-
1
-
-
84966386457
-
Regulation of gene transcription by Polycomb proteins
-
Aranda S, Mas G, Di Croce L. 2015. Regulation of gene transcription by Polycomb proteins. Sci Adv 1: e1500737.
-
(2015)
Sci Adv
, vol.1
-
-
Aranda, S.1
Mas, G.2
Di Croce, L.3
-
2
-
-
77958043949
-
Cdk phosphorylation of a nucleoporin controls localization of active genes through the cell cycle
-
Brickner DG, Brickner JH. 2010. Cdk phosphorylation of a nucleoporin controls localization of active genes through the cell cycle. Mol Biol Cell 21: 3421–3432.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 3421-3432
-
-
Brickner, D.G.1
Brickner, J.H.2
-
3
-
-
40349113413
-
Global histone acetylation induces functional genomic reorganization at mammalian nuclear pore complexes
-
Brown CR, Kennedy CJ, Delmar VA, Forbes DJ, Silver PA. 2008. Global histone acetylation induces functional genomic reorganization at mammalian nuclear pore complexes. Genes Dev 22: 627–639.
-
(2008)
Genes Dev
, vol.22
, pp. 627-639
-
-
Brown, C.R.1
Kennedy, C.J.2
Delmar, V.A.3
Forbes, D.J.4
Silver, P.A.5
-
4
-
-
79961105781
-
Osteoblast mineralization requires β1 integrin/ICAP-1-dependent fibronectin deposition
-
Brunner M, Millon-Frémillon A, Chevalier G, Nakchbandi IA, Mosher D, Block MR, Albigès-Rizo C, Bouvard D. 2011. Osteoblast mineralization requires β1 integrin/ICAP-1-dependent fibronectin deposition. J Cell Biol 194: 307–322.
-
(2011)
J Cell Biol
, vol.194
, pp. 307-322
-
-
Brunner, M.1
Millon-Frémillon, A.2
Chevalier, G.3
Nakchbandi, I.A.4
Mosher, D.5
Block, M.R.6
Albigès-Rizo, C.7
Bouvard, D.8
-
5
-
-
84905984203
-
Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics
-
Buchwalter AL, Liang Y, Hetzer MW. 2014. Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics. Mol Biol Cell 25: 2472–2484.
-
(2014)
Mol Biol Cell
, vol.25
, pp. 2472-2484
-
-
Buchwalter, A.L.1
Liang, Y.2
Hetzer, M.W.3
-
6
-
-
67650147960
-
The role of nuclear pores in gene regulation, development and disease
-
Capelson M, Hetzer MW. 2009. The role of nuclear pores in gene regulation, development and disease. EMBO Rep 10: 697–705.
-
(2009)
EMBO Rep
, vol.10
, pp. 697-705
-
-
Capelson, M.1
Hetzer, M.W.2
-
7
-
-
75749103380
-
Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes
-
Capelson M, Liang Y, Schulte R, Mair W, Wagner U, Hetzer MW. 2010. Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes. Cell 140: 372–383.
-
(2010)
Cell
, vol.140
, pp. 372-383
-
-
Capelson, M.1
Liang, Y.2
Schulte, R.3
Mair, W.4
Wagner, U.5
Hetzer, M.W.6
-
8
-
-
84875200698
-
Functional implications of genome topology
-
Cavalli G, Misteli T. 2013. Functional implications of genome topology. Nat Struct Mol Biol 20: 290–299.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 290-299
-
-
Cavalli, G.1
Misteli, T.2
-
9
-
-
84857031394
-
A change in nuclear pore complex composition regulates cell differentiation
-
D’Angelo MA, Gomez-Cavazos JS, Mei A, Lackner DH, Hetzer MW. 2012. A change in nuclear pore complex composition regulates cell differentiation. Dev Cell 22: 446–458.
-
(2012)
Dev Cell
, vol.22
, pp. 446-458
-
-
D’Angelo, M.A.1
Gomez-Cavazos, J.S.2
Mei, A.3
Lackner, D.H.4
Hetzer, M.W.5
-
10
-
-
52949107958
-
Structure, dynamics and function of nuclear pore complexes
-
D’Angelo MA, Hetzer MW. 2008. Structure, dynamics and function of nuclear pore complexes. Trends Cell Biol 18: 456–466.
-
(2008)
Trends Cell Biol
, vol.18
, pp. 456-466
-
-
D’Angelo, M.A.1
Hetzer, M.W.2
-
11
-
-
84916880365
-
Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes
-
Dowen JM, Fan ZP, Hnisz D, Ren G, Abraham BJ, Zhang LN, Weintraub AS, Schuijers J, Lee TI, Zhao K, et al. 2014. Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes. Cell 159: 374–387.
