메뉴 건너뛰기




Volumn 32, Issue DATABASE ISS., 2004, Pages

Aptamer database

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; RIBOZYME;

EID: 0346495950     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (179)

References (39)
  • 1
    • 0036771047 scopus 로고    scopus 로고
    • Aptamers and aptazymes: Accelerating small molecule drug discovery
    • Burgstaller,P., Jenne,A. and Blind,M. (2002) Aptamers and aptazymes: accelerating small molecule drug discovery. Curr. Opin. Drug Discov. Dev., 5, 690-700.
    • (2002) Curr. Opin. Drug Discov. Dev. , vol.5 , pp. 690-700
    • Burgstaller, P.1    Jenne, A.2    Blind, M.3
  • 2
    • 0005620475 scopus 로고    scopus 로고
    • Aptamers as therapeutic and diagnostic agents
    • Brody,E.N. and Gold,L. (2000) Aptamers as therapeutic and diagnostic agents. J. Biotechnol., 74, 5-13.
    • (2000) J. Biotechnol. , vol.74 , pp. 5-13
    • Brody, E.N.1    Gold, L.2
  • 3
    • 0031151974 scopus 로고    scopus 로고
    • The joys of in vitro selection: Chemically dressing oligonucleotides to satiate protein targets
    • Eaton,B.E. (1997) The joys of in vitro selection: chemically dressing oligonucleotides to satiate protein targets. Curr. Opin. Chem. Biol., 1, 10-16.
    • (1997) Curr. Opin. Chem. Biol. , vol.1 , pp. 10-16
    • Eaton, B.E.1
  • 4
    • 0033027625 scopus 로고    scopus 로고
    • Aptamers as tools in molecular biology and immunology
    • Famulok,M. and Mayer,G. (1999) Aptamers as tools in molecular biology and immunology. Curr. Top. Microbiol. Immunol., 243, 123-136.
    • (1999) Curr. Top. Microbiol. Immunol. , vol.243 , pp. 123-136
    • Famulok, M.1    Mayer, G.2
  • 5
  • 6
    • 0028191743 scopus 로고
    • All you wanted to know about SELEX
    • Klug,S.J. and Famulok,M. (1994) All you wanted to know about SELEX. Mol. Biol. Rep., 20, 97-107.
    • (1994) Mol. Biol. Rep. , vol.20 , pp. 97-107
    • Klug, S.J.1    Famulok, M.2
  • 7
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington,A.D. and Szostak,J.W. (1990) In vitro selection of RNA molecules that bind specific ligands. Nature, 346, 818-822.
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 8
    • 0032706595 scopus 로고    scopus 로고
    • A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis
    • Illangasekare,M. and Yarus,M. (1999) A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis. RNA, 5, 1482-1489.
    • (1999) RNA , vol.5 , pp. 1482-1489
    • Illangasekare, M.1    Yarus, M.2
  • 9
    • 0033152567 scopus 로고    scopus 로고
    • Self-capping RNA catalysts derived from selection-amplification
    • Huang,F., Yang,Z. and Yarus,M. (1999) Self-capping RNA catalysts derived from selection-amplification. Biol. Bull., 196, 320-321.
    • (1999) Biol. Bull. , vol.196 , pp. 320-321
    • Huang, F.1    Yang, Z.2    Yarus, M.3
  • 10
    • 0032541654 scopus 로고    scopus 로고
    • RNA-catalysed nucleotide synthesis
    • Unrau,P.J. and Bartel,D.P. (1998) RNA-catalysed nucleotide synthesis. Nature, 395, 260-263.
    • (1998) Nature , vol.395 , pp. 260-263
    • Unrau, P.J.1    Bartel, D.P.2
  • 11
    • 0029147392 scopus 로고
    • Structurally complex and highly active RNA ligases derived from random RNA sequences
    • Ekland,E.H., Szostak,J.W. and Bartel,D.P. (1995) Structurally complex and highly active RNA ligases derived from random RNA sequences. Science, 269, 364-370.
    • (1995) Science , vol.269 , pp. 364-370
    • Ekland, E.H.1    Szostak, J.W.2    Bartel, D.P.3
  • 12
    • 0037099536 scopus 로고    scopus 로고
    • Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen
    • Lupold,S.E., Hicke,B.J., Lin,Y. and Coffey,D.S. (2002) Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen. Cancer Res., 62, 4029-4033.
    • (2002) Cancer Res. , vol.62 , pp. 4029-4033
    • Lupold, S.E.1    Hicke, B.J.2    Lin, Y.3    Coffey, D.S.4
  • 13
    • 0036665592 scopus 로고    scopus 로고
    • Optimizing aptamer activity for gene therapy applications using expression cassette SELEX
    • Martell,R.E., Nevins,J.R. and Sullenger,B.A. (2002) Optimizing aptamer activity for gene therapy applications using expression cassette SELEX. Mol. Ther., 6, 30-34.
    • (2002) Mol. Ther. , vol.6 , pp. 30-34
    • Martell, R.E.1    Nevins, J.R.2    Sullenger, B.A.3
  • 14
    • 0032860385 scopus 로고    scopus 로고
    • Aptamers: An emerging class of molecules that rival antibodies in diagnostics
