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Air pollution toxicology–a brief review of the role of the science in shaping the current understanding of air pollution health risks
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Stanek LW, Brown JS, Stanek J, Gift J, Costa DL. Air pollution toxicology–a brief review of the role of the science in shaping the current understanding of air pollution health risks. Toxicol Sci. 2011;120 Suppl 1:S8–S27.
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Interactive effects of antioxidant genes and air pollution on respiratory function and airway disease: a HuGE review
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Minelli C, Wei I, Sagoo G, Jarvis D, Shaheen S, Burney P. Interactive effects of antioxidant genes and air pollution on respiratory function and airway disease: a HuGE review. Am J Epidemiol. 2011;173:603–20.
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7
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Epigenetics and miRNA emerge as key regulators of smooth muscle cell phenotype and function
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Clifford RL, Singer CA, John AE. Epigenetics and miRNA emerge as key regulators of smooth muscle cell phenotype and function. Pulm Pharmacol Ther. 2013;26:75–85.
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Clifford, R.L.1
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Epigenetics in inflammatory bowel disease
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Jenke AC, Zilbauer M. Epigenetics in inflammatory bowel disease. Curr Opin Gastroenterol. 2012;28:577–84.
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Jenke, A.C.1
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Genetics and epigenetics of Alzheimer's disease
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Alagiakrishnan K, Gill SS, Fagarasanu A. Genetics and epigenetics of Alzheimer's disease. Postgrad Med J. 2012;88:522–9.
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Alagiakrishnan, K.1
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Epigenetics and childhood asthma: current evidence and future research directions
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Salam MT, Zhang Y, Begum K. Epigenetics and childhood asthma: current evidence and future research directions. Epigenomics. 2012;4:415–29.
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Targeting histone modifications–epigenetics in cancer
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Waldmann T, Schneider R. Targeting histone modifications–epigenetics in cancer. Curr Opin Cell Biol. 2013;25:184–9.
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Waldmann, T.1
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Dawson MA, Kouzarides T. Cancer epigenetics: from mechanism to therapy. Cell. 2012;150:12–27.
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Dawson, M.A.1
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Basic concepts of epigenetics
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COI: 1:CAS:528:DC%2BC3sXhvFShurk%3D, PID: 23357459
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Inbar-Feigenberg M, Choufani S, Butcher DT, Roifman M, Weksberg R. Basic concepts of epigenetics. Fertil Steril. 2013;99:607–15.
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14
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Environmental epigenetics
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Bollati V, Baccarelli A. Environmental epigenetics. Heredity (Edinb). 2010;105:105–12.
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Edwards TM, Myers JP. Environmental exposures and gene regulation in disease etiology. Environ Health Perspect. 2007;115:1264–70.
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microRNAs: implications for air pollution research
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Jardim MJ. microRNAs: implications for air pollution research. Mutat Res. 2011;717:38–45.
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Prenatal exposure to polycyclic aromatic hydrocarbons, benzo[a]pyrene-DNA adducts, and genomic DNA methylation in cord blood
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Herbstman JB, Tang D, Zhu D, et al. Prenatal exposure to polycyclic aromatic hydrocarbons, benzo[a]pyrene-DNA adducts, and genomic DNA methylation in cord blood. Environ Health Perspect. 2012;120:733–8.
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Herbstman, J.B.1
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19
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Dnmt3a-CD is less susceptible to bulky benzo[a]pyrene diol epoxide-derived DNA lesions than prokaryotic DNA methyltransferases
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COI: 1:CAS:528:DC%2BC3MXksFCgtQ%3D%3D, PID: 21174446
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Lukashevich OV, Baskunov VB, Darii MV, Kolbanovskiy A, Baykov AA, Gromova ES. Dnmt3a-CD is less susceptible to bulky benzo[a]pyrene diol epoxide-derived DNA lesions than prokaryotic DNA methyltransferases. Biochemistry. 2011;50:875–81.
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Lukashevich, O.V.1
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Kolbanovskiy, A.4
Baykov, A.A.5
Gromova, E.S.6
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20
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84862844613
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Review on proteomic analyses of benzo[a]pyrene toxicity
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COI: 1:CAS:528:DC%2BC38XptFCnu7c%3D, PID: 22623321
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Verma N, Pink M, Rettenmeier AW, Schmitz-Spanke S. Review on proteomic analyses of benzo[a]pyrene toxicity. Proteomics. 2012;12:1731–55.
