메뉴 건너뛰기




Volumn 82, Issue 22, 2016, Pages 6633-6644

Effects of proton pump inhibitors on the gastric mucosa-associated microbiota in dyspeptic patients

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

EID: 84995474861     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01437-16     Document Type: Article
Times cited : (83)

References (57)
  • 2
    • 77957327211 scopus 로고    scopus 로고
    • Safety of proton pump inhibitor exposure
    • Yang YX, Metz DC. 2010. Safety of proton pump inhibitor exposure. Gastroenterology 139:1115-1127. http://dx.doi.org/10.1053/j.gastro.2010.08.023.
    • (2010) Gastroenterology , vol.139 , pp. 1115-1127
    • Yang, Y.X.1    Metz, D.C.2
  • 4
    • 33644892551 scopus 로고    scopus 로고
    • Review article: proton pump inhibitors and bacterial overgrowth
    • Williams C, McColl KE. 2006. Review article: proton pump inhibitors and bacterial overgrowth. Aliment Pharmacol Ther 23:3-10. http://dx.doi.org/10.1111/j.1365-2036.2006.02707.x.
    • (2006) Aliment Pharmacol Ther , vol.23 , pp. 3-10
    • Williams, C.1    McColl, K.E.2
  • 5
    • 84899799222 scopus 로고    scopus 로고
    • Participation of microbiota in the development of gastric cancer
    • Wang LL, Yu XJ, Zhan SH, Jia SJ, Tian ZB, Dong QJ. 2014. Participation of microbiota in the development of gastric cancer. World J Gastroenterol 20:4948-4952. http://dx.doi.org/10.3748/wjg.v20.i17.4948.
    • (2014) World J Gastroenterol , vol.20 , pp. 4948-4952
    • Wang, L.L.1    Yu, X.J.2    Zhan, S.H.3    Jia, S.J.4    Tian, Z.B.5    Dong, Q.J.6
  • 6
    • 84896400379 scopus 로고    scopus 로고
    • Review article: bacteria and pathogenesis of disease in the upper gastrointestinal tract-beyond the era of Helicobacter pylori
    • Walker MM, Talley NJ. 2014. Review article: bacteria and pathogenesis of disease in the upper gastrointestinal tract-beyond the era of Helicobacter pylori. Aliment Pharmacol Ther 39:767-779. http://dx.doi.org/10.1111/apt.12666.
    • (2014) Aliment Pharmacol Ther , vol.39 , pp. 767-779
    • Walker, M.M.1    Talley, N.J.2
  • 8
    • 84916604636 scopus 로고    scopus 로고
    • Correlation between chronic treatment with proton pump inhibitors and bacterial overgrowth in the stomach: any possible beneficial role for selected lactobacilli?
    • Del Piano M, Pagliarulo M, Tari R, Carmagnola S, Balzarini M, Lorenzini P, Pane M. 2014. Correlation between chronic treatment with proton pump inhibitors and bacterial overgrowth in the stomach: any possible beneficial role for selected lactobacilli? J Clin Gastroenterol 48(Suppl 1): S40-S46. http://dx.doi.org/10.1097/MCG.0000000000000256.
    • (2014) J Clin Gastroenterol , vol.48 , pp. S40-S46
    • Del Piano, M.1    Pagliarulo, M.2    Tari, R.3    Carmagnola, S.4    Balzarini, M.5    Lorenzini, P.6    Pane, M.7
  • 9
    • 84873745317 scopus 로고    scopus 로고
    • Gut microbiota, immune development and function
    • Bengmark S. 2013. Gut microbiota, immune development and function. Pharmacol Res 69:87-113. http://dx.doi.org/10.1016/j.phrs.2012.09.002.
    • (2013) Pharmacol Res , vol.69 , pp. 87-113
    • Bengmark, S.1
  • 10
    • 0035115434 scopus 로고    scopus 로고
    • Non-Helicobacter pylori bacterial flora during acid-suppressive therapy: differential findings in gastric juice and gastric mucosa
    • Sanduleanu S, Jonkers D, De Bruine A, Hameeteman W, Stockbrügger RW. 2001. Non-Helicobacter pylori bacterial flora during acid-suppressive therapy: differential findings in gastric juice and gastric mucosa. Aliment Pharmacol Ther 15:379-388. http://dx.doi.org/10.1046/j.1365-2036.2001.00888.x.
