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Volumn 5, Issue JUNE2016, 2016, Pages

Functional CRISPR screening identifies the ufmylation pathway as a regulator of SQSTM1/p62

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTOR PROTEIN; PROTEIN P62; PROTEIN SQSTM1; UNCLASSIFIED DRUG; MTOR PROTEIN, HUMAN; PROTEIN; SEQUESTOSOME 1; SQSTM1 PROTEIN, HUMAN; TARGET OF RAPAMYCIN KINASE; UFM1 PROTEIN, HUMAN;

EID: 84978790889     PISSN: None     EISSN: 2050084X     Source Type: Journal    
DOI: 10.7554/eLife.17290     Document Type: Article
Times cited : (109)

References (45)
  • 2
  • 5
    • 84908354098 scopus 로고    scopus 로고
    • The ufm1 cascade
    • Daniel J, Liebau E. 2014. The ufm1 cascade. Cells 3:627-638. doi: 10.3390/cells3020627
    • (2014) Cells , vol.3 , pp. 627-638
    • Daniel, J.1    Liebau, E.2
  • 13
    • 72549095406 scopus 로고    scopus 로고
    • Regulation mechanisms and signaling pathways of autophagy
    • He C, Klionsky DJ. 2009. Regulation mechanisms and signaling pathways of autophagy. Annual Review of Genetics 43:67-93. doi: 10.1146/annurev-genet-102808-114910
    • (2009) Annual Review of Genetics , vol.43 , pp. 67-93
    • He, C.1    Klionsky, D.J.2
  • 15
    • 33646204392 scopus 로고    scopus 로고
    • Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size
    • Hosokawa N, Hara Y, Mizushima N. 2006. Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size. FEBS Letters 580:2623-2629. doi: 10.1016/j.febslet.2006.04.008
    • (2006) FEBS Letters , vol.580 , pp. 2623-2629
    • Hosokawa, N.1    Hara, Y.2    Mizushima, N.3
  • 17
    • 77954599053 scopus 로고    scopus 로고
    • P62/ SQSTM1 is a target gene for transcription factor NRF2 and creates a positive feedback loop by inducing antioxidant response element-driven gene transcription
    • Jain A, Lamark T, Sjøttem E, Larsen KB, Awuh JA, Øvervatn A, McMahon M, Hayes JD, Johansen T. 2010. p62/ SQSTM1 is a target gene for transcription factor NRF2 and creates a positive feedback loop by inducing antioxidant response element-driven gene transcription. Journal of Biological Chemistry 285:22576-22591. doi:10.1074/jbc.M110.118976
    • (2010) Journal of Biological Chemistry , vol.285 , pp. 22576-22591
    • Jain, A.1    Lamark, T.2    Sjøttem, E.3    Larsen, K.B.4    Awuh, J.A.5    Øvervatn, A.6    McMahon, M.7    Hayes, J.D.8    Johansen, T.9
  • 19
    • 84954129051 scopus 로고    scopus 로고
    • P62/SQSTM1 functions as a signaling hub and an autophagy adaptor
    • Katsuragi Y, Ichimura Y, Komatsu M. 2015. p62/SQSTM1 functions as a signaling hub and an autophagy adaptor. FEBS Journal 282:4672-4678. doi: 10.1111/febs.13540
    • (2015) FEBS Journal , vol.282 , pp. 4672-4678
    • Katsuragi, Y.1    Ichimura, Y.2    Komatsu, M.3
  • 22
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 10:R25. doi: 10.1186/gb-2009-10-3-r25
    • (2009) Genome Biology , vol.10 , pp. R25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 23
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nature Methods 9:357-359. doi:10.1038/nmeth.1923
    • (2012) Nature Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 24
    • 0036094026 scopus 로고    scopus 로고
    • Recurrent mutation of the gene encoding sequestosome 1 (SQSTM1/p62) in Paget disease of bone
    • Laurin N, Brown JP, Morissette J, Raymond V. 2002. Recurrent mutation of the gene encoding sequestosome 1 (SQSTM1/p62) in Paget disease of bone. American Journal of Human Genetics 70:1582-1588. doi: 10.1086/340731
    • (2002) American Journal of Human Genetics , vol.70 , pp. 1582-1588
    • Laurin, N.1    Brown, J.P.2    Morissette, J.3    Raymond, V.4
  • 25
    • 84861743338 scopus 로고    scopus 로고
    • Transient aggregation of ubiquitinated proteins is a cytosolic unfolded protein response to inflammation and endoplasmic reticulum stress
    • Liu XD, Ko S, Xu Y, Fattah EA, Xiang Q, Jagannath C, Ishii T, Komatsu M, Eissa NT. 2012. Transient aggregation of ubiquitinated proteins is a cytosolic unfolded protein response to inflammation and endoplasmic reticulum stress. Journal of Biological Chemistry 287:19687-19698. doi: 10.1074/jbc.M112.350934
