-
1
-
-
0001383199
-
Analysis of gametophytic development in the moss, Physcomitrella patens, using auxin and cytokinin resistant mutants
-
Ashton, N. W., N. H. Grimsley, and D. J. Cove, 1979 Analysis of gametophytic development in the moss, Physcomitrella patens, using auxin and cytokinin resistant mutants. Planta 144: 427-435.
-
(1979)
Planta
, vol.144
, pp. 427-435
-
-
Ashton, N.W.1
Grimsley, N.H.2
Cove, D.J.3
-
2
-
-
0033949569
-
The bryophyte Physcomitrella patens replicates extrachromosomal transgenic elements
-
Ashton, N. W., C. E. M. Champagne, T. Weiler, and L. K. Verkoczy, 2000 The bryophyte Physcomitrella patens replicates extrachromosomal transgenic elements. New Phytol. 146: 391-402.
-
(2000)
New Phytol
, vol.146
, pp. 391-402
-
-
Ashton, N.W.1
Champagne, C.E.M.2
Weiler, T.3
Verkoczy, L.K.4
-
3
-
-
84903516238
-
Microhomology-based choice of Cas9 nuclease target sites
-
Bae, S., J. Kweon, H. S. Kim, and J.-S. Kim, 2014 Microhomology-based choice of Cas9 nuclease target sites. Nat. Methods 11: 705-706.
-
(2014)
Nat. Methods
, vol.11
, pp. 705-706
-
-
Bae, S.1
Kweon, J.2
Kim, H.S.3
Kim, J.-S.4
-
4
-
-
20144383372
-
An RNAi system in Physcomitrella patens with an internal marker for silencing allows for rapid identification of loss of function phenotypes
-
Bezanilla, M., P.-F. Perroud, A. Pan, P. Klueh, and R. S. Quatrano, 2005 An RNAi system in Physcomitrella patens with an internal marker for silencing allows for rapid identification of loss of function phenotypes. Plant Biol. (Stuttg) 7: 251-257.
-
(2005)
Plant Biol. (Stuttg)
, vol.7
, pp. 251-257
-
-
Bezanilla, M.1
Perroud, P.-F.2
Pan, A.3
Klueh, P.4
Quatrano, R.S.5
-
5
-
-
84937868093
-
A family of ROP proteins that suppresses actin dynamics, and is essential for polarized growth and cell adhesion
-
Burkart, G. M., T. I. Baskin, and M. Bezanilla, 2015 A family of ROP proteins that suppresses actin dynamics, and is essential for polarized growth and cell adhesion. J. Cell Sci. 128: 2553-2564.
-
(2015)
J. Cell Sci
, vol.128
, pp. 2553-2564
-
-
Burkart, G.M.1
Baskin, T.I.2
Bezanilla, M.3
-
6
-
-
84977529301
-
Insert, remove or replace: a highly advanced genome editing system using CRISPR/Cas9
-
Ceasar, S. A., V. Rajan, S. V. Prykhozhij, J. N. Berman, and S. Ignacimuthu, 2016 Insert, remove or replace: a highly advanced genome editing system using CRISPR/Cas9. Biochim. Biophys. Acta 1863: 2333-2344.
-
(2016)
Biochim. Biophys. Acta
, vol.1863
, pp. 2333-2344
-
-
Ceasar, S.A.1
Rajan, V.2
Prykhozhij, S.V.3
Berman, J.N.4
Ignacimuthu, S.5
-
7
-
-
84979022161
-
CRISPR-Cas9 mediated efficient directed mutagenesis and RAD51-dependent and-independent gene targeting in the moss Physcomitrella patens
-
Collonnier, C., A. Epert, K. Mara, F. Maclot, A. Guyon-Debast et al., 2016 CRISPR-Cas9 mediated efficient directed mutagenesis and RAD51-dependent and-independent gene targeting in the moss Physcomitrella patens. Plant Biotechnol. J. DOI: 10.1111/pbi.12596.
-
(2016)
Plant Biotechnol. J
-
-
Collonnier, C.1
Epert, A.2
Mara, K.3
Maclot, F.4
Guyon-Debast, A.5
-
8
-
-
84896924524
-
Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis
-
Feng, Z., Y. Mao, N. Xu, B. Zhang, P. Wei et al., 2014 Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proc. Natl. Acad. Sci. USA 111: 4632-4637.
