KIAA0368-deficiency affects disassembly of 26S proteasome under oxidative stress condition

Journal of Biochemistry

Volumn 159, Issue 6, 2016, Pages 609-618

  Haratake, Kousuke ^a   Sato, Akitsugu ^a   Tsuruta, Fuminori ^a   Chiba, Tomoki ^a  

^a UNIVERSITY OF TSUKUBA   (Japan)

Author keywords

Oxidative stress; Proteasome; Proteasome activators; Protein degradation; Ubiquitin

Indexed keywords

PROTEASOME; ATP DEPENDENT 26S PROTEASE;

ANIMAL EXPERIMENT; ARTICLE; CELL VIABILITY ASSAY; CHROMOSOME PAIRING; CONTROLLED STUDY; CORRELATION ANALYSIS; DNA FRAGMENTATION ASSAY; FEMALE; GENE; GENE CASSETTE; KIAA0368 GENE; MALE; MOUSE; NONHUMAN; OXIDATIVE STRESS; PROTEIN DEGRADATION; ANIMAL; GENETICS; KNOCKOUT MOUSE; METABOLISM; PHYSIOLOGY;

ANIMALS; MICE; MICE, KNOCKOUT; OXIDATIVE STRESS; PROTEASOME ENDOPEPTIDASE COMPLEX; PROTEOLYSIS;

EID: 84979047223     PISSN: 0021924X     EISSN: 17562651     Source Type: Journal    
DOI: 10.1093/jb/mvw006     Document Type: Article

References (45)

