-
1
-
-
68349143277
-
Enzymatic properties of the N- and C-terminal halves of human hexokinase II
-
Ahn, K.J., Kim, J., Yun, M., Park, J.H., Lee, J.D., Enzymatic properties of the N- and C-terminal halves of human hexokinase II. BMB Rep. 42 (2009), 350–355.
-
(2009)
BMB Rep.
, vol.42
, pp. 350-355
-
-
Ahn, K.J.1
Kim, J.2
Yun, M.3
Park, J.H.4
Lee, J.D.5
-
2
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders, S., Huber, W., Differential expression analysis for sequence count data. Genome Biol., 11, 2010, R106.
-
(2010)
Genome Biol.
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
3
-
-
56349106315
-
Physical activity and insulin sensitivity: the RISC study
-
Balkau, B., Mhamdi, L., Oppert, J.M., Nolan, J., Golay, A., Porcellati, F., Laakso, M., Ferrannini, E., EGIR-RISC Study Group. Physical activity and insulin sensitivity: the RISC study. Diabetes 57 (2008), 2613–2618.
-
(2008)
Diabetes
, vol.57
, pp. 2613-2618
-
-
Balkau, B.1
Mhamdi, L.2
Oppert, J.M.3
Nolan, J.4
Golay, A.5
Porcellati, F.6
Laakso, M.7
Ferrannini, E.8
-
4
-
-
0029062239
-
Skeletal muscle metabolism during short duration high-intensity exercise: influence of creatine supplementation
-
Balsom, P.D., Söderlund, K., Sjödin, B., Ekblom, B., Skeletal muscle metabolism during short duration high-intensity exercise: influence of creatine supplementation. Acta Physiol. Scand. 154 (1995), 303–310.
-
(1995)
Acta Physiol. Scand.
, vol.154
, pp. 303-310
-
-
Balsom, P.D.1
Söderlund, K.2
Sjödin, B.3
Ekblom, B.4
-
5
-
-
84947562163
-
Stratification of hepatocellular carcinoma patients based on acetate utilization
-
Björnson, E., Mukhopadhyay, B., Asplund, A., Pristovsek, N., Cinar, R., Romeo, S., Uhlen, M., Kunos, G., Nielsen, J., Mardinoglu, A., Stratification of hepatocellular carcinoma patients based on acetate utilization. Cell Rep. 13 (2015), 2014–2026.
-
(2015)
Cell Rep.
, vol.13
, pp. 2014-2026
-
-
Björnson, E.1
Mukhopadhyay, B.2
Asplund, A.3
Pristovsek, N.4
Cinar, R.5
Romeo, S.6
Uhlen, M.7
Kunos, G.8
Nielsen, J.9
Mardinoglu, A.10
-
6
-
-
84892788440
-
Constraint-based models predict metabolic and associated cellular functions
-
Bordbar, A., Monk, J.M., King, Z.A., Palsson, B.O., Constraint-based models predict metabolic and associated cellular functions. Nat. Rev. Genet. 15 (2014), 107–120.
-
(2014)
Nat. Rev. Genet.
, vol.15
, pp. 107-120
-
-
Bordbar, A.1
Monk, J.M.2
King, Z.A.3
Palsson, B.O.4
-
7
-
-
84941879755
-
Short-chain fatty acids in control of body weight and insulin sensitivity
-
Canfora, E.E., Jocken, J.W., Blaak, E.E., Short-chain fatty acids in control of body weight and insulin sensitivity. Nat. Rev. Endocrinol. 11 (2015), 577–591.
-
(2015)
Nat. Rev. Endocrinol.
, vol.11
, pp. 577-591
-
-
Canfora, E.E.1
Jocken, J.W.2
Blaak, E.E.3
-
8
-
-
0021702388
-
Is glycosylation in the liver needed for insulin binding, processing, and action? Evidence for heterogeneity
-
Caro, J.F., Cecchin, F., Sinha, M.K., Is glycosylation in the liver needed for insulin binding, processing, and action? Evidence for heterogeneity. J. Biol. Chem. 259 (1984), 12810–12816.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 12810-12816
-
-
Caro, J.F.1
Cecchin, F.2
Sinha, M.K.3
-
9
-
-
78651332286
-
Pathway Commons, a web resource for biological pathway data
-
Cerami, E.G., Gross, B.E., Demir, E., Rodchenkov, I., Babur, O., Anwar, N., Schultz, N., Bader, G.D., Sander, C., Pathway Commons, a web resource for biological pathway data. Nucleic Acids Res. 39 (2011), D685–D690.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D685-D690
-
-
Cerami, E.G.1
Gross, B.E.2
Demir, E.3
Rodchenkov, I.4
Babur, O.5
Anwar, N.6
Schultz, N.7
Bader, G.D.8
Sander, C.9
-
10
-
-
30044449116
-
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)
-
Crawford, G.E., Holt, I.E., Whittle, J., Webb, B.D., Tai, D., Davis, S., Margulies, E.H., Chen, Y., Bernat, J.A., Ginsburg, D., et al. Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS). Genome Res. 16 (2006), 123–131.