-
(2014)
Cell
, vol.159
, pp. 374-387
-
-
Dowen, J.M.1
Fan, Z.P.2
Hnisz, D.3
Ren, G.4
Abraham, B.J.5
Zhang, L.N.6
Weintraub, A.S.7
Schuijers, J.8
Lee, T.I.9
Zhao, K.10
-
12
-
-
1642423486
-
Distinct functional domains within nucleoporins Nup153 and Nup98 mediate transcription-dependent mobility
-
Griffis ER, Craige B, Dimaano C, Ullman KS, Powers MA. 2004. Distinct functional domains within nucleoporins Nup153 and Nup98 mediate transcription-dependent mobility. Mol Biol Cell 15: 1991–2002.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 1991-2002
-
-
Griffis, E.R.1
Craige, B.2
Dimaano, C.3
Ullman, K.S.4
Powers, M.A.5
-
13
-
-
45149084413
-
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
-
Guelen L, Pagie L, Brasset E, Meuleman W, Faza MB, Talhout W, Eussen BH, de Klein A, Wessels L, de LaatW, et al. 2008. Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions. Nature 453: 948–951.
-
(2008)
Nature
, vol.453
, pp. 948-951
-
-
Guelen, L.1
Pagie, L.2
Brasset, E.3
Meuleman, W.4
Faza, M.B.5
Talhout, W.6
Eussen, B.H.7
De Klein, A.8
Wessels, L.9
De, L.10
-
15
-
-
84888015137
-
Super-enhancers in the control of cell identity and disease
-
Hnisz D, Abraham BJ, Lee TI, Lau A, Saint-André V, Sigova AA, Hoke HA, Young RA. 2013. Super-enhancers in the control of cell identity and disease. Cell 155: 934–947.
-
(2013)
Cell
, vol.155
, pp. 934-947
-
-
Hnisz, D.1
Abraham, B.J.2
Lee, T.I.3
Lau, A.4
Saint-André, V.5
Sigova, A.A.6
Hoke, H.A.7
Young, R.A.8
-
16
-
-
0347363471
-
Latent TGF-β binding protein LTBP-2 decreases fibroblast adhesion to fibronectin
-
Hyytiäinen M, Keski-Oja J. 2003. Latent TGF-β binding protein LTBP-2 decreases fibroblast adhesion to fibronectin. J Cell Biol 163: 1363–1374.
-
(2003)
J Cell Biol
, vol.163
, pp. 1363-1374
-
-
Hyytiäinen, M.1
Keski-Oja, J.2
-
17
-
-
84923043962
-
Nuclear pore proteins and the control of genome functions
-
Ibarra A, Hetzer MW. 2015. Nuclear pore proteins and the control of genome functions. Genes Dev 29: 337–349.
-
(2015)
Genes Dev
, vol.29
, pp. 337-349
-
-
Ibarra, A.1
Hetzer, M.W.2
-
18
-
-
0037205232
-
Chromatin boundaries in budding yeast: The nuclear pore connection
-
Ishii K, Arib G, Lin C, Van Houwe G, Laemmli UK. 2002. Chromatin boundaries in budding yeast: the nuclear pore connection. Cell 109: 551–562.
-
(2002)
Cell
, vol.109
, pp. 551-562
-
-
Ishii, K.1
Arib, G.2
Lin, C.3
Van Houwe, G.4
Laemmli, U.K.5
-
19
-
-
84933556936
-
The nucleoporin Nup153 regulates embryonic stem cell pluripotency through gene silencing
-
Jacinto FV, Benner C, Hetzer MW. 2015. The nucleoporin Nup153 regulates embryonic stem cell pluripotency through gene silencing. Genes Dev 29: 1224–1238.
-
(2015)
Genes Dev
, vol.29
, pp. 1224-1238
-
-
Jacinto, F.V.1
Benner, C.2
Hetzer, M.W.3
-
20
-
-
75749117571
-
Nucleoporins directly stimulate expression of developmental and cell-cycle genes inside the nucleoplasm
-
Kalverda B, Pickersgill H, Shloma VV, Fornerod M. 2010. Nucleoporins directly stimulate expression of developmental and cell-cycle genes inside the nucleoplasm. Cell 140: 360–371.