    • (2001) Aliment Pharmacol Ther , vol.15 , pp. 379-388
    • Sanduleanu, S.1    Jonkers, D.2    De Bruine, A.3    Hameeteman, W.4    Stockbrügger, R.W.5
  • 12
    • 84906944887 scopus 로고    scopus 로고
    • Gastric microbiota is altered in oesophagitis and Barrett's oesophagus and further modified by proton pump inhibitors
    • Amir I, Konikoff FM, Oppenheim M, Gophna U, Half EE. 2014. Gastric microbiota is altered in oesophagitis and Barrett's oesophagus and further modified by proton pump inhibitors. Environ Microbiol 16:2905-2914. http://dx.doi.org/10.1111/1462-2920.12285.
    • (2014) Environ Microbiol , vol.16 , pp. 2905-2914
    • Amir, I.1    Konikoff, F.M.2    Oppenheim, M.3    Gophna, U.4    Half, E.E.5
  • 13
    • 84925450745 scopus 로고    scopus 로고
    • Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods
    • Eun CS, Kim BK, Han DS, Kim SY, Kim KM, Choi BY, Song KS, Kim YS, Kim JF. 2014. Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods. Helicobacter 19:407-416. http://dx.doi.org/10.1111/hel.12145.
    • (2014) Helicobacter , vol.19 , pp. 407-416
    • Eun, C.S.1    Kim, B.K.2    Han, D.S.3    Kim, S.Y.4    Kim, K.M.5    Choi, B.Y.6    Song, K.S.7    Kim, Y.S.8    Kim, J.F.9
  • 14
    • 84930761825 scopus 로고    scopus 로고
    • Therapeutic strategies for functional dyspepsia and irritable bowel syndrome based on pathophysiology
    • Talley NJ, Holtmann G, Walker MM. 2015. Therapeutic strategies for functional dyspepsia and irritable bowel syndrome based on pathophysiology. J Gastroenterol 50:601-613. http://dx.doi.org/10.1007/s00535-015-1076-x.
    • (2015) J Gastroenterol , vol.50 , pp. 601-613
    • Talley, N.J.1    Holtmann, G.2    Walker, M.M.3
  • 16
    • 33745195704 scopus 로고    scopus 로고
    • Gastro-oesophageal reflux disease
    • Moayyedi P, Talley NJ. 2006. Gastro-oesophageal reflux disease. Lancet 367:2086-2100. http://dx.doi.org/10.1016/S0140-6736(06)68932-0.
    • (2006) Lancet , vol.367 , pp. 2086-2100
    • Moayyedi, P.1    Talley, N.J.2
  • 17
    • 84859813382 scopus 로고    scopus 로고
    • Current management of functional dyspepsia: impact of Rome III subdivision
    • Karamanolis GP, Tack J. 2012. Current management of functional dyspepsia: impact of Rome III subdivision. Ann Gastroenterol 25:96-99.
    • (2012) Ann Gastroenterol , vol.25 , pp. 96-99
    • Karamanolis, G.P.1    Tack, J.2
  • 20
    • 84923922666 scopus 로고    scopus 로고
    • The impact of proton pump inhibitors on the human gastrointestinal microbiome
    • Freedberg DE, Lebwohl B, Abrams JA. 2014. The impact of proton pump inhibitors on the human gastrointestinal microbiome. Clin Lab Med 34: 771-785. http://dx.doi.org/10.1016/j.cll.2014.08.008.
    • (2014) Clin Lab Med , vol.34 , pp. 771-785
    • Freedberg, D.E.1    Lebwohl, B.2    Abrams, J.A.3
  • 21
    • 84929081231 scopus 로고    scopus 로고
    • Continuous proton pump inhibitor therapy and the associated risk of recurrent Clostridium difficile infection
    • McDonald EG, Milligan J, Frenette C, Lee TC. 2015. Continuous proton pump inhibitor therapy and the associated risk of recurrent Clostridium difficile infection. JAMA Intern Med 175:784-791. http://dx.doi.org/10.1001/jamainternmed.2015.42.