-
(2006)
Genome Res.
, vol.16
, pp. 123-131
-
-
Crawford, G.E.1
Holt, I.E.2
Whittle, J.3
Webb, B.D.4
Tai, D.5
Davis, S.6
Margulies, E.H.7
Chen, Y.8
Bernat, J.A.9
Ginsburg, D.10
-
11
-
-
0035802224
-
Studies of mannose metabolism and effects of long-term mannose ingestion in the mouse
-
Davis, J.A., Freeze, H.H., Studies of mannose metabolism and effects of long-term mannose ingestion in the mouse. Biochim. Biophys. Acta 1528 (2001), 116–126.
-
(2001)
Biochim. Biophys. Acta
, vol.1528
, pp. 116-126
-
-
Davis, J.A.1
Freeze, H.H.2
-
12
-
-
77955505357
-
Protein-protein interactions essentials: key concepts to building and analyzing interactome networks
-
De Las Rivas, J., Fontanillo, C., Protein-protein interactions essentials: key concepts to building and analyzing interactome networks. PLoS Comput. Biol., 6, 2010, e1000807.
-
(2010)
PLoS Comput. Biol.
, vol.6
, pp. e1000807
-
-
De Las Rivas, J.1
Fontanillo, C.2
-
13
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 489 (2012), 57–74.
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
14
-
-
84893276590
-
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics
-
Fagerberg, L., Hallström, B.M., Oksvold, P., Kampf, C., Djureinovic, D., Odeberg, J., Habuka, M., Tahmasebpoor, S., Danielsson, A., Edlund, K., et al. Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics. Mol. Cell. Proteomics 13 (2014), 397–406.
-
(2014)
Mol. Cell. Proteomics
, vol.13
, pp. 397-406
-
-
Fagerberg, L.1
Hallström, B.M.2
Oksvold, P.3
Kampf, C.4
Djureinovic, D.5
Odeberg, J.6
Habuka, M.7
Tahmasebpoor, S.8
Danielsson, A.9
Edlund, K.10
-
15
-
-
77956293821
-
alpha-Hydroxybutyrate is an early biomarker of insulin resistance and glucose intolerance in a nondiabetic population
-
Gall, W.E., Beebe, K., Lawton, K.A., Adam, K.P., Mitchell, M.W., Nakhle, P.J., Ryals, J.A., Milburn, M.V., Nannipieri, M., Camastra, S., et al., RISC Study Group. alpha-Hydroxybutyrate is an early biomarker of insulin resistance and glucose intolerance in a nondiabetic population. PLoS ONE, 5, 2010, e10883.
-
(2010)
PLoS ONE
, vol.5
, pp. e10883
-
-
Gall, W.E.1
Beebe, K.2
Lawton, K.A.3
Adam, K.P.4
Mitchell, M.W.5
Nakhle, P.J.6
Ryals, J.A.7
Milburn, M.V.8
Nannipieri, M.9
Camastra, S.10
-
16
-
-
84865739425
-
Architecture of the human regulatory network derived from ENCODE data
-
Gerstein, M.B., Kundaje, A., Hariharan, M., Landt, S.G., Yan, K.K., Cheng, C., Mu, X.J., Khurana, E., Rozowsky, J., Alexander, R., et al. Architecture of the human regulatory network derived from ENCODE data. Nature 489 (2012), 91–100.
-
(2012)
Nature
, vol.489
, pp. 91-100
-
-
Gerstein, M.B.1
Kundaje, A.2
Hariharan, M.3
Landt, S.G.4
Yan, K.K.5
Cheng, C.6
Mu, X.J.7
Khurana, E.8
Rozowsky, J.9
Alexander, R.10
-
17
-
-
1842844418
-
The EGIR-RISC STUDY (The European group for the study of insulin resistance: relationship between insulin sensitivity and cardiovascular disease risk): I. Methodology and objectives
-
Hills, S.A., Balkau, B., Coppack, S.W., Dekker, J.M., Mari, A., Natali, A., Walker, M., Ferrannini, E., EGIR-RISC Study Group. The EGIR-RISC STUDY (The European group for the study of insulin resistance: relationship between insulin sensitivity and cardiovascular disease risk): I. Methodology and objectives. Diabetologia 47 (2004), 566–570.
