메뉴 건너뛰기




Volumn 41, Issue 10, 2014, Pages 997-1009

Research progress on long noncoding RNAs

Author keywords

Development and reprogramming; Epigenetic regulation; Long noncoding RNA; Mechanism; Technologies

Indexed keywords


EID: 84922372231     PISSN: 10003282     EISSN: None     Source Type: Journal    
DOI: 10.3724/SP.J.1206.2014.00294     Document Type: Review
Times cited : (13)

References (81)
  • 1
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • Consortium E P. An integrated encyclopedia of DNA elements in the human genome. Nature, 2012, 489(7414): 57-74
    • (2012) Nature , vol.489 , Issue.7414 , pp. 57-74
  • 2
    • 84901004299 scopus 로고    scopus 로고
    • The rise of regulatory RNA
    • Morris K V, Mattick J S. The rise of regulatory RNA. Nat Rev Genet, 2014, 15(6): 423-437
    • (2014) Nat Rev Genet , vol.15 , Issue.6 , pp. 423-437
    • Morris, K.V.1    Mattick, J.S.2
  • 3
    • 30044435097 scopus 로고    scopus 로고
    • Organization of the Caenorhabditis elegans small non-coding transcriptome: Genomic features, biogenesis, and expression
    • Deng W, Zhu X P, Skogerbo G, et al. Organization of the Caenorhabditis elegans small non-coding transcriptome: Genomic features, biogenesis, and expression. Genome Research, 2006, 16(1): 20-29
    • (2006) Genome Research , vol.16 , Issue.1 , pp. 20-29
    • Deng, W.1    Zhu, X.P.2    Skogerbo, G.3
  • 4
    • 84857066786 scopus 로고    scopus 로고
    • Modular regulatory principles of large non-coding RNAs
    • Guttman M, Rinn J L. Modular regulatory principles of large non-coding RNAs. Nature, 2012, 482(7385): 339-346
    • (2012) Nature , vol.482 , Issue.7385 , pp. 339-346
    • Guttman, M.1    Rinn, J.L.2
  • 5
    • 84875200257 scopus 로고    scopus 로고
    • Long noncoding RNAs: Cellular address codes in development and disease
    • Batista P J, Chang H Y. Long noncoding RNAs: cellular address codes in development and disease. Cell, 2013, 152(6): 1298-1307
    • (2013) Cell , vol.152 , Issue.6 , pp. 1298-1307
    • Batista, P.J.1    Chang, H.Y.2
  • 6
    • 42549112125 scopus 로고    scopus 로고
    • RNAs as extracellular signaling molecules
    • Dinger M E, Mercer T R, Mattick J S. RNAs as extracellular signaling molecules. J Mol Endocrinol, 2008, 40(4): 151-159
    • (2008) J Mol Endocrinol , vol.40 , Issue.4 , pp. 151-159
    • Dinger, M.E.1    Mercer, T.R.2    Mattick, J.S.3
  • 7
    • 13444267841 scopus 로고    scopus 로고
    • NONCODE: An integrated knowledge database of non-coding RNAs
    • Liu C N, Bai B Y, Skogerbo G, et al. NONCODE: an integrated knowledge database of non-coding RNAs. Nucleic Acids Research, 2005, 33: D112-D115
    • (2005) Nucleic Acids Research , vol.33 , pp. D112-D115
    • Liu, C.N.1    Bai, B.Y.2    Skogerbo, G.3
  • 8
    • 84891798006 scopus 로고    scopus 로고
    • NONCODEv4: Exploring the world of long non-coding RNA genes
    • Xie C, Yuan J, Li H, et al. NONCODEv4: exploring the world of long non-coding RNA genes. Nucleic Acids Res, 2014, 42(Database issue): D98-103
    • (2014) Nucleic Acids Res , vol.42 , Issue.DATABASE ISSUE , pp. D98-D103
    • Xie, C.1    Yuan, J.2    Li, H.3
  • 10
    • 0015443431 scopus 로고
    • The structure and function of chromatin
    • Comings D E. The structure and function of chromatin. Adv Hum Genet, 1972, 3: 237-431
    • (1972) Adv Hum Genet , vol.3 , pp. 237-431
    • Comings, D.E.1
  • 11
    • 0015271630 scopus 로고
    • So much "junk" DNA in our genome
    • Ohno S. So much "junk" DNA in our genome. Brookhaven Symp Biol, 1972, 23: 366-370
