVA ribosomal RNA gene database project: improved data processing and webbased tools. Nucleic Acids Res 41: D590-D596.
    • (2013) Nucleic Acids Res , vol.41 , pp. D590-D596
    • Quast, C.1    Pruesse, E.2    Yilmaz, P.3    Gerken, J.4    Schweer, T.5    Yarza, P.6
  • 32
    • 84902150181 scopus 로고    scopus 로고
    • Alterations in the intestinal microbiome (Dysbiosis) as a predictor of relapse after infliximab withdrawal in Crohn’s disease
    • Rajca, S., Grondin, V., Louis, E., Vernier-Massouille, G., Grimaud, J.C., Bouhnik, Y., et al. (2014) Alterations in the intestinal microbiome (dysbiosis) as a predictor of relapse after infliximab withdrawal in Crohn’s disease. Inflamm Bowel Dis 20: 978-986.
    • (2014) Inflamm Bowel Dis , vol.20 , pp. 978-986
    • Rajca, S.1    Grondin, V.2    Louis, E.3    Vernier-Massouille, G.4    Grimaud, J.C.5    Bouhnik, Y.6
  • 33
    • 80052580369 scopus 로고    scopus 로고
    • NOD2 is essential for temporal development of intestinal microbial communities
    • Rehman, A., Sina, C., Gavrilova, O., Hasler, R., Ott, S., Baines, J.F., et al. (2011) NOD2 is essential for temporal development of intestinal microbial communities. Gut 60: 1354-1362.
    • (2011) Gut , vol.60 , pp. 1354-1362
    • Rehman, A.1    Sina, C.2    Gavrilova, O.3    Hasler, R.4    Ott, S.5    Baines, J.F.6
  • 34
    • 84890041312 scopus 로고    scopus 로고
    • Explicet: Graphical user interface software for metadata-driven management, analysis and visualization of microbiome data
    • Robertson, C.E., Harris, J.K., Wagner, B.D., Granger, D., Browne, K., Tatem, B., et al. (2013) Explicet: graphical user interface software for metadata-driven management, analysis and visualization of microbiome data. Bioinformatics 29: 3100-3101.
    • (2013) Bioinformatics , vol.29 , pp. 3100-3101
    • Robertson, C.E.1    Harris, J.K.2    Wagner, B.D.3    Granger, D.4    Browne, K.5    Tatem, B.6
  • 35
    • 38649115342 scopus 로고    scopus 로고
    • Microbial influences in inflammatory bowel diseases
    • Sartor, R.B. (2008) Microbial influences in inflammatory bowel diseases. Gastroenterology 134: 577-594.
    • (2008) Gastroenterology , vol.134 , pp. 577-594
    • Sartor, R.B.1
  • 37
    • 84881068658 scopus 로고    scopus 로고
    • The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis
    • Smith, P.M., Howitt, M.R., Panikov, N., Michaud, M., Gallini, C.A., Bohlooly, Y.M., et al. (2013) The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science 341: 569-573.
    • (2013) Science , vol.341 , pp. 569-573
    • Smith, P.M.1    Howitt, M.R.2    Panikov, N.3    Michaud, M.4    Gallini, C.A.5    Bohlooly, Y.M.6
  • 38
    • 55949124035 scopus 로고    scopus 로고
    • Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients
    • Sokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermudez-Humaran, L.G., Gratadoux, J.J., et al. (2008) Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc Natl Acad Sci USA 105: 16731-16736.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 16731-16736
    • Sokol, H.1    Pigneur, B.2    Watterlot, L.3    Lakhdari, O.4    Bermudez-Humaran, L.G.5    Gratadoux, J.J.6
  • 41
    • 39649100206 scopus 로고    scopus 로고
    • Active Crohn’s disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora
    • Swidsinski, A., Loening-Baucke, V., Vaneechoutte, M., and Doerffel, Y. (2008) Active Crohn’s disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora. Inflamm Bowel Dis 14: 147-161.
    • (2008) Inflamm Bowel Dis , vol.14 , pp. 147-161
    • Swidsinski, A.1    Loening-Baucke, V.2    Vaneechoutte, M.3    Doerffel, Y.4
  • 42
    • 84896728998 scopus 로고    scopus 로고
    • A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease
    • Tong, M., Li, X., Wegener Parfrey, L., Roth, B., Ippoliti, A., Wei, B., et al. (2013) A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease. PLoS One 8: e80702.