-
(2004)
Diabetologia
, vol.47
, pp. 566-570
-
-
Hills, S.A.1
Balkau, B.2
Coppack, S.W.3
Dekker, J.M.4
Mari, A.5
Natali, A.6
Walker, M.7
Ferrannini, E.8
-
18
-
-
84957575229
-
Genome-scale study reveals reduced metabolic adaptability in patients with non-alcoholic fatty liver disease
-
Hyötyläinen, T., Jerby, L., Petäjä, E.M., Mattila, I., Jäntti, S., Auvinen, P., Gastaldelli, A., Yki-Järvinen, H., Ruppin, E., Orešič, M., Genome-scale study reveals reduced metabolic adaptability in patients with non-alcoholic fatty liver disease. Nat. Commun., 7, 2016, 8994.
-
(2016)
Nat. Commun.
, vol.7
, pp. 8994
-
-
Hyötyläinen, T.1
Jerby, L.2
Petäjä, E.M.3
Mattila, I.4
Jäntti, S.5
Auvinen, P.6
Gastaldelli, A.7
Yki-Järvinen, H.8
Ruppin, E.9
Orešič, M.10
-
19
-
-
79952184341
-
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
-
John, S., Sabo, P.J., Thurman, R.E., Sung, M.H., Biddie, S.C., Johnson, T.A., Hager, G.L., Stamatoyannopoulos, J.A., Chromatin accessibility pre-determines glucocorticoid receptor binding patterns. Nat. Genet. 43 (2011), 264–268.
-
(2011)
Nat. Genet.
, vol.43
, pp. 264-268
-
-
John, S.1
Sabo, P.J.2
Thurman, R.E.3
Sung, M.H.4
Biddie, S.C.5
Johnson, T.A.6
Hager, G.L.7
Stamatoyannopoulos, J.A.8
-
20
-
-
77956696547
-
Insulin-sensitive obesity
-
Klöting, N., Fasshauer, M., Dietrich, A., Kovacs, P., Schön, M.R., Kern, M., Stumvoll, M., Blüher, M., Insulin-sensitive obesity. Am. J. Physiol. Endocrinol. Metab. 299 (2010), E506–E515.
-
(2010)
Am. J. Physiol. Endocrinol. Metab.
, vol.299
, pp. E506-E515
-
-
Klöting, N.1
Fasshauer, M.2
Dietrich, A.3
Kovacs, P.4
Schön, M.R.5
Kern, M.6
Stumvoll, M.7
Blüher, M.8
-
21
-
-
39049122631
-
Insulin sensitivity, insulin release and glucagon-like peptide-1 levels in persons with impaired fasting glucose and/or impaired glucose tolerance in the EUGENE2 study
-
Laakso, M., Zilinskaite, J., Hansen, T., Boesgaard, T.W., Vänttinen, M., Stancáková, A., Jansson, P.A., Pellmé, F., Holst, J.J., Kuulasmaa, T., et al., EUGENE2 Consortium. Insulin sensitivity, insulin release and glucagon-like peptide-1 levels in persons with impaired fasting glucose and/or impaired glucose tolerance in the EUGENE2 study. Diabetologia 51 (2008), 502–511.
-
(2008)
Diabetologia
, vol.51
, pp. 502-511
-
-
Laakso, M.1
Zilinskaite, J.2
Hansen, T.3
Boesgaard, T.W.4
Vänttinen, M.5
Stancáková, A.6
Jansson, P.A.7
Pellmé, F.8
Holst, J.J.9
Kuulasmaa, T.10
-
22
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M., Salzberg, S.L., Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, 2009, R25.
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
23
-
-
84921273143
-
From pathways to networks: connecting dots by establishing protein-protein interaction networks in signaling pathways using affinity purification and mass spectrometry
-
Li, X., Wang, W., Chen, J., From pathways to networks: connecting dots by establishing protein-protein interaction networks in signaling pathways using affinity purification and mass spectrometry. Proteomics 15 (2015), 188–202.