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 4632-4637
-
-
Feng, Z.1
Mao, Y.2
Xu, N.3
Zhang, B.4
Wei, P.5
-
9
-
-
84969195094
-
Nucleosomes impede Cas9 access to DNA in vivo and in vitro
-
Horlbeck, M. A., L. B. Witkowsky, B. Guglielmi, J. M. Replogle, L. A. Gilbert et al., 2016 Nucleosomes impede Cas9 access to DNA in vivo and in vitro. eLife 5:e12677.
-
(2016)
eLife
, vol.5
-
-
Horlbeck, M.A.1
Witkowsky, L.B.2
Guglielmi, B.3
Replogle, J.M.4
Gilbert, L.A.5
-
10
-
-
13244299112
-
Quantitative promoter analysis in Physcomitrella patens: a set of plant vectors activating gene expression within three orders of magnitude
-
Horstmann, V., C. M. Huether, W. Jost, R. Reski, and E. L. Decker, 2004 Quantitative promoter analysis in Physcomitrella patens: a set of plant vectors activating gene expression within three orders of magnitude. BMC Biotechnol. 4: 13.
-
(2004)
BMC Biotechnol
, vol.4
, pp. 13
-
-
Horstmann, V.1
Huether, C.M.2
Jost, W.3
Reski, R.4
Decker, E.L.5
-
11
-
-
84884165315
-
DNA targeting specificity of RNA-guided Cas9 nucleases
-
Hsu, P. D., D. A. Scott, J. A. Weinstein et al., 2013 DNA targeting specificity of RNA-guided Cas9 nucleases. Nat. Biotechnol. 31: 827-832.
-
(2013)
Nat. Biotechnol
, vol.31
, pp. 827-832
-
-
Hsu, P.D.1
Scott, D.A.2
Weinstein, J.A.3
-
12
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek, M., K. Chylinski, I. Fonfara, M. Hauer, J. A. Doudna et al., 2012 A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337: 816-821.
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
-
13
-
-
84903138336
-
CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequences
-
Lin, Y., T. J. Cradick, M. T. Brown et al., 2014 CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequences. Nucleic Acids Res. 42: 7473-7485.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 7473-7485
-
-
Lin, Y.1
Cradick, T.J.2
Brown, M.T.3
-
14
-
-
84961191883
-
Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens
-
Lopez-Obando, M., C. E. Conn, B. Hoffmann, R. Bythell-Douglas, D. C. Nelson et al., 2016 Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens. Planta 243: 1441-1453.
-
(2016)
Planta
, vol.243
, pp. 1441-1453
-
-
Lopez-Obando, M.1
Conn, C.E.2
Hoffmann, B.3
Bythell-Douglas, R.4
Nelson, D.C.5
-
15
-
-
85009143841
-
CRISPR/Cas9 platforms for genome editing in plants: developments and applications
-
Ma, X., Q. Zhu, Y. Chen, and Y.-G. Liu, 2016 CRISPR/Cas9 platforms for genome editing in plants: developments and applications. Mol. Plant 9: 961-974.
-
(2016)
Mol. Plant
, vol.9
, pp. 961-974
-
-
Ma, X.1
Zhu, Q.2
Chen, Y.3
Liu, Y.-G.4
-
16
-
-
84944449180
-
An updated evolutionary classification of CRISPR-Cas systems
-
Makarova, K. S., Y. I. Wolf, O. S. Alkhnbashi et al., 2015 An updated evolutionary classification of CRISPR-Cas systems. Nat. Rev. Microbiol. 13: 722-736.
-
(2015)
Nat. Rev. Microbiol
, vol.13
, pp. 722-736
-
-
Makarova, K.S.1
Wolf, Y.I.2
Alkhnbashi, O.S.3
-
17
-
-
84884856342
-
Cas9 as a versatile tool for engineering biology
-
Mali, P., K. M. Esvelt, and G. M. Church, 2013 Cas9 as a versatile tool for engineering biology. Nat. Methods 10: 957-963.
-
(2013)
Nat. Methods
, vol.10
, pp. 957-963
-
-
Mali, P.1
Esvelt, K.M.2
Church, G.M.3
-
18
-
-
84856606078
-
AP2/ERF family transcription factors in plant abiotic stress responses
-
Mizoi, J., K. Shinozaki, and K. Yamaguchi-Shinozaki, 2012 AP2/ERF family transcription factors in plant abiotic stress responses. Biochim. Biophys. Acta 1819: 86-96.