    • (1972) Brookhaven Symp Biol , vol.23 , pp. 366-370
    • Ohno, S.1
  • 12
    • 84875590101 scopus 로고    scopus 로고
    • Long noncoding RNAs: Past, present, and future
    • Kung J T, Colognori D, Lee J T. Long noncoding RNAs: past, present, and future. Genetics, 2013, 193(3): 651-669
    • (2013) Genetics , vol.193 , Issue.3 , pp. 651-669
    • Kung, J.T.1    Colognori, D.2    Lee, J.T.3
  • 13
    • 24644519490 scopus 로고    scopus 로고
    • The transcriptional landscape of the mammalian genome
    • Carninci P, Kasukawa T, Katayama S, et al. The transcriptional landscape of the mammalian genome. Science, 2005, 309 (5740): 1559-1563
    • (2005) Science , vol.309 , Issue.5740 , pp. 1559-1563
    • Carninci, P.1    Kasukawa, T.2    Katayama, S.3
  • 14
    • 33846984935 scopus 로고    scopus 로고
    • Transcriptional noise and the fidelity of initiation by RNA polymerase II
    • Struhl K. Transcriptional noise and the fidelity of initiation by RNA polymerase II. Nat Struct Mol Biol, 2007, 14(2): 103-105
    • (2007) Nat Struct Mol Biol , vol.14 , Issue.2 , pp. 103-105
    • Struhl, K.1
  • 15
    • 34248162440 scopus 로고    scopus 로고
    • Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
    • Ponjavic J, Ponting C P, Lunter G. Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs. Genome Res, 2007, 17(5): 556-565
    • (2007) Genome Res , vol.17 , Issue.5 , pp. 556-565
    • Ponjavic, J.1    Ponting, C.P.2    Lunter, G.3
  • 16
    • 84455206362 scopus 로고    scopus 로고
    • Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution
    • Ulitsky I, Shkumatava A, Jan C H, et al. Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution. Cell, 2011, 147(7): 1537-1550
    • (2011) Cell , vol.147 , Issue.7 , pp. 1537-1550
    • Ulitsky, I.1    Shkumatava, A.2    Jan, C.H.3
  • 17
    • 60149099385 scopus 로고    scopus 로고
    • Evolution and Functions of Long Noncoding RNAs
    • Ponting C P, Oliver P L, Reik W. Evolution and Functions of Long Noncoding RNAs. Cell, 2009, 136(4): 629-641
    • (2009) Cell , vol.136 , Issue.4 , pp. 629-641
    • Ponting, C.P.1    Oliver, P.L.2    Reik, W.3
  • 18
    • 84884220048 scopus 로고    scopus 로고
    • Long noncoding RNAs usher in a new era in the biology of enhancers
    • Orom U A, Shiekhattar R. Long noncoding RNAs usher in a new era in the biology of enhancers. Cell, 2013, 154(6): 1190-1193
    • (2013) Cell , vol.154 , Issue.6 , pp. 1190-1193
    • Orom, U.A.1    Shiekhattar, R.2
  • 19
    • 38649114329 scopus 로고    scopus 로고
    • Specific expression of long noncoding RNAs in the mouse brain
    • Mercer T R, Dinger ME, Sunkin S M, et al. Specific expression of long noncoding RNAs in the mouse brain. Proc Natl Acad Sci USA, 2008, 105(2): 716-721
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.2 , pp. 716-721
    • Mercer, T.R.1    Dinger, M.E.2    Sunkin, S.M.3
  • 20
    • 84877575447 scopus 로고    scopus 로고
    • Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo
    • Ramos A D, Diaz A, Nellore A, et al. Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo. Cell Stem Cell, 2013, 12(5): 616-628
    • (2013) Cell Stem Cell , vol.12 , Issue.5 , pp. 616-628
    • Ramos, A.D.1    Diaz, A.2    Nellore, A.3
  • 21
    • 33748675254 scopus 로고    scopus 로고
    • An RNA gene expressed during cortical development evolved rapidly in humans
    • Pollard K S, Salama S R, Lambert N, et al. An RNA gene expressed during cortical development evolved rapidly in humans. Nature, 2006, 443(7108): 167-172
    • (2006) Nature , vol.443 , Issue.7108 , pp. 167-172
