-
1
-
-
84928091332
-
Permutation testing in the presence of polygenic variation
-
Abney, M., Permutation testing in the presence of polygenic variation. Genet. Epidemiol. 39 (2015), 249–258.
-
(2015)
Genet. Epidemiol.
, vol.39
, pp. 249-258
-
-
Abney, M.1
-
2
-
-
84923068258
-
Magical mystery tour: MLO proteins in plant immunity and beyond
-
Acevedo-Garcia, J., Kusch, S., Panstruga, R., Magical mystery tour: MLO proteins in plant immunity and beyond. New Phytol. 204 (2014), 273–281.
-
(2014)
New Phytol.
, vol.204
, pp. 273-281
-
-
Acevedo-Garcia, J.1
Kusch, S.2
Panstruga, R.3
-
3
-
-
0035151437
-
Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana
-
Aguadé, M., Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana. Mol. Biol. Evol. 18 (2001), 1–9.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1-9
-
-
Aguadé, M.1
-
4
-
-
69749099417
-
Fast model-based estimation of ancestry in unrelated individuals
-
Alexander, D.H., Novembre, J., Lange, K., Fast model-based estimation of ancestry in unrelated individuals. Genome Res. 19 (2009), 1655–1664.
-
(2009)
Genome Res.
, vol.19
, pp. 1655-1664
-
-
Alexander, D.H.1
Novembre, J.2
Lange, K.3
-
5
-
-
0033603516
-
EIN2, a bifunctional transducer of ethylene and stress responses in Arabidopsis
-
Alonso, J.M., Hirayama, T., Roman, G., Nourizadeh, S., Ecker, J.R., EIN2, a bifunctional transducer of ethylene and stress responses in Arabidopsis. Science 284 (1999), 2148–2152.
-
(1999)
Science
, vol.284
, pp. 2148-2152
-
-
Alonso, J.M.1
Hirayama, T.2
Roman, G.3
Nourizadeh, S.4
Ecker, J.R.5
-
6
-
-
33646443682
-
Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes
-
Aranzana, M.J., Kim, S., Zhao, K., Bakker, E., Horton, M., Jakob, K., Lister, C., Molitor, J., Shindo, C., Tang, C., et al. Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes. PLoS Genet., 1, 2005, e60.
-
(2005)
PLoS Genet.
, vol.1
, pp. e60
-
-
Aranzana, M.J.1
Kim, S.2
Zhao, K.3
Bakker, E.4
Horton, M.5
Jakob, K.6
Lister, C.7
Molitor, J.8
Shindo, C.9
Tang, C.10
-
7
-
-
77953233453
-
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
-
Atwell, S., Huang, Y.S., Vilhjálmsson, B.J., Willems, G., Horton, M., Li, Y., Meng, D., Platt, A., Tarone, A.M., Hu, T.T., et al. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature 465 (2010), 627–631.
-
(2010)
Nature
, vol.465
, pp. 627-631
-
-
Atwell, S.1
Huang, Y.S.2
Vilhjálmsson, B.J.3
Willems, G.4
Horton, M.5
Li, Y.6
Meng, D.7
Platt, A.8
Tarone, A.M.9
Hu, T.T.10
-
8
-
-
75949107013
-
SEUSS and SEUSS-LIKE transcriptional adaptors regulate floral and embryonic development in Arabidopsis
-
Bao, F., Azhakanandam, S., Franks, R.G., SEUSS and SEUSS-LIKE transcriptional adaptors regulate floral and embryonic development in Arabidopsis. Plant Physiol. 152 (2010), 821–836.
-
(2010)
Plant Physiol.
, vol.152
, pp. 821-836
-
-
Bao, F.1
Azhakanandam, S.2
Franks, R.G.3
-
9
-
-
38349166654
-
Native range genetic variation in Arabidopsis thaliana is strongly geographically structured and reflects Pleistocene glacial dynamics
-
Beck, J.B., Schmuths, H., Schaal, B.A., Native range genetic variation in Arabidopsis thaliana is strongly geographically structured and reflects Pleistocene glacial dynamics. Mol. Ecol. 17 (2008), 902–915.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 902-915
-
-
Beck, J.B.1
Schmuths, H.2
Schaal, B.A.3
-
10
-
-
2942645004
-
Ethylene response factor 1 mediates Arabidopsis resistance to the soilborne fungus Fusarium oxysporum
-
Berrocal-Lobo, M., Molina, A., Ethylene response factor 1 mediates Arabidopsis resistance to the soilborne fungus Fusarium oxysporum. Mol. Plant Microbe Interact. 17 (2004), 763–770.
-
(2004)
Mol. Plant Microbe Interact.
