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Volumn 64, Issue 5, 2016, Pages 1743-1756

Massive rearrangements of cellular MicroRNA signatures are key drivers of hepatocyte dedifferentiation

Author keywords

[No Author keywords available]

Indexed keywords

ACRIFLAVINE; LONG UNTRANSLATED RNA; MICRORNA; POLYLYSINE; PROTEOME; RIBOSOME PROTEIN; SMALL NUCLEOLAR RNA; TRANSCRIPTOME;

EID: 84990068703     PISSN: 02709139     EISSN: 15273350     Source Type: Journal    
DOI: 10.1002/hep.28780     Document Type: Article
Times cited : (93)

References (49)
  • 1
  • 3
    • 39549111466 scopus 로고    scopus 로고
    • Identification of adult hepatic progenitor cells capable of repopulating injured rat liver
    • Yovchev MI, Grozdanov PN, Zhou H, Racherla H, Guha C, Dabeva MD, et al. Identification of adult hepatic progenitor cells capable of repopulating injured rat liver. Hepatology 2007;47:636–647.
    • (2007) Hepatology , vol.47 , pp. 636-647
    • Yovchev, M.I.1    Grozdanov, P.N.2    Zhou, H.3    Racherla, H.4    Guha, C.5    Dabeva, M.D.6
  • 4
    • 84877130536 scopus 로고    scopus 로고
    • Hepatic stem cell niches
    • Kordes C, Häussinger D. Hepatic stem cell niches. J Clin Invest 2013;123:1874–1880.
    • (2013) J Clin Invest , vol.123 , pp. 1874-1880
    • Kordes, C.1    Häussinger, D.2
  • 5
    • 0023442448 scopus 로고
    • A precursor-product relationship exists between oval cells and hepatocytes in rat liver
    • Evarts RP, Nagy P, Marsden E, Thorgeirsson SS. A precursor-product relationship exists between oval cells and hepatocytes in rat liver. Carcinogenesis 1987;8:1737–1740.
    • (1987) Carcinogenesis , vol.8 , pp. 1737-1740
    • Evarts, R.P.1    Nagy, P.2    Marsden, E.3    Thorgeirsson, S.S.4
  • 6
    • 84908355955 scopus 로고    scopus 로고
    • Evidence against a stem cell origin of new hepatocytes in a common mouse model of chronic liver injury
    • Schaub JR, Malato Y, Gormond C, Willenbring H. Evidence against a stem cell origin of new hepatocytes in a common mouse model of chronic liver injury. Cell Rep 2014;8:933–939.
    • (2014) Cell Rep , vol.8 , pp. 933-939
    • Schaub, J.R.1    Malato, Y.2    Gormond, C.3    Willenbring, H.4
  • 7
    • 84925092021 scopus 로고    scopus 로고
    • Adult hepatocytes are generated by self-duplication rather than stem cell differentiation
    • Yanger K, Knigin D, Zong Y, Maggs L, Gu G, Akiyama H, et al. Adult hepatocytes are generated by self-duplication rather than stem cell differentiation. Cell Stem Cell 2014;15:340–349.
    • (2014) Cell Stem Cell , vol.15 , pp. 340-349
    • Yanger, K.1    Knigin, D.2    Zong, Y.3    Maggs, L.4    Gu, G.5    Akiyama, H.6
  • 8
  • 10
    • 84863073374 scopus 로고    scopus 로고
    • Mature hepatocytes exhibit unexpected plasticity by direct dedifferentiation into liver progenitor cells in culture
    • Chen Y, Wong PP, Sjeklocha L, Steer CJ, Sahin MB. Mature hepatocytes exhibit unexpected plasticity by direct dedifferentiation into liver progenitor cells in culture. Hepatology 2012;55:563–574.
    • (2012) Hepatology , vol.55 , pp. 563-574
    • Chen, Y.1    Wong, P.P.2    Sjeklocha, L.3    Steer, C.J.4    Sahin, M.B.5
  • 11
    • 84881022740 scopus 로고    scopus 로고
    • Proteome-wide analyses of human hepatocytes during differentiation and dedifferentiation
    • Rowe C, Gerrard DT, Jenkins R, Berry A, Durkin K, Sundstrom L, et al. Proteome-wide analyses of human hepatocytes during differentiation and dedifferentiation. Hepatology 2013;58:799–809.
    • (2013) Hepatology , vol.58 , pp. 799-809
    • Rowe, C.1    Gerrard, D.T.2    Jenkins, R.3    Berry, A.4    Durkin, K.5    Sundstrom, L.6
  • 13
    • 84897128298 scopus 로고    scopus 로고
    • The noncoding RNA revolution—trashing old rules to forge new ones
    • Cech TR, Steitz JA. The noncoding RNA revolution—trashing old rules to forge new ones. Cell 2014;157:77–94.
