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Volumn 106, Issue , 2016, Pages 21-28

Aptamers: The “evolution” of SELEX

Author keywords

Aptamers; SELEX

Indexed keywords

APTAMER;

EID: 84999263587     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2016.04.020     Document Type: Review
Times cited : (126)

References (86)
  • 1
    • 33847196810 scopus 로고    scopus 로고
    • Aptamer-based detection of plasma proteins by an electrochemical assay coupled to magnetic beads
    • [1] Centi, S., Tombelli, S., Minunni, M., Mascini, M., Aptamer-based detection of plasma proteins by an electrochemical assay coupled to magnetic beads. Anal. Chem. 79 (2007), 1466–1473.
    • (2007) Anal. Chem. , vol.79 , pp. 1466-1473
    • Centi, S.1    Tombelli, S.2    Minunni, M.3    Mascini, M.4
  • 2
    • 28444491961 scopus 로고    scopus 로고
    • Light-switching excimer probes for rapid protein monitoring in complex biological fluids
    • [2] Yang, C., Jockusch, S., Vicens, M., Turro, N.J., Tan, W., Light-switching excimer probes for rapid protein monitoring in complex biological fluids. Proc. Natl. Acad. Sci. U.S.A. 102 (2005), 17278–17283.
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 17278-17283
    • Yang, C.1    Jockusch, S.2    Vicens, M.3    Turro, N.J.4    Tan, W.5
  • 3
    • 34250902024 scopus 로고    scopus 로고
    • Simple and rapid colorimetric biosensors based on DNA aptamer and noncrosslinking gold nanoparticle aggregation
    • [3] Zhao, W., Chiuman, W., Brook, M.A., Li, Y., Simple and rapid colorimetric biosensors based on DNA aptamer and noncrosslinking gold nanoparticle aggregation. ChemBioChem, 2007.
    • (2007) ChemBioChem
    • Zhao, W.1    Chiuman, W.2    Brook, M.A.3    Li, Y.4
  • 4
    • 84876315859 scopus 로고    scopus 로고
    • Aptamer/thrombin/aptamer-AuNPs sandwich enhanced surface plasmon resonance sensor for the detection of subnanomolar thrombin
    • [4] Bai, Y., Feng, F., Zhao, L., Wang, C., Wang, H., Tian, M., et al. Aptamer/thrombin/aptamer-AuNPs sandwich enhanced surface plasmon resonance sensor for the detection of subnanomolar thrombin. Biosens. Bioelectron. 47 (2013), 265–270.
    • (2013) Biosens. Bioelectron. , vol.47 , pp. 265-270
    • Bai, Y.1    Feng, F.2    Zhao, L.3    Wang, C.4    Wang, H.5    Tian, M.6
  • 5
    • 24644478623 scopus 로고    scopus 로고
    • Label-free electronic detection of thrombin in blood serum by using an aptamer-based sensor
    • [5] Xiao, Y., Lubin, A.A., Heeger, A.J., Plaxco, K.W., Label-free electronic detection of thrombin in blood serum by using an aptamer-based sensor. Angew. Chem. Int. Ed. Engl. 44 (2005), 5456–5459.
    • (2005) Angew. Chem. Int. Ed. Engl. , vol.44 , pp. 5456-5459
    • Xiao, Y.1    Lubin, A.A.2    Heeger, A.J.3    Plaxco, K.W.4
  • 6
    • 2342421271 scopus 로고    scopus 로고
    • Structure-switching signaling aptamers: Transducing molecular recognition into fluorescence signaling
    • [6] Nutiu, R., Li, Y., Structure-switching signaling aptamers: Transducing molecular recognition into fluorescence signaling. Chemistry, 2004.
    • (2004) Chemistry
    • Nutiu, R.1    Li, Y.2
  • 7
    • 0034086583 scopus 로고    scopus 로고
    • Molecular beacon aptamer fluoresces in the presence of Tat protein of HIV-1
    • [7] Yamamoto, R., Kumar, P.K.R., Molecular beacon aptamer fluoresces in the presence of Tat protein of HIV-1. Genes Cells, 2000.
    • (2000) Genes Cells
    • Yamamoto, R.1    Kumar, P.K.R.2
  • 9
    • 25844513658 scopus 로고    scopus 로고
    • A phase II randomized double-masked trial of pegaptanib, an anti-vascular endothelial growth factor aptamer, for diabetic macular edema
    • [9] Cunningham, E., Adamis, A., Altaweel, M., Aiello, L., Bressler, N., D'Amico, D., et al. A phase II randomized double-masked trial of pegaptanib, an anti-vascular endothelial growth factor aptamer, for diabetic macular edema. Ophthalmology 112 (2005), 1747–1757.
