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Volumn 6, Issue , 2016, Pages

Combining multiple hypothesis testing with machine learning increases the statistical power of genome-wide association studies

(14)  Mieth, Bettina a   Kloft, Marius b   Rodríguez, Juan Antonio c   Sonnenburg, Sören d   Vobruba, Robin a   Morcillo Suárez, Carlos c   Farré, Xavier c   Marigorta, Urko M e   Fehr, Ernst f   Dickhaus, Thorsten g   Blanchard, Gilles h   Schunk, Daniel i   Navarro, Arcadi c,j,k   Müller, Klaus Robert a,l  


Author keywords

[No Author keywords available]

Indexed keywords

GENOME-WIDE ASSOCIATION STUDY; MACHINE LEARNING; STATISTICAL SIGNIFICANCE;

EID: 84999740191     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep36671     Document Type: Article
Times cited : (57)

References (77)
  • 1
    • 84969213492 scopus 로고    scopus 로고
    • Genome-wide association study of 14, 000 cases of seven common diseases and 3, 000 shared controls
    • The Wellcome Trust Case Control Consortium
    • The Wellcome Trust Case Control Consortium. Genome-wide association study of 14, 000 cases of seven common diseases and 3, 000 shared controls. Nature 447, 661-678 (2007
    • (2007) Nature , vol.447 , pp. 661-678
  • 2
    • 84879324656 scopus 로고    scopus 로고
    • Pitfalls of predicting complex traits from SNPs
    • Wray, N. R. et al. Pitfalls of predicting complex traits from SNPs. Nat. Rev. Genet. 14, 507-515 (2013
    • (2013) Nat. Rev. Genet , vol.14 , pp. 507-515
    • Wray, N.R.1
  • 3
    • 84890231680 scopus 로고    scopus 로고
    • Beyond GWASs: Illuminating the dark road from association to function
    • Edwards, S. L., Beesley, J., French, J. D., & Dunning, A. M. Beyond GWASs: illuminating the dark road from association to function. Am. J. Hum. Genet. 93, 779-797 (2013
    • (2013) Am. J. Hum. Genet , vol.93 , pp. 779-797
    • Edwards, S.L.1    Beesley, J.2    French, J.D.3    Dunning, A.M.4
  • 5
    • 84885020424 scopus 로고    scopus 로고
    • Genome-wide association analysis identifies 13 new risk loci for schizophrenia
    • Ripke, S. et al. Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nat. Genet. 45, 1150-1159 (2013
    • (2013) Nat. Genet , vol.45 , pp. 1150-1159
    • Ripke, S.1
  • 6
    • 84887058596 scopus 로고    scopus 로고
    • Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis
    • Beecham, A. H. et al. Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis. Nat. Genet. 45, 1353-1360 (2013
    • (2013) Nat. Genet , vol.45 , pp. 1353-1360
    • Beecham, A.H.1
  • 7
    • 67249117049 scopus 로고    scopus 로고
    • Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
    • Catalog of Published Genome-Wide Association Studies at
    • Hindorff, L. A. et al. Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proc. Natl. Acad. Sci. 106, 9362-9367 Catalog of Published Genome-Wide Association Studies at www.genome.gov/gwastudies (2009
    • (2009) Proc. Natl. Acad. Sci , vol.106 , pp. 9362-9367
    • Hindorff, L.A.1
  • 8
    • 84891790401 scopus 로고    scopus 로고
    • The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
    • Welter, D. et al. The NHGRI GWAS Catalog, a curated resource of SNP-trait associations. Nucleic Acids Res. 42, D1001-D1006 (2014
    • (2014) Nucleic Acids Res , vol.42 , pp. D1001-D1006
    • Welter, D.1
  • 9
    • 70349956433 scopus 로고    scopus 로고
    • Finding the missing heritability of complex diseases
    • Manolio, T. a. et al. Finding the missing heritability of complex diseases. Nature 461, 747-753 (2009