    • (2014) Cell , vol.157 , pp. 77-94
    • Cech, T.R.1    Steitz, J.A.2
  • 14
    • 84924803749 scopus 로고    scopus 로고
    • The complexity of miRNA-mediated repression
    • Wilczynska A, Bushell M. The complexity of miRNA-mediated repression. Cell Death Differ 2015;22:22–33.
    • (2015) Cell Death Differ , vol.22 , pp. 22-33
    • Wilczynska, A.1    Bushell, M.2
  • 16
    • 79251512982 scopus 로고    scopus 로고
    • Expression profiles of miRNAs in human embryonic stem cells during hepatocyte differentiation
    • Kim N, Kim H, Jung I, Kim Y, Kim D, Han YM, et al. Expression profiles of miRNAs in human embryonic stem cells during hepatocyte differentiation. Hepatol Res 2011;41:170–183.
    • (2011) Hepatol Res , vol.41 , pp. 170-183
    • Kim, N.1    Kim, H.2    Jung, I.3    Kim, Y.4    Kim, D.5    Han, Y.M.6
  • 17
    • 0035890644 scopus 로고    scopus 로고
    • Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp
    • Clouet d'Orval B, Bortolin ML, Gaspin C, Bachellerie JP. Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp. Nucleic Acids Res 2011;29:4518–4529.
    • (2011) Nucleic Acids Res , vol.29 , pp. 4518-4529
    • Clouet d'Orval, B.1    Bortolin, M.L.2    Gaspin, C.3    Bachellerie, J.P.4
  • 18
    • 0036629250 scopus 로고    scopus 로고
    • rRNA modifications and ribosome function
    • Decatur WA, Fournier MJ. rRNA modifications and ribosome function. Trends Biochem Sci 2002;27:344–351.
    • (2002) Trends Biochem Sci , vol.27 , pp. 344-351
    • Decatur, W.A.1    Fournier, M.J.2
  • 20
    • 77952473473 scopus 로고    scopus 로고
    • The snoRNA MBII-52 (SNORD 115) is processed into smaller RNAs and regulates alternative splicing
    • Kishore S, Kanna A, Zhang Z, Hui J, Balwierz PJ, Stefan M, et al. The snoRNA MBII-52 (SNORD 115) is processed into smaller RNAs and regulates alternative splicing. Hum Mol Genet 2010;19:1153–1164.
    • (2010) Hum Mol Genet , vol.19 , pp. 1153-1164
    • Kishore, S.1    Kanna, A.2    Zhang, Z.3    Hui, J.4    Balwierz, P.J.5    Stefan, M.6
  • 23
    • 84875590101 scopus 로고    scopus 로고
    • Long noncoding RNAs: past, present, and future
    • Kung JT, Colognori D, Lee JT. Long noncoding RNAs: past, present, and future. Genetics 2013;193:651–669.
    • (2013) Genetics , vol.193 , pp. 651-669
    • Kung, J.T.1    Colognori, D.2    Lee, J.T.3
  • 25
    • 84880617636 scopus 로고    scopus 로고
    • WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013
    • Wang J, Duncan D, Shi Z, Zhang B. WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013. Nucleic Acids Res 2013;41(Web Server issue):W77–W83.
    • (2013) Nucleic Acids Res , vol.41 , Issue.Web Server issue , pp. W77-W83
    • Wang, J.1    Duncan, D.2    Shi, Z.3    Zhang, B.4
  • 26
    • 47749122616 scopus 로고    scopus 로고
    • Cytochrome p450 turnover: regulation of synthesis and degradation, methods for determining rates, and implications for the prediction of drug interactions
    • Yang J, Liao M, Shou M, Jamei M, Rowland Yeo K, Tucker GT, Rostami-Hodjegan A, et al. Cytochrome p450 turnover: regulation of synthesis and degradation, methods for determining rates, and implications for the prediction of drug interactions. Curr Drug Metab 2008;9:384–394.
    • (2008) Curr Drug Metab , vol.9 , pp. 384-394
    • Yang, J.1    Liao, M.2    Shou, M.3    Jamei, M.4    Rowland Yeo, K.5    Tucker, G.T.6    Rostami-Hodjegan, A.7
  • 28
    • 77955287613 scopus 로고    scopus 로고
    • Identification of small molecules that suppress microRNA function and reverse tumorigenesis
    • Watashi K, Yeung ML, Starost MF, Hosmane RS, Jeang KT. Identification of small molecules that suppress microRNA function and reverse tumorigenesis. J Biol Chem 2010;285:24707–24716.
    • (2010) J Biol Chem , vol.285 , pp. 24707-24716
    • Watashi, K.1    Yeung, M.L.2    Starost, M.F.3    Hosmane, R.S.4    Jeang, K.T.5
  • 30
