메뉴 건너뛰기




Volumn 198, Issue 16, 2016, Pages 2204-2218

Transcription of sialic acid catabolism genes in Corynebacterium glutamicum is subject to catabolite repression and control by the transcriptional repressor NanR

Author keywords

[No Author keywords available]

Indexed keywords

DEAMINASE; EPIMERASE; FRUCTOSE; FRUCTOSE 6 PHOSPHATE; GLUCOSAMINE 6 PHOSPHATE DEAMINASE; GLUCOSE; LYASE; N ACETYLGLUCOSAMINE 6 PHOSPHATE DEACETYLASE; N ACETYLMANNOSAMINE 6 PHOSPHATE EPIMERASE; N ACETYLMANNOSAMINE KINASE; N ACETYLNEURAMINIC ACID; N ACETYLNEURAMINIC LYASE; NANR PROTEIN; PHOSPHOTRANSFERASE; REPRESSOR PROTEIN; SIALIC ACID; UNCLASSIFIED DRUG; 2-ACETAMIDO-2-DEOXY-MANNOSE-6-PHOSPHATE; BACTERIAL DNA; DNA BINDING PROTEIN; GLUCOSAMINE; MANNOSE PHOSPHATE; N ACETYLGLUCOSAMINE; N-ACETYLGLUCOSAMINE 6-PHOSPHATE; PROTEIN BINDING;

EID: 84982843299     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00820-15     Document Type: Article
Times cited : (15)

References (91)
  • 1
    • 77953302727 scopus 로고    scopus 로고
    • Amino acid biosynthesis-pathways, regulation and metabolic engineering
    • Springer Verlag, Berlin, Germany
    • Wendisch VF. 2007. Amino acid biosynthesis-pathways, regulation and metabolic engineering. Springer Verlag, Berlin, Germany.
    • (2007)
    • Wendisch, V.F.1
  • 2
    • 84864801619 scopus 로고    scopus 로고
    • Bio-based production of chemicals, materials and fuels-Corynebacterium glutamicum as versatile cell factory
    • Becker J, Wittmann C. 2012. Bio-based production of chemicals, materials and fuels-Corynebacterium glutamicum as versatile cell factory. Curr Opin Biotechnol 23:631-640. http://dx.doi.org/10.1016/j.copbio.2011.11.012.
    • (2012) Curr Opin Biotechnol , vol.23 , pp. 631-640
    • Becker, J.1    Wittmann, C.2
  • 3
    • 84938950996 scopus 로고    scopus 로고
    • Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products
    • Heider SA, Wendisch VF. 2015. Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products. Biotechnol J 10:1170-1184. http://dx.doi.org/10.1002/biot.201400590.
    • (2015) Biotechnol J , vol.10 , pp. 1170-1184
    • Heider, S.A.1    Wendisch, V.F.2
  • 4
    • 84902096405 scopus 로고    scopus 로고
    • Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development
    • Wendisch VF. 2014. Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development. Curr Opin Biotechnol 30C:51-58.
    • (2014) Curr Opin Biotechnol , vol.30C , pp. 51-58
    • Wendisch, V.F.1
  • 5
    • 84873978248 scopus 로고    scopus 로고
    • Bio-based production of organic acids with Corynebacterium glutamicum
    • Wieschalka S, Blombach B, Bott M, Eikmanns BJ. 2013. Bio-based production of organic acids with Corynebacterium glutamicum. Microb Biotechnol 6:87-102. http://dx.doi.org/10.1111/1751-7915.12013.
    • (2013) Microb Biotechnol , vol.6 , pp. 87-102
    • Wieschalka, S.1    Blombach, B.2    Bott, M.3    Eikmanns, B.J.4
  • 6
    • 52649172346 scopus 로고    scopus 로고
    • Regulation of carbon metabolism in Corynebacterium glutamicum, p 155-182
    • Burkovski A (ed), Caister Acadeic Press, Norfolk, United Kingdom
    • Arndt A, Eikmanns BJ. 2008. Regulation of carbon metabolism in Corynebacterium glutamicum, p 155-182. In Burkovski A (ed), Corynebacteria: genomics and molecuar biology. Caister Acadeic Press, Norfolk, United Kingdom.
    • (2008) Corynebacteria: genomics and molecuar biology
    • Arndt, A.1    Eikmanns, B.J.2
  • 7
    • 77952889716 scopus 로고    scopus 로고
    • Carbohydrate metabolism in Coryne-bacterium glutamicum and applications for the metabolic engineering of L-lysine production strains
    • Blombach B, Seibold GM. 2010. Carbohydrate metabolism in Coryne-bacterium glutamicum and applications for the metabolic engineering of L-lysine production strains. Appl Microbiol Biotechnol 86:1313-1322. http://dx.doi.org/10.1007/s00253-010-2537-z.
    • (2010) Appl Microbiol Biotechnol , vol.86 , pp. 1313-1322
    • Blombach, B.1    Seibold, G.M.2
  • 8
    • 85019421199 scopus 로고    scopus 로고
    • Engineering of Corynebacterium glutamicum for growth and production of L-ornithine, L-lysine, and lycopene from hexuronic acids
    • Hadiati A, Krahn I, Lindner SN, Wendisch VF. 2015. Engineering of Corynebacterium glutamicum for growth and production of L-ornithine, L-lysine, and lycopene from hexuronic acids. Bioresources Bioprocessing 1:25.