-
(2015)
Proteomics
, vol.15
, pp. 188-202
-
-
Li, X.1
Wang, W.2
Chen, J.3
-
24
-
-
0003939360
-
Introduction to Bivariate and Multivariate-Analysis
-
The University of Michigan
-
Lindeman, R.H., Merenda, P.F., Gold, R.Z., Introduction to Bivariate and Multivariate-Analysis. 1980, The University of Michigan.
-
(1980)
-
-
Lindeman, R.H.1
Merenda, P.F.2
Gold, R.Z.3
-
25
-
-
0023873370
-
Purification, properties, and evidence for two subtypes of human placenta hexokinase type I
-
Magnani, M., Stocchi, V., Serafini, G., Chiarantini, L., Fornaini, G., Purification, properties, and evidence for two subtypes of human placenta hexokinase type I. Arch. Biochem. Biophys. 260 (1988), 388–399.
-
(1988)
Arch. Biochem. Biophys.
, vol.260
, pp. 388-399
-
-
Magnani, M.1
Stocchi, V.2
Serafini, G.3
Chiarantini, L.4
Fornaini, G.5
-
26
-
-
84855955467
-
Systems medicine and metabolic modelling
-
Mardinoglu, A., Nielsen, J., Systems medicine and metabolic modelling. J. Intern. Med. 271 (2012), 142–154.
-
(2012)
J. Intern. Med.
, vol.271
, pp. 142-154
-
-
Mardinoglu, A.1
Nielsen, J.2
-
27
-
-
84920286423
-
New paradigms for metabolic modeling of human cells
-
Mardinoglu, A., Nielsen, J., New paradigms for metabolic modeling of human cells. Curr. Opin. Biotechnol. 34 (2015), 91–97.
-
(2015)
Curr. Opin. Biotechnol.
, vol.34
, pp. 91-97
-
-
Mardinoglu, A.1
Nielsen, J.2
-
28
-
-
84883787394
-
Integration of clinical data with a genome-scale metabolic model of the human adipocyte
-
Mardinoglu, A., Agren, R., Kampf, C., Asplund, A., Nookaew, I., Jacobson, P., Walley, A.J., Froguel, P., Carlsson, L.M., Uhlen, M., Nielsen, J., Integration of clinical data with a genome-scale metabolic model of the human adipocyte. Mol. Syst. Biol., 9, 2013, 649.
-
(2013)
Mol. Syst. Biol.
, vol.9
, pp. 649
-
-
Mardinoglu, A.1
Agren, R.2
Kampf, C.3
Asplund, A.4
Nookaew, I.5
Jacobson, P.6
Walley, A.J.7
Froguel, P.8
Carlsson, L.M.9
Uhlen, M.10
Nielsen, J.11
-
29
-
-
84898011025
-
Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease
-
Mardinoglu, A., Agren, R., Kampf, C., Asplund, A., Uhlen, M., Nielsen, J., Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease. Nat. Commun., 5, 2014, 3083.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3083
-
-
Mardinoglu, A.1
Agren, R.2
Kampf, C.3
Asplund, A.4
Uhlen, M.5
Nielsen, J.6
-
30
-
-
84908884352
-
Defining the human adipose tissue proteome to reveal metabolic alterations in obesity
-
Mardinoglu, A., Kampf, C., Asplund, A., Fagerberg, L., Hallström, B.M., Edlund, K., Blüher, M., Pontén, F., Uhlen, M., Nielsen, J., Defining the human adipose tissue proteome to reveal metabolic alterations in obesity. J. Proteome Res. 13 (2014), 5106–5119.
-
(2014)
J. Proteome Res.
, vol.13
, pp. 5106-5119
-
-
Mardinoglu, A.1
Kampf, C.2
Asplund, A.3
Fagerberg, L.4
Hallström, B.M.5
Edlund, K.6
Blüher, M.7
Pontén, F.8
Uhlen, M.9
Nielsen, J.10
-
31
-
-
84943328195
-
Extensive weight loss reveals distinct gene expression changes in human subcutaneous and visceral adipose tissue
-
Mardinoglu, A., Heiker, J.T., Gärtner, D., Björnson, E., Schön, M.R., Flehmig, G., Klöting, N., Krohn, K., Fasshauer, M., Stumvoll, M., et al. Extensive weight loss reveals distinct gene expression changes in human subcutaneous and visceral adipose tissue. Sci. Rep., 5, 2015, 14841.
-
(2015)
Sci. Rep.