    • (2005) Ophthalmology , vol.112 , pp. 1747-1757
    • Cunningham, E.1    Adamis, A.2    Altaweel, M.3    Aiello, L.4    Bressler, N.5    D'Amico, D.6
  • 10
    • 33645095226 scopus 로고    scopus 로고
    • Pegaptanib, a targeted anti-VEGF aptamer for ocular vascular disease
    • [10] Ng, E.W.M., Shima, D.T., Calias, P., Pegaptanib, a targeted anti-VEGF aptamer for ocular vascular disease. Nat. Rev. Drug Discovery 5 (2006), 123–132.
    • (2006) Nat. Rev. Drug Discovery , vol.5 , pp. 123-132
    • Ng, E.W.M.1    Shima, D.T.2    Calias, P.3
  • 11
    • 0035879386 scopus 로고    scopus 로고
    • Aptamer beacons for the direct detection of proteins
    • [11] Hamaguchi, N., Ellington, A., Stanton, M., Aptamer beacons for the direct detection of proteins. Anal. Biochem. 294 (2001), 126–131.
    • (2001) Anal. Biochem. , vol.294 , pp. 126-131
    • Hamaguchi, N.1    Ellington, A.2    Stanton, M.3
  • 12
    • 0036297293 scopus 로고    scopus 로고
    • Molecular aptamer beacons for real-time protein recognition
    • [12] Li, J.J., Fang, X., Tan, W., Molecular aptamer beacons for real-time protein recognition. Biochem. Biophys. Res. Commun. 292 (2002), 31–40.
    • (2002) Biochem. Biophys. Res. Commun. , vol.292 , pp. 31-40
    • Li, J.J.1    Fang, X.2    Tan, W.3
  • 13
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • [13] Ellington, A.D., Szostak, J.W., In vitro selection of RNA molecules that bind specific ligands. Nature 346 (1990), 818–822.
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 14
    • 0025194307 scopus 로고
    • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
    • [14] Tuerk, C., Gold, L., Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science (New York, N.Y.) 249 (1990), 505–510.
    • (1990) Science (New York, N.Y.) , vol.249 , pp. 505-510
    • Tuerk, C.1    Gold, L.2
  • 15
    • 84862513973 scopus 로고    scopus 로고
    • General colorimetric detection of proteins and small molecules based on cyclic enzymatic signal amplification and hairpin aptamer probe
    • [15] Li, J., Fu, H.-E.E., Wu, L.-J.J., Zheng, A.-X.X., Chen, G.-N.N., Yang, H.-H.H., General colorimetric detection of proteins and small molecules based on cyclic enzymatic signal amplification and hairpin aptamer probe. Anal. Chem. 84 (2012), 5309–5315.
    • (2012) Anal. Chem. , vol.84 , pp. 5309-5315
    • Li, J.1    Fu, H.-E.E.2    Wu, L.-J.J.3    Zheng, A.-X.X.4    Chen, G.-N.N.5    Yang, H.-H.H.6
  • 16
    • 79957988644 scopus 로고    scopus 로고
    • Nano C60: a novel, effective, fluorescent sensing platform for biomolecular detection
    • [16] Li, H., Zhang, Y., Luo, Y., Sun, X., Nano C60: a novel, effective, fluorescent sensing platform for biomolecular detection. Small 7 (2011), 1562–1568.
    • (2011) Small , vol.7 , pp. 1562-1568
    • Li, H.1    Zhang, Y.2    Luo, Y.3    Sun, X.4
  • 17
    • 0036255761 scopus 로고    scopus 로고
    • Protein detection using proximity-dependent DNA ligation assays
    • [17] Fredriksson, S., Gullberg, M., Jarvius, J., Olsson, C., Protein detection using proximity-dependent DNA ligation assays. Nat. Biotechnol. 20 (2002), 473–477.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 473-477
    • Fredriksson, S.1    Gullberg, M.2    Jarvius, J.3    Olsson, C.4
  • 18
    • 28644438323 scopus 로고    scopus 로고
    • Proximity extension of circular DNA aptamers with real-time protein detection
    • [18] Giusto, D.D.A., Wlassoff, W.A., Gooding, J.J., Proximity extension of circular DNA aptamers with real-time protein detection. Nucleic Acids Res., 33, 2005.
