메뉴 건너뛰기




Volumn 13, Issue 119, 2016, Pages

Enhanced identification of synergistic and antagonistic emergent interactions among three or more drugs

Author keywords

Antibiotics; Drug resistance; Higher order interactions

Indexed keywords

ANTIBIOTICS; BIOASSAY; DRUG THERAPY;

EID: 84983087709     PISSN: 17425689     EISSN: 17425662     Source Type: Journal    
DOI: 10.1098/rsif.2016.0332     Document Type: Article
Times cited : (48)

References (50)
  • 1
    • 0442268112 scopus 로고    scopus 로고
    • A controlled trial of two nucleoside analogues plus indinavir in persons with human immunodeficiency virus infection and CD4 cell counts of 200 per cubic millimeter or less
    • Hammer SM et al. 1997 A controlled trial of two nucleoside analogues plus indinavir in persons with human immunodeficiency virus infection and CD4 cell counts of 200 per cubic millimeter or less. N. Engl. J. Med. 337, 725-733. (doi:10.1056/NEJM199709113371101)
    • (1997) N. Engl. J. Med. , vol.337 , pp. 725-733
    • Hammer, S.M.1
  • 2
    • 84866177379 scopus 로고    scopus 로고
    • 14-Day bactericidal activity of PA-824, bedaquiline, pyrazinamide, and moxifloxacin combinations: A randomised trial
    • Diacon AH et al. 2012 14-Day bactericidal activity of PA-824, bedaquiline, pyrazinamide, and moxifloxacin combinations: a randomised trial. Lancet 380, 986-993. (doi:10.1016/S0140-6736(12)61080-0)
    • (2012) Lancet , vol.380 , pp. 986-993
    • Diacon, A.H.1
  • 3
    • 84897398331 scopus 로고    scopus 로고
    • Synergistic interactions in two-drug and three-drug combinations (thymol, EDTA and vancomycin) against multi drug resistant bacteria including E. coli
    • Hamoud R, Zimmermann S, Reichling J, Wink M. 2014 Synergistic interactions in two-drug and three-drug combinations (thymol, EDTA and vancomycin) against multi drug resistant bacteria including E. coli. Phytomedicine 21, 443-447. (doi:10.1016/j.phymed.2013.10.016)
    • (2014) Phytomedicine , vol.21 , pp. 443-447
    • Hamoud, R.1    Zimmermann, S.2    Reichling, J.3    Wink, M.4
  • 5
    • 33747620519 scopus 로고    scopus 로고
    • Systems biology and combination therapy in the quest for clinical efficacy
    • Fitzgerald JB, Schoeberl B, Nielsen UB, Sorger PK. 2006 Systems biology and combination therapy in the quest for clinical efficacy. Nat. Chem. Biol. 2, 458-466. (doi:10.1038/nchembio817)
    • (2006) Nat. Chem. Biol. , vol.2 , pp. 458-466
    • Fitzgerald, J.B.1    Schoeberl, B.2    Nielsen, U.B.3    Sorger, P.K.4
  • 6
    • 84946384873 scopus 로고
    • The toxicity of poisons applied jointly
    • Bliss CI. 1939 The toxicity of poisons applied jointly. Ann. Appl.Biol. 2, 585-615.
    • (1939) Ann. Appl.Biol. , vol.2 , pp. 585-615
    • Bliss, C.I.1
  • 7
    • 79956079536 scopus 로고    scopus 로고
    • Antibiotic adjuvants: Multicomponent anti-infective strategies
    • Kalan L, Wright G. 2011 Antibiotic adjuvants: multicomponent anti-infective strategies. Expert Rev. Mol. Med. 13, e5. (doi:10.1017/S1462399410001766)
    • (2011) Expert Rev. Mol. Med. , vol.13 , pp. e5
    • Kalan, L.1    Wright, G.2
  • 8
    • 33645396484 scopus 로고    scopus 로고
    • Functional classification of drugs by properties of their pairwise interactions
    • Yeh P, Tschumi A, Kishony R. 2006 Functional classification of drugs by properties of their pairwise interactions. Nat. Genet. 38, 489-494. (doi:10.1038/ng1755)
    • (2006) Nat. Genet. , vol.38 , pp. 489-494
    • Yeh, P.1    Tschumi, A.2    Kishony, R.3
  • 9
    • 0034680167 scopus 로고    scopus 로고
    • Molecular mechanisms that confer antibacterial drug resistance
    • Walsh C. 2000 Molecular mechanisms that confer antibacterial drug resistance. Nature 406, 775-781. (doi:10.1038/35021219)
    • (2000) Nature , vol.406 , pp. 775-781
    • Walsh, C.1
  • 10
    • 7244245763 scopus 로고    scopus 로고
    • Antibiotics at the crossroads
    • Nathan C. 2004 Antibiotics at the crossroads. Nature 431, 899-902. (doi:10.1038/431899a)
    • (2004) Nature , vol.431 , pp. 899-902
    • Nathan, C.1
  • 12
    • 0001663843 scopus 로고
    • The problem of synergism and antagonism of combined drugs
    • Loewe S. 1953 The problem of synergism and antagonism of combined drugs. Arzneimittelforschung 3, 285-290.