    • (2009) Nature , vol.461 , pp. 747-753
    • Manolio, T.A.1
  • 10
    • 79952489475 scopus 로고    scopus 로고
    • Estimating missing heritability for disease from genome-wide association studies
    • Lee, S. H., Wray, N. R., Goddard, M. E., & Visscher, P. M. Estimating missing heritability for disease from genome-wide association studies. Am. J. Hum. Genet. 88, 294-305 (2011
    • (2011) Am. J. Hum. Genet , vol.88 , pp. 294-305
    • Lee, S.H.1    Wray, N.R.2    Goddard, M.E.3    Visscher, P.M.4
  • 11
    • 84855925920 scopus 로고    scopus 로고
    • Rare and common variants: Twenty arguments
    • Gibson, G. Rare and common variants: twenty arguments. Nat. Rev. Genet. 13, 135-145 (2012
    • (2012) Nat. Rev. Genet , vol.13 , pp. 135-145
    • Gibson, G.1
  • 12
    • 84856405512 scopus 로고    scopus 로고
    • The mystery of missing heritability: Genetic interactions create phantom heritability
    • Zuk, O., Hechter, E., Sunyaev, S. R., & Lander, E. S. The mystery of missing heritability: Genetic interactions create phantom heritability. Proc. Natl. Acad. Sci. 109, 1193-1198 (2012
    • (2012) Proc. Natl. Acad. Sci , vol.109 , pp. 1193-1198
    • Zuk, O.1    Hechter, E.2    Sunyaev, S.R.3    Lander, E.S.4
  • 13
    • 84890562372 scopus 로고    scopus 로고
    • Epistasis and quantitative traits: Using model organisms to study gene-gene interactions
    • Mackay, T. F. C. Epistasis and quantitative traits: using model organisms to study gene-gene interactions. Nat. Rev. Genet. 15, 22-33 (2014
    • (2014) Nat. Rev. Genet , vol.15 , pp. 22-33
    • MacKay, T.F.C.1
  • 14
    • 84873181536 scopus 로고    scopus 로고
    • An exhaustive epistatic SNP association analysis on expanded Wellcome Trust data
    • Lippert, C. et al. An exhaustive epistatic SNP association analysis on expanded Wellcome Trust data. Sci. Rep. 3, 1099 (2013
    • (2013) Sci. Rep , vol.3 , pp. 1099
    • Lippert, C.1
  • 15
    • 84988001472 scopus 로고    scopus 로고
    • On asymptotically optimal confidence regions and tests for high-dimensional models
    • Van de Geer, S., Bühlmann, P., Ritov, Y., & Dezeure, R. On asymptotically optimal confidence regions and tests for high-dimensional models. Ann. Stat. 42, 1166-1202 (2014
    • (2014) Ann. Stat , vol.42 , pp. 1166-1202
    • Van De Geer, S.1    Bühlmann, P.2    Ritov, Y.3    Dezeure, R.4
  • 17
    • 34249753618 scopus 로고
    • Support-vector networks
    • Cortes, C., & Vapnik, V. Support-vector networks. Mach. Learn. 20, 273-297 (1995
    • (1995) Mach. Learn , vol.20 , pp. 273-297
    • Cortes, C.1    Vapnik, V.2
  • 20
    • 50249187303 scopus 로고    scopus 로고
    • On multiple-testing correction in genome-wide association studies
    • Moskvina, V., & Schmidt, K. M. On multiple-testing correction in genome-wide association studies. Genet. Epidemiol. 32, 567-573 (2008
    • (2008) Genet. Epidemiol , vol.32 , pp. 567-573
    • Moskvina, V.1    Schmidt, K.M.2
  • 21
    • 84926259359 scopus 로고    scopus 로고
    • Multiple point hypothesis test problems and effective numbers of tests for control of the family-wise error rate
    • Dickhaus, T., & Stange, J. Multiple point hypothesis test problems and effective numbers of tests for control of the family-wise error rate. Calcutta Stat. Assoc. Bull. 65, 123-144 (2013
    • (2013) Calcutta Stat. Assoc. Bull , vol.65 , pp. 123-144
    • Dickhaus, T.1    Stange, J.2
  • 24
    • 84885060864 scopus 로고    scopus 로고