    • Pollard, K.S.1    Salama, S.R.2    Lambert, N.3
  • 22
    • 80054973803 scopus 로고    scopus 로고
    • A high-resolution map of human evolutionary constraint using 29 mammals
    • Lindblad-Toh K, Garber M, Zuk O, et al. A high-resolution map of human evolutionary constraint using 29 mammals. Nature, 2011, 478(7370): 476-482
    • (2011) Nature , vol.478 , Issue.7370 , pp. 476-482
    • Lindblad-Toh, K.1    Garber, M.2    Zuk, O.3
  • 23
    • 11144331051 scopus 로고    scopus 로고
    • Accelerated evolution of nervous system genes in the origin of Homo sapiens
    • Dorus S, Vallender E J, Evans P D, et al. Accelerated evolution of nervous system genes in the origin of Homo sapiens. Cell, 2004, 119(7): 1027-1040
    • (2004) Cell , vol.119 , Issue.7 , pp. 1027-1040
    • Dorus, S.1    Vallender, E.J.2    Evans, P.D.3
  • 24
    • 70350118664 scopus 로고    scopus 로고
    • Complex architecture and regulated expression of the Sox2ot locus during vertebrate development
    • Amaral P P, Neyt C, Wilkins S J, et al. Complex architecture and regulated expression of the Sox2ot locus during vertebrate development. RNA, 2009, 15(11): 2013-2027
    • (2009) RNA , vol.15 , Issue.11 , pp. 2013-2027
    • Amaral, P.P.1    Neyt, C.2    Wilkins, S.J.3
  • 25
    • 84879987789 scopus 로고    scopus 로고
    • lincRNAs: Genomics, evolution, and mechanisms
    • Ulitsky I, Bartel D P. lincRNAs: genomics, evolution, and mechanisms. Cell, 2013, 154(1): 26-46
    • (2013) Cell , vol.154 , Issue.1 , pp. 26-46
    • Ulitsky, I.1    Bartel, D.P.2
  • 26
    • 77952367798 scopus 로고    scopus 로고
    • Widespread transcription at neuronal activity-regulated enhancers
    • Kim T K, Hemberg M, Gray J M, et al. Widespread transcription at neuronal activity-regulated enhancers. Nature, 2010, 465 (7295): 182-187
    • (2010) Nature , vol.465 , Issue.7295 , pp. 182-187
    • Kim, T.K.1    Hemberg, M.2    Gray, J.M.3
  • 27
    • 84879694221 scopus 로고    scopus 로고
    • Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription
    • Lam M T, Cho H, Lesch H P, et al. Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. Nature, 2013, 498(7455): 511-515
    • (2013) Nature , vol.498 , Issue.7455 , pp. 511-515
    • Lam, M.T.1    Cho, H.2    Lesch, H.P.3
  • 28
    • 84879695128 scopus 로고    scopus 로고
    • Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
    • Li W, Notani D, Ma Q, et al. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature, 2013, 498(7455): 516-520
    • (2013) Nature , vol.498 , Issue.7455 , pp. 516-520
    • Li, W.1    Notani, D.2    Ma, Q.3
  • 29
    • 84870182699 scopus 로고    scopus 로고
    • Noncoding transcription at enhancers: General principles and functional models
    • Natoli G, Andrau J C. Noncoding transcription at enhancers: general principles and functional models. Annu Rev Genet, 2012, 46: 1-19
    • (2012) Annu Rev Genet , vol.46 , pp. 1-19
    • Natoli, G.1    Andrau, J.C.2
  • 30
    • 79961170994 scopus 로고    scopus 로고
    • A ceRNA hypothesis: The Rosetta Stone of a hidden RNA language?
    • Salmena L, Poliseno L, Tay Y, et al. A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?. Cell, 2011, 146 (3): 353-358
    • (2011) Cell , vol.146 , Issue.3 , pp. 353-358
    • Salmena, L.1    Poliseno, L.2    Tay, Y.3
  • 31
    • 84875372911 scopus 로고    scopus 로고
    • Natural RNA circles function as efficient microRNA sponges
    • Hansen T B, Jensen T I, Clausen B H, et al. Natural RNA circles function as efficient microRNA sponges. Nature, 2013 (doi: 10.1038/nature11993.)