    • (2015) JAMA Intern Med , vol.175 , pp. 784-791
    • McDonald, E.G.1    Milligan, J.2    Frenette, C.3    Lee, T.C.4
  • 22
    • 84937515835 scopus 로고    scopus 로고
    • The inappropriate prescription of oral proton pump inhibitors in the hospital setting: a prospective cross-sectional study
    • Kelly OB, Dillane C, Patchett SE, Harewood GC, Murray FE. 2015. The inappropriate prescription of oral proton pump inhibitors in the hospital setting: a prospective cross-sectional study. Dig Dis Sci 60:2280-2286. http://dx.doi.org/10.1007/s10620-015-3642-8.
    • (2015) Dig Dis Sci , vol.60 , pp. 2280-2286
    • Kelly, O.B.1    Dillane, C.2    Patchett, S.E.3    Harewood, G.C.4    Murray, F.E.5
  • 23
    • 84934268486 scopus 로고    scopus 로고
    • Partnership in optimizing management of reflux symptoms: a treatment algorithm for over-thecounter proton-pump inhibitors
    • Boardman HF, Delaney BC, Haag S. 2015. Partnership in optimizing management of reflux symptoms: a treatment algorithm for over-thecounter proton-pump inhibitors. Curr Med Res Opin 31:1309-1318. http://dx.doi.org/10.1185/03007995.2015.1047745.
    • (2015) Curr Med Res Opin , vol.31 , pp. 1309-1318
    • Boardman, H.F.1    Delaney, B.C.2    Haag, S.3
  • 24
    • 84906772721 scopus 로고    scopus 로고
    • Diagnosis of Helicobacter pylori infection
    • Mégraud F, Bessède E, Lehours P. 2014. Diagnosis of Helicobacter pylori infection. Helicobacter 19(Suppl 1):S6-S10. http://dx.doi.org/10.1111/hel.12161.
    • (2014) Helicobacter , vol.19 , pp. S6-S10
    • Mégraud, F.1    Bessède, E.2    Lehours, P.3
  • 25
    • 84881248575 scopus 로고    scopus 로고
    • Survival in hostile territory: the microbiota of the stomach
    • Yang I, Nell S, Suerbaum S. 2013. Survival in hostile territory: the microbiota of the stomach. FEMS Microbiol Rev 37:736-761. http://dx.doi.org/10.1111/1574-6976.12027.
    • (2013) FEMS Microbiol Rev , vol.37 , pp. 736-761
    • Yang, I.1    Nell, S.2    Suerbaum, S.3
  • 26
    • 40149103278 scopus 로고    scopus 로고
    • Errorcorrecting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R. 2008. Errorcorrecting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat Methods 5:235-237. http://dx.doi.org/10.1038/nmeth.1184.
    • (2008) Nat Methods , vol.5 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 27
    • 84862631902 scopus 로고    scopus 로고
    • Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
    • Soergel DA, Dey N, Knight R, Brenner SE. 2012. Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences. ISME J 6:1440-1444. http://dx.doi.org/10.1038/ismej.2011.208.
    • (2012) ISME J , vol.6 , pp. 1440-1444
    • Soergel, D.A.1    Dey, N.2    Knight, R.3    Brenner, S.E.4
  • 28
    • 34547834963 scopus 로고    scopus 로고
    • The use of coded PCR primers enables highthroughput sequencing of multiple homolog amplification products by 454 parallel sequencing
    • Binladen J, Gilbert MT, Bollback JP, Panitz F, Bendixen C, Nielsen R, Willerslev E. 2007. The use of coded PCR primers enables highthroughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One 2:e197. http://dx.doi.org/10.1371/journal.pone.0000197.
    • (2007) PLoS One , vol.2
    • Binladen, J.1    Gilbert, M.T.2    Bollback, J.P.3    Panitz, F.4    Bendixen, C.5    Nielsen, R.6    Willerslev, E.7
  • 30
    • 77956304094 scopus 로고    scopus 로고
    • Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
    • Reeder J, Knight R. 2010. Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions. Nat Methods 7:668-669. http://dx.doi.org/10.1038/nmeth0910-668b.