    • (2005) Nucleic Acids Res. , vol.33
    • Giusto, D.D.A.1    Wlassoff, W.A.2    Gooding, J.J.3
  • 19
    • 13844308093 scopus 로고    scopus 로고
    • Nucleic acid-based fluorescence sensors for detecting proteins
    • [19] Heyduk, E., Heyduk, T., Nucleic acid-based fluorescence sensors for detecting proteins. Anal. Chem. 77 (2005), 1147–1156.
    • (2005) Anal. Chem. , vol.77 , pp. 1147-1156
    • Heyduk, E.1    Heyduk, T.2
  • 20
    • 33750608604 scopus 로고    scopus 로고
    • Nonantibody-based recognition: alternative molecules for detection of pathogens
    • [20] Ngundi, M.M., Kulagina, N.V., Anderson, G.P., Taitt, C.R., Nonantibody-based recognition: alternative molecules for detection of pathogens. Expert Rev. Proteomics 3 (2006), 511–524.
    • (2006) Expert Rev. Proteomics , vol.3 , pp. 511-524
    • Ngundi, M.M.1    Kulagina, N.V.2    Anderson, G.P.3    Taitt, C.R.4
  • 21
    • 34248564586 scopus 로고    scopus 로고
    • Aptamers-based assays for diagnostics, environmental and food analysis
    • [21] Tombelli, S., Minunni, M., Mascini, M., Aptamers-based assays for diagnostics, environmental and food analysis. Biomol. Eng. 24 (2007), 191–200.
    • (2007) Biomol. Eng. , vol.24 , pp. 191-200
    • Tombelli, S.1    Minunni, M.2    Mascini, M.3
  • 22
    • 27644440466 scopus 로고    scopus 로고
    • FluMag-SELEX as an advantageous method for DNA aptamer selection
    • [22] Stoltenburg, R., Reinemann, C., Strehlitz, B., FluMag-SELEX as an advantageous method for DNA aptamer selection. Anal. Bioanal. Chem. 383 (2005), 83–91.
    • (2005) Anal. Bioanal. Chem. , vol.383 , pp. 83-91
    • Stoltenburg, R.1    Reinemann, C.2    Strehlitz, B.3
  • 23
    • 77957372629 scopus 로고    scopus 로고
    • Where are all the aptamers?
    • [23] Baird, G.S., Where are all the aptamers?. Am. J. Clin. Pathol. 134 (2010), 529–531.
    • (2010) Am. J. Clin. Pathol. , vol.134 , pp. 529-531
    • Baird, G.S.1
  • 24
    • 66249097058 scopus 로고    scopus 로고
    • Functional nucleic acid sensors
    • [24] Liu, J., Cao, Z., Lu, Y., Functional nucleic acid sensors. Chem. Rev. 109 (2009), 1948–1998.
    • (2009) Chem. Rev. , vol.109 , pp. 1948-1998
    • Liu, J.1    Cao, Z.2    Lu, Y.3
  • 26
    • 0037173068 scopus 로고    scopus 로고
    • In vivo properties of an anti-GnRH Spiegelmer: an example of an oligonucleotide-based therapeutic substance class
    • [26] Wlotzka, B., Leva, S., Eschgfäller, B., Burmeister, J., Kleinjung, F., Kaduk, C., et al. In vivo properties of an anti-GnRH Spiegelmer: an example of an oligonucleotide-based therapeutic substance class. Proc. Natl. Acad. Sci. 99 (2002), 8898–8902.
    • (2002) Proc. Natl. Acad. Sci. , vol.99 , pp. 8898-8902
    • Wlotzka, B.1    Leva, S.2    Eschgfäller, B.3    Burmeister, J.4    Kleinjung, F.5    Kaduk, C.6
  • 27
    • 0026337408 scopus 로고
    • Kinetic characterization of ribonuclease-resistant 2’-modified hammerhead ribozymes
    • [27] Pieken, W.A., Olsen, D.B., Benseler, F., Aurup, H., Eckstein, F., Kinetic characterization of ribonuclease-resistant 2’-modified hammerhead ribozymes. Science (New York, N.Y.) 253 (1991), 314–317.
    • (1991) Science (New York, N.Y.) , vol.253 , pp. 314-317
    • Pieken, W.A.1    Olsen, D.B.2    Benseler, F.3    Aurup, H.4    Eckstein, F.5
  • 29
    • 85028572587 scopus 로고    scopus 로고
    • Microfluidic approaches to rapid and efficient aptamer selection
    • [29] Lin, H., Zhang, W., Jia, S., Guan, Z., Yang, C.J., Zhu, Z., Microfluidic approaches to rapid and efficient aptamer selection. Biomicrofluidics, 8, 2014, 41501.