, vol.17
, pp. 763-770
-
-
Berrocal-Lobo, M.1
Molina, A.2
-
11
-
-
84943175876
-
Human genomics: The end of the start for population sequencing
-
Birney, E., Soranzo, N., Human genomics: The end of the start for population sequencing. Nature 526 (2015), 52–53.
-
(2015)
Nature
, vol.526
, pp. 52-53
-
-
Birney, E.1
Soranzo, N.2
-
12
-
-
84892406659
-
The genetic structure of Arabidopsis thaliana in the south-western Mediterranean range reveals a shared history between North Africa and southern Europe
-
Brennan, A.C., Méndez-Vigo, B., Haddioui, A., Martínez-Zapater, J.M., Picó, F.X., Alonso-Blanco, C., The genetic structure of Arabidopsis thaliana in the south-western Mediterranean range reveals a shared history between North Africa and southern Europe. BMC Plant Biol., 14, 2014, 17.
-
(2014)
BMC Plant Biol.
, vol.14
, pp. 17
-
-
Brennan, A.C.1
Méndez-Vigo, B.2
Haddioui, A.3
Martínez-Zapater, J.M.4
Picó, F.X.5
Alonso-Blanco, C.6
-
13
-
-
62649155943
-
A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals
-
Browning, B.L., Browning, S.R., A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals. Am. J. Hum. Genet. 84 (2009), 210–223.
-
(2009)
Am. J. Hum. Genet.
, vol.84
, pp. 210-223
-
-
Browning, B.L.1
Browning, S.R.2
-
14
-
-
80053384429
-
Whole-genome sequencing of multiple Arabidopsis thaliana populations
-
Cao, J., Schneeberger, K., Ossowski, S., Günther, T., Bender, S., Fitz, J., Koenig, D., Lanz, C., Stegle, O., Lippert, C., et al. Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat. Genet. 43 (2011), 956–963.
-
(2011)
Nat. Genet.
, vol.43
, pp. 956-963
-
-
Cao, J.1
Schneeberger, K.2
Ossowski, S.3
Günther, T.4
Bender, S.5
Fitz, J.6
Koenig, D.7
Lanz, C.8
Stegle, O.9
Lippert, C.10
-
15
-
-
84879713263
-
The Arabidopsis ETHYLENE RESPONSE FACTOR1 regulates abiotic stress-responsive gene expression by binding to different cis-acting elements in response to different stress signals
-
Cheng, M.C., Liao, P.M., Kuo, W.W., Lin, T.P., The Arabidopsis ETHYLENE RESPONSE FACTOR1 regulates abiotic stress-responsive gene expression by binding to different cis-acting elements in response to different stress signals. Plant Physiol. 162 (2013), 1566–1582.
-
(2013)
Plant Physiol.
, vol.162
, pp. 1566-1582
-
-
Cheng, M.C.1
Liao, P.M.2
Kuo, W.W.3
Lin, T.P.4
-
16
-
-
84863007735
-
Maize HapMap2 identifies extant variation from a genome in flux
-
Chia, J.M., Song, C., Bradbury, P.J., Costich, D., de Leon, N., Doebley, J., Elshire, R.J., Gaut, B., Geller, L., Glaubitz, J.C., et al. Maize HapMap2 identifies extant variation from a genome in flux. Nat. Genet. 44 (2012), 803–807.
-
(2012)
Nat. Genet.
, vol.44
, pp. 803-807
-
-
Chia, J.M.1
Song, C.2
Bradbury, P.J.3
Costich, D.4
de Leon, N.5
Doebley, J.6
Elshire, R.J.7
Gaut, B.8
Geller, L.9
Glaubitz, J.C.10
-
17
-
-
84862506964
-
1118; iso-2; iso-3
-
1118; iso-2; iso-3. Fly (Austin) 6 (2012), 80–92.
-
(2012)
Fly (Austin)
, vol.6
, pp. 80-92
-
-
Cingolani, P.1
Platts, A.2
Wang, L.3
Coon, M.4
Nguyen, T.5
Wang, L.6
Land, S.J.7
Lu, X.8
Ruden, D.M.9
-
18
-
-
34547108086
-
Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana
-
Clark, R.M., Schweikert, G., Toomajian, C., Ossowski, S., Zeller, G., Shinn, P., Warthmann, N., Hu, T.T., Fu, G., Hinds, D.A., et al. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 317 (2007), 338–342.
-
(2007)
Science
, vol.317
, pp. 338-342
-
-
Clark, R.M.1
Schweikert, G.2
Toomajian, C.3
Ossowski, S.4
Zeller, G.5
Shinn, P.6
Warthmann, N.7
Hu, T.T.8
Fu, G.9
Hinds, D.A.10
-
19
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo, M.A., Banks, E., Poplin, R., Garimella, K.V., Maguire, J.R., Hartl, C., Philippakis, A.A., del Angel, G., Rivas, M.A., Hanna, M., et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet. 43 (2011), 491–498.