    • Jayasena,S.D. (1999) Aptamers: an emerging class of molecules that rival antibodies in diagnostics. Clin. Chem., 45, 1628-1650.
    • (1999) Clin. Chem. , vol.45 , pp. 1628-1650
    • Jayasena, S.D.1
  • 15
    • 0036022523 scopus 로고    scopus 로고
    • High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites
    • Roulet,E., Busso,S., Camargo,A.A., Simpson,A.J., Mermod,N. and Bucher,P. (2002) High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites. Nat. Biotechnol., 20, 831-835.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 831-835
    • Roulet, E.1    Busso, S.2    Camargo, A.A.3    Simpson, A.J.4    Mermod, N.5    Bucher, P.6
  • 16
    • 0026774239 scopus 로고
    • Selection of optimal κ B/Rel DNA-binding motifs: Interaction of both subunits of NF-κB with DNA is required for transcriptional activation
    • Kunsch,C., Ruben,S.M. and Rosen,C.A. (1992) Selection of optimal κ B/Rel DNA-binding motifs: interaction of both subunits of NF-κB with DNA is required for transcriptional activation. Mol. Cell. Biol., 12, 4412-4421.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 4412-4421
    • Kunsch, C.1    Ruben, S.M.2    Rosen, C.A.3
  • 17
    • 0033537675 scopus 로고    scopus 로고
    • Selection and characterization of an RNA decoy for transcription factor NF-κB
    • Lebruska,L.L. and Maher,L.J.,3rd (1999) Selection and characterization of an RNA decoy for transcription factor NF-κB. Biochemistry, 38, 3168-3174.
    • (1999) Biochemistry , vol.38 , pp. 3168-3174
    • Lebruska, L.L.1    Maher III, L.J.2
  • 18
    • 0027528993 scopus 로고
    • CASTing for multicomponent DNA-binding complexes
    • Wright,W.E. and Funk,W.D. (1993) CASTing for multicomponent DNA-binding complexes. Trends Biochem. Sci., 18, 77-80.
    • (1993) Trends Biochem. Sci. , vol.18 , pp. 77-80
    • Wright, W.E.1    Funk, W.D.2
  • 19
    • 0035998745 scopus 로고    scopus 로고
    • SELEX: A database on in vitro selected oligomers adapted for recognizing natural sites and for analyzing both SNPs and site-directed mutagenesis data
    • Ponomarenko,J.V., Orlova,G.V., Frolov,A.S., Gelfand,M.S. and Ponomarenko,M.P. (2002) SELEX: a database on in vitro selected oligomers adapted for recognizing natural sites and for analyzing both SNPs and site-directed mutagenesis data. Nucleic Acids Res., 30, 195-199.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 195-199
    • Ponomarenko, J.V.1    Orlova, G.V.2    Frolov, A.S.3    Gelfand, M.S.4    Ponomarenko, M.P.5
  • 23
    • 0037206833 scopus 로고    scopus 로고
    • Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
    • Winkler,W., Nahvi,A. and Breaker,R.R. (2002) Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature, 419, 952-956.
    • (2002) Nature , vol.419 , pp. 952-956
    • Winkler, W.1    Nahvi, A.2    Breaker, R.R.3
  • 24
    • 0026575221 scopus 로고
    • Selection of single-stranded DNA molecules that bind and inhibit human thrombin
    • Bock,L.C., Griffin,L.C., Latham,J.A., Vermaas,E.H. and Toole,J.J. (1992) Selection of single-stranded DNA molecules that bind and inhibit human thrombin. Nature, 355, 564-566.
    • (1992) Nature , vol.355 , pp. 564-566
    • Bock, L.C.1    Griffin, L.C.2    Latham, J.A.3    Vermaas, E.H.4    Toole, J.J.5
  • 25
    • 0033231395 scopus 로고    scopus 로고
    • What's new in the library? What's new in GenBank? Let PubCrawler tell you
    • Hokamp,K. and Wolfe,K. (1999) What's new in the library? What's new in GenBank? Let PubCrawler tell you. Trends Genet., 15, 471-472.
    • (1999) Trends Genet. , vol.15 , pp. 471-472
    • Hokamp, K.1    Wolfe, K.2
  • 26
    • 0036851309 scopus 로고    scopus 로고
    • Genome-wide co-occurrence of promoter elements reveals a cis-regulatory cassette of rRNA transcription motifs in Saccharomyces cerevisiae
    • Sudarsanam,P., Pilpel,Y. and Church,G.M. (2002) Genome-wide co-occurrence of promoter elements reveals a cis-regulatory cassette of rRNA transcription motifs in Saccharomyces cerevisiae. Genome Res., 12, 1723-1731.
    • (2002) Genome Res. , vol.12 , pp. 1723-1731
    • Sudarsanam, P.1    Pilpel, Y.2    Church, G.M.3
  • 27
    • 0034628901 scopus 로고    scopus 로고
    • Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae
    • Hughes,J.D., Estep,P.W., Tavazoie,S. and Church,G.M. (2000) Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae. J. Mol. Biol., 296, 1205-1214.
