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Volumn 21, Issue 116, 2016, Pages 239-250

Expression profiling and functional prediction of long noncoding RNAS in nasopharyngeal nonkeratinizing carcinoma

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATING TRANSCRIPTION FACTOR 4; B LYMPHOCYTE RECEPTOR; CYCLIN DEPENDENT KINASE 4; IMMUNOGLOBULIN A; LONG UNTRANSLATED RNA; MESSENGER RNA; MICRORNA; TRANSCRIPTION FACTOR ZEB1; VASCULOTROPIN A; VIMENTIN; BIOLOGICAL MARKER;

EID: 85007376286     PISSN: 15396509     EISSN: 19447930     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (10)

References (52)
  • 1
    • 80052972698 scopus 로고    scopus 로고
    • The noncoding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting MLL1 to chromatin
    • Bertani S, Sauer S, Bolotin E, Sauer F. The noncoding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting MLL1 to chromatin. Mol Cell 43(6):1040-1046, 2011.
    • (2011) Mol Cell , vol.43 , Issue.6 , pp. 1040-1046
    • Bertani, S.1    Sauer, S.2    Bolotin, E.3    Sauer, F.4
  • 4
    • 85007409997 scopus 로고    scopus 로고
    • Systematic study of novel lncRNAs in different gastrointestinal cancer cells
    • Cao B, Song N, Zhang M, Di C, Yang Y, Lu Y, Chen R, Lu ZJ, Guo M. Systematic study of novel lncRNAs in different gastrointestinal cancer cells. Discov Med 21(115):159-171, 2016.
    • (2016) Discov Med , vol.21 , Issue.115 , pp. 159-171
    • Cao, B.1    Song, N.2    Zhang, M.3    Di, C.4    Yang, Y.5    Lu, Y.6    Chen, R.7    Lu, Z.J.8    Guo, M.9
  • 5
    • 33750532057 scopus 로고    scopus 로고
    • The enigmatic epidemiology of nasopharyngeal carcinoma
    • Chang ET, Adami HO. The enigmatic epidemiology of nasopharyngeal carcinoma. Cancer Epidemiol Biomarkers Prev 15(10):1765-1777, 2006.
    • (2006) Cancer Epidemiol Biomarkers Prev , vol.15 , Issue.10 , pp. 1765-1777
    • Chang, E.T.1    Adami, H.O.2
  • 6
    • 84922372231 scopus 로고    scopus 로고
    • Research Progress on Long Noncoding RNAs
    • Chen X, Zhang D, Luo J, Chen R. Research Progress on Long Noncoding RNAs. Prog Biochem Biophys 41(10):997-1009, 2014.
    • (2014) Prog Biochem Biophys , vol.41 , Issue.10 , pp. 997-1009
    • Chen, X.1    Zhang, D.2    Luo, J.3    Chen, R.4
  • 8
    • 84902141800 scopus 로고    scopus 로고
    • Long noncoding RNAs in cell-fate programming and reprogramming
    • Flynn RA, Chang HY. Long noncoding RNAs in cell-fate programming and reprogramming. Cell Stem Cell 14(6):752-761, 2014.
    • (2014) Cell Stem Cell , vol.14 , Issue.6 , pp. 752-761
    • Flynn, R.A.1    Chang, H.Y.2
  • 9
    • 84920879801 scopus 로고    scopus 로고
    • Long noncoding RNAs (lncRNAs) and the molecular hallmarks of aging
    • Grammatikakis I, Panda AC, Abdelmohsen K, Gorospe M. Long noncoding RNAs (lncRNAs) and the molecular hallmarks of aging. Aging-Us 6(12):992-1009, 2014.
    • (2014) Aging-Us , vol.6 , Issue.12 , pp. 992-1009
    • Grammatikakis, I.1    Panda, A.C.2    Abdelmohsen, K.3    Gorospe, M.4
  • 10
    • 84891906445 scopus 로고    scopus 로고
    • An integrated evolutionary analysis of miRNA-lncRNA in mammals
    • Guo L, Zhao Y, Yang S, Zhang H, Wu Q, Chen F. An integrated evolutionary analysis of miRNA-lncRNA in mammals. Mol Biol Rep 41(1):201-207, 2014.