    • (2013) Nature
    • Hansen, T.B.1    Jensen, T.I.2    Clausen, B.H.3
  • 32
    • 84875369248 scopus 로고    scopus 로고
    • Circular RNAs are a large class of animal RNAs with regulatory potency
    • Memczak S, Jens M, Elefsinioti A, et al. Circular RNAs are a large class of animal RNAs with regulatory potency. Nature, 2013(doi: 10.1038/nature11928.)
    • (2013) Nature
    • Memczak, S.1    Jens, M.2    Elefsinioti, A.3
  • 33
    • 84865757142 scopus 로고    scopus 로고
    • Landscape of transcription in human cells
    • Djebali S, Davis C A, Merkel A, et al. Landscape of transcription in human cells. Nature, 2012, 489(7414): 101-108
    • (2012) Nature , vol.489 , Issue.7414 , pp. 101-108
    • Djebali, S.1    Davis, C.A.2    Merkel, A.3
  • 34
    • 84890860436 scopus 로고    scopus 로고
    • Long noncoding RNAs: Fresh perspectives into the RNA world
    • Yang L, Froberg J E, Lee J T. Long noncoding RNAs: fresh perspectives into the RNA world. Trends Biochem Sci, 2014, 39(1): 35-43
    • (2014) Trends Biochem Sci , vol.39 , Issue.1 , pp. 35-43
    • Yang, L.1    Froberg, J.E.2    Lee, J.T.3
  • 35
    • 84860362829 scopus 로고    scopus 로고
    • Active chromatin and noncoding RNAs: An intimate relationship
    • Flynn R A, Chang H Y. Active chromatin and noncoding RNAs: an intimate relationship. Curr Opin Genet Dev, 2012, 22(2): 172-178
    • (2012) Curr Opin Genet Dev , vol.22 , Issue.2 , pp. 172-178
    • Flynn, R.A.1    Chang, H.Y.2
  • 36
    • 84886860884 scopus 로고    scopus 로고
    • Identification and function of long non-coding RNA
    • Ernst C, Morton C C. Identification and function of long non-coding RNA. Front Cell Neurosci, 2013, 7: 168
    • (2013) Front Cell Neurosci , vol.7 , pp. 168
    • Ernst, C.1    Morton, C.C.2
  • 37
    • 55349109963 scopus 로고    scopus 로고
    • Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome
    • Zhao J, Sun B K, Erwin J A, et al. Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome. Science, 2008, 322(5902): 750-756
    • (2008) Science , vol.322 , Issue.5902 , pp. 750-756
    • Zhao, J.1    Sun, B.K.2    Erwin, J.A.3
  • 38
    • 17744388101 scopus 로고    scopus 로고
    • Characterization of the genomic Xist locus in rodents reveals conservation of overall gene structure and tandem repeats but rapid evolution of unique sequence
    • Nesterova T B, Slobodyanyuk S Y, Elisaphenko E A, et al. Characterization of the genomic Xist locus in rodents reveals conservation of overall gene structure and tandem repeats but rapid evolution of unique sequence. Genome Res, 2001, 11(5): 833-849
    • (2001) Genome Res , vol.11 , Issue.5 , pp. 833-849
    • Nesterova, T.B.1    Slobodyanyuk, S.Y.2    Elisaphenko, E.A.3
  • 39
    • 80053045739 scopus 로고    scopus 로고
    • Molecular mechanisms of long noncoding RNAs
    • Wang K C, Chang H Y. Molecular mechanisms of long noncoding RNAs. Mol Cell, 2011, 43(6): 904-914
    • (2011) Mol Cell , vol.43 , Issue.6 , pp. 904-914
    • Wang, K.C.1    Chang, H.Y.2
  • 40
    • 79959756263 scopus 로고    scopus 로고
    • Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters
    • Hung T, Wang Y, Lin M F, et al. Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters. Nat Genet, 2011, 43(7): 621-629
    • (2011) Nat Genet , vol.43 , Issue.7 , pp. 621-629
    • Hung, T.1    Wang, Y.2    Lin, M.F.3
  • 41
    • 77954572735 scopus 로고    scopus 로고
    • Long noncoding RNA as modular scaffold of histone modification complexes
    • Tsai M C, Manor O, Wan Y, et al. Long noncoding RNA as modular scaffold of histone modification complexes. Science, 2010, 329(5992): 689-693
    • (2010) Science , vol.329 , Issue.5992 , pp. 689-693
    • Tsai, M.C.1    Manor, O.2    Wan, Y.3