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Proteomics
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21
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84885956914
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Global and MGMT promoter hypomethylation independently associated with genomic instability of lymphocytes in subjects exposed to high-dose polycyclic aromatic hydrocarbon
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COI: 1:CAS:528:DC%2BC3sXkvF2mtbo%3D, PID: 23543013
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Duan H, He Z, Ma J, et al. Global and MGMT promoter hypomethylation independently associated with genomic instability of lymphocytes in subjects exposed to high-dose polycyclic aromatic hydrocarbon. Arch Toxicol. 2013;87(11):2013–22.
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Ma, J.3
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22
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77649221586
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Shorter telomere length in peripheral blood lymphocytes of workers exposed to polycyclic aromatic hydrocarbons
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COI: 1:CAS:528:DC%2BC3cXhsVWju7g%3D, PID: 19892797
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Pavanello S, Pesatori AC, Dioni L, et al. Shorter telomere length in peripheral blood lymphocytes of workers exposed to polycyclic aromatic hydrocarbons. Carcinogenesis. 2010;31:216–21.
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23
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84864423021
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Air pollution and DNA methylation: interaction by psychological factors in the VA Normative Aging Study
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PID: 22798479
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Madrigano J, Baccarelli A, Mittleman MA, et al. Air pollution and DNA methylation: interaction by psychological factors in the VA Normative Aging Study. Am J Epidemiol. 2012;176:224–32.
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Am J Epidemiol
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Madrigano, J.1
Baccarelli, A.2
Mittleman, M.A.3
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24
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79952402071
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Reactivation of L1 retrotransposon by benzo(a)pyrene involves complex genetic and epigenetic regulation
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COI: 1:CAS:528:DC%2BC3MXmtVKntr8%3D, PID: 21150308
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Teneng I, Montoya-Durango DE, Quertermous JL, Lacy ME, Ramos KS. Reactivation of L1 retrotransposon by benzo(a)pyrene involves complex genetic and epigenetic regulation. Epigenetics. 2011;6:355–67.
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Teneng, I.1
Montoya-Durango, D.E.2
Quertermous, J.L.3
Lacy, M.E.4
Ramos, K.S.5
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25
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77953756694
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Air pollution, obesity, genes and cellular adhesion molecules
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COI: 1:CAS:528:DC%2BC3cXnsVyjsbs%3D, PID: 19884647
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Madrigano J, Baccarelli A, Wright RO, et al. Air pollution, obesity, genes and cellular adhesion molecules. Occup Environ Med. 2010;67:312–7.
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Occup Environ Med
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Madrigano, J.1
Baccarelli, A.2
Wright, R.O.3
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26
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79960133058
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Prolonged exposure to particulate pollution, genes associated with glutathione pathways, and DNA methylation in a cohort of older men
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COI: 1:CAS:528:DC%2BC3MXhtVaksbrM, PID: 21385671
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Madrigano J, Baccarelli A, Mittleman MA, et al. Prolonged exposure to particulate pollution, genes associated with glutathione pathways, and DNA methylation in a cohort of older men. Environ Health Perspect. 2011;119:977–82.
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Madrigano, J.1
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Mittleman, M.A.3
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27
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84872152008
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DNA methylation differences in exposed workers and nearby residents of the Ma Ta Phut industrial estate, Rayong, Thailand
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PID: 23064502, discussion 61-3
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Peluso M, Bollati V, Munnia A, et al. DNA methylation differences in exposed workers and nearby residents of the Ma Ta Phut industrial estate, Rayong, Thailand. Int J Epidemiol. 2012;41:1753–60. discussion 61-3.
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84885859371
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DNA hypomethylation, ambient particulate matter, and increased blood pressure: findings from controlled human exposure experiments
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PID: 23782920
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Bellavia A, Urch B, Speck M, et al. DNA hypomethylation, ambient particulate matter, and increased blood pressure: findings from controlled human exposure experiments. J Am Heart Assoc. 2013;2:e000212.
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84857055272
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Air pollution and markers of coagulation, inflammation, and endothelial function: associations and epigene-environment interactions in an elderly cohort
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PID: 22237295
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Bind MA, Baccarelli A, Zanobetti A, et al. Air pollution and markers of coagulation, inflammation, and endothelial function: associations and epigene-environment interactions in an elderly cohort. Epidemiology. 2012;23:332–40.
