Automated RNA selection

Biotechnology Progress

Volumn 14, Issue 6, 1998, Pages 845-850

  Cox, J Colin ^a   Rudolph, Peter ^a   Ellington, Andrew D ^b  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^b University of Texas at Austin   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; RNA;

BIOTECHNOLOGY; CELLS; MOLECULAR STRUCTURE; ROBOT APPLICATIONS;

LIGANDS; MOLECULAR BIOLOGY;

RNA;

BASE COMPOSITION; BASE SEQUENCE; BIOTECHNOLOGY; DNA PRIMERS; MOLECULAR BIOLOGY; MOLECULAR SEQUENCE DATA; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA; ROBOTICS; SOFTWARE; TRANSCRIPTION, GENETIC;

EID: 0032210799     PISSN: 87567938     EISSN: None     Source Type: Journal    
DOI: 10.1021/bp980097h     Document Type: Article

References (17)

1. Boland, E. J,; Pillai, A., Odom, M. W.; Jagadeeswaran, P. Automation of the Maxam - Gilbert chemical sequencing reactions. Biotechniques 1994, 16, 1088-1092; 1094-1095.
2. Civitello, A. B.; Richards, Gibbs, R. A. A simple protocol for the automation of DNA cycle sequencing reactions and polymerase chain reactions and polymerase chain reaction. DNA Sequence 1992, 3, 17-23.
3. Wang, D. G.; Fan, J. B.; Siao, C, J.; Berno, A.; Young, et al. Large-scale identification, mapping, and genotyping of Single nuoleptide polymorphisms in the human genome. Science 1998, 280, 1077-1082.
4. Meier-Ewert, S.; Maier, E.; Ahmadi, A.; Curtis, J.; Lehrach, H. An automated approach to generating expressed sequence catalogues. Nature 1993, 361, 375-376.
5. Saborio, J. L.; Galvin, N. M.; Lee, M.; Cahlik, J. A.; Reddy, M. P. A fully automated method for rapid purification of plasmid DNA using the Biomek 2000 and Qiagen's "QIAwell 96 Ultra" kit; Beckman Coulter, Inc., A-1849A; Beckman: Fullerton, CA, 1998.
6. Gonzalez, D.; Sasaki, G.; Threadgill, G. High-throughput purification of plasmid DNA using the 96-Plasmid Purification Kit on the Biomek 2000 Laboratory Automated Workstation Beckman Coulter, Inc., A-1826A; Beckman: Fullerton, CA, 1996.
7. Macas, J.; Nouzova, M.; Galbraith, D. W. Adapting the Biomek 2000 laboratory automation workstation for printing DNA microarrays. Biotechniques 1998, 25, 106-110.
8. Gold, L.; Polisky, B.; Uhlenbeck, O.; Yarus, M. Diversity of oligonucleotide functions. Annu. Rev. Biochem. 1995, 64, 763-797.
9. Bell, S. D.; Denu, J. M.; Dixon, J. E.; Ellington, A. D. RNA molecules that bind to and inhibit the active site of a tyrosine phosphatase. J. Biol. Chem. 1998, 273, 14309-14314.
10. Clackson, T.; D. Güssow, D.; Jones, P. T. In PCR 1; Rickwood, D., Hames, B. D., Eds.; Oxford University Press: Oxford, 1991; pp 210-212.
11. Crameri A.; Stemmer, W. P. 10(20)-fold aptamer library amplification without gel purification. Nucleic Acids Res. 1993, 21, 4410.
12. Cunningham, P. R.; Weitzmann, C. J.; Ofengand, J. SP6 RNA polymerase stutters when initiating from an AAA... sequence. Nucleic Acids Res. 1991, 19, 4669-4673.
13. Macdonald, L. E.; Zhou, Y.; McAllister, W.T. Termination and slippaage by bacteriophage T7 RNA polymerase. J. Mol. Biol. 1993, 232, 1030-1047.
14. Guatelli, J. C.; Whitfield, K. M.; Kwoh, D. Y.; Barringer, K. J.; Richman, D. D. et al. Isothermal, in vitri amplification of nucleic acids by a multienzyme reaction modeled after retroviral replication. Proc. Natl. Acad. Sci U.S.A. 1990, 87, 1874-1878.
15. Wright, M. C.; Joyce, G. F. Continuous in vitro evolution of catalytic function. Science 1997, 276, 614-617.
16. Bull, J. J.; Pease, C. M. Why is the polymefase chain reaction resistant to in vitro evolution? J. Mol. Evol. 1905, 41, 1160-1164.
17. Schober, A.; Walter, N. G.; Tangen, U.; Strunk, G.; Ederhof, T.; et al. Multichannel PCR and serial transfer machine as a future tool in evolutionary biotechnology. Biotechniques 1995; 18, 652-661.