, vol.5
, pp. 14841
-
-
Mardinoglu, A.1
Heiker, J.T.2
Gärtner, D.3
Björnson, E.4
Schön, M.R.5
Flehmig, G.6
Klöting, N.7
Krohn, K.8
Fasshauer, M.9
Stumvoll, M.10
-
32
-
-
84945903211
-
The gut microbiota modulates host amino acid and glutathione metabolism in mice
-
Mardinoglu, A., Shoaie, S., Bergentall, M., Ghaffari, P., Zhang, C., Larsson, E., Bäckhed, F., Nielsen, J., The gut microbiota modulates host amino acid and glutathione metabolism in mice. Mol. Syst. Biol., 11, 2015, 834.
-
(2015)
Mol. Syst. Biol.
, vol.11
, pp. 834
-
-
Mardinoglu, A.1
Shoaie, S.2
Bergentall, M.3
Ghaffari, P.4
Zhang, C.5
Larsson, E.6
Bäckhed, F.7
Nielsen, J.8
-
33
-
-
0032821965
-
Insulin sensitivity indices obtained from oral glucose tolerance testing: comparison with the euglycemic insulin clamp
-
Matsuda, M., DeFronzo, R.A., Insulin sensitivity indices obtained from oral glucose tolerance testing: comparison with the euglycemic insulin clamp. Diabetes Care 22 (1999), 1462–1470.
-
(1999)
Diabetes Care
, vol.22
, pp. 1462-1470
-
-
Matsuda, M.1
DeFronzo, R.A.2
-
34
-
-
84864147180
-
BEDOPS: high-performance genomic feature operations
-
Neph, S., Kuehn, M.S., Reynolds, A.P., Haugen, E., Thurman, R.E., Johnson, A.K., Rynes, E., Maurano, M.T., Vierstra, J., Thomas, S., et al. BEDOPS: high-performance genomic feature operations. Bioinformatics 28 (2012), 1919–1920.
-
(2012)
Bioinformatics
, vol.28
, pp. 1919-1920
-
-
Neph, S.1
Kuehn, M.S.2
Reynolds, A.P.3
Haugen, E.4
Thurman, R.E.5
Johnson, A.K.6
Rynes, E.7
Maurano, M.T.8
Vierstra, J.9
Thomas, S.10
-
35
-
-
84866361701
-
Circuitry and dynamics of human transcription factor regulatory networks
-
Neph, S., Stergachis, A.B., Reynolds, A., Sandstrom, R., Borenstein, E., Stamatoyannopoulos, J.A., Circuitry and dynamics of human transcription factor regulatory networks. Cell 150 (2012), 1274–1286.
-
(2012)
Cell
, vol.150
, pp. 1274-1286
-
-
Neph, S.1
Stergachis, A.B.2
Reynolds, A.3
Sandstrom, R.4
Borenstein, E.5
Stamatoyannopoulos, J.A.6
-
36
-
-
84865708757
-
An expansive human regulatory lexicon encoded in transcription factor footprints
-
Neph, S., Vierstra, J., Stergachis, A.B., Reynolds, A.P., Haugen, E., Vernot, B., Thurman, R.E., John, S., Sandstrom, R., Johnson, A.K., et al. An expansive human regulatory lexicon encoded in transcription factor footprints. Nature 489 (2012), 83–90.
-
(2012)
Nature
, vol.489
, pp. 83-90
-
-
Neph, S.1
Vierstra, J.2
Stergachis, A.B.3
Reynolds, A.P.4
Haugen, E.5
Vernot, B.6
Thurman, R.E.7
John, S.8
Sandstrom, R.9
Johnson, A.K.10
-
37
-
-
63449111894
-
A branched-chain amino acid-related metabolic signature that differentiates obese and lean humans and contributes to insulin resistance
-
Newgard, C.B., An, J., Bain, J.R., Muehlbauer, M.J., Stevens, R.D., Lien, L.F., Haqq, A.M., Shah, S.H., Arlotto, M., Slentz, C.A., et al. A branched-chain amino acid-related metabolic signature that differentiates obese and lean humans and contributes to insulin resistance. Cell Metab. 9 (2009), 311–326.
-
(2009)
Cell Metab.
, vol.9
, pp. 311-326
-
-
Newgard, C.B.1
An, J.2
Bain, J.R.3
Muehlbauer, M.J.4
Stevens, R.D.5
Lien, L.F.6
Haqq, A.M.7
Shah, S.H.8
Arlotto, M.9
Slentz, C.A.10
-
38
-
-
84930227327
-
Using genome-scale models to predict biological capabilities
-
O'Brien, E.J., Monk, J.M., Palsson, B.O., Using genome-scale models to predict biological capabilities. Cell 161 (2015), 971–987.