    • Asymptotic optimality of the Westfall-Young permutation procedure for multiple testing under dependence
    • Meinshausen, N., Maathuis, M. H., & Bühlmann, P. Asymptotic optimality of the Westfall-Young permutation procedure for multiple testing under dependence. Ann. Stat. 39, 3369-3391 (2011
    • (2011) Ann. Stat , vol.39 , pp. 3369-3391
    • Meinshausen, N.1    Maathuis, M.H.2    Bühlmann, P.3
  • 27
    • 69049091975 scopus 로고    scopus 로고
    • High-dimensional variable selection
    • Wasserman, L., & Roeder, K. High-dimensional variable selection. Ann. Stat. 37, 2178-2201 (2009
    • (2009) Ann. Stat , vol.37 , pp. 2178-2201
    • Wasserman, L.1    Roeder, K.2
  • 28
    • 44149108232 scopus 로고    scopus 로고
    • Multiple Testing Procedures with Applications to Genomics
    • Springer
    • Dudoit, S., & van der Laan, M. Multiple Testing Procedures with Applications to Genomics. (Springer Science, & Business Media, 2008
    • (2008) Science, & Business Media
    • Dudoit, S.1    Van Der Laan, M.2
  • 29
    • 77955169164 scopus 로고    scopus 로고
    • Genome-Wide Significance Levels and Weighted Hypothesis Testing
    • Roeder, K., & Wasserman, L. Genome-Wide Significance Levels and Weighted Hypothesis Testing. Stat. Sci. 24, 398-413 (2009
    • (2009) Stat Sci , vol.24 , pp. 398-413
    • Roeder, K.1    Wasserman, L.2
  • 30
    • 79955984463 scopus 로고    scopus 로고
    • Ranking causal variants and associated regions in genome-wide association studies by the support vector machine and random forest
    • Roshan, U., Chikkagoudar, S., Wei, Z., Wang, K., & Hakonarson, H. Ranking causal variants and associated regions in genome-wide association studies by the support vector machine and random forest. Nucleic Acids Res. 39, e62 (2011
    • (2011) Nucleic Acids Res , vol.39 , pp. e62
    • Roshan, U.1    Chikkagoudar, S.2    Wei, Z.3    Wang, K.4    Hakonarson, H.5
  • 31
    • 80054719506 scopus 로고    scopus 로고
    • Stability selection for genome-wide association
    • Alexander, D. H., & Lange, K. Stability selection for genome-wide association. Genet. Epidemiol. 35, 722-728 (2011
    • (2011) Genet. Epidemiol , vol.35 , pp. 722-728
    • Alexander, D.H.1    Lange, K.2
  • 32
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • The HapMap International Consortium
    • The HapMap International Consortium. A haplotype map of the human genome. Nature 437, 1299-1320 (2005
    • (2005) Nature , vol.437 , pp. 1299-1320
  • 33
    • 84879655915 scopus 로고    scopus 로고
    • High Trans-ethnic Replicability of GWAS Results Implies Common Causal Variants
    • Marigorta, U. M., & Navarro, A. High Trans-ethnic Replicability of GWAS Results Implies Common Causal Variants. PLoS Genet 9, e1003566 (2013
    • (2013) PLoS Genet , vol.9 , pp. e1003566
    • Marigorta, U.M.1    Navarro, A.2
  • 34
    • 84861012357 scopus 로고    scopus 로고
    • Evolutionary dynamics of co-segregating gene clusters associated with complex diseases
    • Preuss, C., Riemenschneider, M., Wiedmann, D., & Stoll, M. Evolutionary dynamics of co-segregating gene clusters associated with complex diseases. PLoS One 7, e36205 (2012
    • (2012) PLoS One , vol.7 , pp. e36205
    • Preuss, C.1    Riemenschneider, M.2    Wiedmann, D.3    Stoll, M.4
  • 35
    • 50949133669 scopus 로고    scopus 로고
    • LIBLINEAR: A Library for Large Linear Classification
    • Software available at