    • (2014) Biomicrofluidics , vol.8 , pp. 41501
    • Lin, H.1    Zhang, W.2    Jia, S.3    Guan, Z.4    Yang, C.J.5    Zhu, Z.6
  • 31
    • 14044259302 scopus 로고    scopus 로고
    • SELEX: just another separation?
    • [31] Bowser, M.T., SELEX: just another separation?. Analyst 130 (2005), 128–130.
    • (2005) Analyst , vol.130 , pp. 128-130
    • Bowser, M.T.1
  • 33
    • 0029758370 scopus 로고    scopus 로고
    • Mirror-design of L-oligonucleotide ligands binding to L-arginine
    • [33] Nolte, A., Klussmann, S., Bald, R., Erdmann, V.A., Fürste, J.P., Mirror-design of L-oligonucleotide ligands binding to L-arginine. Nat. Biotechnol. 14 (1996), 1116–1119.
    • (1996) Nat. Biotechnol. , vol.14 , pp. 1116-1119
    • Nolte, A.1    Klussmann, S.2    Bald, R.3    Erdmann, V.A.4    Fürste, J.P.5
  • 34
    • 17644399512 scopus 로고    scopus 로고
    • Pharmacokinetics and biodistribution of novel aptamer compositions
    • [34] Healy, J.M., Lewis, S.D., Kurz, M., Boomer, R.M., Thompson, K.M., Wilson, C., et al. Pharmacokinetics and biodistribution of novel aptamer compositions. Pharm. Res. 21 (2004), 2234–2246.
    • (2004) Pharm. Res. , vol.21 , pp. 2234-2246
    • Healy, J.M.1    Lewis, S.D.2    Kurz, M.3    Boomer, R.M.4    Thompson, K.M.5    Wilson, C.6
  • 36
    • 0027163099 scopus 로고
    • In vivo anticoagulant properties of a novel nucleotide-based thrombin inhibitor and demonstration of regional anticoagulation in extracorporeal circuits
    • [36] Griffin, L.C., Tidmarsh, G.F., Bock, L.C., Toole, J.J., Leung, L.L., In vivo anticoagulant properties of a novel nucleotide-based thrombin inhibitor and demonstration of regional anticoagulation in extracorporeal circuits. Blood 81 (1993), 3271–3276.
    • (1993) Blood , vol.81 , pp. 3271-3276
    • Griffin, L.C.1    Tidmarsh, G.F.2    Bock, L.C.3    Toole, J.J.4    Leung, L.L.5
  • 37
    • 34447579098 scopus 로고    scopus 로고
    • Microfluidic selection and applications of aptamers
    • [37] Mosing, R.K., Bowser, M.T., Microfluidic selection and applications of aptamers. J. Sep. Sci. 30 (2007), 1420–1426.
    • (2007) J. Sep. Sci. , vol.30 , pp. 1420-1426
    • Mosing, R.K.1    Bowser, M.T.2
  • 39
    • 0034852021 scopus 로고    scopus 로고
    • Automated selection of anti-protein aptamers
    • [39] Cox, J.C., Ellington, A.D., Automated selection of anti-protein aptamers. Bioorg. Med. Chem. 9 (2001), 2525–2531.
    • (2001) Bioorg. Med. Chem. , vol.9 , pp. 2525-2531
    • Cox, J.C.1    Ellington, A.D.2
  • 41
    • 33751078601 scopus 로고    scopus 로고
    • Selection and characterization of RNA aptamers to the RNA-dependent RNA polymerase from foot-and-mouth disease virus
    • [41] Ellingham, M., Bunka, D., Rowlands, D.J., Stonehouse, N.J., Selection and characterization of RNA aptamers to the RNA-dependent RNA polymerase from foot-and-mouth disease virus. RNA 12 (2006), 1970–1979.
    • (2006) RNA , vol.12 , pp. 1970-1979
    • Ellingham, M.1    Bunka, D.2    Rowlands, D.J.3    Stonehouse, N.J.4
  • 42
    • 84890119398 scopus 로고    scopus 로고
    • Selection of 2′F-modified RNA aptamers against prostate-specific antigen and their evaluation for diagnostic and therapeutic applications
    • [42] Svobodova, M., Bunka, D.H.J., Nadal, P., Stockley, P.G., O'Sullivan, C.K., Selection of 2′F-modified RNA aptamers against prostate-specific antigen and their evaluation for diagnostic and therapeutic applications. Anal. Bioanal. Chem., 405, 2013.