-
(2015)
Cell
, vol.161
, pp. 971-987
-
-
O'Brien, E.J.1
Monk, J.M.2
Palsson, B.O.3
-
39
-
-
84859208501
-
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
-
Orchard, S., Kerrien, S., Abbani, S., Aranda, B., Bhate, J., Bidwell, S., Bridge, A., Briganti, L., Brinkman, F.S., Cesareni, G., et al. Protein interaction data curation: the International Molecular Exchange (IMEx) consortium. Nat. Methods 9 (2012), 345–350.
-
(2012)
Nat. Methods
, vol.9
, pp. 345-350
-
-
Orchard, S.1
Kerrien, S.2
Abbani, S.3
Aranda, B.4
Bhate, J.5
Bidwell, S.6
Bridge, A.7
Briganti, L.8
Brinkman, F.S.9
Cesareni, G.10
-
40
-
-
0029984537
-
Mannose corrects altered N-glycosylation in carbohydrate-deficient glycoprotein syndrome fibroblasts
-
Panneerselvam, K., Freeze, H.H., Mannose corrects altered N-glycosylation in carbohydrate-deficient glycoprotein syndrome fibroblasts. J. Clin. Invest. 97 (1996), 1478–1487.
-
(1996)
J. Clin. Invest.
, vol.97
, pp. 1478-1487
-
-
Panneerselvam, K.1
Freeze, H.H.2
-
41
-
-
0030760044
-
Human fibroblasts prefer mannose over glucose as a source of mannose for N-glycosylation. Evidence for the functional importance of transported mannose
-
Panneerselvam, K., Etchison, J.R., Freeze, H.H., Human fibroblasts prefer mannose over glucose as a source of mannose for N-glycosylation. Evidence for the functional importance of transported mannose. J. Biol. Chem. 272 (1997), 23123–23129.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 23123-23129
-
-
Panneerselvam, K.1
Etchison, J.R.2
Freeze, H.H.3
-
42
-
-
14544268137
-
Uncovering transcriptional regulation of metabolism by using metabolic network topology
-
Patil, K.R., Nielsen, J., Uncovering transcriptional regulation of metabolism by using metabolic network topology. Proc. Natl. Acad. Sci. USA 102 (2005), 2685–2689.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 2685-2689
-
-
Patil, K.R.1
Nielsen, J.2
-
43
-
-
84921817799
-
Phenotypic robustness and the assortativity signature of human transcription factor networks
-
Pechenick, D.A., Payne, J.L., Moore, J.H., Phenotypic robustness and the assortativity signature of human transcription factor networks. PLoS Comput. Biol., 10, 2014, e1003780.
-
(2014)
PLoS Comput. Biol.
, vol.10
, pp. e1003780
-
-
Pechenick, D.A.1
Payne, J.L.2
Moore, J.H.3
-
44
-
-
84911474471
-
A proteome-scale map of the human interactome network
-
Rolland, T., Taşan, M., Charloteaux, B., Pevzner, S.J., Zhong, Q., Sahni, N., Yi, S., Lemmens, I., Fontanillo, C., Mosca, R., et al. A proteome-scale map of the human interactome network. Cell 159 (2014), 1212–1226.
-
(2014)
Cell
, vol.159
, pp. 1212-1226
-
-
Rolland, T.1
Taşan, M.2
Charloteaux, B.3
Pevzner, S.J.4
Zhong, Q.5
Sahni, N.6
Yi, S.7
Lemmens, I.8
Fontanillo, C.9
Mosca, R.10
-
45
-
-
0035141466
-
Leukotriene C(4) enhances the contraction of porcine tracheal smooth muscle through the activation of Y-27632, a rho kinase inhibitor, sensitive pathway
-
Setoguchi, H., Nishimura, J., Hirano, K., Takahashi, S., Kanaide, H., Leukotriene C(4) enhances the contraction of porcine tracheal smooth muscle through the activation of Y-27632, a rho kinase inhibitor, sensitive pathway. Br. J. Pharmacol. 132 (2001), 111–118.
-
(2001)
Br. J. Pharmacol.
, vol.132
, pp. 111-118
-
-
Setoguchi, H.1
Nishimura, J.2
Hirano, K.3
Takahashi, S.4
Kanaide, H.5
-
46
-
-
84938586730
-
Quantifying diet-induced metabolic changes of the human gut microbiome
-
Shoaie, S., Ghaffari, P., Kovatcheva-Datchary, P., Mardinoglu, A., Sen, P., Pujos-Guillot, E., de Wouters, T., Juste, C., Rizkalla, S., Chilloux, J., et al., MICRO-Obes Consortium. Quantifying diet-induced metabolic changes of the human gut microbiome. Cell Metab. 22 (2015), 320–331.