    • Fan, R.-E., Chang, K.-W., Hsieh, C.-J., Wang, X.-R., & Lin, C.-J. LIBLINEAR: A Library for Large Linear Classification. Journal of Machine Learning Research 9, 1871-1874. Software available at http: //www.csie.ntu.edu.tw/~cjlin/liblinear (2008
    • (2008) Journal of Machine Learning Research , vol.9 , pp. 1871-1874
    • Fan, R.-E.1    Chang, K.-W.2    Hsieh, C.-J.3    Wang, X.-R.4    Lin, C.-J.5
  • 36
    • 79955702502 scopus 로고    scopus 로고
    • LIBSVM a library for support vector machines
    • Software available at
    • Chang, C.-C., & Lin, C.-L. LIBSVM: a library for support vector machines. ACM Trans. Intell. Syst. Technol. 2(27), 1-27. Software available at http: //www.csie.ntu.edu.tw/~cjlin/libsvm (2011
    • (2011) ACM Trans. Intell. Syst. Technol , vol.2 , Issue.27 , pp. 1-27
    • Chang, C.-C.1    Lin, C.-L.2
  • 37
    • 84979494516 scopus 로고    scopus 로고
    • The Apache Software Foundation Java version 1.7. Software available at
    • The Apache Software Foundation. Commons Math: The Apache Commons Mathematics Library. Java version 1.7. Software available at http: //commons.apache.org/proper/commons-math/ (2016
    • (2016) Commons Math: The Apache Commons Mathematics Library
  • 43
    • 84869085776 scopus 로고    scopus 로고
    • Use of support vector machines for disease risk prediction in genome-wide association studies: Concerns and opportunities
    • Mittag, F. et al. Use of support vector machines for disease risk prediction in genome-wide association studies: Concerns and opportunities. Hum. Mutat. 33, 1708-1718 (2012
    • (2012) Hum. Mutat , vol.33 , pp. 1708-1718
    • Mittag, F.1
  • 44
    • 78649379906 scopus 로고    scopus 로고
    • Improved Prediction of Cardiovascular Disease Based on a Panel of Single Nucleotide Polymorphisms Identified Through Genome-Wide Association Studies
    • Davies, R. W. et al. Improved Prediction of Cardiovascular Disease Based on a Panel of Single Nucleotide Polymorphisms Identified Through Genome-Wide Association Studies. Circ. Cardiovasc. Genet. 3, 468-474 (2010
    • (2010) Circ. Cardiovasc. Genet , vol.3 , pp. 468-474
    • Davies, R.W.1
  • 45
    • 69449102525 scopus 로고    scopus 로고
    • Harnessing the information contained within genome-wide association studies to improve individual prediction of complex disease risk
    • Evans, D. M., Visscher, P. M., & Wray, N. R. Harnessing the information contained within genome-wide association studies to improve individual prediction of complex disease risk. Hum. Mol. Genet. 18, 3525-3531 (2009
    • (2009) Hum. Mol. Genet , vol.18 , pp. 3525-3531
    • Evans, D.M.1    Visscher, P.M.2    Wray, N.R.3
  • 46
    • 71849106791 scopus 로고    scopus 로고
    • Prediction of Cardiovascular Disease Outcomes and Established Cardiovascular Risk Factors by Genome-Wide Association Markers
    • Ioannidis, J. P. A. Prediction of Cardiovascular Disease Outcomes and Established Cardiovascular Risk Factors by Genome-Wide Association Markers. Circ. Cardiovasc. Genet. 2, 7-15 (2009
    • (2009) Circ. Cardiovasc. Genet , vol.2 , pp. 7-15
    • Ioannidis, J.P.A.1
  • 47
    • 77956385510 scopus 로고    scopus 로고
    • Risk prediction using genome-wide association studies
    • Kooperberg, C., LeBlanc, M., & Obenchain, V. Risk prediction using genome-wide association studies. Genet. Epidemiol. 34, 643-652 (2010
    • (2010) Genet. Epidemiol , vol.34 , pp. 643-652
    • Kooperberg, C.1    LeBlanc, M.2    Obenchain, V.3
  • 48
  • 49
    • 73449129712 scopus 로고    scopus 로고