-
(2010)
Cell
, vol.140
, pp. 360-371
-
-
Kalverda, B.1
Pickersgill, H.2
Shloma, V.V.3
Fornerod, M.4
-
21
-
-
0032927877
-
CREB binding protein interacts with nucleoporinspecific FG repeats that activate transcription and mediate NUP98– HOXA9 oncogenicity
-
Kasper LH, Brindle PK, Schnabel CA, Pritchard CE, Cleary ML, van Deursen JM. 1999. CREB binding protein interacts with nucleoporinspecific FG repeats that activate transcription and mediate NUP98– HOXA9 oncogenicity. Mol Cell Biol 19: 764–776.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 764-776
-
-
Kasper, L.H.1
Brindle, P.K.2
Schnabel, C.A.3
Pritchard, C.E.4
Cleary, M.L.5
Van Deursen, J.M.6
-
22
-
-
2942538442
-
Ext1-dependent heparan sulfate regulates the range of Ihh signaling during endochondral ossification
-
Koziel L, Kunath M, Kelly OG, Vortkamp A. 2004. Ext1-dependent heparan sulfate regulates the range of Ihh signaling during endochondral ossification. Dev Cell 6: 801–813.
-
(2004)
Dev Cell
, vol.6
, pp. 801-813
-
-
Koziel, L.1
Kunath, M.2
Kelly, O.G.3
Vortkamp, A.4
-
23
-
-
84874760365
-
Dynamic association of NUP98 with the human genome
-
Liang Y, Franks TM, Marchetto MC, Gage FH, Hetzer MW. 2013. Dynamic association of NUP98 with the human genome. PLoS Genet 9: e1003308.
-
(2013)
Plos Genet
, vol.9
-
-
Liang, Y.1
Franks, T.M.2
Marchetto, M.C.3
Gage, F.H.4
Hetzer, M.W.5
-
24
-
-
84929337088
-
Nuclear architecture dictates HIV-1 integration site selection
-
Marini B, Kertesz-Farkas A, Ali H, Lucic B, Lisek K, Manganaro L, Pongor S, Luzzati R, Recchia A, Mavilio F, et al. 2015. Nuclear architecture dictates HIV-1 integration site selection. Nature 521: 227–231.
-
(2015)
Nature
, vol.521
, pp. 227-231
-
-
Marini, B.1
Kertesz-Farkas, A.2
Ali, H.3
Lucic, B.4
Lisek, K.5
Manganaro, L.6
Pongor, S.7
Luzzati, R.8
Recchia, A.9
Mavilio, F.10
-
25
-
-
77951616674
-
The nuclear envelope in genome organization, expression and stability
-
Mekhail K, Moazed D. 2010. The nuclear envelope in genome organization, expression and stability. Nat Rev Mol Cell Biol 11: 317–328.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 317-328
-
-
Mekhail, K.1
Moazed, D.2
-
26
-
-
84873375779
-
Constitutive nuclear laminagenome interactions are highly conserved and associated with A/Trich sequence
-
Meuleman W, Peric-Hupkes D, Kind J, Beaudry J-B, Pagie L, Kellis M, Reinders M, Wessels L, van Steensel B. 2013. Constitutive nuclear laminagenome interactions are highly conserved and associated with A/Trich sequence. Genome Res 23: 270–280.
-
(2013)
Genome Res
, vol.23
, pp. 270-280
-
-
Meuleman, W.1
Peric-Hupkes, D.2
Kind, J.3
Beaudry, J.-B.4
Pagie, L.5
Kellis, M.6
Reinders, M.7
Wessels, L.8
Van Steensel, B.9
-
28
-
-
0030224048
-
Tyrosine phosphorylation of p130Cas in cell adhesion and transformation
-
Nojima Y, Mimura T, Morino N, Hamasaki K, Furuya H, Sakai R, Nakamoto T, Yazaki Y, Hirai H. 1996. Tyrosine phosphorylation of p130Cas in cell adhesion and transformation. Hum Cell 9: 169–174.
-
(1996)
Hum Cell
, vol.9
, pp. 169-174
-
-
Nojima, Y.1
Mimura, T.2
Morino, N.3
Hamasaki, K.4
Furuya, H.5
Sakai, R.6
Nakamoto, T.7
Yazaki, Y.8
Hirai, H.9
-
29
-
-
84887072795
-
Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants
-
Parker SCJ, Stitzel ML, Taylor DL, Orozco JM, Erdos MR, Akiyama JA, van Bueren KL, Chines PS, Narisu N, NISC Comparative Sequencing Program, et al. 2013. Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants. Proc Natl Acad Sci 110: 17921–17926.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 17921-17926
-
-
Parker, S.1
Stitzel, M.L.2
Taylor, D.L.3
Orozco, J.M.4
Erdos, M.R.5
Akiyama, J.A.6
Van Bueren, K.L.7
Chines, P.S.8
Narisu, N.9
Comparative Sequencing Program, N.10
-
30
-
-
84925283769
-
What are super-enhancers?