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Epidemiology
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Bind, M.A.1
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30
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84863837640
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Hypomethylation of dual specificity phosphatase 22 promoter correlates with duration of service in firefighters and is inducible by low-dose benzo[a]pyrene
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COI: 1:CAS:528:DC%2BC38XhtVeqt73F, PID: 22796920
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Ouyang B, Baxter CS, Lam HM, et al. Hypomethylation of dual specificity phosphatase 22 promoter correlates with duration of service in firefighters and is inducible by low-dose benzo[a]pyrene. J Occup Environ Med. 2012;54:774–80.
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31
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Expression of glutathione S-transferase M2 in stage I/II non-small cell lung cancer and alleviation of DNA damage exposure to benzo[a]pyrene
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COI: 1:CAS:528:DC%2BC3cXhs1ylt7g%3D, PID: 19900515
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Tang SC, Sheu GT, Wong RH, et al. Expression of glutathione S-transferase M2 in stage I/II non-small cell lung cancer and alleviation of DNA damage exposure to benzo[a]pyrene. Toxicol Lett. 2010;192:316–23.
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Tang, S.C.1
Sheu, G.T.2
Wong, R.H.3
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32
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84875829863
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Factors affecting the 27K DNA methylation pattern in asthmatic and healthy children from locations with various environments
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PID: 23458556
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Rossnerova A, Tulupova E, Tabashidze N, et al. Factors affecting the 27K DNA methylation pattern in asthmatic and healthy children from locations with various environments. Mutat Res. 2013;741–742:18–26.
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Rossnerova, A.1
Tulupova, E.2
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33
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77951566128
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Benzo[a]pyrene diol epoxide suppresses retinoic acid receptor-beta2 expression by recruiting DNA (cytosine-5-)-methyltransferase 3A
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PID: 20426865
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Ye F, Xu XC. Benzo[a]pyrene diol epoxide suppresses retinoic acid receptor-beta2 expression by recruiting DNA (cytosine-5-)-methyltransferase 3A. Mol Cancer. 2010;9:93.
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Mol Cancer
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Ye, F.1
Xu, X.C.2
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84878628242
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Placental DNA hypomethylation in association with particulate air pollution in early life
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COI: 1:CAS:528:DC%2BC3sXhtVOhtrvP, PID: 23742113
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Janssen BG, Godderis L, Pieters N, et al. Placental DNA hypomethylation in association with particulate air pollution in early life. Part Fibre Toxicol. 2013;10:22.
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Part Fibre Toxicol
, vol.10
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Janssen, B.G.1
Godderis, L.2
Pieters, N.3
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35
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84881504081
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Global and gene specific DNA methylation changes during zebrafish development
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COI: 1:CAS:528:DC%2BC3sXhtlGrtbbM, PID: 23876386
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Fang X, Corrales J, Thornton C, Scheffler BE, Willett KL. Global and gene specific DNA methylation changes during zebrafish development. Comp Biochem Physiol B Biochem Mol Biol. 2013;166:99–108.
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Comp Biochem Physiol B Biochem Mol Biol
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Fang, X.1
Corrales, J.2
Thornton, C.3
Scheffler, B.E.4
Willett, K.L.5
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36
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84877864499
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Benzo[a]pyrene decreases global and gene specific DNA methylation during zebrafish development
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COI: 1:CAS:528:DC%2BC3sXnsFWhs70%3D, PID: 23542452
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Fang X, Thornton C, Scheffler BE, Willett KL. Benzo[a]pyrene decreases global and gene specific DNA methylation during zebrafish development. Environ Toxicol Pharmacol. 2013;36:40–50.
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Environ Toxicol Pharmacol
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Fang, X.1
Thornton, C.2
Scheffler, B.E.3
Willett, K.L.4
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37
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84879993613
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A panel study of occupational exposure to fine particulate matter and changes in DNA methylation over a single workday and years worked in boilermaker welders
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COI: 1:CAS:528:DC%2BC3sXht1ygu7fF, PID: 23758843
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Kile ML, Fang S, Baccarelli AA, Tarantini L, Cavallari J, Christiani DC. A panel study of occupational exposure to fine particulate matter and changes in DNA methylation over a single workday and years worked in boilermaker welders. Environ Health. 2013;12:47.