    • (2015) Bioresources Bioprocessing , vol.1 , pp. 25
    • Hadiati, A.1    Krahn, I.2    Lindner, S.N.3    Wendisch, V.F.4
  • 9
    • 33646678414 scopus 로고    scopus 로고
    • Engineering of a xylose metabolic pathway in Corynebacterium glutamicum
    • Kawaguchi H, Vertes AA, Okino S, Inui M, Yukawa H. 2006. Engineering of a xylose metabolic pathway in Corynebacterium glutamicum. Appl Environ Microbiol 72:3418-3428. http://dx.doi.org/10.1128/AEM.72.5.3418-3428.2006.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 3418-3428
    • Kawaguchi, H.1    Vertes, A.A.2    Okino, S.3    Inui, M.4    Yukawa, H.5
  • 11
    • 54949135760 scopus 로고    scopus 로고
    • Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum
    • Rittmann D, Lindner SN, Wendisch VF. 2008. Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum. Appl Environ Microbiol 74:6216-6222. http://dx.doi.org/10.1128/AEM.00963-08.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 6216-6222
    • Rittmann, D.1    Lindner, S.N.2    Wendisch, V.F.3
  • 12
    • 33745210153 scopus 로고    scopus 로고
    • Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: growth and lysine production
    • Seibold G, Auchter M, Berens S, Kalinowski J, Eikmanns BJ. 2006. Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: growth and lysine production. J Biotechnol 124:381-391. http://dx.doi.org/10.1016/j.jbiotec.2005.12.027.
    • (2006) J Biotechnol , vol.124 , pp. 381-391
    • Seibold, G.1    Auchter, M.2    Berens, S.3    Kalinowski, J.4    Eikmanns, B.J.5
  • 13
    • 0027146142 scopus 로고
    • Batch kinetics of Corynebacterium glutamicum during growth on various carbon substrates- use of substrate mixtures to localize metabolic bottlenecks
    • Cocaign M, Monnet C, Lindley ND. 1993. Batch kinetics of Corynebacterium glutamicum during growth on various carbon substrates- use of substrate mixtures to localize metabolic bottlenecks. Appl Microbiol Biotechnol 40:526-530.
    • (1993) Appl Microbiol Biotechnol , vol.40 , pp. 526-530
    • Cocaign, M.1    Monnet, C.2    Lindley, N.D.3
  • 14
    • 0034115397 scopus 로고    scopus 로고
    • Quantitative determination of metabolic fluxes during coutilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose
    • Wendisch VF, de Graaf AA, Sahm H, Eikmanns BJ. 2000. Quantitative determination of metabolic fluxes during coutilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose. J Bacteriol 182:3088-3096. http://dx.doi.org/10.1128/JB.182.11.3088-3096.2000.
    • (2000) J Bacteriol , vol.182 , pp. 3088-3096
    • Wendisch, V.F.1    de Graaf, A.A.2    Sahm, H.3    Eikmanns, B.J.4
  • 15
    • 76149090497 scopus 로고    scopus 로고
    • Increased glucose utilization in Corynebacterium glutamicum by use of maltose, and its application for the improvement of L-valine productivity
    • Krause FS, Henrich A, Blombach B, Krämer R, Eikmanns BJ, Seibold GM. 2010. Increased glucose utilization in Corynebacterium glutamicum by use of maltose, and its application for the improvement of L-valine productivity. Appl Environ Microbiol 76:370-374. http://dx.doi.org/10.1128/AEM.01553-09.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 370-374
    • Krause, F.S.1    Henrich, A.2    Blombach, B.3    Krämer, R.4    Eikmanns, B.J.5    Seibold, G.M.6
  • 16
    • 37349123170 scopus 로고    scopus 로고
    • Coordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2
    • Frunzke J, Engels V, Hasenbein S, Gatgens C, Bott M. 2008. Coordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2. Mol Microbiol 67:305-322.
    • (2008) Mol Microbiol , vol.67 , pp. 305-322
    • Frunzke, J.1    Engels, V.2    Hasenbein, S.3    Gatgens, C.4    Bott, M.5
  • 17
    • 61449214227 scopus 로고    scopus 로고
    • Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032
    • Nentwich SS, Brinkrolf K, Gaigalat L, Huser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J. 2009. Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032. Microbiology 155:150-164. http://dx.doi.org/10.1099/mic.0.020388-0.
    • (2009) Microbiology , vol.155 , pp. 150-164
    • Nentwich, S.S.1    Brinkrolf, K.2    Gaigalat, L.3    Huser, A.T.4    Rey, D.A.5    Mohrbach, T.6    Marin, K.7    Pühler, A.8    Tauch, A.9    Kalinowski, J.10
  • 18
    • 0030955461 scopus 로고    scopus 로고
    • Simultaneous consumption of glucose and fructose from sugar mixtures during botch growth of Corynebacterium glutamicum
    • Dominguez H, Cocaign Bousquet M, Lindley ND. 1997. Simultaneous consumption of glucose and fructose from sugar mixtures during botch growth of Corynebacterium glutamicum. Appl Microbiol Biotechnol 47: 600-603. http://dx.doi.org/10.1007/s002530050980.
    • (1997) Appl Microbiol Biotechnol , vol.47 , pp. 600-603
    • Dominguez, H.1    Cocaign Bousquet, M.2    Lindley, N.D.3
  • 19
    • 35048822557 scopus 로고    scopus 로고
    • The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression
    • Arndt A, Eikmanns BJ. 2007. The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression. J Bacteriol 189:7408-7416. http://dx.doi.org/10.1128/JB.00791-07.