-
(2015)
Cell Metab.
, vol.22
, pp. 320-331
-
-
Shoaie, S.1
Ghaffari, P.2
Kovatcheva-Datchary, P.3
Mardinoglu, A.4
Sen, P.5
Pujos-Guillot, E.6
de Wouters, T.7
Juste, C.8
Rizkalla, S.9
Chilloux, J.10
-
47
-
-
84955483290
-
Fundamentals of protein interaction network mapping
-
Snider, J., Kotlyar, M., Saraon, P., Yao, Z., Jurisica, I., Stagljar, I., Fundamentals of protein interaction network mapping. Mol. Syst. Biol., 11, 2015, 848.
-
(2015)
Mol. Syst. Biol.
, vol.11
, pp. 848
-
-
Snider, J.1
Kotlyar, M.2
Saraon, P.3
Yao, Z.4
Jurisica, I.5
Stagljar, I.6
-
48
-
-
0042387690
-
Physiological changes in circulating mannose levels in normal, glucose-intolerant, and diabetic subjects
-
Sone, H., Shimano, H., Ebinuma, H., Takahashi, A., Yano, Y., Iida, K.T., Suzuki, H., Toyoshima, H., Kawakami, Y., Okuda, Y., et al. Physiological changes in circulating mannose levels in normal, glucose-intolerant, and diabetic subjects. Metabolism 52 (2003), 1019–1027.
-
(2003)
Metabolism
, vol.52
, pp. 1019-1027
-
-
Sone, H.1
Shimano, H.2
Ebinuma, H.3
Takahashi, A.4
Yano, Y.5
Iida, K.T.6
Suzuki, H.7
Toyoshima, H.8
Kawakami, Y.9
Okuda, Y.10
-
49
-
-
65549163338
-
Changes in insulin sensitivity and insulin release in relation to glycemia and glucose tolerance in 6,414 Finnish men
-
Stancáková, A., Javorský, M., Kuulasmaa, T., Haffner, S.M., Kuusisto, J., Laakso, M., Changes in insulin sensitivity and insulin release in relation to glycemia and glucose tolerance in 6,414 Finnish men. Diabetes 58 (2009), 1212–1221.
-
(2009)
Diabetes
, vol.58
, pp. 1212-1221
-
-
Stancáková, A.1
Javorský, M.2
Kuulasmaa, T.3
Haffner, S.M.4
Kuusisto, J.5
Laakso, M.6
-
50
-
-
84941051170
-
STRING v10: protein-protein interaction networks, integrated over the tree of life
-
Szklarczyk, D., Franceschini, A., Wyder, S., Forslund, K., Heller, D., Huerta-Cepas, J., Simonovic, M., Roth, A., Santos, A., Tsafou, K.P., et al. STRING v10: protein-protein interaction networks, integrated over the tree of life. Nucleic Acids Res. 43 (2015), D447–D452.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D447-D452
-
-
Szklarczyk, D.1
Franceschini, A.2
Wyder, S.3
Forslund, K.4
Heller, D.5
Huerta-Cepas, J.6
Simonovic, M.7
Roth, A.8
Santos, A.9
Tsafou, K.P.10
-
51
-
-
0024312193
-
Regulation of the biosynthesis of triacylglycerol, phosphatidylcholine and phosphatidylethanolamine in the liver
-
Tijburg, L.B., Geelen, M.J., van Golde, L.M., Regulation of the biosynthesis of triacylglycerol, phosphatidylcholine and phosphatidylethanolamine in the liver. Biochim. Biophys. Acta 1004 (1989), 1–19.
-
(1989)
Biochim. Biophys. Acta
, vol.1004
, pp. 1-19
-
-
Tijburg, L.B.1
Geelen, M.J.2
van Golde, L.M.3
-
52
-
-
84920269464
-
Proteomics. Tissue-based map of the human proteome
-
Uhlén, M., Fagerberg, L., Hallström, B.M., Lindskog, C., Oksvold, P., Mardinoglu, A., Sivertsson, Å., Kampf, C., Sjöstedt, E., Asplund, A., et al. Proteomics. Tissue-based map of the human proteome. Science, 347, 2015, 1260419.