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Environ Health
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Kile, M.L.1
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Cavallari, J.5
Christiani, D.C.6
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38
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84865679756
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Particulate matter, DNA methylation in nitric oxide synthase, and childhood respiratory disease
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COI: 1:CAS:528:DC%2BC38XhsFeru7zJ, PID: 22591701
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Breton CV, Salam MT, Wang X, Byun HM, Siegmund KD, Gilliland FD. Particulate matter, DNA methylation in nitric oxide synthase, and childhood respiratory disease. Environ Health Perspect. 2012;120:1320–6.
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Environ Health Perspect
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Breton, C.V.1
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Wang, X.3
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Siegmund, K.D.5
Gilliland, F.D.6
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39
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84455208250
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Genetic and epigenetic variations in inducible nitric oxide synthase promoter, particulate pollution, and exhaled nitric oxide levels in children
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This paper was the first to illustrate complex interactions between PM 2.5, genetic variation in iNOS and iNOS methylation on the gene product
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2.5, genetic variation in iNOS and iNOS methylation on the gene product.
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J Allergy Clin Immunol
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Salam, M.T.1
Byun, H.M.2
Lurmann, F.3
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40
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60749124259
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Effects of particulate matter on genomic DNA methylation content and iNOS promoter methylation
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COI: 1:CAS:528:DC%2BD1MXivFSktrY%3D, PID: 19270791
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Tarantini L, Bonzini M, Apostoli P, et al. Effects of particulate matter on genomic DNA methylation content and iNOS promoter methylation. Environ Health Perspect. 2009;117:217–22.
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Tarantini, L.1
Bonzini, M.2
Apostoli, P.3
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41
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84876099049
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Exposure to airborne particulate matter is associated with methylation pattern in the asthma pathway
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COI: 1:CAS:528:DC%2BC3sXlsV2rtb0%3D, PID: 23566092, This paper applied an interesting pathway approach to identify disease pathways particularly affected by air pollutant exposures
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Sofer T, Baccarelli A, Cantone L, et al. Exposure to airborne particulate matter is associated with methylation pattern in the asthma pathway. Epigenomics. 2013;5:147–54. This paper applied an interesting pathway approach to identify disease pathways particularly affected by air pollutant exposures.
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(2013)
Epigenomics
, vol.5
, pp. 147-154
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Sofer, T.1
Baccarelli, A.2
Cantone, L.3
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42
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77957757418
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Ambient air pollution impairs regulatory T-cell function in asthma
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Nadeau K, McDonald-Hyman C, Noth EM, et al. Ambient air pollution impairs regulatory T-cell function in asthma. J Allergy Clin Immunol. 2010;126:845–52 e810. This paper focused on addressing effects of pollution on a candidate gene in a very specific cell type motivated by a clear hypothesis, and has found consistently interesting results.
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J Allergy Clin Immunol
, vol.126
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Nadeau, K.1
McDonald-Hyman, C.2
Noth, E.M.3
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43
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84878437974
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Secondhand smoke in combination with ambient air pollution exposure is associated with increasedx CpG methylation and decreased expression of IFN-gamma in T effector cells and Foxp3 in T regulatory cells in children
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COI: 1:CAS:528:DC%2BC3sXitlKjsLY%3D, PID: 23009259
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Kohli A, Garcia MA, Miller RL, et al. Secondhand smoke in combination with ambient air pollution exposure is associated with increasedx CpG methylation and decreased expression of IFN-gamma in T effector cells and Foxp3 in T regulatory cells in children. Clin Epigenetics. 2012;4:17.
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Clin Epigenetics
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Kohli, A.1
Garcia, M.A.2
Miller, R.L.3
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44
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84859771300
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Particulate matter air pollution induces hypermethylation of the p16 promoter via a mitochondrial ROS-JNK-DNMT1 pathway
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PID: 22355787
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Soberanes S, Gonzalez A, Urich D, et al. Particulate matter air pollution induces hypermethylation of the p16 promoter via a mitochondrial ROS-JNK-DNMT1 pathway. Sci Rep. 2012;2:275.
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Sci Rep
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Soberanes, S.1
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45
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79955843705
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Effects of short-term exposure to inhalable particulate matter on telomere length, telomerase expression, and telomerase methylation in steel workers
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COI: 1:CAS:528:DC%2BC3MXnsFygu7o%3D, PID: 21169126
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Dioni L, Hoxha M, Nordio F, et al. Effects of short-term exposure to inhalable particulate matter on telomere length, telomerase expression, and telomerase methylation in steel workers. Environ Health Perspect. 2011;119:622–7.
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