    • (2014) Mol Biol Rep , vol.41 , Issue.1 , pp. 201-207
    • Guo, L.1    Zhao, Y.2    Yang, S.3    Zhang, H.4    Wu, Q.5    Chen, F.6
  • 11
    • 2942609149 scopus 로고    scopus 로고
    • VisANT: an online visualization and analysis tool for biological interaction data
    • Hu Z, Mellor J, Wu J, Delisi C. VisANT: an online visualization and analysis tool for biological interaction data. BMC Bioinformatics 5:17, 2004.
    • (2004) BMC Bioinformatics , vol.5 , pp. 17
    • Hu, Z.1    Mellor, J.2    Wu, J.3    Delisi, C.4
  • 12
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • Huang Da W, Sherman BT, Lempicki RA. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37(1):1-13, 2009.
    • (2009) Nucleic Acids Res , vol.37 , Issue.1 , pp. 1-13
    • Huang Da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 14
  • 15
    • 84929377217 scopus 로고    scopus 로고
    • Omics-based identification of biomarkers for nasopharyngeal carcinoma
    • Janvilisri T. Omics-based identification of biomarkers for nasopharyngeal carcinoma. Dis Markers 2015:762128, 2015.
    • (2015) Dis Markers , vol.2015
    • Janvilisri, T.1
  • 17
    • 84983786187 scopus 로고    scopus 로고
    • Varying levels of complexity in transcription factor binding motifs
    • Keilwagen J, Grau J. Varying levels of complexity in transcription factor binding motifs. Nucleic Acids Res 43(18):e119, 2015.
    • (2015) Nucleic Acids Res , vol.43 , Issue.18
    • Keilwagen, J.1    Grau, J.2
  • 18
    • 60549111634 scopus 로고    scopus 로고
    • WGCNA: an R package for weighted correlation network analysis
    • Langfelder P, Horvath S. WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics 9:559, 2008.
    • (2008) BMC Bioinformatics , vol.9 , pp. 559
    • Langfelder, P.1    Horvath, S.2
  • 20
    • 84891818924 scopus 로고    scopus 로고
    • starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data
    • Li JH, Liu S, Zhou H, Qu LH, Yang JH. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data. Nucleic Acids Res 42(Database issue):D92-97, 2014b.
    • (2014) Nucleic Acids Res , vol.42 , Issue.DATABASE ISSUE , pp. D92-D97
    • Li, J.H.1    Liu, S.2    Zhou, H.3    Qu, L.H.4    Yang, J.H.5
  • 26
    • 84927629286 scopus 로고    scopus 로고
    • Long non-coding RNA CCAT1 promotes gallbladder cancer development via negative modulation of miRNA-218-5p
    • Ma MZ, Chu BF, Zhang Y, Weng MZ, Qin YY, Gong W, Quan ZW. Long non-coding RNA CCAT1 promotes gallbladder cancer development via negative modulation of miRNA-218-5p. Cell Death Dis 6:e1583, 2015.
    • (2015) Cell Death Dis , vol.6
    • Ma, M.Z.1    Chu, B.F.2    Zhang, Y.3    Weng, M.Z.4    Qin, Y.Y.5    Gong, W.6    Quan, Z.W.7
  • 27
    • 84902760639 scopus 로고    scopus 로고
    • Long non-coding RNA HOTAIR, a c-Myc activated driver of malignancy, negatively regulates miRNA-130a in gallbladder cancer
    • Ma MZ, Li CX, Zhang Y, Weng MZ, Zhang MD, Qin YY, Gong W, Quan ZW. Long non-coding RNA HOTAIR, a c-Myc activated driver of malignancy, negatively regulates miRNA-130a in gallbladder cancer. Mol Cancer 13:156, 2014.