    • (1953) Arzneimittelforschung , vol.3 , pp. 285-290
    • Loewe, S.1
  • 13
    • 0029036955 scopus 로고
    • The search for synergy: A critical review from a response surface perspective
    • Greco WR, Bravo G, Parsons JC. 1995 The search for synergy: a critical review from a response surface perspective. Pharmacol. Rev. 47, 331-385.
    • (1995) Pharmacol. Rev. , vol.47 , pp. 331-385
    • Greco, W.R.1    Bravo, G.2    Parsons, J.C.3
  • 15
    • 70350769418 scopus 로고    scopus 로고
    • Nonoptimal microbial response to antibiotics underlies suppressive drug interactions
    • Bollenbach T, Quan S, Chait R, Kishony R. 2009 Nonoptimal microbial response to antibiotics underlies suppressive drug interactions. Cell 139, 707-718. (doi:10.1016/j.cell.2009.10.025)
    • (2009) Cell , vol.139 , pp. 707-718
    • Bollenbach, T.1    Quan, S.2    Chait, R.3    Kishony, R.4
  • 16
    • 0001251342 scopus 로고
    • Lecture on the antagonism between the actions of active substances
    • Fraser TR. 1872 Lecture on the antagonism between the actions of active substances. Br. Med. J. 2, 485-487. (doi:10.1136/bmj.2.618.485)
    • (1872) Br. Med. J , vol.2 , pp. 485-487
    • Fraser, T.R.1
  • 17
    • 65649124513 scopus 로고    scopus 로고
    • Drug interactions and the evolution of antibiotic resistance
    • Yeh P, Hegreness M, Aiden A, Kishony R. 2009 Drug interactions and the evolution of antibiotic resistance. Nat. Rev. Microbiol. 7, 460-466. (doi:10.1038/nrmicro2133)
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 460-466
    • Yeh, P.1    Hegreness, M.2    Aiden, A.3    Kishony, R.4
  • 18
    • 11244297914 scopus 로고    scopus 로고
    • Modular epistasis in yeast metabolism
    • Segre D, DeLuna A, Church G, Kishony R. 2005 Modular epistasis in yeast metabolism. Nat. Genet. 37, 77-83. (doi:10.1038/ng1489)
    • (2005) Nat. Genet. , vol.37 , pp. 77-83
    • Segre, D.1    DeLuna, A.2    Church, G.3    Kishony, R.4
  • 19
    • 62849096643 scopus 로고    scopus 로고
    • Shadows of complexity: What biological networks reveal about epistasis and pleiotropy
    • Tyler AL, Asselbergs FW, Williams SM, Moore JH. 2009 Shadows of complexity: what biological networks reveal about epistasis and pleiotropy. Bioessays 31, 220-227. (doi:10.1002/bies.200800022)
    • (2009) Bioessays , vol.31 , pp. 220-227
    • Tyler, A.L.1    Asselbergs, F.W.2    Williams, S.M.3    Moore, J.H.4
  • 20
    • 77649182884 scopus 로고    scopus 로고
    • Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks
    • He X, Qian W, Wang Z, Li Y, Zhang J. 2010 Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks. Nat. Genet. 42, 272-276. (doi:10.1038/ng.524)
    • (2010) Nat. Genet. , vol.42 , pp. 272-276
    • He, X.1    Qian, W.2    Wang, Z.3    Li, Y.4    Zhang, J.5
  • 21
    • 33749242962 scopus 로고    scopus 로고
    • Epistasis correlates to genomic complexity
    • Sanjuán R, Elena SF. 2006 Epistasis correlates to genomic complexity. Proc. Natl Acad. Sci. USA 103, 14 402-14 405. (doi:10.1073/pnas.0604543103)
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 14402-14405
    • Sanjuán, R.1    Elena, S.F.2
  • 22
    • 84922439802 scopus 로고    scopus 로고
    • Pervasive degeneracy and epistasis in a protein-protein interface
    • Podgornaia AI, Laub MT. 2015 Pervasive degeneracy and epistasis in a protein-protein interface. Science 347, 673-677. (doi:10.1126/science.1257360)
    • (2015) Science , vol.347 , pp. 673-677
    • Podgornaia, A.I.1    Laub, M.T.2
  • 23
    • 0031880532 scopus 로고    scopus 로고