-
(2015)
Science
, vol.347
, pp. 1260419
-
-
Uhlén, M.1
Fagerberg, L.2
Hallström, B.M.3
Lindskog, C.4
Oksvold, P.5
Mardinoglu, A.6
Sivertsson, Å.7
Kampf, C.8
Sjöstedt, E.9
Asplund, A.10
-
53
-
-
84964506792
-
Transcriptomics resources of human tissues and organs
-
Uhlén, M., Hallström, B.M., Lindskog, C., Mardinoglu, A., Pontén, F., Nielsen, J., Transcriptomics resources of human tissues and organs. Mol. Syst. Biol., 12, 2016, 862.
-
(2016)
Mol. Syst. Biol.
, vol.12
, pp. 862
-
-
Uhlén, M.1
Hallström, B.M.2
Lindskog, C.3
Mardinoglu, A.4
Pontén, F.5
Nielsen, J.6
-
54
-
-
84929276343
-
Proteome- and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes
-
Väremo, L., Scheele, C., Broholm, C., Mardinoglu, A., Kampf, C., Asplund, A., Nookaew, I., Uhlén, M., Pedersen, B.K., Nielsen, J., Proteome- and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes. Cell Rep. 11 (2015), 921–933.
-
(2015)
Cell Rep.
, vol.11
, pp. 921-933
-
-
Väremo, L.1
Scheele, C.2
Broholm, C.3
Mardinoglu, A.4
Kampf, C.5
Asplund, A.6
Nookaew, I.7
Uhlén, M.8
Pedersen, B.K.9
Nielsen, J.10
-
55
-
-
0029653395
-
Human beta-cell glucokinase. Dual role of Ser-151 in catalysis and hexose affinity
-
Xu, L.Z., Harrison, R.W., Weber, I.T., Pilkis, S.J., Human beta-cell glucokinase. Dual role of Ser-151 in catalysis and hexose affinity. J. Biol. Chem. 270 (1995), 9939–9946.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 9939-9946
-
-
Xu, L.Z.1
Harrison, R.W.2
Weber, I.T.3
Pilkis, S.J.4
-
56
-
-
84886670153
-
Model-based identification of drug targets that revert disrupted metabolism and its application to ageing
-
Yizhak, K., Gabay, O., Cohen, H., Ruppin, E., Model-based identification of drug targets that revert disrupted metabolism and its application to ageing. Nat. Commun., 4, 2013, 2632.
-
(2013)
Nat. Commun.
, vol.4
, pp. 2632
-
-
Yizhak, K.1
Gabay, O.2
Cohen, H.3
Ruppin, E.4
-
57
-
-
84930377006
-
Phenotype-based cell-specific metabolic modeling reveals metabolic liabilities of cancer
-
Yizhak, K., Gaude, E., Le Dévédec, S., Waldman, Y.Y., Stein, G.Y., van de Water, B., Frezza, C., Ruppin, E., Phenotype-based cell-specific metabolic modeling reveals metabolic liabilities of cancer. eLife, 3, 2014, e03641.
-
(2014)
eLife
, vol.3
, pp. e03641
-
-
Yizhak, K.1
Gaude, E.2
Le Dévédec, S.3
Waldman, Y.Y.4
Stein, G.Y.5
van de Water, B.6
Frezza, C.7
Ruppin, E.8
-
58
-
-
84907379295
-
A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration
-
Yizhak, K., Le Devedec, S.E., Rogkoti, V.M., Baenke, F., de Boer, V.C., Frezza, C., Schulze, A., van de Water, B., Ruppin, E., A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration. Mol. Syst. Biol., 10, 2014, 744.
-
(2014)
Mol. Syst. Biol.
, vol.10
, pp. 744
-
-
Yizhak, K.1
Le Devedec, S.E.2
Rogkoti, V.M.3
Baenke, F.4
de Boer, V.C.5
Frezza, C.6
Schulze, A.7
van de Water, B.8
Ruppin, E.9
-
59
-
-
84941656865
-
Logical transformation of genome-scale metabolic models for gene level applications and analysis
-
Zhang, C., Ji, B., Mardinoglu, A., Nielsen, J., Hua, Q., Logical transformation of genome-scale metabolic models for gene level applications and analysis. Bioinformatics 31 (2015), 2324–2331.
-
(2015)
Bioinformatics
, vol.31
, pp. 2324-2331
-
-
Zhang, C.1
Ji, B.2
Mardinoglu, A.3
Nielsen, J.4
Hua, Q.5
|