  • 42
    • 84875183056 scopus 로고    scopus 로고
    • Structure and function of long noncoding RNAs in epigenetic regulation
    • Mercer T R, Mattick J S. Structure and function of long noncoding RNAs in epigenetic regulation. Nat Struct Mol Biol, 2013, 20(3): 300-307
    • (2013) Nat Struct Mol Biol , vol.20 , Issue.3 , pp. 300-307
    • Mercer, T.R.1    Mattick, J.S.2
  • 43
    • 84865379361 scopus 로고    scopus 로고
    • LincRNA-p21 suppresses target mRNA translation
    • Yoon J H, Abdelmohsen K, Srikantan S, et al. LincRNA-p21 suppresses target mRNA translation. Mol Cell, 2012, 47 (4): 648-655
    • (2012) Mol Cell , vol.47 , Issue.4 , pp. 648-655
    • Yoon, J.H.1    Abdelmohsen, K.2    Srikantan, S.3
  • 44
    • 77952698932 scopus 로고    scopus 로고
    • Evidence for natural antisense transcript-mediated inhibition of microRNA function
    • Faghihi M A, Zhang M, Huang J, et al. Evidence for natural antisense transcript-mediated inhibition of microRNA function. Genome Biol, 2010, 11(5): R56
    • (2010) Genome Biol , vol.11 , Issue.5 , pp. R56
    • Faghihi, M.A.1    Zhang, M.2    Huang, J.3
  • 45
    • 84863219731 scopus 로고    scopus 로고
    • The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r
    • Keniry A, Oxley D, Monnier P, et al. The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r. Nat Cell Biol, 2012, 14(7): 659-665
    • (2012) Nat Cell Biol , vol.14 , Issue.7 , pp. 659-665
    • Keniry, A.1    Oxley, D.2    Monnier, P.3
  • 46
    • 84914100191 scopus 로고    scopus 로고
    • Functional interactions among microRNAs and long noncoding RNAs
    • Yoon J H, Abdelmohsen K, Gorospe M. Functional interactions among microRNAs and long noncoding RNAs. Semin Cell Dev Biol, 2014, 34C: 9-14
    • (2014) Semin Cell Dev Biol , vol.34 C , pp. 9-14
    • Yoon, J.H.1    Abdelmohsen, K.2    Gorospe, M.3
  • 47
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn J L, Chang HY. Genome regulation by long noncoding RNAs. Annu Rev Biochem, 2012, 81: 145-166
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 48
    • 84860324470 scopus 로고    scopus 로고
    • Roles for microRNAs in conferring robustness to biological processes
    • Ebert M S, Sharp P A. Roles for microRNAs in conferring robustness to biological processes. Cell, 2012, 149(3): 515-524
    • (2012) Cell , vol.149 , Issue.3 , pp. 515-524
    • Ebert, M.S.1    Sharp, P.A.2
  • 49
    • 80054715378 scopus 로고    scopus 로고
    • A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
    • Cesana M, Cacchiarelli D, Legnini I, et al. A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA. Cell, 2011, 147(2): 358-369
    • (2011) Cell , vol.147 , Issue.2 , pp. 358-369
    • Cesana, M.1    Cacchiarelli, D.2    Legnini, I.3
  • 50
    • 84876367541 scopus 로고    scopus 로고
    • Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stemcell self-renewal
    • Wang Y, Xu Z, Jiang J, et al. Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stemcell self-renewal. Developmental Cell, 2013, 25(1): 69-80
    • (2013) Developmental Cell , vol.25 , Issue.1 , pp. 69-80
    • Wang, Y.1    Xu, Z.2    Jiang, J.3
  • 51
    • 84902141800 scopus 로고    scopus 로고
    • Long noncoding RNAs in cell-fate programming and reprogramming
    • Flynn R A, Chang H Y. Long noncoding RNAs in cell-fate programming and reprogramming. Cell Stem Cell, 2014, 14 (6): 752-761
    • (2014) Cell Stem Cell , vol.14 , Issue.6 , pp. 752-761
    • Flynn, R.A.1    Chang, H.Y.2
  • 52
    • 84856492490 scopus 로고    scopus 로고
    • Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors
    • Ng S Y, Johnson R, Stanton L W. Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors. EMBO J, 2012, 31(3): 522-533