    • (2010) Nat Methods , vol.7 , pp. 668-669
    • Reeder, J.1    Knight, R.2
  • 32
    • 79961181125 scopus 로고    scopus 로고
    • UCHIME improves sensitivity and speed of chimera detection
    • Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. 2011. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27: 2194-2200. http://dx.doi.org/10.1093/bioinformatics/btr381.
    • (2011) Bioinformatics , vol.27 , pp. 2194-2200
    • Edgar, R.C.1    Haas, B.J.2    Clemente, J.C.3    Quince, C.4    Knight, R.5
  • 34
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461. http://dx.doi.org/10.1093/bioinformatics/btq461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 35
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-approximately maximum-likelihood trees for large alignments
    • Price MN, Dehal PS, Arkin AP. 2010. FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS One 5:e9490. http://dx.doi.org/10.1371/journal.pone.0009490.
    • (2010) PLoS One , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 36
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good IJ. 1953. The population frequencies of species and the estimation of population parameters. Biometrika 40:237-264. http://dx.doi.org/10.1093/biomet/40.3-4.237.
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.J.1
  • 37
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context
    • Lozupone C, Hamady M, Knight R. 2006. UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7:371. http://dx.doi.org/10.1186/1471-2105-7-371.
    • (2006) BMC Bioinformatics , vol.7 , pp. 371
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 41
    • 71049159648 scopus 로고    scopus 로고
    • Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal anti-inflammatory drug use
    • Li XX, Wong GL, To KF, Wong VW, Lai LH, Chow DK, Lau JY, Sung JJ, Ding C. 2009. Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal anti-inflammatory drug use. PLoS One 4:e7985. http://dx.doi.org/10.1371/journal.pone.0007985.
    • (2009) PLoS One , vol.4
    • Li, X.X.1    Wong, G.L.2    To, K.F.3    Wong, V.W.4    Lai, L.H.5    Chow, D.K.6    Lau, J.Y.7    Sung, J.J.8    Ding, C.9
  • 42
    • 84879115930 scopus 로고    scopus 로고
    • Helicobacter pylori and the gastric microbiota
    • Engstrand L, Lindberg M. 2013. Helicobacter pylori and the gastric microbiota. Best Pract Res Clin Gastroenterol 27:39-45. http://dx.doi.org/10.1016/j.bpg.2013.03.016.
    • (2013) Best Pract Res Clin Gastroenterol , vol.27 , pp. 39-45
    • Engstrand, L.1    Lindberg, M.2
  • 43
    • 84876110698 scopus 로고    scopus 로고
    • Microbiological survey of the human gastric ecosystem using culturing and pyrosequencing methods
    • Delgado S, Cabrera-Rubio R, Mira A, Suárez A, Mayo B. 2013. Microbiological survey of the human gastric ecosystem using culturing and pyrosequencing methods. Microb Ecol 65:763-772. http://dx.doi.org/10.1007/s00248-013-0192-5.
    • (2013) Microb Ecol , vol.65 , pp. 763-772
    • Delgado, S.1    Cabrera-Rubio, R.2    Mira, A.3    Suárez, A.4    Mayo, B.5
  • 44
    • 84933278302 scopus 로고    scopus 로고
    • 16S community profiling identifies proton pump inhibitor related differences in gastric, lung, and oropharyngeal microflora
    • Rosen R, Hu L, Amirault J, Khatwa U, Ward DV, Onderdonk A. 2015. 16S community profiling identifies proton pump inhibitor related differences in gastric, lung, and oropharyngeal microflora. J Pediatr 166:917-923. http://dx.doi.org/10.1016/j.jpeds.2014.12.067.
    • (2015) J Pediatr , vol.166 , pp. 917-923
    • Rosen, R.1    Hu, L.2    Amirault, J.3    Khatwa, U.4    Ward, D.V.5    Onderdonk, A.6
  • 46
    • 65649150743 scopus 로고    scopus 로고
    • Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls
    • Dicksved J, Lindberg M, Rosenquist M, Enroth H, Jansson JK, Engstrand L. 2009. Molecular characterization of the stomach microbiota in patients with gastric cancer and in controls. J Med Microbiol 58:509-516. http://dx.doi.org/10.1099/jmm.0.007302-0.