-
(2012)
Biochim. Biophys. Acta
, vol.1819
, pp. 86-96
-
-
Mizoi, J.1
Shinozaki, K.2
Yamaguchi-Shinozaki, K.3
-
19
-
-
73349128782
-
Rescue and characterization of episomally replicating DNA from the moss Physcomitrella
-
Murén, E., A. Nilsson, M. Ulfstedt, M. Johansson, and H. Ronne, 2009 Rescue and characterization of episomally replicating DNA from the moss Physcomitrella. Proc. Natl. Acad. Sci. USA 106: 19444-19449.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 19444-19449
-
-
Murén, E.1
Nilsson, A.2
Ulfstedt, M.3
Johansson, M.4
Ronne, H.5
-
20
-
-
84861684452
-
An inducible RNA interference system in Physcomitrella patens reveals a dominant role of augmin in phragmoplast microtubule generation
-
Nakaoka, Y., T. Miki, R. Fujioka, R. Uehara, A. Tomioka et al., 2012 An inducible RNA interference system in Physcomitrella patens reveals a dominant role of augmin in phragmoplast microtubule generation. Plant Cell 24: 1478-1493.
-
(2012)
Plant Cell
, vol.24
, pp. 1478-1493
-
-
Nakaoka, Y.1
Miki, T.2
Fujioka, R.3
Uehara, R.4
Tomioka, A.5
-
21
-
-
84964688883
-
CRISPR/Cas9-mediated efficient and heritable targeted mutagenesis in tomato plants in the first and later generations
-
Pan, C., L. Ye, L. Qin, X. Liu, Y. He et al., 2016 CRISPR/Cas9-mediated efficient and heritable targeted mutagenesis in tomato plants in the first and later generations. Sci. Rep. 6: 24765.
-
(2016)
Sci. Rep
, vol.6
, pp. 24765
-
-
Pan, C.1
Ye, L.2
Qin, L.3
Liu, X.4
He, Y.5
-
22
-
-
84925441397
-
Determining the specificities of TALENs, Cas9, and other genome-editing enzymes
-
Pattanayak, V., J. P. Guilinger, and D. R. Liu, 2014 Determining the specificities of TALENs, Cas9, and other genome-editing enzymes. Methods Enzymol. 546: 47-78.
-
(2014)
Methods Enzymol
, vol.546
, pp. 47-78
-
-
Pattanayak, V.1
Guilinger, J.P.2
Liu, D.R.3
-
23
-
-
78049342369
-
Evolutionary crossroads in developmental biology: Physcomitrella patens
-
Prigge, M. J., and M. Bezanilla, 2010 Evolutionary crossroads in developmental biology: Physcomitrella patens. Development 137: 3535-3543.
-
(2010)
Development
, vol.137
, pp. 3535-3543
-
-
Prigge, M.J.1
Bezanilla, M.2
-
24
-
-
37849032457
-
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
-
Rensing, S. A., D. Lang, A. D. Zimmer, A. Terry, A. Salamov et al., 2008 The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319: 64-69.
-
(2008)
Science
, vol.319
, pp. 64-69
-
-
Rensing, S.A.1
Lang, D.2
Zimmer, A.D.3
Terry, A.4
Salamov, A.5
-
25
-
-
0035115728
-
Gene targeting in Physcomitrella patens
-
Schaefer, D. G., 2001 Gene targeting in Physcomitrella patens. Curr. Opin. Plant Biol. 4: 143-150.
-
(2001)
Curr. Opin. Plant Biol
, vol.4
, pp. 143-150
-
-
Schaefer, D.G.1
-
26
-
-
0031170922
-
Efficient gene targeting in the moss Physcomitrella patens
-
Schaefer, D. G., and J.-P. Zryd, 1997 Efficient gene targeting in the moss Physcomitrella patens. Plant J. 11: 1195-1206.
-
(1997)
Plant J
, vol.11
, pp. 1195-1206
-
-
Schaefer, D.G.1
Zryd, J.-P.2
-
27
-
-
0025884282
-
Stable transformation of the moss Physcomitrella patens
-
Schaefer, D., J. P. Zryd, C. D. Knight, and D. J. Cove, 1991 Stable transformation of the moss Physcomitrella patens. Mol. Gen. Genet. 226: 418-424.
-
(1991)
Mol. Gen. Genet
, vol.226
, pp. 418-424
-
-
Schaefer, D.1
Zryd, J.P.2
Knight, C.D.3
Cove, D.J.4
-
28
-
-
77952323648
-
RAD51 loss of function abolishes gene targeting and de-represses illegitimate integration in the moss Physcomitrella patens
-
Schaefer, D. G., F. Delacote, F. Charlot, N. Vrielynck, A. Guyon-Debast et al., 2010 RAD51 loss of function abolishes gene targeting and de-represses illegitimate integration in the moss Physcomitrella patens. DNA Repair (Amst.) 9: 526-533.