    • (2012) EMBO J , vol.31 , Issue.3 , pp. 522-533
    • Ng, S.Y.1    Johnson, R.2    Stanton, L.W.3
  • 53
    • 84873300214 scopus 로고    scopus 로고
    • Braveheart, a long noncoding RNA required for cardiovascular lineage commitment
    • KlattenhoffC A, Scheuermann J C, Surface L E, et al. Braveheart, a long noncoding RNA required for cardiovascular lineage commitment. Cell, 2013, 152(3): 570-583
    • (2013) Cell , vol.152 , Issue.3 , pp. 570-583
    • Klattenhoff, C.A.1    Scheuermann, J.C.2    Surface, L.E.3
  • 54
    • 84873829893 scopus 로고    scopus 로고
    • The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse
    • Grote P, Wittler L, Hendrix D, et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Developmental Cell, 2013, 24(2): 206-214
    • (2013) Developmental Cell , vol.24 , Issue.2 , pp. 206-214
    • Grote, P.1    Wittler, L.2    Hendrix, D.3
  • 55
    • 84880520919 scopus 로고    scopus 로고
    • Biogenesis and function of non-coding RNAs in muscle differentiation and in Duchenne muscular dystrophy
    • Twayana S, Legnini I, Cesana M, et al. Biogenesis and function of non-coding RNAs in muscle differentiation and in Duchenne muscular dystrophy. Biochem Soc Trans, 2013, 41(4): 844-849
    • (2013) Biochem Soc Trans , vol.41 , Issue.4 , pp. 844-849
    • Twayana, S.1    Legnini, I.2    Cesana, M.3
  • 56
    • 84863116597 scopus 로고    scopus 로고
    • Suppression of progenitor differentiation requires the long noncoding RNA ANCR
    • Kretz M, Webster D E, Flockhart R J, et al. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. Genes Dev, 2012, 26(4): 338-343
    • (2012) Genes Dev , vol.26 , Issue.4 , pp. 338-343
    • Kretz, M.1    Webster, D.E.2    Flockhart, R.J.3
  • 57
    • 84872135457 scopus 로고    scopus 로고
    • Control of somatic tissue differentiation by the long non-coding RNA TINCR
    • Kretz M, Siprashvili Z, Chu C, et al. Control of somatic tissue differentiation by the long non-coding RNA TINCR. Nature, 2013, 493(7431): 231-235
    • (2013) Nature , vol.493 , Issue.7431 , pp. 231-235
    • Kretz, M.1    Siprashvili, Z.2    Chu, C.3
  • 58
    • 84255160602 scopus 로고    scopus 로고
    • Long noncoding RNA-mediated anti-apoptotic activity in murine erythroid terminal differentiation
    • Hu W, Yuan B, Flygare J, et al. Long noncoding RNA-mediated anti-apoptotic activity in murine erythroid terminal differentiation. Genes Dev, 2011, 25(24): 2573-2578
    • (2011) Genes Dev , vol.25 , Issue.24 , pp. 2573-2578
    • Hu, W.1    Yuan, B.2    Flygare, J.3
  • 59
    • 84874500772 scopus 로고    scopus 로고
    • Long noncoding RNAs regulate adipogenesis
    • Sun L, Goff L A, Trapnell C, et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci USA, 2013, 110(9): 3387-3392
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.9 , pp. 3387-3392
    • Sun, L.1    Goff, L.A.2    Trapnell, C.3
  • 60
    • 67649222358 scopus 로고    scopus 로고
    • Induced pluripotent stemcells and embryonic stem cells are distinguished by gene expression signatures
    • Chin MH, Mason MJ, Xie W, et al. Induced pluripotent stemcells and embryonic stem cells are distinguished by gene expression signatures. Cell Stem Cell, 2009, 5(1): 111-123
    • (2009) Cell Stem Cell , vol.5 , Issue.1 , pp. 111-123
    • Chin, M.H.1    Mason, M.J.2    Xie, W.3
  • 61
    • 64349091471 scopus 로고    scopus 로고
    • Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells
    • Ball MP, Li J B, Gao Y, et al. Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells. Nat Biotechnol, 2009, 27(4): 361-368
    • (2009) Nat Biotechnol , vol.27 , Issue.4 , pp. 361-368
    • Ball, M.P.1    Li, J.B.2    Gao, Y.3
  • 62
    • 70649095120 scopus 로고    scopus 로고