    • (2000) J. Mol. Biol. , vol.296 , pp. 1205-1214
    • Hughes, J.D.1    Estep, P.W.2    Tavazoie, S.3    Church, G.M.4
  • 28
    • 0037188546 scopus 로고    scopus 로고
    • Noncoding RNA genes identified in AT-rich hyperthermophiles
    • Klein,R.J., Misulovin,Z. and Eddy,S.R. (2002) Noncoding RNA genes identified in AT-rich hyperthermophiles. Proc. Natl Acad. Sci. USA, 99, 7542-7547.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 7542-7547
    • Klein, R.J.1    Misulovin, Z.2    Eddy, S.R.3
  • 29
    • 0034698298 scopus 로고    scopus 로고
    • One sequence, two ribozymes: Implications for the emergence of new ribozyme folds
    • Schultes,E.A. and Bartel,D.P. (2000) One sequence, two ribozymes: implications for the emergence of new ribozyme folds. Science, 289, 448-452.
    • (2000) Science , vol.289 , pp. 448-452
    • Schultes, E.A.1    Bartel, D.P.2
  • 31
    • 0019876473 scopus 로고
    • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
    • Zuker,M. and Stiegler,P. (1981) Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res., 9, 133-148.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 133-148
    • Zuker, M.1    Stiegler, P.2
  • 32
    • 0035283171 scopus 로고    scopus 로고
    • Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond
    • Ding,Y. and Lawrence,C.E. (2001) Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond. Nucleic Acids Res., 29, 1034-1046.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 1034-1046
    • Ding, Y.1    Lawrence, C.E.2
  • 33
    • 0025264854 scopus 로고
    • The equilibrium partition function and base pair binding probabilities for RNA secondary structure
    • McCaskill,J.S. (1990) The equilibrium partition function and base pair binding probabilities for RNA secondary structure. Biopolymers, 29, 1105-1119.
    • (1990) Biopolymers , vol.29 , pp. 1105-1119
    • McCaskill, J.S.1
  • 34
    • 0029121733 scopus 로고
    • Exceptionally stable nucleic acid hairpins
    • Varani,G. (1995) Exceptionally stable nucleic acid hairpins. Annu. Rev. Biophys. Biomol. Struct., 24, 379-404.
    • (1995) Annu. Rev. Biophys. Biomol. Struct. , vol.24 , pp. 379-404
    • Varani, G.1
  • 35
    • 0021099838 scopus 로고
    • Rho-dependent termination of transcription. I. Identification and characterization of ternimation sites for transcription from the bacteriophage lambda PR promoter
    • Morgan,W.D., Bear,D.G. and von Hippel,P.H. (1983) Rho-dependent termination of transcription. I. Identification and characterization of ternimation sites for transcription from the bacteriophage lambda PR promoter. J. Biol. Chem., 258, 9553-9564.
    • (1983) J. Biol. Chem. , vol.258 , pp. 9553-9564
    • Morgan, W.D.1    Bear, D.G.2    von Hippel, P.H.3
  • 36
    • 0022431528 scopus 로고
    • RNA sequence and secondary structure requirements for rho-dependent transcription termination
    • Morgan,W.D., Bear,D.G., Litchman,B.L. and von Hippel,P.H. (1985) RNA sequence and secondary structure requirements for rho-dependent transcription termination. Nucleic Acids Res., 13, 3739-3754.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 3739-3754
    • Morgan, W.D.1    Bear, D.G.2    Litchman, B.L.3    von Hippel, P.H.4
  • 37
    • 0036297661 scopus 로고    scopus 로고
    • RNA simulations: Probing hairpin unfolding and the dynamics of a GNRA tetraloop
    • Sorin,E.J., Engelhardt,M.A., Herschlag,D. and Pande,V.S. (2002) RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop. J. Mol. Biol., 317, 493-506.
    • (2002) J. Mol. Biol. , vol.317 , pp. 493-506
    • Sorin, E.J.1    Engelhardt, M.A.2    Herschlag, D.3    Pande, V.S.4
  • 38
    • 0035700275 scopus 로고    scopus 로고
    • Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop
    • Li,W., Ma,B. and Shapiro,B. (2001), Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop. J. Biomol. Struct. Dyn., 19, 381-396.
    • (2001) J. Biomol. Struct. Dyn. , vol.19 , pp. 381-396
    • Li, W.1    Ma, B.2    Shapiro, B.3
  • 39
    • 0034646572 scopus 로고    scopus 로고
    • Experimental and computational studies of the G[UUCG]C RNA tetraloop
    • Williams,D.J. and Hall,K.B. (2000) Experimental and computational studies of the G[UUCG]C RNA tetraloop. J. Mol. Biol., 297, 1045-1061.
    • (2000) J. Mol. Biol. , vol.297 , pp. 1045-1061
    • Williams, D.J.1    Hall, K.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.