    • (2013) Plos One , vol.8
    • Tong, M.1    Li, X.2    Wegener Parfrey, L.3    Roth, B.4    Ippoliti, A.5    Wei, B.6
  • 43
    • 84893029775 scopus 로고    scopus 로고
    • Increased proportions of Bifidobacterium and the Lactobacillus group and loss of butyrateproducing bacteria in inflammatory bowel disease
    • Wang, W., Chen, L., Zhou, R., Wang, X., Song, L., Huang, S., et al. (2014) Increased proportions of Bifidobacterium and the Lactobacillus group and loss of butyrateproducing bacteria in inflammatory bowel disease. J Clin Microbiol 52: 398-406.
    • (2014) J Clin Microbiol , vol.52 , pp. 398-406
    • Wang, W.1    Chen, L.2    Zhou, R.3    Wang, X.4    Song, L.5    Huang, S.6
  • 44
    • 7244257312 scopus 로고    scopus 로고
    • NOD2 (CARD15) mutations in Crohn’s disease are associated with diminished mucosal alpha-defensin expression
    • Wehkamp, J., Harder, J., Weichenthal, M., Schwab, M., Schaffeler, E., Schlee, M., et al. (2004) NOD2 (CARD15) mutations in Crohn’s disease are associated with diminished mucosal alpha-defensin expression. Gut 53: 1658-1664.
    • (2004) Gut , vol.53 , pp. 1658-1664
    • Wehkamp, J.1    Harder, J.2    Weichenthal, M.3    Schwab, M.4    Schaffeler, E.5    Schlee, M.6
  • 46
    • 66249129571 scopus 로고    scopus 로고
    • Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn’s disease
    • Willing, B., Halfvarson, J., Dicksved, J., Rosenquist, M., Jarnerot, G., Engstrand, L., et al. (2009) Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn’s disease. Inflamm Bowel Dis 15: 653-660.
    • (2009) Inflamm Bowel Dis , vol.15 , pp. 653-660
    • Willing, B.1    Halfvarson, J.2    Dicksved, J.3    Rosenquist, M.4    Jarnerot, G.5    Engstrand, L.6
  • 47
    • 78649686679 scopus 로고    scopus 로고
    • A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes
    • Willing, B.P., Dicksved, J., Halfvarson, J., Andersson, A.F., Lucio, M., Zheng, Z., et al. (2010) A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes. Gastroenterology 139: 1844-1854 e1.
    • (2010) Gastroenterology , vol.139 , pp. 1844-1854
    • Willing, B.P.1    Dicksved, J.2    Halfvarson, J.3    Ersson, A.F.4    Lucio, M.5    Zheng, Z.6
  • 48
    • 84897377243 scopus 로고    scopus 로고
    • Fecal microbial composition of ulcerative colitis and Crohn’s disease patients in remission and subsequent exacerbation
    • Wills, E.S., Jonkers, D.M., Savelkoul, P.H., Masclee, A.A., Pierik, M.J., and Penders, J. (2014) Fecal microbial composition of ulcerative colitis and Crohn’s disease patients in remission and subsequent exacerbation. PLoS One 9: e90981.
    • (2014) Plos One , vol.9
    • Wills, E.S.1    Jonkers, D.M.2    Savelkoul, P.H.3    Masclee, A.A.4    Pierik, M.J.5    Penders, J.6
  • 49
    • 77955067191 scopus 로고    scopus 로고
    • Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags
    • Wu, G.D., Lewis, J.D., Hoffmann, C., Chen, Y.Y., Knight, R., Bittinger, K., et al. (2010) Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags. BMC Microbiol 10: 206.
    • (2010) BMC Microbiol , vol.10 , pp. 206
    • Wu, G.D.1    Lewis, J.D.2    Hoffmann, C.3    Chen, Y.Y.4    Knight, R.5    Bittinger, K.6
  • 50
    • 0037057687 scopus 로고    scopus 로고
    • Antimicrobial peptides in health and disease
    • Zasloff, M. (2002) Antimicrobial peptides in health and disease. N Engl J Med 347: 1199-1200.
    • (2002) N Engl J Med , vol.347 , pp. 1199-1200
    • Zasloff, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.