    • (2007) J Bacteriol , vol.189 , pp. 7408-7416
    • Arndt, A.1    Eikmanns, B.J.2
  • 20
    • 0025637263 scopus 로고
    • Uptake of glutamate in Corynebacterium glutamicum. 1. Kinetic properties and regulation by internal pH and potassium
    • Krämer R, Lambert C, Hoischen C, Ebbighausen H. 1990. Uptake of glutamate in Corynebacterium glutamicum. 1. Kinetic properties and regulation by internal pH and potassium. Eur J Biochem 194:929-935.
    • (1990) Eur J Biochem , vol.194 , pp. 929-935
    • Krämer, R.1    Lambert, C.2    Hoischen, C.3    Ebbighausen, H.4
  • 21
    • 0028944577 scopus 로고
    • Structure of the gluABCD cluster encoding the glutamate uptake system of Corynebacterium glutamicum
    • Kronemeyer W, Peekhaus N, Krämer R, Sahm H, Eggeling L. 1995. Structure of the gluABCD cluster encoding the glutamate uptake system of Corynebacterium glutamicum. J Bacteriol 177:1152-1158.
    • (1995) J Bacteriol , vol.177 , pp. 1152-1158
    • Kronemeyer, W.1    Peekhaus, N.2    Krämer, R.3    Sahm, H.4    Eggeling, L.5
  • 22
    • 84867996528 scopus 로고    scopus 로고
    • Sialic acid utilization by the soil bacterium Corynebacterium glutamicum
    • Gruteser N, Marin K, Krämer R, Thomas GH. 2012. Sialic acid utilization by the soil bacterium Corynebacterium glutamicum. FEMS Microbiol Lett 336:131-138. http://dx.doi.org/10.1111/j.1574-6968.2012.02663.x.
    • (2012) FEMS Microbiol Lett , vol.336 , pp. 131-138
    • Gruteser, N.1    Marin, K.2    Krämer, R.3    Thomas, G.H.4
  • 25
    • 34247565506 scopus 로고    scopus 로고
    • Glycan-based interactions involving vertebrate sialic-acid-recognizing proteins
    • Varki A. 2007. Glycan-based interactions involving vertebrate sialic-acid-recognizing proteins. Nature 446:1023-1029. http://dx.doi.org/10.1038/nature05816.
    • (2007) Nature , vol.446 , pp. 1023-1029
    • Varki, A.1
  • 26
    • 48149090000 scopus 로고    scopus 로고
    • Sialic acids in human health and disease
    • Varki A. 2008. Sialic acids in human health and disease. Trends Mol Med 14:351-360. http://dx.doi.org/10.1016/j.molmed.2008.06.002.
    • (2008) Trends Mol Med , vol.14 , pp. 351-360
    • Varki, A.1
  • 27
    • 84876073836 scopus 로고    scopus 로고
    • Chapter 14. Sialic acids
    • Varki A, Cummings R, Esko J, Freeze H, Stanley P, Bertozzi C, Hart G, Etzler M (ed), 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Varki A, Schauer R. 2009. Chapter 14. Sialic acids. In Varki A, Cummings R, Esko J, Freeze H, Stanley P, Bertozzi C, Hart G, Etzler M (ed), Essentials of glycobiology, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (2009) Essentials of glycobiology
    • Varki, A.1    Schauer, R.2
  • 29
  • 30
    • 84940062118 scopus 로고    scopus 로고
    • Sialic acid catabolism drives intestinal inflammation and microbial dysbiosis in mice
    • Huang YL, Chassard C, Hausmann M, von Itzstein M, Hennet T. 2015. Sialic acid catabolism drives intestinal inflammation and microbial dysbiosis in mice. Nat Commun 6:8141. http://dx.doi.org/10.1038/ncomms9141.
    • (2015) Nat Commun , vol.6 , pp. 8141
    • Huang, Y.L.1    Chassard, C.2    Hausmann, M.3    von Itzstein, M.4    Hennet, T.5
  • 31
    • 84883785413 scopus 로고    scopus 로고
    • Unified theory of bacterial sialometabolism: how and why bacteria metabolize host sialic acids
    • Vimr ER. 2013. Unified theory of bacterial sialometabolism: how and why bacteria metabolize host sialic acids. ISRN Microbiol 2013:816713.
    • (2013) ISRN Microbiol , vol.2013 , pp. 816713
    • Vimr, E.R.1
  • 33
    • 84941276903 scopus 로고    scopus 로고
    • NanR, a transcriptional regulator that binds to the promoters of genes involved in sialic acid metabolism in the anaerobic pathogen Clostridium perfringens
    • Therit B, Cheung JK, Rood JI, Melville SB. 2015. NanR, a transcriptional regulator that binds to the promoters of genes involved in sialic acid metabolism in the anaerobic pathogen Clostridium perfringens. PLoS One 10:e0133217. http://dx.doi.org/10.1371/journal.pone.0133217.
    • (2015) PLoS One , vol.10 , pp. e0133217
    • Therit, B.1    Cheung, J.K.2    Rood, J.I.3    Melville, S.B.4
  • 34
    • 84927792227 scopus 로고    scopus 로고
    • Sialic acid-mediated gene expression in Streptococcus pneumoniae and the role of NanR as a transcriptional activator of the nan gene cluster
    • Afzal M, Shafeeq S, Ahmed H, Kuipers OP. 2015. Sialic acid-mediated gene expression in Streptococcus pneumoniae and the role of NanR as a transcriptional activator of the nan gene cluster. Appl Environ Microbiol 81:3121-3131. http://dx.doi.org/10.1128/AEM.00499-15.