-
(2010)
DNA Repair (Amst.)
, vol.9
, pp. 526-533
-
-
Schaefer, D.G.1
Delacote, F.2
Charlot, F.3
Vrielynck, N.4
Guyon-Debast, A.5
-
29
-
-
84945916597
-
Microhomology-mediated end joining: a back-up survival mechanism or dedicated pathway?
-
Sfeir, A., and L. S. Symington, 2015 Microhomology-mediated end joining: a back-up survival mechanism or dedicated pathway? Trends Biochem. Sci. 40: 701-714.
-
(2015)
Trends Biochem. Sci
, vol.40
, pp. 701-714
-
-
Sfeir, A.1
Symington, L.S.2
-
30
-
-
84886871500
-
The moss Physcomitrella patens: methods and tools from cultivation to targeted analysis of gene function
-
Strotbek, C., S. Krinninger, and W. Frank, 2013 The moss Physcomitrella patens: methods and tools from cultivation to targeted analysis of gene function. Int. J. Dev. Biol. 57: 553-564.
-
(2013)
Int. J. Dev. Biol
, vol.57
, pp. 553-564
-
-
Strotbek, C.1
Krinninger, S.2
Frank, W.3
-
31
-
-
84899120939
-
CRISPR/Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L
-
Sugano, S. S., M. Shirakawa, J. Takagi, Y. Matsuda, T. Shimada et al., 2014 CRISPR/Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L. Plant Cell Physiol. 55: 475-481.
-
(2014)
Plant Cell Physiol
, vol.55
, pp. 475-481
-
-
Sugano, S.S.1
Shirakawa, M.2
Takagi, J.3
Matsuda, Y.4
Shimada, T.5
-
32
-
-
84974644123
-
Internal guide RNA interactions interfere with Cas9-mediated cleavage
-
Thyme, S. B., L. Akhmetova, T. G. Montague, E. Valen, and A. F. Schier, 2016 Internal guide RNA interactions interfere with Cas9-mediated cleavage. Nat. Commun. 7: 11750.
-
(2016)
Nat. Commun
, vol.7
, pp. 11750
-
-
Thyme, S.B.1
Akhmetova, L.2
Montague, T.G.3
Valen, E.4
Schier, A.F.5
-
33
-
-
34547591343
-
Primer3Plus, an enhanced web interface to Primer3
-
Untergasser,A., H.Nijveen,X. Rao, T. Bisseling, R. Geurts et al., 2007 Primer3Plus, an enhanced web interface to Primer3. Nucleic Acids Res. 35: 71-74.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 71-74
-
-
Untergasser, A.1
Nijveen, H.2
Rao, X.3
Bisseling, T.4
Geurts, R.5
-
34
-
-
69549119135
-
Rapid formin-mediated actin-filament elongation is essential for polarized plant cell growth
-
Vidali, L., P. A. C. van Gisbergen, C. Guérin, P. Franco, M. Li et al., 2009 Rapid formin-mediated actin-filament elongation is essential for polarized plant cell growth. Proc. Natl. Acad. Sci. USA 106: 13341-13346.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 13341-13346
-
-
Vidali, L.1
van Gisbergen, P.A.C.2
Guérin, C.3
Franco, P.4
Li, M.5
-
35
-
-
84954214717
-
Review biology and applications of CRISPR systems: harnessing nature's toolbox for genome engineering
-
Wright, A. V., J. K. Nunez, and J. A. Doudna, 2016 Review biology and applications of CRISPR systems: harnessing nature's toolbox for genome engineering. Cell 164: 29-44.
-
(2016)
Cell
, vol.164
, pp. 29-44
-
-
Wright, A.V.1
Nunez, J.K.2
Doudna, J.A.3
-
36
-
-
84949557262
-
A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis
-
Zhang, Z., Y. Mao, S. Ha, W. Liu, J. R. Botella et al., 2016 A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis. Plant Cell Rep. 35: 1519-1533.
-
(2016)
Plant Cell Rep
, vol.35
, pp. 1519-1533
-
-
Zhang, Z.1
Mao, Y.2
Ha, S.3
Liu, W.4
Botella, J.R.5
-
37
-
-
84880334849
-
Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions
-
Zimmer, A. D., D. Lang, K. Buchta, S. Rombauts, T. Nishiyama et al., 2013 Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions. BMC Genomics 14: 498.
-
(2013)
BMC Genomics
, vol.14
, pp. 498
-
-
Zimmer, A.D.1
Lang, D.2
Buchta, K.3
Rombauts, S.4
Nishiyama, T.5
|