    • Emergent impacts of multiple predators on prey
    • Sih A, Englund G, Wooster D. 1998 Emergent impacts of multiple predators on prey. Trends Ecol. Evol. 13, 350-355. (doi:10.1016/S0169-5347(98)01437-2)
    • (1998) Trends Ecol. Evol. , vol.13 , pp. 350-355
    • Sih, A.1    Englund, G.2    Wooster, D.3
  • 24
    • 0037800367 scopus 로고    scopus 로고
    • Aggregate effects of multiple predator species on a shared prey
    • Sokol-Hessner L, Schmitz OJ. 2002 Aggregate effects of multiple predator species on a shared prey. Ecology 83, 2367-2372. (doi:10.1890/0012-9658(2002)083[2367:AEOMPS]2.0.CO;2)
    • (2002) Ecology , vol.83 , pp. 2367-2372
    • Sokol-Hessner, L.1    Schmitz, O.J.2
  • 25
    • 33645099899 scopus 로고    scopus 로고
    • Multiple predator effects in an intertidal food web
    • Son TC, Thiel M. 2006 Multiple predator effects in an intertidal food web. J. Anim. Ecol. 75, 25-32. (doi:10.1111/j.1365-2656.2005.01019.x)
    • (2006) J. Anim. Ecol. , vol.75 , pp. 25-32
    • Son, T.C.1    Thiel, M.2
  • 26
    • 27744574050 scopus 로고    scopus 로고
    • Effects of multiple predator species on green treefrog (Hyla cinerea) tadpoles
    • Gunzburger M, Travis J. 2005 Effects of multiple predator species on green treefrog (Hyla cinerea) tadpoles. Can. J. Zool. 83, 996-1002. (doi:10.1139/z05-093)
    • (2005) Can. J. Zool. , vol.83 , pp. 996-1002
    • Gunzburger, M.1    Travis, J.2
  • 27
    • 0027470263 scopus 로고
    • Multiple predator effects: Predicting combined functional response of stream fish and invertebrate predators
    • Soluk DA. 1993 Multiple predator effects: predicting combined functional response of stream fish and invertebrate predators. Ecology 74, 219-225. (doi:10.2307/1939516)
    • (1993) Ecology , vol.74 , pp. 219-225
    • Soluk, D.A.1
  • 28
    • 84864369297 scopus 로고    scopus 로고
    • Mechanism-independent method for predicting response to multidrug combinations in bacteria
    • Wood K, Nishida S, Sontag ED, Cluzel P. 2012 Mechanism-independent method for predicting response to multidrug combinations in bacteria. Proc. Natl Acad. Sci. USA 109, 12 254-12 259. (doi:10.1073/pnas.1201281109)
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 12254-12259
    • Wood, K.1    Nishida, S.2    Sontag, E.D.3    Cluzel, P.4
  • 29
    • 50549091013 scopus 로고    scopus 로고
    • A network model for the correlation between epistasis and genomic complexity
    • Sanjuán R, Nebot MR. 2008 A network model for the correlation between epistasis and genomic complexity. PLoS ONE 3, e2663. (doi:10.1371/journal.pone.0002663)
    • (2008) PLoS ONE , vol.3
    • Sanjuán, R.1    Nebot, M.R.2
  • 30
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL. 2000 One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl Acad. Sci. USA 97, 6640-6645. (doi:10.1073/pnas.120163297)
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 31
    • 31544450286 scopus 로고    scopus 로고
    • Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
    • 2006.0008
    • Baba T et al. 2006 Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2, 2006.0008. (doi:10.1038/msb4100050)
    • (2006) Mol. Syst. Biol. , vol.2
    • Baba, T.1
  • 32
    • 84920148375 scopus 로고    scopus 로고
    • Synergistic interactions of vancomycin with different antibiotics against Escherichia coli: Trimethoprim and nitrofurantoin display strong synergies with vancomycin against wild-type E. coli