    • (2015) Appl Environ Microbiol , vol.81 , pp. 3121-3131
    • Afzal, M.1    Shafeeq, S.2    Ahmed, H.3    Kuipers, O.P.4
  • 35
    • 82555195573 scopus 로고    scopus 로고
    • On sialic acid transport and utilization by Vibrio cholerae
    • discussion, 3254-3255
    • Thomas GH, Boyd EF. 2011. On sialic acid transport and utilization by Vibrio cholerae. Microbiology 157:3253-3254; discussion, 3254-3255. http://dx.doi.org/10.1099/mic.0.054692-0.
    • (2011) Microbiology , vol.157 , pp. 3253-3254
    • Thomas, G.H.1    Boyd, E.F.2
  • 36
    • 84856285587 scopus 로고    scopus 로고
    • The membrane proteins SiaQ and SiaM form an essential stoichiometric complex in the sialic acid tripartite ATP-independent periplasmic (TRAP) transporter SiaPQM (VC1777-1779) from Vibrio cholerae
    • Mulligan C, Leech AP, Kelly DJ, Thomas GH. 2012. The membrane proteins SiaQ and SiaM form an essential stoichiometric complex in the sialic acid tripartite ATP-independent periplasmic (TRAP) transporter SiaPQM (VC1777-1779) from Vibrio cholerae. J Biol Chem 287:3598-3608. http://dx.doi.org/10.1074/jbc.M111.281030.
    • (2012) J Biol Chem , vol.287 , pp. 3598-3608
    • Mulligan, C.1    Leech, A.P.2    Kelly, D.J.3    Thomas, G.H.4
  • 39
    • 77956511533 scopus 로고    scopus 로고
    • Sialic acid transport and catabolism are cooperatively regulated by SiaR and CRP in nontypeable Haemophilus influenzae
    • Johnston JW, Shamsulddin H, Miller AF, Apicella MA. 2010. Sialic acid transport and catabolism are cooperatively regulated by SiaR and CRP in nontypeable Haemophilus influenzae. BMC Microbiol 10:240. http://dx.doi.org/10.1186/1471-2180-10-240.
    • (2010) BMC Microbiol , vol.10 , pp. 240
    • Johnston, J.W.1    Shamsulddin, H.2    Miller, A.F.3    Apicella, M.A.4
  • 40
    • 56349162600 scopus 로고    scopus 로고
    • Sialic acid metabolism and regulation by Haemophilus influenzae: potential novel antimicrobial therapies
    • Johnston JW, Apicella MA. 2008. Sialic acid metabolism and regulation by Haemophilus influenzae: potential novel antimicrobial therapies. Curr Infect Dis Rep 10:83-84. http://dx.doi.org/10.1007/s11908-008-0014-y.
    • (2008) Curr Infect Dis Rep , vol.10 , pp. 83-84
    • Johnston, J.W.1    Apicella, M.A.2
  • 41
    • 77949466273 scopus 로고    scopus 로고
    • Sialic acid mediated transcriptional modulation of a highly conserved sialometabolism gene cluster in Haemophilus influenzae and its effect on virulence
    • Jenkins GA, Figueira M, Kumar GA, Sweetman WA, Makepeace K, Pelton SI, Moxon R, Hood DW. 2010. Sialic acid mediated transcriptional modulation of a highly conserved sialometabolism gene cluster in Haemophilus influenzae and its effect on virulence. BMC Microbiol 10:48. http://dx.doi.org/10.1186/1471-2180-10-48.
    • (2010) BMC Microbiol , vol.10 , pp. 48
    • Jenkins, G.A.1    Figueira, M.2    Kumar, G.A.3    Sweetman, W.A.4    Makepeace, K.5    Pelton, S.I.6    Moxon, R.7    Hood, D.W.8
  • 42
    • 84880650413 scopus 로고    scopus 로고
    • Structural insights into the regulation of sialic acid catabolism by the Vibrio vulnificus transcriptional repressor NanR
    • Hwang J, Kim BS, Jang SY, Lim JG, You DJ, Jung HS, Oh TK, Lee JO, Choi SH, Kim MH. 2013. Structural insights into the regulation of sialic acid catabolism by the Vibrio vulnificus transcriptional repressor NanR. Proc Natl Acad Sci U S A 110:E2829-E2837. http://dx.doi.org/10.1073/pnas.1302859110.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. E2829-E2837
    • Hwang, J.1    Kim, B.S.2    Jang, S.Y.3    Lim, J.G.4    You, D.J.5    Jung, H.S.6    Oh, T.K.7    Lee, J.O.8    Choi, S.H.9    Kim, M.H.10
  • 43
    • 81755189037 scopus 로고    scopus 로고
    • Cooperative regulation of the Vibrio vulnificus nan gene cluster by NanR protein, cAMP receptor protein, and N-acetylmannosamine 6-phosphate
    • Kim BS, Hwang J, Kim MH, Choi SH. 2011. Cooperative regulation of the Vibrio vulnificus nan gene cluster by NanR protein, cAMP receptor protein, and N-acetylmannosamine 6-phosphate. J Biol Chem 286: 40889-40899. http://dx.doi.org/10.1074/jbc.M111.300988.