    • Differential methylation of tissueand cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts
    • Doi A, Park I H, Wen B, et al. Differential methylation of tissueand cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts. Nat Genet, 2009, 41(12): 1350-1353
    • (2009) Nat Genet , vol.41 , Issue.12 , pp. 1350-1353
    • Doi, A.1    Park, I.H.2    Wen, B.3
  • 63
    • 50649118350 scopus 로고    scopus 로고
    • Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
    • Dinger M E, Amaral P P, Mercer T R, et al. Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Res, 2008, 18(9): 1433-1445
    • (2008) Genome Res , vol.18 , Issue.9 , pp. 1433-1445
    • Dinger, M.E.1    Amaral, P.P.2    Mercer, T.R.3
  • 64
    • 80052869283 scopus 로고    scopus 로고
    • lincRNAs act in the circuitry controlling pluripotency and differentiation
    • Guttman M, Donaghey J, Carey B W, et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature, 2011, 477(7364): 295-300
    • (2011) Nature , vol.477 , Issue.7364 , pp. 295-300
    • Guttman, M.1    Donaghey, J.2    Carey, B.W.3
  • 65
    • 78649467088 scopus 로고    scopus 로고
    • Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
    • Loewer S, Cabili M N, Guttman M, et al. Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells. Nat Genet, 2010, 42(12): 1113-1117
    • (2010) Nat Genet , vol.42 , Issue.12 , pp. 1113-1117
    • Loewer, S.1    Cabili, M.N.2    Guttman, M.3
  • 66
    • 77956927823 scopus 로고    scopus 로고
    • The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation
    • Tripathi V, Ellis J D, Shen Z, et al. The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol Cell, 2010, 39(6): 925-938
    • (2010) Mol Cell , vol.39 , Issue.6 , pp. 925-938
    • Tripathi, V.1    Ellis, J.D.2    Shen, Z.3
  • 67
    • 84906791043 scopus 로고    scopus 로고
    • Long Noncoding RNA TARID Directs Demethylation and Activation of the Tumor Suppressor TCF21 via GADD45A
    • Arab K, Park Y J, Lindroth A M, et al. Long Noncoding RNA TARID Directs Demethylation and Activation of the Tumor Suppressor TCF21 via GADD45A. Mol Cell, 2014, 55(4): 604-614
    • (2014) Mol Cell , vol.55 , Issue.4 , pp. 604-614
    • Arab, K.1    Park, Y.J.2    Lindroth, A.M.3
  • 68
    • 84888057006 scopus 로고    scopus 로고
    • DNMT1-interacting RNAs block gene-specific DNA methylation
    • Di Ruscio A, Ebralidze A K, Benoukraf T, et al. DNMT1- interacting RNAs block gene-specific DNA methylation. Nature, 2013, 503(7476): 371-376
    • (2013) Nature , vol.503 , Issue.7476 , pp. 371-376
    • Di Ruscio, A.1    Ebralidze, A.K.2    Benoukraf, T.3
  • 69
    • 24644472515 scopus 로고    scopus 로고
    • Antisense transcription in the mammalian transcriptome
    • Katayama S, Tomaru Y, Kasukawa T, et al. Antisense transcription in the mammalian transcriptome. Science, 2005, 309(5740): 1564-1566
    • (2005) Science , vol.309 , Issue.5740 , pp. 1564-1566
    • Katayama, S.1    Tomaru, Y.2    Kasukawa, T.3
  • 70
    • 77956661154 scopus 로고    scopus 로고
    • LINCing chromatin remodeling to metastasis
    • Croce C M. LINCing chromatin remodeling to metastasis. Nat Biotechnol, 2010, 28(9): 931-932
    • (2010) Nat Biotechnol , vol.28 , Issue.9 , pp. 931-932
    • Croce, C.M.1
  • 71
    • 84904735424 scopus 로고    scopus 로고
    • Transcriptional regulatory functions of nuclear long noncoding RNAs
    • Vance K W, Ponting C P. Transcriptional regulatory functions of nuclear long noncoding RNAs. Trends Genet, 2014, 30 (8): 348-355
    • (2014) Trends Genet , vol.30 , Issue.8 , pp. 348-355
    • Vance, K.W.1    Ponting, C.P.2
  • 72
    • 84905102556 scopus 로고    scopus 로고
    • Long noncoding RNAs and prostate carcinogenesis: The missing 'linc'?