    • From Disease Association to Risk Assessment: An Optimistic View from Genome-Wide Association Studies on Type 1 Diabetes
    • Wei, Z. et al. From Disease Association to Risk Assessment: An Optimistic View from Genome-Wide Association Studies on Type 1 Diabetes. PLoS Genet. 5, e1000678 (2009
    • (2009) PLoS Genet , vol.5 , pp. e1000678
    • Wei, Z.1
  • 50
    • 84878829383 scopus 로고    scopus 로고
    • Large Sample Size Wide Variant Spectrum, and Advanced Machine-Learning Technique Boost Risk Prediction for Inflammatory Bowel Disease
    • Wei, Z. et al. Large Sample Size, Wide Variant Spectrum, and Advanced Machine-Learning Technique Boost Risk Prediction for Inflammatory Bowel Disease. Am. J. Hum. Genet. 92, 1008-1012 (2013
    • (2013) Am. J. Hum. Genet , vol.92 , pp. 1008-1012
    • Wei, Z.1
  • 51
    • 77649209124 scopus 로고    scopus 로고
    • The genetic interpretation of area under the ROC curve in genomic profiling
    • Wray, N. R., Yang, J., Goddard, M. E., & Visscher, P. M. The genetic interpretation of area under the ROC curve in genomic profiling. PLoS Genet. 6, e1000864 (2010
    • (2010) PLoS Genet , vol.6 , pp. e1000864
    • Wray, N.R.1    Yang, J.2    Goddard, M.E.3    Visscher, P.M.4
  • 52
    • 84878847708 scopus 로고    scopus 로고
    • Penalized regression and risk prediction in genome-wide association studies
    • Austin, E., Pan, W., & Shen, X. Penalized regression and risk prediction in genome-wide association studies. Stat. Anal. Data Min. 6, 315-328 (2013
    • (2013) Stat. Anal. Data Min , vol.6 , pp. 315-328
    • Austin, E.1    Pan, W.2    Shen, X.3
  • 53
    • 84912141486 scopus 로고    scopus 로고
    • Regularized machine learning in the genetic prediction of complex traits
    • Okser, S. et al. Regularized machine learning in the genetic prediction of complex traits. PLoS Genet. 10, e1004754 (2014
    • (2014) PLoS Genet , vol.10 , pp. e1004754
    • Okser, S.1
  • 54
    • 84866484354 scopus 로고    scopus 로고
    • SNP selection and classification of genome-wide SNP data using stratified sampling random forests
    • Wu, Q., Ye, Y., Liu, Y., & Ng, M. K. SNP selection and classification of genome-wide SNP data using stratified sampling random forests. IEEE Trans. Nanobiosci. 11, 216-227 (2012
    • (2012) IEEE Trans. Nanobiosci , vol.11 , pp. 216-227
    • Wu, Q.1    Ye, Y.2    Liu, Y.3    Ng, M.K.4
  • 55
    • 77954485448 scopus 로고    scopus 로고
    • On safari to Random Jungle: A fast implementation of Random Forests for high-dimensional data
    • Schwarz, D. F., König, I. R., & Ziegler, A. On safari to Random Jungle: a fast implementation of Random Forests for high-dimensional data. Bioinformatics 26, 1752-1758 (2010
    • (2010) Bioinformatics , vol.26 , pp. 1752-1758
    • Schwarz, D.F.1    König, I.R.2    Ziegler, A.3
  • 56
    • 84872542418 scopus 로고    scopus 로고
    • A Lasso multi-marker mixed model for association mapping with population structure correction
    • Rakitsch, B., Lippert, C., Stegle, O., & Borgwardt, K. A Lasso multi-marker mixed model for association mapping with population structure correction. Bioinformatics 29, 206-214 (2013
    • (2013) Bioinformatics , vol.29 , pp. 206-214
    • Rakitsch, B.1    Lippert, C.2    Stegle, O.3    Borgwardt, K.4
  • 57
    • 78751507648 scopus 로고    scopus 로고
    • Mining gold dust under the genome wide significance level: A two-stage approach to analysis of GWAS
    • Shi, G. et al. Mining gold dust under the genome wide significance level: a two-stage approach to analysis of GWAS. Genet. Epidemiol. 35, 111-118 (2011