    • (2011) J Biol Chem , vol.286 , pp. 40889-40899
    • Kim, B.S.1    Hwang, J.2    Kim, M.H.3    Choi, S.H.4
  • 44
    • 0041559751 scopus 로고    scopus 로고
    • Regulation of sialic acid catabolism by the DNA binding protein NanR in Escherichia coli
    • Kalivoda KA, Steenbergen SM, Vimr ER, Plumbridge J. 2003. Regulation of sialic acid catabolism by the DNA binding protein NanR in Escherichia coli. J Bacteriol 185:4806-4815. http://dx.doi.org/10.1128/JB.185.16.4806-4815.2003.
    • (2003) J Bacteriol , vol.185 , pp. 4806-4815
    • Kalivoda, K.A.1    Steenbergen, S.M.2    Vimr, E.R.3    Plumbridge, J.4
  • 45
    • 84885460745 scopus 로고    scopus 로고
    • Control of the Escherichia coli sialoregulon by transcriptional repressor NanR
    • Kalivoda KA, Steenbergen SM, Vimr ER. 2013. Control of the Escherichia coli sialoregulon by transcriptional repressor NanR. J Bacteriol 195:4689-4701. http://dx.doi.org/10.1128/JB.00692-13.
    • (2013) J Bacteriol , vol.195 , pp. 4689-4701
    • Kalivoda, K.A.1    Steenbergen, S.M.2    Vimr, E.R.3
  • 46
    • 84954290113 scopus 로고    scopus 로고
    • A GntR-type transcriptional repressor controls sialic acid utilization in Bifidobacterium breve UCC2003
    • Egan M, O'Connell Motherway M, van Sinderen D. 2015. A GntR-type transcriptional repressor controls sialic acid utilization in Bifidobacterium breve UCC2003. FEMS Microbiol Lett 362:1-9. http://dx.doi.org/10.1093/femsle/fnu056.
    • (2015) FEMS Microbiol Lett , vol.362 , pp. 1-9
    • Egan, M.1    O'Connell Motherway, M.2    van Sinderen, D.3
  • 48
    • 0003903343 scopus 로고    scopus 로고
    • Molecular cloning: a laboratory manual
    • 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Sambrook J, Russell DW. 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (2001)
    • Sambrook, J.1    Russell, D.W.2
  • 49
    • 0028031441 scopus 로고
    • Nucleotide sequence, expression and transcriptional analysis of the Corynebacterium glutamicum gltA gene encoding citrate synthase
    • Eikmanns BJ, Thum-Schmitz N, Eggeling L, Ludtke KU, Sahm H. 1994. Nucleotide sequence, expression and transcriptional analysis of the Corynebacterium glutamicum gltA gene encoding citrate synthase. Microbiology 140(Part 8):1817-1828.
    • (1994) Microbiology , vol.140 , pp. 1817-1828
    • Eikmanns, B.J.1    Thum-Schmitz, N.2    Eggeling, L.3    Ludtke, K.U.4    Sahm, H.5
  • 50
    • 0036835575 scopus 로고    scopus 로고
    • Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
    • Tauch A, Kirchner O, Loffler B, Gotker S, Pühler A, Kalinowski J. 2002. Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1. Curr Microbiol 45:362-367. http://dx.doi.org/10.1007/s00284-002-3728-3.
    • (2002) Curr Microbiol , vol.45 , pp. 362-367
    • Tauch, A.1    Kirchner, O.2    Loffler, B.3    Gotker, S.4    Pühler, A.5    Kalinowski, J.6
  • 51
    • 0028289983 scopus 로고
    • Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum
    • Schäfer A, Tauch A, Jäger W, Kalinowski J, Thierbach G, Pühler A. 1994. Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene 145:69-73. http://dx.doi.org/10.1016/0378-1119(94)90324-7.
    • (1994) Gene , vol.145 , pp. 69-73
    • Schäfer, A.1    Tauch, A.2    Jäger, W.3    Kalinowski, J.4    Thierbach, G.5    Pühler, A.6
  • 52
    • 34547815674 scopus 로고    scopus 로고
    • Plasmid vectors for testing in vivo promoter activities in Coryne-bacterium glutamicum and Rhodococcus erythropolis
    • Knoppová M, Phensaijai M, Vesely M, Zemanova M, Nesvera J, Patek M. 2007. Plasmid vectors for testing in vivo promoter activities in Coryne-bacterium glutamicum and Rhodococcus erythropolis. Curr Microbiol 55: 234-239. http://dx.doi.org/10.1007/s00284-007-0106-1.
    • (2007) Curr Microbiol , vol.55 , pp. 234-239
    • Knoppová, M.1    Phensaijai, M.2    Vesely, M.3    Zemanova, M.4    Nesvera, J.5    Patek, M.6
  • 53
    • 84876175392 scopus 로고    scopus 로고
    • Phosphotransferase system-mediated glucose uptake is repressed in phosphoglucoisomerase-deficient Corynebacterium glutamicum strains
    • Lindner SN, Petrov DP, Hagmann CT, Henrich A, Krämer R, Eikmanns BJ, Wendisch VF, Seibold GM. 2013. Phosphotransferase system-mediated glucose uptake is repressed in phosphoglucoisomerase-deficient Corynebacterium glutamicum strains. Appl Environ Microbiol 79:2588-2595. http://dx.doi.org/10.1128/AEM.03231-12.