    • (2013) Anal. Bioanal. Chem. , vol.405
    • Svobodova, M.1    Bunka, D.H.J.2    Nadal, P.3    Stockley, P.G.4    O'Sullivan, C.K.5
  • 43
    • 26644468823 scopus 로고    scopus 로고
    • Development of an automated in vitro selection protocol to obtain RNA-based aptamers: identification of a biostable substance P antagonist
    • [43] Eulberg, D., Buchner, K., Maasch, C., Klussmann, S., Development of an automated in vitro selection protocol to obtain RNA-based aptamers: identification of a biostable substance P antagonist. Nucleic Acids Res., 33, 2005.
    • (2005) Nucleic Acids Res. , vol.33
    • Eulberg, D.1    Buchner, K.2    Maasch, C.3    Klussmann, S.4
  • 45
    • 84901019991 scopus 로고    scopus 로고
    • Influenza A virus-specific aptamers screened by using an integrated microfluidic system
    • [45] Lai, H.-C.C., Wang, C.-H.H., Liou, T.-M.M., Lee, G.-B.B., Influenza A virus-specific aptamers screened by using an integrated microfluidic system. Lab Chip 14 (2014), 2002–2013.
    • (2014) Lab Chip , vol.14 , pp. 2002-2013
    • Lai, H.-C.C.1    Wang, C.-H.H.2    Liou, T.-M.M.3    Lee, G.-B.B.4
  • 46
    • 84919684366 scopus 로고    scopus 로고
    • Selection of aptamers specific for glycated hemoglobin and total hemoglobin using on-chip SELEX
    • [46] Lin, H.-I.I., Wu, C.-C.C., Yang, C.-H.H., Chang, K.-W.W., Lee, G.-B.B., Shiesh, S.-C.C., Selection of aptamers specific for glycated hemoglobin and total hemoglobin using on-chip SELEX. Lab Chip 15 (2015), 486–494.
    • (2015) Lab Chip , vol.15 , pp. 486-494
    • Lin, H.-I.I.1    Wu, C.-C.C.2    Yang, C.-H.H.3    Chang, K.-W.W.4    Lee, G.-B.B.5    Shiesh, S.-C.C.6
  • 47
    • 84870579370 scopus 로고    scopus 로고
    • Unique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targets
    • [47] Davies, D.R., Gelinas, A.D., Zhang, C., Rohloff, J.C., Carter, J.D., O'Connell, D., et al. Unique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targets. Proc. Natl. Acad. Sci. U.S.A. 109 (2012), 19971–19976.
    • (2012) Proc. Natl. Acad. Sci. U.S.A. , vol.109 , pp. 19971-19976
    • Davies, D.R.1    Gelinas, A.D.2    Zhang, C.3    Rohloff, J.C.4    Carter, J.D.5    O'Connell, D.6
  • 49
    • 84877338254 scopus 로고    scopus 로고
    • Generation of high-affinity DNA aptamers using an expanded genetic alphabet
    • [49] Kimoto, M., Yamashige, R., Matsunaga, K.-I., Yokoyama, S., Hirao, I., Generation of high-affinity DNA aptamers using an expanded genetic alphabet. Nat. Biotechnol. 31 (2013), 453–457.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 453-457
    • Kimoto, M.1    Yamashige, R.2    Matsunaga, K.-I.3    Yokoyama, S.4    Hirao, I.5
  • 50
    • 6944225455 scopus 로고    scopus 로고
    • Understanding nucleic acids using synthetic chemistry
    • [50] Benner, S.A., Understanding nucleic acids using synthetic chemistry. Acc. Chem. Res. 37 (2004), 784–797.
    • (2004) Acc. Chem. Res. , vol.37 , pp. 784-797
    • Benner, S.A.1
  • 51
    • 84930615976 scopus 로고    scopus 로고
    • Structural basis for a six nucleotide genetic alphabet
    • [51] Georgiadis, M.M., Singh, I., Kellett, W.F., Structural basis for a six nucleotide genetic alphabet. J. Am. Chem. Soc. 137 (2015), 6947–6955.
    • (2015) J. Am. Chem. Soc. , vol.137 , pp. 6947-6955
    • Georgiadis, M.M.1    Singh, I.2    Kellett, W.F.3
  • 53
    • 80053068450 scopus 로고    scopus 로고
    • Amplification, mutation, and sequencing of a six-letter synthetic genetic system
    • [53] Yang, Z., Chen, F., Alvarado, B.J., Benner, S.A., Amplification, mutation, and sequencing of a six-letter synthetic genetic system. J. Am. Chem. Soc. 133 (2011), 15105–15112.