    • Zhou A, Kang TM, Yuan J, Beppler C, Nguyen C, Mao Z, Nguyen MQ, Yeh P, Miller JH. 2015 Synergistic interactions of vancomycin with different antibiotics against Escherichia coli: trimethoprim and nitrofurantoin display strong synergies with vancomycin against wild-type E. coli. Antimicrob. Agents Chemother. 59, 276-281. (doi:10.1128/AAC.03502-14)
    • (2015) Antimicrob. Agents Chemother. , vol.59 , pp. 276-281
    • Zhou, A.1    Kang, T.M.2    Yuan, J.3    Beppler, C.4    Nguyen, C.5    Mao, Z.6    Nguyen, M.Q.7    Yeh, P.8    Miller, J.H.9
  • 33
    • 84889590334 scopus 로고    scopus 로고
    • Bacterial evolution of antibiotic hypersensitivity
    • Lázár V et al. 2013 Bacterial evolution of antibiotic hypersensitivity. Mol. Syst. Biol. 9, 700. (doi:10.1038/msb.2013.57)
    • (2013) Mol. Syst. Biol. , vol.9 , pp. 700
    • Lázár, V.1
  • 34
    • 84905403724 scopus 로고    scopus 로고
    • Antagonism between bacteriostatic and bactericidal antibiotics is prevalent
    • Ocampo PS et al. 2014 Antagonism between bacteriostatic and bactericidal antibiotics is prevalent. Antimicrob. Agents Chemother. 58, 4573-4582. (doi:10.1128/AAC.02463-14)
    • (2014) Antimicrob. Agents Chemother. , vol.58 , pp. 4573-4582
    • Ocampo, P.S.1
  • 35
    • 84907030238 scopus 로고    scopus 로고
    • Epistatic interactions among metabolic genes depend upon environmental conditions
    • Joshi CJ, Prasad A. 2014 Epistatic interactions among metabolic genes depend upon environmental conditions. Mol. Biosyst. 10, 2578-2589. (doi:10.1039/C4MB00181H)
    • (2014) Mol. Biosyst , vol.10 , pp. 2578-2589
    • Joshi, C.J.1    Prasad, A.2
  • 36
    • 10144244674 scopus 로고    scopus 로고
    • A trial comparing nucleoside monotherapy with combination therapy in HIV-infected adults with CD4 cell counts from 200 to 500 per cubic millimeter
    • AIDS Clinical Trials Group Study 175 Study Team
    • Hammer SM et al. 1996 A trial comparing nucleoside monotherapy with combination therapy in HIV-infected adults with CD4 cell counts from 200 to 500 per cubic millimeter. AIDS Clinical Trials Group Study 175 Study Team. N. Engl. J. Med. 335, 1081-1090. (doi:10.1056/NEJM199610103351501)
    • (1996) N. Engl. J. Med. , vol.335 , pp. 1081-1090
    • Hammer, S.M.1
  • 37
    • 84870562234 scopus 로고    scopus 로고
    • HIV therapy by a combination of broadly neutralizing antibodies in humanized mice
    • Klein F et al. 2012 HIV therapy by a combination of broadly neutralizing antibodies in humanized mice. Nature 492, 118-122. (doi:10.1038/nature11604)
    • (2012) Nature , vol.492 , pp. 118-122
    • Klein, F.1
  • 38
    • 33750253867 scopus 로고    scopus 로고
    • An updated systematic overview of triple combination therapy in antiretroviral-naive HIV-infected adults
    • Bartlett JA, Fath MJ, Demasi R, Hermes A, Quinn J, Mondou E, Rousseau F. 2006 An updated systematic overview of triple combination therapy in antiretroviral-naive HIV-infected adults. Aids 20, 2051-2064. (doi:10.1097/01.aids.0000247578.08449.ff)
    • (2006) Aids , vol.20 , pp. 2051-2064
    • Bartlett, J.A.1    Fath, M.J.2    Demasi, R.3    Hermes, A.4    Quinn, J.5    Mondou, E.6    Rousseau, F.7
  • 39
    • 2342537759 scopus 로고    scopus 로고
    • Triple-nucleoside regimens versus efavirenz-containing regimens for the initial treatment of HIV-1 infection
    • Gulick RM et al. 2004 Triple-nucleoside regimens versus efavirenz-containing regimens for the initial treatment of HIV-1 infection. N. Engl. J. Med. 350, 1850-1861. (doi:10.1056/NEJMoa031772)
    • (2004) N. Engl. J. Med. , vol.350 , pp. 1850-1861
    • Gulick, R.M.1
  • 40
    • 0034106517 scopus 로고    scopus 로고