    • (2013) Appl Environ Microbiol , vol.79 , pp. 2588-2595
    • Lindner, S.N.1    Petrov, D.P.2    Hagmann, C.T.3    Henrich, A.4    Krämer, R.5    Eikmanns, B.J.6    Wendisch, V.F.7    Seibold, G.M.8
  • 54
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli UK. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685. http://dx.doi.org/10.1038/227680a0.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 55
    • 0342545957 scopus 로고    scopus 로고
    • Osmosensor and osmoregulator properties of the betaine carrier BetP from Corynebacterium glutamicum in proteoliposomes
    • Rübenhagen R, Rönsch H, Jung H, Krämer R, Morbach S. 2000. Osmosensor and osmoregulator properties of the betaine carrier BetP from Corynebacterium glutamicum in proteoliposomes. J Biol Chem 275: 735-741. http://dx.doi.org/10.1074/jbc.275.2.735.
    • (2000) J Biol Chem , vol.275 , pp. 735-741
    • Rübenhagen, R.1    Rönsch, H.2    Jung, H.3    Krämer, R.4    Morbach, S.5
  • 56
    • 28844486003 scopus 로고    scopus 로고
    • The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR
    • Wennerhold J, Krug A, Bott M. 2005. The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR. J Biol Chem 280:40500-40508. http://dx.doi.org/10.1074/jbc.M508693200.
    • (2005) J Biol Chem , vol.280 , pp. 40500-40508
    • Wennerhold, J.1    Krug, A.2    Bott, M.3
  • 57
    • 34347397789 scopus 로고    scopus 로고
    • Characterization of citrate utilization in Corynebacterium glutamicum by transcriptome and proteome analysis
    • Polen T, Schluesener D, Poetsch A, Bott M, Wendisch VF. 2007. Characterization of citrate utilization in Corynebacterium glutamicum by transcriptome and proteome analysis. FEMS Microbiol Lett 273:109-119. http://dx.doi.org/10.1111/j.1574-6968.2007.00793.x.
    • (2007) FEMS Microbiol Lett , vol.273 , pp. 109-119
    • Polen, T.1    Schluesener, D.2    Poetsch, A.3    Bott, M.4    Wendisch, V.F.5
  • 58
    • 0041429503 scopus 로고    scopus 로고
    • Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays
    • Wendisch VF. 2003. Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays. J Biotechnol 104:273-285. http://dx.doi.org/10.1016/S0168-1656(03)00147-0.
    • (2003) J Biotechnol , vol.104 , pp. 273-285
    • Wendisch, V.F.1
  • 59
    • 0345359589 scopus 로고    scopus 로고
    • Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source
    • Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegrabe I, Tauch A. 2003. Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source. J Biotechnol 106:269-286. http://dx.doi.org/10.1016/j.jbiotec.2003.08.006.
    • (2003) J Biotechnol , vol.106 , pp. 269-286
    • Hüser, A.T.1    Becker, A.2    Brune, I.3    Dondrup, M.4    Kalinowski, J.5    Plassmeier, J.6    Pühler, A.7    Wiegrabe, I.8    Tauch, A.9
  • 60
    • 6344272244 scopus 로고    scopus 로고
    • Deletion of the genes encoding the MtrA-MtrB two-component system of Corynebacterium glutamicum has a strong influence on cell morphology, antibiotics susceptibility and expression of genes involved in osmoprotection
    • Möker N, Brocker M, Schaffer S, Krämer R, Morbach S, Bott M. 2004. Deletion of the genes encoding the MtrA-MtrB two-component system of Corynebacterium glutamicum has a strong influence on cell morphology, antibiotics susceptibility and expression of genes involved in osmoprotection. Mol Microbiol 54:420-438. http://dx.doi.org/10.1111/j.1365-2958.2004.04249.x.
    • (2004) Mol Microbiol , vol.54 , pp. 420-438
    • Möker, N.1    Brocker, M.2    Schaffer, S.3    Krämer, R.4    Morbach, S.5    Bott, M.6
  • 61
    • 84878002399 scopus 로고    scopus 로고
    • Maltose uptake by the novel ABC transport system MusEFGK21 causes increased expression of ptsG in Corynebacterium glutamicum
    • Henrich A, Kuhlmann N, Eck AW, Krämer R, Seibold GM. 2013. Maltose uptake by the novel ABC transport system MusEFGK21 causes increased expression of ptsG in Corynebacterium glutamicum. J Bacteriol 195:2573-2584. http://dx.doi.org/10.1128/JB.01629-12.
    • (2013) J Bacteriol , vol.195 , pp. 2573-2584
    • Henrich, A.1    Kuhlmann, N.2    Eck, A.W.3    Krämer, R.4    Seibold, G.M.5
  • 63
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 64
    • 58149203228 scopus 로고    scopus 로고
    • SUPERFAMILY-sophisticated comparative genomics, data mining, visualization and phylogeny
    • Wilson D, Pethica R, Zhou Y, Talbot C, Vogel C, Madera M, Chothia C, Gough J. 2009. SUPERFAMILY-sophisticated comparative genomics, data mining, visualization and phylogeny. Nucleic Acids Res 37: D380-D386. http://dx.doi.org/10.1093/nar/gkn762.
    • (2009) Nucleic Acids Res , vol.37 , pp. D380-D386
    • Wilson, D.1    Pethica, R.2    Zhou, Y.3    Talbot, C.4    Vogel, C.5    Madera, M.6    Chothia, C.7    Gough, J.8
  • 66
    • 44949239504 scopus 로고    scopus 로고
    • Discovering sequence motifs with arbitrary insertions and deletions
    • Frith MC, Saunders NF, Kobe B, Bailey TL. 2008. Discovering sequence motifs with arbitrary insertions and deletions. PLoS Comput Biol 4:e1000071. http://dx.doi.org/10.1371/journal.pcbi.1000071.