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 15105-15112
    • Yang, Z.1    Chen, F.2    Alvarado, B.J.3    Benner, S.A.4
  • 54
    • 73349140532 scopus 로고    scopus 로고
    • Expanded genetic alphabets in the polymerase chain reaction
    • [54] Yang, Z., Chen, F., Chamberlin, S.G., Benner, S.A., Expanded genetic alphabets in the polymerase chain reaction. Angew. Chem. Int. Ed. 49 (2010), 177–180.
    • (2010) Angew. Chem. Int. Ed. , vol.49 , pp. 177-180
    • Yang, Z.1    Chen, F.2    Chamberlin, S.G.3    Benner, S.A.4
  • 55
    • 84930615169 scopus 로고    scopus 로고
    • Evolution of functional six-nucleotide DNA
    • [55] Zhang, L., Yang, Z., Sefah, K., Bradley, K.M., Evolution of functional six-nucleotide DNA. J. Am. Soc. 137 (2015), 6734–6737.
    • (2015) J. Am. Soc. , vol.137 , pp. 6734-6737
    • Zhang, L.1    Yang, Z.2    Sefah, K.3    Bradley, K.M.4
  • 56
    • 84875611438 scopus 로고    scopus 로고
    • Cell-based selection provides novel molecular probes for cancer stem cells
    • [56] Sefah, K., Bae, K.-M.M., Phillips, J.A., Siemann, D.W., Su, Z., McClellan, S., et al. Cell-based selection provides novel molecular probes for cancer stem cells. Int. J. Cancer 132 (2013), 2578–2588.
    • (2013) Int. J. Cancer , vol.132 , pp. 2578-2588
    • Sefah, K.1    Bae, K.-M.M.2    Phillips, J.A.3    Siemann, D.W.4    Su, Z.5    McClellan, S.6
  • 57
    • 84555186714 scopus 로고    scopus 로고
    • A novel aptamer developed for breast cancer cell internalization
    • [57] Zhang, K., Sefah, K., Tang, L., Zhao, Z., Zhu, G., Ye, M., et al. A novel aptamer developed for breast cancer cell internalization. ChemMedChem 7 (2012), 79–84.
    • (2012) ChemMedChem , vol.7 , pp. 79-84
    • Zhang, K.1    Sefah, K.2    Tang, L.3    Zhao, Z.4    Zhu, G.5    Ye, M.6
  • 58
    • 14244263708 scopus 로고    scopus 로고
    • Nonequilibrium capillary electrophoresis of equilibrium mixtures: a universal tool for development of aptamers
    • [58] Berezovski, M., Drabovich, A., Krylova, S.M., Musheev, M., Okhonin, V., Petrov, A., et al. Nonequilibrium capillary electrophoresis of equilibrium mixtures: a universal tool for development of aptamers. J. Am. Chem. Soc. 127 (2005), 3165–3171.
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 3165-3171
    • Berezovski, M.1    Drabovich, A.2    Krylova, S.M.3    Musheev, M.4    Okhonin, V.5    Petrov, A.6
  • 59
    • 84866388277 scopus 로고    scopus 로고
    • DNase-mediated single-cycle selection of aptamers for proteins blotted on a membrane
    • [59] Liu, Y., Wang, C., Li, F., Shen, S., Tyrrell, D.L., Le, X.C., et al. DNase-mediated single-cycle selection of aptamers for proteins blotted on a membrane. Anal. Chem. 84 (2012), 7603–7606.
    • (2012) Anal. Chem. , vol.84 , pp. 7603-7606
    • Liu, Y.1    Wang, C.2    Li, F.3    Shen, S.4    Tyrrell, D.L.5    Le, X.C.6
  • 60
    • 23844475351 scopus 로고    scopus 로고
    • Selection of smart aptamers by equilibrium capillary electrophoresis of equilibrium mixtures (ECEEM)
    • [60] Drabovich, A., Berezovski, M., Krylov, S.N., Selection of smart aptamers by equilibrium capillary electrophoresis of equilibrium mixtures (ECEEM). J. Am. Chem. Soc. 127 (2005), 11224–11225.
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 11224-11225
    • Drabovich, A.1    Berezovski, M.2    Krylov, S.N.3
  • 61
    • 0347760143 scopus 로고    scopus 로고
    • In vitro evolution of functional DNA using capillary electrophoresis
    • [61] Mendonsa, S.D., Bowser, M.T., In vitro evolution of functional DNA using capillary electrophoresis. J. Am. Chem. Soc. 126 (2004), 20–21.