    • (2012) Journal of Biological Chemistry , vol.287 , pp. 19687-19698
    • Liu, X.D.1    Ko, S.2    Xu, Y.3    Fattah, E.A.4    Xiang, Q.5    Jagannath, C.6    Ishii, T.7    Komatsu, M.8    Eissa, N.T.9
  • 26
    • 84924629414 scopus 로고    scopus 로고
    • Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
    • Love MI, Huber W, Anders S. 2014. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biology 15:550. doi: 10.1186/s13059-014-0550-8
    • (2014) Genome Biology , vol.15
    • Love, M.I.1    Huber, W.2    Ers, S.3
  • 27
    • 75749122303 scopus 로고    scopus 로고
    • Methods in mammalian autophagy research
    • Mizushima N, Yoshimori T, Levine B. 2010. Methods in mammalian autophagy research. Cell 140:313-326. doi:10.1016/j.cell.2010.01.028
    • (2010) Cell , vol.140 , pp. 313-326
    • Mizushima, N.1    Yoshimori, T.2    Levine, B.3
  • 28
    • 81055144784 scopus 로고    scopus 로고
    • Autophagy: Renovation of cells and tissues
    • Mizushima N, Komatsu M. 2011. Autophagy: renovation of cells and tissues. Cell 147:728-741. doi: 10.1016/j.cell.2011.10.026
    • (2011) Cell , vol.147 , pp. 728-741
    • Mizushima, N.1    Komatsu, M.2
  • 29
    • 84974588043 scopus 로고    scopus 로고
    • Systematic comparison of CRISPR/Cas9 and RNAi screens for essential genes
    • Morgens DW, Deans RM, Li A, Bassik MC. 2016. Systematic comparison of CRISPR/Cas9 and RNAi screens for essential genes. Nature Biotechnology 34:634-636. doi: 10.1038/nbt.3567
    • (2016) Nature Biotechnology , vol.34 , pp. 634-636
    • Morgens, D.W.1    Deans, R.M.2    Li, A.3    Bassik, M.C.4
  • 31
    • 84555187740 scopus 로고    scopus 로고
    • Quantitative visualization of autophagy induction by mTOR inhibitors
    • Nyfeler B, Bergman P, Wilson CJ, Murphy LO. 2012. Quantitative visualization of autophagy induction by mTOR inhibitors. Methods in Molecular Biology 821:239-250. doi: 10.1007/978-1-61779-430-8_14
    • (2012) Methods in Molecular Biology , vol.821 , pp. 239-250
    • Nyfeler, B.1    Bergman, P.2    Wilson, C.J.3    Murphy, L.O.4
  • 33
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt KD, Tatusova T, Maglott DR. 2007. NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Research 35:D61-65. doi: 10.1093/nar/gkl842
    • (2007) Nucleic Acids Research , vol.35 , pp. D61-D65
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 37
    • 84895871173 scopus 로고    scopus 로고
    • DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
    • Sternberg SH, Redding S, Jinek M, Greene EC, Doudna JA. 2014. DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature 507:62-67. doi: 10.1038/nature13011
    • (2014) Nature , vol.507 , pp. 62-67
    • Sternberg, S.H.1    Redding, S.2    Jinek, M.3    Greene, E.C.4    Doudna, J.A.5
  • 38
    • 84901815187 scopus 로고    scopus 로고
    • Cargo recognition and trafficking in selective autophagy
    • Stolz A, Ernst A, Dikic I. 2014. Cargo recognition and trafficking in selective autophagy. Nature Cell Biology 16: 495-501. doi: 10.1038/ncb2979
    • (2014) Nature Cell Biology , vol.16 , pp. 495-501
    • Stolz, A.1    Ernst, A.2    Dikic, I.3
  • 40
    • 0001790593 scopus 로고
    • Depth-First Search and Linear Graph Algorithms
    • Tarjan R. 1972. Depth-First Search and Linear Graph Algorithms. SIAM Journal on Computing 1:146-160. doi:10.1137/0201010
    • (1972) SIAM Journal on Computing , vol.1 , pp. 146-160
    • Tarjan, R.1
  • 42
    • 84892749369 scopus 로고    scopus 로고
    • Genetic screens in human cells using the CRISPR-Cas9 system
    • Wang T, Wei JJ, Sabatini DM, Lander ES. 2014. Genetic screens in human cells using the CRISPR-Cas9 system. Science 343:80-84. doi: 10.1126/science.1246981
    • (2014) Science , vol.343 , pp. 80-84
    • Wang, T.1    Wei, J.J.2    Sabatini, D.M.3    Lander, E.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.