    • (2008) PLoS Comput Biol , vol.4 , pp. e1000071
    • Frith, M.C.1    Saunders, N.F.2    Kobe, B.3    Bailey, T.L.4
  • 67
    • 79953300078 scopus 로고    scopus 로고
    • FIMO: scanning for occurrences of a given motif
    • Grant CE, Bailey TL, Noble WS. 2011. FIMO: scanning for occurrences of a given motif. Bioinformatics 27:1017-1018. http://dx.doi.org/10.1093/bioinformatics/btr064.
    • (2011) Bioinformatics , vol.27 , pp. 1017-1018
    • Grant, C.E.1    Bailey, T.L.2    Noble, W.S.3
  • 68
    • 14844334161 scopus 로고    scopus 로고
    • Analyses of enzyme II gene mutants for sugar transport and heterologous expression of fructokinase gene in Corynebacterium glutamicum ATCC 13032
    • Moon MW, Kim HJ, Oh TK, Shin CS, Lee JS, Kim SJ, Lee JK. 2005. Analyses of enzyme II gene mutants for sugar transport and heterologous expression of fructokinase gene in Corynebacterium glutamicum ATCC 13032. FEMS Microbiol Lett 244:259-266. http://dx.doi.org/10.1016/j.femsle.2005.01.053.
    • (2005) FEMS Microbiol Lett , vol.244 , pp. 259-266
    • Moon, M.W.1    Kim, H.J.2    Oh, T.K.3    Shin, C.S.4    Lee, J.S.5    Kim, S.J.6    Lee, J.K.7
  • 69
    • 69249166013 scopus 로고    scopus 로고
    • Chapter 1: Variation in form and function the helix-turn-helix regulators of the GntR superfamily
    • Hoskisson PA, Rigali S. 2009. Chapter 1: Variation in form and function the helix-turn-helix regulators of the GntR superfamily. Adv Appl Micro-biol 69:1-22. http://dx.doi.org/10.1016/S0065-2164(09)69001-8.
    • (2009) Adv Appl Micro-biol , vol.69 , pp. 1-22
    • Hoskisson, P.A.1    Rigali, S.2
  • 70
    • 42049092081 scopus 로고    scopus 로고
    • The mechanisms of carbon catabolite repression in bacteria
    • Deutscher J. 2008. The mechanisms of carbon catabolite repression in bacteria. Curr Opin Microbiol 11:87-93. http://dx.doi.org/10.1016/j.mib.2008.02.007.
    • (2008) Curr Opin Microbiol , vol.11 , pp. 87-93
    • Deutscher, J.1
  • 71
    • 47549110972 scopus 로고    scopus 로고
    • Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
    • Görke B, Stülke J. 2008. Carbon catabolite repression in bacteria: many ways to make the most out of nutrients. Nat Rev Microbiol 6:613-624. http://dx.doi.org/10.1038/nrmicro1932.
    • (2008) Nat Rev Microbiol , vol.6 , pp. 613-624
    • Görke, B.1    Stülke, J.2
  • 72
    • 84876088524 scopus 로고    scopus 로고
    • Sialic acid catabolism in Staphylococcus aureus
    • Olson ME, King JM, Yahr TL, Horswill AR. 2013. Sialic acid catabolism in Staphylococcus aureus. J Bacteriol 195:1779-1788. http://dx.doi.org/10.1128/JB.02294-12.
    • (2013) J Bacteriol , vol.195 , pp. 1779-1788
    • Olson, M.E.1    King, J.M.2    Yahr, T.L.3    Horswill, A.R.4
  • 74
    • 0032929297 scopus 로고    scopus 로고
    • Convergent pathways for utilization of the amino sugars N-acetylglucosamine, N-acetylmannosamine, and Nacetylneuraminic acid by Escherichia coli
    • Plumbridge J, Vimr E. 1999. Convergent pathways for utilization of the amino sugars N-acetylglucosamine, N-acetylmannosamine, and Nacetylneuraminic acid by Escherichia coli. J Bacteriol 181:47-54.
    • (1999) J Bacteriol , vol.181 , pp. 47-54
    • Plumbridge, J.1    Vimr, E.2
  • 75
    • 37349036156 scopus 로고    scopus 로고
    • Different regions of Mlc and NagC, homologous transcriptional repressors controlling expression of the glucose and N-acetylglucosamine phosphotransferase systems in Escherichia coli, are required for inducer signal recognition
    • Pennetier C, Dominguez-Ramirez L, Plumbridge J. 2008. Different regions of Mlc and NagC, homologous transcriptional repressors controlling expression of the glucose and N-acetylglucosamine phosphotransferase systems in Escherichia coli, are required for inducer signal recognition. Mol Microbiol 67:364-377.
    • (2008) Mol Microbiol , vol.67 , pp. 364-377
    • Pennetier, C.1    Dominguez-Ramirez, L.2    Plumbridge, J.3
  • 76
    • 37349076556 scopus 로고    scopus 로고
    • A theoretical interpretation of the transient sialic acid toxicity of a nanR mutant of Escherichia coli
    • Chu D, Roobol J, Blomfield IC. 2008. A theoretical interpretation of the transient sialic acid toxicity of a nanR mutant of Escherichia coli. J Mol Biol 375:875-889. http://dx.doi.org/10.1016/j.jmb.2007.10.073.