    • 68149137764 scopus 로고    scopus 로고
    • Regulation of the cell cycle gene, BTG2, by miR-21 in human laryngeal carcinoma
    • Liu M, Wu H, Liu T, Li Y, Wang F, Wan H, et al. Regulation of the cell cycle gene, BTG2, by miR-21 in human laryngeal carcinoma. Cell Res 2009;19:828–837.
    • (2009) Cell Res , vol.19 , pp. 828-837
    • Liu, M.1    Wu, H.2    Liu, T.3    Li, Y.4    Wang, F.5    Wan, H.6
  • 31
    • 84910145739 scopus 로고    scopus 로고
    • MicroRNAs play a role in spontaneous recovery from acute liver failure
    • John K, Hadem J, Krech T, Wahl K, Manns MP, Dooley S, et al. MicroRNAs play a role in spontaneous recovery from acute liver failure. Hepatology 2014;60:1346–1355.
    • (2014) Hepatology , vol.60 , pp. 1346-1355
    • John, K.1    Hadem, J.2    Krech, T.3    Wahl, K.4    Manns, M.P.5    Dooley, S.6
  • 32
    • 52949127316 scopus 로고    scopus 로고
    • miR-221 controls CDKN1C/p57 and CDKN1B/p27 expression in human hepatocellular carcinoma
    • Fornari F, Gramantieri L, Ferracin M, Veronese A, Sabbioni S, Calin GA, et al. miR-221 controls CDKN1C/p57 and CDKN1B/p27 expression in human hepatocellular carcinoma. Oncogene 2008;27:5651–5661.
    • (2008) Oncogene , vol.27 , pp. 5651-5661
    • Fornari, F.1    Gramantieri, L.2    Ferracin, M.3    Veronese, A.4    Sabbioni, S.5    Calin, G.A.6
  • 34
    • 84865203418 scopus 로고    scopus 로고
    • Human CYP2C8 is post-transcriptionally regulated by microRNAs 103 and 107 in human liver
    • Zhang SY, Surapureddi S, Coulter S, Ferguson SS, Goldstein JA. Human CYP2C8 is post-transcriptionally regulated by microRNAs 103 and 107 in human liver. Mol Pharmacol 2012;82:529–540.
    • (2012) Mol Pharmacol , vol.82 , pp. 529-540
    • Zhang, S.Y.1    Surapureddi, S.2    Coulter, S.3    Ferguson, S.S.4    Goldstein, J.A.5
  • 35
    • 84919690585 scopus 로고    scopus 로고
    • Cell-type-resolved quantitative proteomics of murine liver
    • Azimifar SB, Nagaraj N, Cox J, Mann M. Cell-type-resolved quantitative proteomics of murine liver. Cell Metab 2014;20:1076–1087.
    • (2014) Cell Metab , vol.20 , pp. 1076-1087
    • Azimifar, S.B.1    Nagaraj, N.2    Cox, J.3    Mann, M.4
  • 36
    • 68649085702 scopus 로고    scopus 로고
    • Coordination of ribosomal protein and ribosomal RNA gene expression in response to TOR signaling
    • Xiao L, Grove A. Coordination of ribosomal protein and ribosomal RNA gene expression in response to TOR signaling. Curr Genomics 2009;10:198–205.
    • (2009) Curr Genomics , vol.10 , pp. 198-205
    • Xiao, L.1    Grove, A.2
  • 37
    • 0033005366 scopus 로고    scopus 로고
    • Eukaryotic initiation factor eIF2
    • Kimball SR. Eukaryotic initiation factor eIF2. Int J Biochem Cell Biol 1999;31:25–29.
    • (1999) Int J Biochem Cell Biol , vol.31 , pp. 25-29
    • Kimball, S.R.1
  • 38
    • 36849048778 scopus 로고    scopus 로고
    • Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression
    • Diederichs S, Haber DA. Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression. Cell 2007;131:1097–1108.
    • (2007) Cell , vol.131 , pp. 1097-1108
    • Diederichs, S.1    Haber, D.A.2
  • 40
    • 84871959206 scopus 로고    scopus 로고
    • Long-lived microRNA-Argonaute complexes in quiescent cells can be activated to regulate mitogenic responses
    • Olejniczak SH, La Rocca G, Gruber JJ, Thompson CB. Long-lived microRNA-Argonaute complexes in quiescent cells can be activated to regulate mitogenic responses. Proc Natl Acad Sci U S A 2013;110:157–162.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. 157-162
    • Olejniczak, S.H.1    La Rocca, G.2    Gruber, J.J.3    Thompson, C.B.4
  • 41
    • 0032956298 scopus 로고    scopus 로고
    • Epidermal growth factor- and hepatocyte growth factor-receptor activity in serum-free cultures of human hepatocytes