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 20-21
    • Mendonsa, S.D.1    Bowser, M.T.2
  • 62
    • 4544303216 scopus 로고    scopus 로고
    • In vitro selection of high-affinity DNA ligands for human IgE using capillary electrophoresis
    • [62] Mendonsa, S.D., Bowser, M.T., In vitro selection of high-affinity DNA ligands for human IgE using capillary electrophoresis. Anal. Chem. 76 (2004), 5387–5392.
    • (2004) Anal. Chem. , vol.76 , pp. 5387-5392
    • Mendonsa, S.D.1    Bowser, M.T.2
  • 63
    • 21644454857 scopus 로고    scopus 로고
    • In vitro selection of aptamers with affinity for neuropeptide Y using capillary electrophoresis
    • [63] Mendonsa, S.D., Bowser, M.T., In vitro selection of aptamers with affinity for neuropeptide Y using capillary electrophoresis. J. Am. Chem. Soc. 127 (2005), 9382–9383.
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 9382-9383
    • Mendonsa, S.D.1    Bowser, M.T.2
  • 64
    • 0018199224 scopus 로고
    • DNAse footprinting: a simple method for the detection of protein-DNA binding specificity
    • [64] Galas, D.J., Schmitz, A., DNAse footprinting: a simple method for the detection of protein-DNA binding specificity. Nucleic Acids Res. 5 (1978), 3157–3170.
    • (1978) Nucleic Acids Res. , vol.5 , pp. 3157-3170
    • Galas, D.J.1    Schmitz, A.2
  • 65
    • 0026737758 scopus 로고
    • A coupled Southwestern–DNase I footprinting assay
    • [65] Smith, S.E., Papavassiliou, A.G., A coupled Southwestern–DNase I footprinting assay. Nucleic Acids Res. 20 (1992), 5239–5240.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5239-5240
    • Smith, S.E.1    Papavassiliou, A.G.2
  • 68
    • 0028191743 scopus 로고
    • All you wanted to know about SELEX
    • [68] Klug, S.J., Famulok, M., All you wanted to know about SELEX. Mol. Biol. Rep. 20 (1994), 97–107.
    • (1994) Mol. Biol. Rep. , vol.20 , pp. 97-107
    • Klug, S.J.1    Famulok, M.2
  • 69
    • 0026649231 scopus 로고
    • Directed evolution of an RNA enzyme
    • [69] Beaudry, A.A., Joyce, G.F., Directed evolution of an RNA enzyme. Science, 1992.
    • (1992) Science
    • Beaudry, A.A.1    Joyce, G.F.2
  • 70
    • 0027525989 scopus 로고
    • Evolution in vitro of an RNA enzyme with altered metal dependence
    • [70] Lehman, N., Joyce, G.F., Evolution in vitro of an RNA enzyme with altered metal dependence. Nature Publishing Group, 1993.
    • (1993) Nature Publishing Group
    • Lehman, N.1    Joyce, G.F.2
  • 71
    • 0028011717 scopus 로고
    • Molecular recognition of amino acids by RNA-aptamers: an L-citrulline binding RNA motif and its evolution into an L-arginine binder
    • [71] Famulok, M., Molecular recognition of amino acids by RNA-aptamers: an L-citrulline binding RNA motif and its evolution into an L-arginine binder. J. Am. Chem. Soc., 1994.
    • (1994) J. Am. Chem. Soc.
    • Famulok, M.1
  • 72
    • 0037870470 scopus 로고    scopus 로고
    • Assemblage of signaling DNA enzymes with intriguing metal-ion specificities and pH dependences
    • [72] Liu, Z., Mei, S.H., Brennan, J.D., Li, Y., Assemblage of signaling DNA enzymes with intriguing metal-ion specificities and pH dependences. J. Am. Chem. Soc. 125 (2003), 7539–7545.
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 7539-7545
    • Liu, Z.1    Mei, S.H.2    Brennan, J.D.3    Li, Y.4
  • 73
    • 80051581780 scopus 로고    scopus 로고
    • Small-molecule-dependent split aptamer ligation
    • [73] Sharma, A.K., Heemstra, J.M., Small-molecule-dependent split aptamer ligation. J. Am. Chem. Soc. 133 (2011), 12426–12429.