    • (2011) Genet. Epidemiol , vol.35 , pp. 111-118
    • Shi, G.1
  • 59
    • 84860329371 scopus 로고    scopus 로고
    • Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations
    • Pahikkala, T., Okser, S., Airola, A., Salakoski, T., & Aittokallio, T. Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations. Algorithms Mol. Biol. 7, 11 (2012
    • (2012) Algorithms Mol. Biol , vol.7 , pp. 11
    • Pahikkala, T.1    Okser, S.2    Airola, A.3    Salakoski, T.4    Aittokallio, T.5
  • 60
    • 78650540144 scopus 로고    scopus 로고
    • A variable selection method for genome-wide association studies
    • He, Q., & Lin, D. Y. Y. A variable selection method for genome-wide association studies. Bioinformatics 27, 1-8 (2011
    • (2011) Bioinformatics , vol.27 , pp. 1-8
    • He, Q.1    Lin, D.Y.Y.2
  • 61
    • 77957233032 scopus 로고    scopus 로고
    • Association screening of common and rare genetic variants by penalized regression
    • Zhou, H., Sehl, M. E., Sinsheimer, J. S., & Lange, K. Association screening of common and rare genetic variants by penalized regression. Bioinformatics 26, 2375-2382 (2010
    • (2010) Bioinformatics , vol.26 , pp. 2375-2382
    • Zhou, H.1    Sehl, M.E.2    Sinsheimer, J.S.3    Lange, K.4
  • 62
    • 84928259367 scopus 로고    scopus 로고
    • Risk classification with an adaptive naive Bayes Kernel machine model
    • Minnier, J., Yuan, M., Liu, J. S., & Cai, T. Risk classification with an adaptive naive Bayes Kernel machine model. J. Am. Stat. Assoc. 110, 393-404 (2015
    • (2015) J. Am. Stat. Assoc , vol.110 , pp. 393-404
    • Minnier, J.1    Yuan, M.2    Liu, J.S.3    Cai, T.4
  • 63
    • 84941081016 scopus 로고    scopus 로고
    • Genome-wide association data classification and SNPs selection using two-stage quality-based
    • Nguyen, T. T., Huang, J. Z., Wu, Q., Nguyen, T. T., & Li, M. J. Genome-wide association data classification and SNPs selection using two-stage quality-based Random Forests. BMC Genomics 16, S5 (2015
    • (2015) Random Forests BMC Genomics , vol.16 , pp. S5
    • Nguyen, T.T.1    Huang, J.Z.2    Wu, Q.3    Nguyen, T.T.4    Li, M.J.5
  • 64
    • 84923592466 scopus 로고    scopus 로고
    • Variable selection in Bayesian generalized linear-mixed models: An illustration using candidate gene case-control association studies
    • Tsai, M. Y. Variable selection in Bayesian generalized linear-mixed models: An illustration using candidate gene case-control association studies. Biometrical Journal 57, 234-253 (2015
    • (2015) Biometrical Journal , vol.57 , pp. 234-253
    • Tsai, M.Y.1
  • 65
    • 84883358635 scopus 로고    scopus 로고
    • Predicting disease risk using bootstrap ranking and classification algorithms
    • Manor, O., & Segal, E. Predicting disease risk using bootstrap ranking and classification algorithms. PLoS Comput. Biol. 9, e1003200 (2013
    • (2013) PLoS Comput. Biol , vol.9 , pp. e1003200
    • Manor, O.1    Segal, E.2
  • 66
    • 84879525222 scopus 로고    scopus 로고
    • PUMA: A unified framework for penalized multiple regression analysis of GWAS data
    • Hoffman, G. E., Logsdon, B. A., & Mezey, J. G. PUMA: a unified framework for penalized multiple regression analysis of GWAS data. PLoS Comput. Biol. 9, e1003101 (2013
    • (2013) PLoS Comput. Biol , vol.9 , pp. e1003101
    • Hoffman, G.E.1    Logsdon, B.A.2    Mezey, J.G.3
  • 67
    • 84941711235 scopus 로고    scopus 로고