    • Runge DM, Runge D, Dorko K, Pisarov LA, Leckel K, Kostrubsky VE, et al. Epidermal growth factor- and hepatocyte growth factor-receptor activity in serum-free cultures of human hepatocytes. J Hepatol 1999;30:265–274.
    • (1999) J Hepatol , vol.30 , pp. 265-274
    • Runge, D.M.1    Runge, D.2    Dorko, K.3    Pisarov, L.A.4    Leckel, K.5    Kostrubsky, V.E.6
  • 42
    • 84923374447 scopus 로고    scopus 로고
    • Suppression of CYP2C9 by microRNA hsa-miR-128-3p in human liver cells and association with hepatocellular carcinoma
    • Yu D, Green B, Marrone A, Guo Y, Kadlubar S, Lin D, et al. Suppression of CYP2C9 by microRNA hsa-miR-128-3p in human liver cells and association with hepatocellular carcinoma. Sci Rep 2015;5:8534–8539.
    • (2015) Sci Rep , vol.5 , pp. 8534-8539
    • Yu, D.1    Green, B.2    Marrone, A.3    Guo, Y.4    Kadlubar, S.5    Lin, D.6
  • 43
    • 84896783551 scopus 로고    scopus 로고
    • The effect of microRNAs in the regulation of human CYP3A4: a systematic study using a mathematical model
    • Wei Z, Jiang S, Zhang Y, Wang X, Peng X, Meng C, et al. The effect of microRNAs in the regulation of human CYP3A4: a systematic study using a mathematical model. Sci Rep 2014;4:1–7.
    • (2014) Sci Rep , vol.4 , pp. 1-7
    • Wei, Z.1    Jiang, S.2    Zhang, Y.3    Wang, X.4    Peng, X.5    Meng, C.6
  • 44
    • 84905503012 scopus 로고    scopus 로고
    • Therapeutic targeting of microRNAs: current status and future challenges
    • Li Z, Rana TM. Therapeutic targeting of microRNAs: current status and future challenges. Nat Genet 2014;13:622–638.
    • (2014) Nat Genet , vol.13 , pp. 622-638
    • Li, Z.1    Rana, T.M.2
  • 45
  • 46
    • 33747312640 scopus 로고    scopus 로고
    • Molecular mechanisms underlying the dedifferentiation process of isolated hepatocytes and their cultures
    • Elaut G, Henkens T, Papeleu P, Snykers S, Vinken M, Vanhaecke T, Rogiers V, et al. Molecular mechanisms underlying the dedifferentiation process of isolated hepatocytes and their cultures. Curr Drug Metab 2006;7:629–660.
    • (2006) Curr Drug Metab , vol.7 , pp. 629-660
    • Elaut, G.1    Henkens, T.2    Papeleu, P.3    Snykers, S.4    Vinken, M.5    Vanhaecke, T.6    Rogiers, V.7
  • 47
    • 67650999336 scopus 로고    scopus 로고
    • Extracellular matrix modulates sensitivity of hepatocytes to fibroblastoid dedifferentiation and transforming growth factor β-induced apoptosis
    • Godoy P, Hengstler JG, Ilkavets I, Meyer C, Bachmann A, Müller A, et al. Extracellular matrix modulates sensitivity of hepatocytes to fibroblastoid dedifferentiation and transforming growth factor β-induced apoptosis. Hepatology 2009;49:2031–2043.
    • (2009) Hepatology , vol.49 , pp. 2031-2043
    • Godoy, P.1    Hengstler, J.G.2    Ilkavets, I.3    Meyer, C.4    Bachmann, A.5    Müller, A.6
  • 48
    • 84965172494 scopus 로고    scopus 로고
    • Characterization of primary human hepatocyte spheroids as a model system for drug-induced liver injury, liver function and disease
    • Bell CC, Hendriks DF, Moro SM, Ellis E, Walsh J, Renblom A, et al. Characterization of primary human hepatocyte spheroids as a model system for drug-induced liver injury, liver function and disease. Sci Rep 2016;6:25187.
    • (2016) Sci Rep , vol.6 , pp. 25187
    • Bell, C.C.1    Hendriks, D.F.2    Moro, S.M.3    Ellis, E.4    Walsh, J.5    Renblom, A.6
  • 49
    • 84874573555 scopus 로고    scopus 로고
    • T cell activation induces proteasomal degradation of Argonaute and rapid remodeling of the microRNA repertoire
    • Bronevetsky Y, Villarino AV, Eisley CJ, Barbeau R, Barczak AJ, Heinz GA, et al. T cell activation induces proteasomal degradation of Argonaute and rapid remodeling of the microRNA repertoire. J Exp Med 2013;210:417–432.
    • (2013) J Exp Med , vol.210 , pp. 417-432
    • Bronevetsky, Y.1    Villarino, A.V.2    Eisley, C.J.3    Barbeau, R.4    Barczak, A.J.5    Heinz, G.A.6


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