-
Pott S, Lieb JD. 2015. What are super-enhancers? Nat Genet 47: 8–12.
-
(2015)
Nat Genet
, vol.47
, pp. 8-12
-
-
Pott, S.1
Lieb, J.D.2
-
31
-
-
7944236264
-
Mapping the dynamic organization of the nuclear pore complex inside single living cells
-
Rabut G, Doye V, Ellenberg J. 2004. Mapping the dynamic organization of the nuclear pore complex inside single living cells. Nat Cell Biol 6: 1114–1121.
-
(2004)
Nat Cell Biol
, vol.6
, pp. 1114-1121
-
-
Rabut, G.1
Doye, V.2
Ellenberg, J.3
-
32
-
-
84867786612
-
Nuclear pore complex composition: A new regulator of tissue-specific and developmental functions
-
Raices M, D’Angelo MA. 2012. Nuclear pore complex composition: a new regulator of tissue-specific and developmental functions. Nat Rev Mol Cell Biol 13: 687–699.
-
(2012)
Nat Rev Mol Cell Biol
, vol.13
, pp. 687-699
-
-
Raices, M.1
D’Angelo, M.A.2
-
33
-
-
84873302358
-
LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation
-
Solovei I, Wang AS, Thanisch K, Schmidt CS, Krebs S, Zwerger M, Cohen TV, Devys D, Foisner R, Peichl L, et al. 2013. LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation. Cell 152: 584–598.
-
(2013)
Cell
, vol.152
, pp. 584-598
-
-
Solovei, I.1
Wang, A.S.2
Thanisch, K.3
Schmidt, C.S.4
Krebs, S.5
Zwerger, M.6
Cohen, T.V.7
Devys, D.8
Foisner, R.9
Peichl, L.10
-
34
-
-
77956276383
-
DNase-seq: A high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells
-
Song L, Crawford GE. 2010. DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells. Cold Spring Harb Protoc doi: 10.1101/pdb.prot5384.
-
(2010)
Cold Spring Harb Protoc Doi: 10.1101/Pdb.Prot5384
-
-
Song, L.1
Crawford, G.E.2
-
35
-
-
72749098124
-
Gene loops function to maintain transcriptional memory through interaction with the nuclear pore complex
-
Tan-Wong SM, Wijayatilake HD, Proudfoot NJ. 2009. Gene loops function to maintain transcriptional memory through interaction with the nuclear pore complex. Genes Dev 23: 2610–2624.
-
(2009)
Genes Dev
, vol.23
, pp. 2610-2624
-
-
Tan-Wong, S.M.1
Wijayatilake, H.D.2
Proudfoot, N.J.3
-
36
-
-
84865687580
-
Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery
-
Towbin BD, González-Aguilera C, Sack R, Gaidatzis D, Kalck V, Meister P, Askjaer P, Gasser SM. 2012. Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery. Cell 150: 934–947.
-
(2012)
Cell
, vol.150
, pp. 934-947
-
-
Towbin, B.D.1
González-Aguilera, C.2
Sack, R.3
Gaidatzis, D.4
Kalck, V.5
Meister, P.6
Askjaer, P.7
Gasser, S.M.8
-
37
-
-
84928560965
-
Super-enhancers delineate disease-associated regulatory nodes in T cells
-
Vahedi G, Kanno Y, Furumoto Y, Jiang K, Parker SCJ, Erdos MR, Davis SR, Roychoudhuri R, Restifo NP, Gadina M, et al. 2015. Super-enhancers delineate disease-associated regulatory nodes in T cells. Nature 520: 558–562.
-
(2015)
Nature
, vol.520
, pp. 558-562
-
-
Vahedi, G.1
Kanno, Y.2
Furumoto, Y.3
Jiang, K.4
Parker, S.5
Erdos, M.R.6
Davis, S.R.7
Roychoudhuri, R.8
Restifo, N.P.9
Gadina, M.10
-
39
-
-
77649210955
-
Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome
-
Vaquerizas JM, Suyama R, Kind J, Miura K, Luscombe NM, Akhtar A. 2010. Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome. PLoS Genet 6: e1000846.
-
(2010)
Plos Genet
, vol.6
-
-
Vaquerizas, J.M.1
Suyama, R.2
Kind, J.3
Miura, K.4
Luscombe, N.M.5
Akhtar, A.6
|