1. Sedelnikova, O.A., Redon, C.E., Dickey, J.S., Nakamura, A.J., Georgakilas, A.G., and Bonner, W.M. (2010) Role of oxidatively induced DNA lesions in human pathogenesis. Mutant Res. 704, 152-159.
2. Adibhatla, R.M. and Hatcher, J.F. (2010) Lipid oxidation and peroxidation in CNS health and disease: from molecular mechanisms to therapeutic opportunities. Antioxid. Redox. Signal. 12, 125-169.
3. Bochkov, V.N., Oskolkova, O.V., Birukov, K.G., Levonen, A.L., Binder, C.J., and Stockl, J. (2010) Generation and biological activities of oxidized phospholipids. Antioxid. Redox. Signal. 12, 1009-1059.
4. Reznick, A.Z. and Packer, L. (1998) Oxidative damage to proteins: spectrophotometric method for carbonyl assay. Methods Enzymol. 233, 357-363.
5. Smith, C.D., Carney, J.M., Starke Reed, P.E., Oliver, C.N., Stadtman, E.R., Floyd, R.A., and Markesbery, W.R. (1991) Excess brain protein oxidation and enzyme dysfunction in normal aging and in Alzheimer disease. Proc. Natl. Acad. Sci. USA 88, 10540-10543.
6. Lih Brody, L., Powell, S.R., Collier, K.P., Reddy, G.M., Cerchia, R., Kahn, E., Weissman, G.S., Katz, S., Floyd, R.A., McKinley, M.J., Fisher, S.E., and Mullin, G.E. (1996) Increased oxidative stress and decreased antioxidant defenses in mucosa of inflammatory bowel disease. Dig. Dis. Sci. 41, 2078-2086.
7. Aiken, C.T., Kaake, R.M., Wang, X., and Huang, L. (2011) Oxidative stress-mediated regulation of proteasome complexes. Mol. Cell. Proteomics 10, R110.006924.
8. Page, M.M., Robb, E.L., Salway, K.D., and Stuart, J.A. (2010) Mitochondrial redox metabolism: Aging, longevity and dietary effects. Mech. Ageing Dev. 131, 242-252.
9. Goldberg, A.L. (1990) ATP-dependent proteases in prokaryotic and eukaryotic cells. Semin. Cell Biol. 1, 423-432.
10. Groll, M., Ditzel, L., Lo we, J., Stock, D., Bochtler, M., Bartunik, H.D., and Huber, R. (1997) Structure of 20S proteasome from yeast at 2.4 A resolution. Nature 386, 463-471.
11. Heinemeyer, W., Ramos, P.C., and Dohmen, R.J. (2004) The ultimate nanoscale mincer: Assembly, structure and active sites of the 20S proteasome core. Cell. Mol. Life Sci. 61, 1562-1578.
12. Whitby, F.G., Masters, E.I., Kramer, L., Knowlton, J.R., Yao, Y., Wang, C.C., and Hill, C.P. (2000) Structural basis for the activation of 20S proteasomes by 11S regulators. Nature 408, 115-120.
13. Groll, M., Bajorek, M., Kohler, A., Moroder, L., Rubin, D.M., Huber, R., Glickman, M.H., and Finley, D. (2000) A gated channel into the proteasome core particle. Nat. Struct. Biol. 7, 1062-1067.
14. Kohhler, A., Cascio, P., Leggett, D.S., Woo, K.M., Goldberg, A.L., and Finley, D. (2001) The axial channel of the proteasome core particle is gated by the Rpt2 ATPase and controls both substrate entry and product release. Mol. Cell 7, 1143-1152.
15. Stadtmueller, B.M. and Hill, C.P. (2011) Proteasome activators. Mol. Cell 41, 8-19.
16. Hershko, A. and Ciechanover, A. (1998) The ubiquitin system. Annu. Rev. Biochem. 67, 425-479.
17. Deveraux, Q., Ustrell, V., Pickart, C., and Rechsteiner, M. (1994) A 26 S protease subunit that binds ubiquitin conjugates. J. Biol. Chem. 269, 7059-7061.
18. Lam, Y.A., Lawson, T.G., Velayutham, M., Zweler, J.L., and Pickart, C.M. (2002) A proteasomal ATPase subunit recognizes the polyubiquitin degradation signal. Nature 416, 763-767.
19. Finley, D. (2002) Ubiquitin chained and crosslinked. Nat. Cell. Biol. 4, E121-E123.
20. Groettrup, M., Soza, A., Eggers, M., Kuehn, L., Dick, T.P., Schild, H., Rammensee, H.G., Koszinowski, U.H., and Kloetzel, P.M. (1996) A role for the proteasome regulator PA28alpha in antigen presentation. Nature 381, 166-168.
21. Dick, T.P., Ruppert, T., Groettrup, M., Kloetzel, P.M., Kuehn, L., Koszinowski, U.H., Stevanović, S., Schild, H., and Rammensee, H.G. (1996) Coordinated dual cleavages induced by the proteasome regulator PA28 lead to dominant MHC ligands. Cell 86, 253-262.
22. Murata, S., Kawahara, H., Tohma, S., Yamamoto, K., Kasahara, M., Nabeshima, Y., Tanaka, K., and Chiba, T. (1999) Growth retardation in mice lacking the proteasome activator PA28gamma. J. Biol. Chem. 274, 38211-38215.
23. Qian, M.X., Pang, Y., Liu, C.H., Haratake, K., Du, B.Y., Ji, D.Y., Wang, G.F., Zhu, Q.Q., Song, W., Yu, Y., Zhang, X.X., Huang, H.T., Miao, S., Chen, L.B., Zhang, Z.H., Liang, Y.N., Liu, S., Cha, H., Yang, D., Zhai, Y., Komatsu, T., Tsuruta, F., Li, H., Cao, C., Li, W., Li, G.H., Cheng, Y., Chiba, T., Wang, L., Goldberg, A.L., Shen, Y., and Qiu, X.B. (2013) Acetylationmediated proteasomal degradation of core histones during DNA repair and spermatogenesis. Cell 153, 1012-1024.