    • (2014) Mol Cancer , vol.13 , pp. 156
    • Ma, M.Z.1    Li, C.X.2    Zhang, Y.3    Weng, M.Z.4    Zhang, M.D.5    Qin, Y.Y.6    Gong, W.7    Quan, Z.W.8
  • 28
    • 84945917596 scopus 로고    scopus 로고
    • Host Gene Expression Is Regulated by Two Types of Noncoding RNAs Transcribed from the Epstein-Barr Virus BamHI A Rightward Transcript Region
    • Marquitz AR, Mathur A, Edwards RH, Raab-Traub N. Host Gene Expression Is Regulated by Two Types of Noncoding RNAs Transcribed from the Epstein-Barr Virus BamHI A Rightward Transcript Region. J Virol 89(22):11256-11268, 2015.
    • (2015) J Virol , vol.89 , Issue.22 , pp. 11256-11268
    • Marquitz, A.R.1    Mathur, A.2    Edwards, R.H.3    Raab-Traub, N.4
  • 31
    • 84875580744 scopus 로고    scopus 로고
    • Long non-coding RNA HOTAIR is an independent prognostic marker for nasopharyngeal carcinoma progression and survival
    • Nie Y, Liu X, Qu S, Song E, Zou H, Gong C. Long non-coding RNA HOTAIR is an independent prognostic marker for nasopharyngeal carcinoma progression and survival. Cancer Sci 104(4):458-464, 2013.
    • (2013) Cancer Sci , vol.104 , Issue.4 , pp. 458-464
    • Nie, Y.1    Liu, X.2    Qu, S.3    Song, E.4    Zou, H.5    Gong, C.6
  • 32
    • 84866859568 scopus 로고    scopus 로고
    • Targeting Jab1/CSN5 in nasopharyngeal carcinoma
    • Pan Y, Claret FX. Targeting Jab1/CSN5 in nasopharyngeal carcinoma. Cancer Lett 326(2):155-160, 2012.
    • (2012) Cancer Lett , vol.326 , Issue.2 , pp. 155-160
    • Pan, Y.1    Claret, F.X.2
  • 33
    • 70149123708 scopus 로고    scopus 로고
    • Genomic and Transcriptional Co-Localization of Protein-Coding and Long Non-Coding RNA Pairs in the Developing Brain
    • Ponjavic J, Oliver PL, Lunter G, Ponting CP. Genomic and Transcriptional Co-Localization of Protein-Coding and Long Non-Coding RNA Pairs in the Developing Brain. Plos Genetics 5(8), 2009.
    • (2009) Plos Genetics , vol.5 , Issue.8
    • Ponjavic, J.1    Oliver, P.L.2    Lunter, G.3    Ponting, C.P.4
  • 34
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn JL, Chang HY. Genome regulation by long noncoding RNAs. Annu Rev Biochem 81:145-166, 2012.
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 35
  • 37
    • 84938598752 scopus 로고    scopus 로고
    • Long noncoding RNA-LET, which is repressed by EZH2, inhibits cell proliferation and induces apoptosis of nasopharyngeal carcinoma cell
    • Sun Q, Liu H, Li L, Zhang S, Liu K, Liu Y, Yang C. Long noncoding RNA-LET, which is repressed by EZH2, inhibits cell proliferation and induces apoptosis of nasopharyngeal carcinoma cell. Med Oncol 32(9):673, 2015.
    • (2015) Med Oncol , vol.32 , Issue.9 , pp. 673
    • Sun, Q.1    Liu, H.2    Li, L.3    Zhang, S.4    Liu, K.5    Liu, Y.6    Yang, C.7
  • 38
    • 0347593987 scopus 로고    scopus 로고
    • Mimicry of pre-B cell receptor signaling by activation of the tyrosine kinase Blk
    • Tretter T, Ross AE, Dordai DI, Desiderio S. Mimicry of pre-B cell receptor signaling by activation of the tyrosine kinase Blk. J Exp Med 198(12):1863-1873, 2003.
    • (2003) J Exp Med , vol.198 , Issue.12 , pp. 1863-1873
    • Tretter, T.1    Ross, A.E.2    Dordai, D.I.3    Desiderio, S.4
  • 39
    • 0034001431 scopus 로고    scopus 로고
    • Augmentation of leukocyte infiltration in murine tumors expressing B-cell derived but not nasopharyngeal carcinoma derived EBV membrane protein LMP1
    • Trivedi P, Cuomo L, Christensson B, Hu LF, Morrone S, Frati L, Faggioni A, Winberg G, Klein G. Augmentation of leukocyte infiltration in murine tumors expressing B-cell derived but not nasopharyngeal carcinoma derived EBV membrane protein LMP1. J Med Virol 60(4):417-424, 2000.