    • (2008) J Mol Biol , vol.375 , pp. 875-889
    • Chu, D.1    Roobol, J.2    Blomfield, I.C.3
  • 77
    • 80054830887 scopus 로고    scopus 로고
    • CcpA ensures optimal metabolic fitness of Streptococcus pneumoniae
    • Carvalho SM, Kloosterman TG, Kuipers OP, Neves AR. 2011. CcpA ensures optimal metabolic fitness of Streptococcus pneumoniae. PLoS One 6:e26707. http://dx.doi.org/10.1371/journal.pone.0026707.
    • (2011) PLoS One , vol.6 , pp. e26707
    • Carvalho, S.M.1    Kloosterman, T.G.2    Kuipers, O.P.3    Neves, A.R.4
  • 78
    • 84935747332 scopus 로고    scopus 로고
    • Carbon catabolite repression by seryl phosphorylated HPr is essential to Streptococcus pneumoniae in carbohydrate-rich environments
    • Fleming E, Lazinski DW, Camilli A. 2015. Carbon catabolite repression by seryl phosphorylated HPr is essential to Streptococcus pneumoniae in carbohydrate-rich environments. Mol Microbiol 97:360-380. http://dx.doi.org/10.1111/mmi.13033.
    • (2015) Mol Microbiol , vol.97 , pp. 360-380
    • Fleming, E.1    Lazinski, D.W.2    Camilli, A.3
  • 80
    • 84943606020 scopus 로고    scopus 로고
    • Transcription of malP is subject to PTS-dependent regulation in Corynebacterium glutamicum
    • Kuhlmann N, Petrov DP, Henrich AW, Lindner SN, Wendisch VF, Seibold GM. 2015. Transcription of malP is subject to PTS-dependent regulation in Corynebacterium glutamicum. Microbiology 161:1830-1843. http://dx.doi.org/10.1099/mic.0.000134.
    • (2015) Microbiology , vol.161 , pp. 1830-1843
    • Kuhlmann, N.1    Petrov, D.P.2    Henrich, A.W.3    Lindner, S.N.4    Wendisch, V.F.5    Seibold, G.M.6
  • 81
    • 79961140871 scopus 로고    scopus 로고
    • Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum
    • Toyoda K, Teramoto H, Inui M, Yukawa H. 2011. Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum. J Bacteriol 193:4123-4133. http://dx.doi.org/10.1128/JB.00384-11.
    • (2011) J Bacteriol , vol.193 , pp. 4123-4133
    • Toyoda, K.1    Teramoto, H.2    Inui, M.3    Yukawa, H.4
  • 82
    • 47249147911 scopus 로고    scopus 로고
    • The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator
    • Kohl TA, Baumbach J, Jungwirth B, Pühler A, Tauch A. 2008. The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator. J Biotechnol 135:340-350. http://dx.doi.org/10.1016/j.jbiotec.2008.05.011.
    • (2008) J Biotechnol , vol.135 , pp. 340-350
    • Kohl, T.A.1    Baumbach, J.2    Jungwirth, B.3    Pühler, A.4    Tauch, A.5
  • 83
    • 2442689180 scopus 로고    scopus 로고
    • Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum
    • Kim HJ, Kim TH, Kim Y, Lee HS. 2004. Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum. J Bacteriol 186:3453-3460. http://dx.doi.org/10.1128/JB.186.11.3453-3460.2004.
    • (2004) J Bacteriol , vol.186 , pp. 3453-3460
    • Kim, H.J.1    Kim, T.H.2    Kim, Y.3    Lee, H.S.4
  • 84
    • 84871689556 scopus 로고    scopus 로고
    • High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum
    • Jungwirth B, Sala C, Kohl TA, Uplekar S, Baumbach J, Cole ST, Puhler A, Tauch A. 2013. High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum. Microbiology 159:12-22. http://dx.doi.org/10.1099/mic.0.062059-0.
    • (2013) Microbiology , vol.159 , pp. 12-22
    • Jungwirth, B.1    Sala, C.2    Kohl, T.A.3    Uplekar, S.4    Baumbach, J.5    Cole, S.T.6    Puhler, A.7    Tauch, A.8
  • 85
    • 67449122992 scopus 로고    scopus 로고
    • Insights into the evolution of sialic acid catabolism among bacteria
    • Almagro-Moreno S, Boyd EF. 2009. Insights into the evolution of sialic acid catabolism among bacteria. BMC Evol Biol 9:118. http://dx.doi.org/10.1186/1471-2148-9-118.
    • (2009) BMC Evol Biol , vol.9 , pp. 118
    • Almagro-Moreno, S.1    Boyd, E.F.2
  • 89
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan D. 1983. Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166:557-580. http://dx.doi.org/10.1016/S0022-2836(83)80284-8.
    • (1983) J Mol Biol , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 90
    • 0023042283 scopus 로고
    • Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
    • Studier FW, Moffatt BA. 1986. Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189: 113-130. http://dx.doi.org/10.1016/0022-2836(86)90385-2.
    • (1986) J Mol Biol , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 91
    • 0025912270 scopus 로고
    • A family of Coryne-bacterium glutamicum/Escherichia coli shuttle vectors for cloning, controlled gene expression, and promoter probing
    • Eikmanns BJ, Kleinertz E, Liebl W, Sahm H. 1991. A family of Coryne-bacterium glutamicum/Escherichia coli shuttle vectors for cloning, controlled gene expression, and promoter probing. Gene 102:93-98. http://dx.doi.org/10.1016/0378-1119(91)90545-M.
    • (1991) Gene , vol.102 , pp. 93-98
    • Eikmanns, B.J.1    Kleinertz, E.2    Liebl, W.3    Sahm, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.