24. Leggett, D.S., Hanna, J., Borodovsky, A., Crosas, B., Schmidt, M., Baker, R.T., Walz, T., Ploegh, H., and Finley, D. (2002) Multiple associated proteins regulate proteasome structure and function. Mol. Cell 10, 495-507.
25. Kleijnen, M.F., Roelofs, J., Park, S., Hathaway, N.A., Glickman, M., King, R.W., and Finley, D. (2007) Stability of the proteasome can be regulated allosterically through engagement of its proteolytic active sites. Nat. Struct. Mol. Biol. 14, 1180-1188.
26. Wang, X., Yen, J., Kaiser, P., and Huang, L. (2010) Regulation of the 26S proteasome complex during oxidative stress. Sci. Signal. 3, ra88.
27. Park, S., Kim, W., Tian, G., Gygi, S.P., and Finley, D. (2011) Structural defects in the regulatory particle-core particle interface of the proteasome induce a novel proteasome stress response. J. Biol. Chem. 286, 36652-36666.
28. De La Mota Peynado, A., Lee, S.Y., Pierce, B.M., Wani, P., Singh, C.R., and Roelofs, J. (2013) The proteasomeassociated protein Ecm29 inhibits proteasomal ATPase activity and in vivo protein degradation by the proteasome. J. Biol. Chem. 288, 29467-29481.
29. Lehmann, A., Niewienda, A., Jechow, K., Janek, K., and Enenkel, C. (2010) Ecm29 fulfils quality control functions in proteasome assembly. Mol. Cell 38, 879-888.
30. Gorbea, C., Goellner, G.M., Teter, K., Holmes, R.K., and Rechsteiner, M. (2004) Characterization of mammalian Ecm29, a 26 S proteasome- Associated protein that localizes to the nucleus and membrane vesicles. J. Biol. Chem. 279, 54849-54861.
31. Gorbea, C., Pratt, G., Ustrell, V., Bell, R., Sahasrabudhe, S., Hughes, R.E., and Rechsteiner, M. (2010) A protein interaction network for Ecm29 links the 26 S proteasome to molecular motors and endosomal components. J. Biol. Chem. 285, 31616-31633.
32. Gorbea, C., Rechsteiner, M., Vallejo, J.G., and Bowles, N.E. (2013) Depletion of the 26S proteasome adaptor Ecm29 increases Toll-like receptor 3 signaling. Sci. Signal. 6, ra86.
33. Kigoshi, Y., Tsuruta, F., and Chiba, T. (2011) Ubiquitin ligase activity of Cul3-KLHL7 protein is attenuated by autosomal dominant retinitis pigmentosa causative mutation. J. Biol. Chem. 286, 33613-33621.
34. Tanahashi, N., Yokota, K., Ahn, J.Y., Chung, C.H., Fujiwara, T., Takahashi, E., DeMartino, G.N., Slaughter, C.A., Toyonaga, T., Yamamura, K., Shimbara, N., and Tanaka, K. (1997) Molecular properties of the proteasome activator PA28 family proteins and gamma-interferon regulation. Genes Cells 2, 195-211.
35. Tanahashi, N., Suzuki, M., Fujiwara, T., Takahashi, E., Shimbara, N., Chung, C.H., and Tanaka, K. (1998) Chromosomal localization and immunological analysis of a family of human 26S proteasomal ATPases. Biochem. Biophys. Res. Commun. 243, 229-232.
36. Dalle Donne, I., Rossi, R., Giustarini, D., Milzani, A., and Colombo, R. (2003) Protein carbonyl groups as biomarkers of oxidative stress. Clin. Chim. Acta. 40, 23-38.
37. Tai, H.C., Besche, H., Goldberg, A.L., Schuman, E.M. (2010) Characterization of the brain 26S proteasome and its interacting proteins. Front. Mol. Neurosci. 3, 12 38.
38. Stadtman, E.R. (2006) Protein oxidation and aging. Free Radic. Res. 40, 1250-1258.
39. Davies, K.J. (2001) Degradation of oxidized proteins by the 20S proteasome. Biochimie 83, 301-310.
40. Seifert, U., Bialy, L.P., Ebstein, F., Bech Otschir, D., Voigt, A., Schroẗer, F., Prozorovski, T., Lange, N., Steffen, J., Rieger, M., Kuckelkorn, U., Aktas, O., Kloetzel, P.M., and Kruger, E. (2010) Immunoproteasomes preserve protein homeostasis upon interferon-induced oxidative stress. Cell 142, 613-624.
41. Shang, F., Gong, X., and Taylor, A. (1997) Activity of ubiquitin-dependent pathway in response to oxidative stress: ubiquitin- Activating enzyme is transiently upregulated. J. Biol. Chem. 272, 23086-23093.
42. Pickering, A.M. and Davies, K.J. (2012) Differential roles of proteasome and immunoproteasome regulators Pa28ab, Pa28g and Pa200 in the degradation of oxidized proteins. Arch. Biochem. Biophys. 523, 181-190.
43. Kajava, A.V., Gorbea, C., Ortega, J., Rechsteiner, M., and Steven, A.C. (2004) New HEAT-like repeat motifs in proteins regulating proteasome structure and function. J. Struct. Biol. 146, 425-430.
44. Fehlker, M., Wendler, P., Lehmann, A., and Enenkel, C. (2003) Blm3 is part of nascent proteasomes and is involved in a late stage of nuclear proteasome assembly. EMBO Rep. 4, 959-963.
45. Schmidt, M., Haas, W., Crosas, B., Santamaria, P.G., Gygi, S.P., Walz, T., and Finley, D. (2005) The HEAT repeat protein Blm10 regulates the yeast proteasome by capping the core particle. Nat. Struct. Mol. Biol. 12, 294-303.