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 12426-12429
    • Sharma, A.K.1    Heemstra, J.M.2
  • 74
    • 33644962875 scopus 로고    scopus 로고
    • Revitalization of six abandoned catalytic DNA species reveals a common three-way junction framework and diverse catalytic cores
    • [74] Chiuman, W., Li, Y., Revitalization of six abandoned catalytic DNA species reveals a common three-way junction framework and diverse catalytic cores. J. Mol. Biol. 357 (2006), 748–754.
    • (2006) J. Mol. Biol. , vol.357 , pp. 748-754
    • Chiuman, W.1    Li, Y.2
  • 78
    • 84959362862 scopus 로고    scopus 로고
    • In silico selection of an aptamer to estrogen receptor alpha using computational docking employing estrogen response elements as aptamer-alike molecules
    • [78] Ahirwar, R., Nahar, S., Aggarwal, S., Ramachandran, S., Maiti, S., Nahar, P., In silico selection of an aptamer to estrogen receptor alpha using computational docking employing estrogen response elements as aptamer-alike molecules. Sci. Rep., 6, 2016, 21285.
    • (2016) Sci. Rep. , vol.6 , pp. 21285
    • Ahirwar, R.1    Nahar, S.2    Aggarwal, S.3    Ramachandran, S.4    Maiti, S.5    Nahar, P.6
  • 79
  • 80
    • 77951643739 scopus 로고    scopus 로고
    • Atomic accuracy in predicting and designing noncanonical RNA structure
    • [80] Das, R., Karanicolas, J., Baker, D., Atomic accuracy in predicting and designing noncanonical RNA structure. Nat. Methods 7 (2010), 291–294.
    • (2010) Nat. Methods , vol.7 , pp. 291-294
    • Das, R.1    Karanicolas, J.2    Baker, D.3
  • 81
    • 3843057001 scopus 로고    scopus 로고
    • Validation of automated docking programs for docking and database screening against RNA drug targets
    • [81] Detering, C., Varani, G., Validation of automated docking programs for docking and database screening against RNA drug targets. J. Med. Chem., 2004.
    • (2004) J. Med. Chem.
    • Detering, C.1    Varani, G.2
  • 82
    • 84863528670 scopus 로고    scopus 로고
    • Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers
    • [82] Hoinka, J., Zotenko, E., Friedman, A., Sauna, Z.E., Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers. Bioinformatics 28 (2012), 1215–1223.
    • (2012) Bioinformatics , vol.28 , pp. 1215-1223
    • Hoinka, J.1    Zotenko, E.2    Friedman, A.3    Sauna, Z.E.4
  • 83
    • 84907513604 scopus 로고    scopus 로고
    • MPBind: a Meta-motif-based statistical framework and pipeline to Predict Binding potential of SELEX-derived aptamers
    • [83] Jiang, P., Meyer, S., Hou, Z., Propson, N.E., Soh, H.T., MPBind: a Meta-motif-based statistical framework and pipeline to Predict Binding potential of SELEX-derived aptamers. Bioinformatics, 2014.
    • (2014) Bioinformatics
    • Jiang, P.1    Meyer, S.2    Hou, Z.3    Propson, N.E.4    Soh, H.T.5
  • 84
    • 77958470166 scopus 로고    scopus 로고
    • R3D Align: global pairwise alignment of RNA 3D structures using local superpositions
    • [84] Rahrig, R.R., Leontis, N.B., Zirbel, C.L., R3D Align: global pairwise alignment of RNA 3D structures using local superpositions. Bioinformatics, 2010.
    • (2010) Bioinformatics
    • Rahrig, R.R.1    Leontis, N.B.2    Zirbel, C.L.3
  • 85
    • 36448954303 scopus 로고    scopus 로고
    • FR3D: finding local and composite recurrent structural motifs in RNA 3D structures
    • [85] Sarver, M., Zirbel, C.L., Stombaugh, J., Mokdad, A., FR3D: finding local and composite recurrent structural motifs in RNA 3D structures. J. Math. Biol. 56 (2008), 215–252.
    • (2008) J. Math. Biol. , vol.56 , pp. 215-252
    • Sarver, M.1    Zirbel, C.L.2    Stombaugh, J.3    Mokdad, A.4
  • 86
    • 40749120187 scopus 로고    scopus 로고
    • DOVIS: an implementation for high-throughput virtual screening using AutoDock
    • [86] Zhang, S., Kumar, K., Jiang, X., DOVIS: an implementation for high-throughput virtual screening using AutoDock. BMC Bioinformatics, 2008.
    • (2008) BMC Bioinformatics
    • Zhang, S.1    Kumar, K.2    Jiang, X.3


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