    • (2000) J Med Virol , vol.60 , Issue.4 , pp. 417-424
    • Trivedi, P.1    Cuomo, L.2    Christensson, B.3    Hu, L.F.4    Morrone, S.5    Frati, L.6    Faggioni, A.7    Winberg, G.8    Klein, G.9
  • 40
    • 84937758608 scopus 로고    scopus 로고
    • The role of Epstein-Barr virus infection in the pathogenesis of nasopharyngeal carcinoma
    • Tsang CM, Tsao SW. The role of Epstein-Barr virus infection in the pathogenesis of nasopharyngeal carcinoma. Virol Sin 30(2):107-121, 2015.
    • (2015) Virol Sin , vol.30 , Issue.2 , pp. 107-121
    • Tsang, C.M.1    Tsao, S.W.2
  • 43
    • 84938265188 scopus 로고    scopus 로고
    • Transcriptome profiling of esophageal squamous cell carcinoma reveals a long noncoding RNA acting as a tumor suppressor
    • Wei G, Luo H, Sun Y, Li J, Tian L, Liu W, Liu L, Luo J, He J, Chen R. Transcriptome profiling of esophageal squamous cell carcinoma reveals a long noncoding RNA acting as a tumor suppressor. Oncotarget 6(19):17065-17080, 2015.
    • (2015) Oncotarget , vol.6 , Issue.19 , pp. 17065-17080
    • Wei, G.1    Luo, H.2    Sun, Y.3    Li, J.4    Tian, L.5    Liu, W.6    Liu, L.7    Luo, J.8    He, J.9    Chen, R.10
  • 44
    • 20444472028 scopus 로고    scopus 로고
    • Nasopharyngeal carcinoma
    • Wei WI, Sham JS. Nasopharyngeal carcinoma. Lancet 365(9476):2041-2054, 2005.
    • (2005) Lancet , vol.365 , Issue.9476 , pp. 2041-2054
    • Wei, W.I.1    Sham, J.S.2
  • 45
    • 33947638376 scopus 로고    scopus 로고
    • Association of transforming growth factor-beta 1 gene polymorphisms with genetic susceptibility to nasopharyngeal carcinoma
    • Wei YS, Zhu YH, Du B, Yang ZH, Liang WB, Lv ML, Kuang XH, Tai SH, Zhao Y, Zhang L. Association of transforming growth factor-beta 1 gene polymorphisms with genetic susceptibility to nasopharyngeal carcinoma. Clinica Chimica Acta 380(1-2):165-169, 2007.
    • (2007) Clinica Chimica Acta , vol.380 , Issue.1-2 , pp. 165-169
    • Wei, Y.S.1    Zhu, Y.H.2    Du, B.3    Yang, Z.H.4    Liang, W.B.5    Lv, M.L.6    Kuang, X.H.7    Tai, S.H.8    Zhao, Y.9    Zhang, L.10
  • 48
    • 84929133158 scopus 로고    scopus 로고
    • Genome-wide analysis of long non-coding RNA in primary nasopharyngeal carcinoma by microarray
    • Yang QQ, Deng YF. Genome-wide analysis of long non-coding RNA in primary nasopharyngeal carcinoma by microarray. Histopathology 66(7):1022-1030, 2015.
    • (2015) Histopathology , vol.66 , Issue.7 , pp. 1022-1030
    • Yang, Q.Q.1    Deng, Y.F.2
  • 49
    • 84898723075 scopus 로고    scopus 로고
    • Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency
    • Yang YW, Flynn RA, Chen Y, Qu K, Wan B, Wang KC, Lei M, Chang HY. Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency. Elife 3:e02046, 2014.
    • (2014) Elife , vol.3
    • Yang, Y.W.1    Flynn, R.A.2    Chen, Y.3    Qu, K.4    Wan, B.5    Wang, K.C.6    Lei, M.7    Chang, H.Y.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.