    • (2009) J Med Microbiol , vol.58 , pp. 509-516
    • Dicksved, J.1    Lindberg, M.2    Rosenquist, M.3    Enroth, H.4    Jansson, J.K.5    Engstrand, L.6
  • 48
    • 84878013732 scopus 로고    scopus 로고
    • Life in the human stomach: persistence strategies of the bacterial pathogen Helicobacter pylori
    • Salama NR, Hartung ML, Müller A. 2013. Life in the human stomach: persistence strategies of the bacterial pathogen Helicobacter pylori. Nat Rev Microbiol 11:385-399. http://dx.doi.org/10.1038/nrmicro3016.
    • (2013) Nat Rev Microbiol , vol.11 , pp. 385-399
    • Salama, N.R.1    Hartung, M.L.2    Müller, A.3
  • 49
    • 70349211747 scopus 로고    scopus 로고
    • Coadaptation of Helicobacter pylori and humans: ancient history, modern implications
    • Atherton JC, Blaser MJ. 2009. Coadaptation of Helicobacter pylori and humans: ancient history, modern implications. J Clin Invest 119:2475-2487. http://dx.doi.org/10.1172/JCI38605.
    • (2009) J Clin Invest , vol.119 , pp. 2475-2487
    • Atherton, J.C.1    Blaser, M.J.2
  • 50
    • 84877811916 scopus 로고    scopus 로고
    • The degree of Helicobacter pylori-triggered inflammation is manipulated by preinfection host microbiota
    • Rolig AS, Cech C, Ahler E, Carter JE, Ottemann KM. 2013. The degree of Helicobacter pylori-triggered inflammation is manipulated by preinfection host microbiota. Infect Immun 81:1382-1389. http://dx.doi.org/10.1128/IAI.00044-13.
    • (2013) Infect Immun , vol.81 , pp. 1382-1389
    • Rolig, A.S.1    Cech, C.2    Ahler, E.3    Carter, J.E.4    Ottemann, K.M.5
  • 51
    • 66249145772 scopus 로고    scopus 로고
    • Statistical methods for detecting differentially abundant features in clinical metagenomic samples
    • White JR, Nagarajan N, Pop M. 2009. Statistical methods for detecting differentially abundant features in clinical metagenomic samples. PLoSComput Biol 5:e1000352. http://dx.doi.org/10.1371/journal.pcbi.1000352.
    • (2009) PLoSComput Biol , vol.5
    • White, J.R.1    Nagarajan, N.2    Pop, M.3
  • 55
    • 33646827451 scopus 로고    scopus 로고
    • Therapy with gastric acidity inhibitors increases the risk of acute gastroenteritis and communityacquired pneumonia in children
    • Canani RB, Cirillo P, Roggero P, Romano C, Malamisura B, Terrin G, Passariello A, Manguso F, Morelli L, Guarino A, Working Group on Intestinal Infections of the Italian Society of Pediatric Gastroenterology Hepatology and Nutrition (SIGENP). 2006. Therapy with gastric acidity inhibitors increases the risk of acute gastroenteritis and communityacquired pneumonia in children. Pediatrics 117:e817-e820. http://dx.doi.org/10.1542/peds.2005-1655.
    • (2006) Pediatrics , vol.117 , pp. e817-e820
    • Canani, R.B.1    Cirillo, P.2    Roggero, P.3    Romano, C.4    Malamisura, B.5    Terrin, G.6    Passariello, A.7    Manguso, F.8    Morelli, L.9    Guarino, A.10
  • 56
    • 34248522811 scopus 로고    scopus 로고
    • Use of proton pump inhibitors and the risk of community-acquired pneumonia: a population-based case-control study
    • Gulmez SE, Holm A, Frederiksen H, Jensen TG, Pedersen C, Hallas J. 2007. Use of proton pump inhibitors and the risk of community-acquired pneumonia: a population-based case-control study. Arch Intern Med 167: 950-955. http://dx.doi.org/10.1001/archinte.167.9.950.
    • (2007) Arch Intern Med , vol.167 , pp. 950-955
    • Gulmez, S.E.1    Holm, A.2    Frederiksen, H.3    Jensen, T.G.4    Pedersen, C.5    Hallas, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.