    • Bayesian feature selection for high-dimensional linear regression via the Ising approximation with applications to genomics
    • Fisher, C. K., & Mehta, P. Bayesian feature selection for high-dimensional linear regression via the Ising approximation with applications to genomics. Bioinformatics 11, 1754-1761 (2015
    • (2015) Bioinformatics , vol.11 , pp. 1754-1761
    • Fisher, C.K.1    Mehta, P.2
  • 69
  • 70
    • 53849086824 scopus 로고    scopus 로고
    • Sure independence screening for ultrahigh dimensional feature space
    • Fan, J., & Lv, J. Sure independence screening for ultrahigh dimensional feature space. J. R. Stat. Soc. Ser. B Statistical Methodol. 70, 849-911 (2008
    • (2008) J. R. Stat. Soc. Ser. B Statistical Methodol , vol.70 , pp. 849-911
    • Fan, J.1    Lv, J.2
  • 71
    • 84919460050 scopus 로고    scopus 로고
    • A fast algorithm for detecting gene-gene interactions in genome-wide association studies
    • Li, J., Zhong, W., Li, R., & Wu, R. A fast algorithm for detecting gene-gene interactions in genome-wide association studies. The annals of applied statistics 8, 2292 (2014
    • (2014) The Annals of Applied Statistics , vol.8 , pp. 2292
    • Li, J.1    Zhong, W.2    Li, R.3    Wu, R.4
  • 72
    • 80053372166 scopus 로고    scopus 로고
    • FaST linear mixed models for genome-wide association studies
    • Lippert, C. et al. FaST linear mixed models for genome-wide association studies. Nat. Methods 8, 833-835 (2011
    • (2011) Nat. Methods , vol.8 , pp. 833-835
    • Lippert, C.1
  • 73
    • 84937844125 scopus 로고    scopus 로고
    • Posterior predictive checks to quantify lack-of-fit in admixture models of latent population structure
    • Mimno, D., Blei, D. M., & Engelhardt, B. E. Posterior predictive checks to quantify lack-of-fit in admixture models of latent population structure. Proc. Natl. Acad. Sci. 112, 3441-3450 (2015
    • (2015) Proc. Natl. Acad. Sci , vol.112 , pp. 3441-3450
    • Mimno, D.1    Blei, D.M.2    Engelhardt, B.E.3
  • 74
    • 84924060689 scopus 로고    scopus 로고
    • Efficient Bayesian mixed-model analysis increases association power in large cohorts
    • Loh, P. R. et al. Efficient Bayesian mixed-model analysis increases association power in large cohorts. Nat. Genet. 47, 284-290 (2015
    • (2015) Nat. Genet , vol.47 , pp. 284-290
    • Loh, P.R.1
  • 75
    • 84929130444 scopus 로고    scopus 로고
    • Testing for genetic associations in arbitrarily structured populations
    • Song, M., Hao, W., & Storey, J. D. Testing for genetic associations in arbitrarily structured populations. Nat. Genet. 47, 550-554 (2015
    • (2015) Nat. Genet , vol.47 , pp. 550-554
    • Song, M.1    Hao, W.2    Storey, J.D.3
  • 76
    • 84897954264 scopus 로고    scopus 로고
    • Efficient multivariate linear mixed model algorithms for genome-wide association studies
    • Zhou, X., & Stephens, M. Efficient multivariate linear mixed model algorithms for genome-wide association studies. Nat. Methods 11, 407-409 (2014
    • (2014) Nat. Methods , vol.11 , pp. 407-409
    • Zhou, X.1    Stephens, M.2
  • 77
    • 45149105926 scopus 로고    scopus 로고
    • Efficient control of population structure in model organism association mapping
    • Kang, H. M. et al. Efficient control of population structure in model organism association mapping. Genetics 178, 1709-1723 (2008
    • (2008) Genetics , vol.178 , pp. 1709-1723
    • Kang, H.M.1


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