    • Risks and benefits of replacing protease inhibitors by nevirapine in HIV-infected subjects under long-term successful triple combination therapy
    • Barreiro P, Soriano V, Blanco F, Casimiro C, de la Cruz JJ, González-Lahoz J. 2000 Risks and benefits of replacing protease inhibitors by nevirapine in HIV-infected subjects under long-term successful triple combination therapy. Aids 14, 807-812. (doi:10.1097/00002030-200005050-00006)
    • (2000) Aids , vol.14 , pp. 807-812
    • Barreiro, P.1    Soriano, V.2    Blanco, F.3    Casimiro, C.4    De La Cruz, J.J.5    González-Lahoz, J.6
  • 41
    • 34247277741 scopus 로고    scopus 로고
    • Antibiotic interactions that select against resistance
    • Chait R, Craney A, Kishony R. 2007 Antibiotic interactions that select against resistance. Nature 446, 668-671. (doi:10.1038/nature05685)
    • (2007) Nature , vol.446 , pp. 668-671
    • Chait, R.1    Craney, A.2    Kishony, R.3
  • 44
    • 77955480115 scopus 로고    scopus 로고
    • Optimal drug synergy in antimicrobial treatments
    • Torella JP, Chait R, Kishony R. 2010 Optimal drug synergy in antimicrobial treatments. PLoS Comput. Biol. 6, e1000796. (doi:10.1371/journal.pcbi.1000796)
    • (2010) PLoS Comput. Biol. , vol.6
    • Torella, J.P.1    Chait, R.2    Kishony, R.3
  • 45
    • 84873587763 scopus 로고    scopus 로고
    • Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production
    • Brynildsen MP, Winkler JA, Spina CS, MacDonald IC, Collins JJ. 2013 Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production. Nat. Biotechnol. 31, 160-165. (doi:10.1038/nbt.2458)
    • (2013) Nat. Biotechnol. , vol.31 , pp. 160-165
    • Brynildsen, M.P.1    Winkler, J.A.2    Spina, C.S.3    MacDonald, I.C.4    Collins, J.J.5
  • 46
    • 84941889409 scopus 로고    scopus 로고
    • Repurposing clinical molecule ebselen to combat drug resistant pathogens
    • Thangamani S, Younis W, Seleem MN. 2015 Repurposing clinical molecule ebselen to combat drug resistant pathogens. PLoS ONE 10, e0133877. (doi:10.1371/journal.pone.0133877)
    • (2015) PLoS ONE , vol.10
    • Thangamani, S.1    Younis, W.2    Seleem, M.N.3
  • 47
    • 84911462255 scopus 로고    scopus 로고
    • EZH2 inhibitor efficacy in non-Hodgkin's lymphoma does not require suppression of H3K27 monomethylation
    • Bradley WD et al. 2014 EZH2 inhibitor efficacy in non-Hodgkin's lymphoma does not require suppression of H3K27 monomethylation. Chem. Biol. 21, 1463-1475. (doi:10.1016/j.chembiol.2014.09.017)
    • (2014) Chem. Biol. , vol.21 , pp. 1463-1475
    • Bradley, W.D.1
  • 48
    • 34547487284 scopus 로고    scopus 로고
    • Combination of tunicamycin with anticancer drugs synergistically enhances their toxicity in multidrug-resistant human ovarian cystadenocarcinoma cells
    • Hiss DC, Gabriels GA, Folb PI. 2007 Combination of tunicamycin with anticancer drugs synergistically enhances their toxicity in multidrug-resistant human ovarian cystadenocarcinoma cells. Cancer Cell Int. 7, 1. (doi:10.1186/1475-2867-7-1)
    • (2007) Cancer Cell Int. , vol.7 , pp. 1
    • Hiss, D.C.1    Gabriels, G.A.2    Folb, P.I.3
  • 50
    • 52649104911 scopus 로고    scopus 로고
    • Price of anarchy in transportation networks: Efficiency and optimality control
    • Youn H, Gastner MT, Jeong H. 2008 Price of anarchy in transportation networks: efficiency and optimality control. Phys. Rev. Lett. 101, 128701. (doi:10.1103/PhysRevLett.101.128701)
    • (2008) Phys. Rev. Lett. , vol.101
    • Youn, H.1    Gastner, M.T.2    Jeong, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.