    • Walsh A L, Tuzova A V, Bolton E M, et al. Long noncoding RNAs and prostate carcinogenesis: the missing 'linc'?. Trends Mol Med, 2014, 20(8): 428-436
    • (2014) Trends Mol Med , vol.20 , Issue.8 , pp. 428-436
    • Walsh, A.L.1    Tuzova, A.V.2    Bolton, E.M.3
  • 73
    • 80051716957 scopus 로고    scopus 로고
    • Long-range chromatin interactions at the mouse Igf2/H19 locus reveal a novel paternally expressed long non-coding RNA
    • Court F, Baniol M, Hagege H, et al. Long-range chromatin interactions at the mouse Igf2/H19 locus reveal a novel paternally expressed long non-coding RNA. Nucleic Acids Res, 2011, 39(14): 5893-5906
    • (2011) Nucleic Acids Res , vol.39 , Issue.14 , pp. 5893-5906
    • Court, F.1    Baniol, M.2    Hagege, H.3
  • 74
    • 33846223294 scopus 로고    scopus 로고
    • Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA
    • Panzitt K, Tschernatsch M M, Guelly C, et al. Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA. Gastroenterology, 2007, 132(1): 330-342
    • (2007) Gastroenterology , vol.132 , Issue.1 , pp. 330-342
    • Panzitt, K.1    Tschernatsch, M.M.2    Guelly, C.3
  • 75
    • 77956542998 scopus 로고    scopus 로고
    • CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer
    • Wang J, Liu X, Wu H, et al. CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer. Nucleic Acids Res, 2010, 38(16): 5366-5383
    • (2010) Nucleic Acids Res , vol.38 , Issue.16 , pp. 5366-5383
    • Wang, J.1    Liu, X.2    Wu, H.3
  • 76
    • 84904755192 scopus 로고    scopus 로고
    • Long noncoding RNA in liver diseases
    • Takahashi K, Yan I, Haga H, et al. Long noncoding RNA in liver diseases. Hepatology, 2014, 60(2): 744-753
    • (2014) Hepatology , vol.60 , Issue.2 , pp. 744-753
    • Takahashi, K.1    Yan, I.2    Haga, H.3
  • 77
    • 0344429906 scopus 로고    scopus 로고
    • MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer
    • Ji P, Diederichs S, Wang W, et al. MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer. Oncogene, 2003, 22(39): 8031-8041
    • (2003) Oncogene , vol.22 , Issue.39 , pp. 8031-8041
    • Ji, P.1    Diederichs, S.2    Wang, W.3
  • 78
    • 79955996135 scopus 로고    scopus 로고
    • MALAT-1: A long non-coding RNA and its important 3' end functional motif in colorectal cancer metastasis
    • Xu C, Yang M, Tian J, et al. MALAT-1: a long non-coding RNA and its important 3' end functional motif in colorectal cancer metastasis. Int J Oncol, 2011, 39(1): 169-175
    • (2011) Int J Oncol , vol.39 , Issue.1 , pp. 169-175
    • Xu, C.1    Yang, M.2    Tian, J.3
  • 79
    • 77956896027 scopus 로고    scopus 로고
    • LNCaP Atlas: Gene expression associated with in vivo progression to castrationrecurrent prostate cancer
    • Romanuik T L, Wang G, Morozova O, et al. LNCaP Atlas: gene expression associated with in vivo progression to castrationrecurrent prostate cancer. BMC Med Genomics, 2010, 3: 43
    • (2010) BMC Med Genomics , vol.3 , pp. 43
    • Romanuik, T.L.1    Wang, G.2    Morozova, O.3
  • 80
    • 84893701149 scopus 로고    scopus 로고
    • LncRNA profile study reveals a three-lncRNA signature associated with the survival of patients with oesophageal squamous cell carcinoma
    • Li J, Chen Z, Tian L, et al. LncRNA profile study reveals a three-lncRNA signature associated with the survival of patients with oesophageal squamous cell carcinoma. Gut, 2014
    • (2014) Gut
    • Li, J.1    Chen, Z.2    Tian, L.3
  • 81
    • 80054756754 scopus 로고    scopus 로고
    • Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions
    • Chu C, Qu K, Zhong F L, et al. Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions. Mol Cell, 2011, 44(4): 667-678
    • (2011) Mol Cell , vol.44 , Issue.4 , pp. 667-678
    • Chu, C.1    Qu, K.2    Zhong, F.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.