-
(2011)
Nat. Genet.
, vol.43
, pp. 491-498
-
-
DePristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
Hartl, C.6
Philippakis, A.A.7
del Angel, G.8
Rivas, M.A.9
Hanna, M.10
-
20
-
-
80053612343
-
A map of local adaptation in Arabidopsis thaliana
-
Fournier-Level, A., Korte, A., Cooper, M.D., Nordborg, M., Schmitt, J., Wilczek, A.M., A map of local adaptation in Arabidopsis thaliana. Science 334 (2011), 86–89.
-
(2011)
Science
, vol.334
, pp. 86-89
-
-
Fournier-Level, A.1
Korte, A.2
Cooper, M.D.3
Nordborg, M.4
Schmitt, J.5
Wilczek, A.M.6
-
21
-
-
44849112517
-
Demographic history of european populations of Arabidopsis thaliana
-
François, O., Blum, M.G., Jakobsson, M., Rosenberg, N.A., Demographic history of european populations of Arabidopsis thaliana. PLoS Genet., 4, 2008, e1000075.
-
(2008)
PLoS Genet.
, vol.4
, pp. e1000075
-
-
François, O.1
Blum, M.G.2
Jakobsson, M.3
Rosenberg, N.A.4
-
22
-
-
80053132716
-
Multiple reference genomes and transcriptomes for Arabidopsis thaliana
-
Gan, X., Stegle, O., Behr, J., Steffen, J.G., Drewe, P., Hildebrand, K.L., Lyngsoe, R., Schultheiss, S.J., Osborne, E.J., Sreedharan, V.T., et al. Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477 (2011), 419–423.
-
(2011)
Nature
, vol.477
, pp. 419-423
-
-
Gan, X.1
Stegle, O.2
Behr, J.3
Steffen, J.G.4
Drewe, P.5
Hildebrand, K.L.6
Lyngsoe, R.7
Schultheiss, S.J.8
Osborne, E.J.9
Sreedharan, V.T.10
-
23
-
-
59949088494
-
Whole population, genome-wide mapping of hidden relatedness
-
Gusev, A., Lowe, J.K., Stoffel, M., Daly, M.J., Altshuler, D., Breslow, J.L., Friedman, J.M., Pe'er, I., Whole population, genome-wide mapping of hidden relatedness. Genome Res. 19 (2009), 318–326.
-
(2009)
Genome Res.
, vol.19
, pp. 318-326
-
-
Gusev, A.1
Lowe, J.K.2
Stoffel, M.3
Daly, M.J.4
Altshuler, D.5
Breslow, J.L.6
Friedman, J.M.7
Pe'er, I.8
-
24
-
-
84922377811
-
Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage
-
Hagmann, J., Becker, C., Müller, J., Stegle, O., Meyer, R.C., Wang, G., Schneeberger, K., Fitz, J., Altmann, T., Bergelson, J., et al. Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage. PLoS Genet., 11, 2015, e1004920.
-
(2015)
PLoS Genet.
, vol.11
, pp. e1004920
-
-
Hagmann, J.1
Becker, C.2
Müller, J.3
Stegle, O.4
Meyer, R.C.5
Wang, G.6
Schneeberger, K.7
Fitz, J.8
Altmann, T.9
Bergelson, J.10
-
25
-
-
80053587873
-
Adaptation to climate across the Arabidopsis thaliana genome
-
Hancock, A.M., Brachi, B., Faure, N., Horton, M.W., Jarymowycz, L.B., Sperone, F.G., Toomajian, C., Roux, F., Bergelson, J., Adaptation to climate across the Arabidopsis thaliana genome. Science 334 (2011), 83–86.
-
(2011)
Science
, vol.334
, pp. 83-86
-
-
Hancock, A.M.1
Brachi, B.2
Faure, N.3
Horton, M.W.4
Jarymowycz, L.B.5
Sperone, F.G.6
Toomajian, C.7
Roux, F.8
Bergelson, J.9
-
26
-
-
0028151259
-
Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for both balancing and directional selection?
-
Hanfstingl, U., Berry, A., Kellogg, E.A., Costa, J.T. 3rd, Rüdiger, W., Ausubel, F.M., Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for both balancing and directional selection?. Genetics 138 (1994), 811–828.
-
(1994)
Genetics
, vol.138
, pp. 811-828
-
-
Hanfstingl, U.1
Berry, A.2
Kellogg, E.A.3
Costa, J.T.4
Rüdiger, W.5
Ausubel, F.M.6
-
27
-
-
84901323480
-
Effect of genetic variation in a Drosophila model of diabetes-associated misfolded human proinsulin
-
He, B.Z., Ludwig, M.Z., Dickerson, D.A., Barse, L., Arun, B., Vilhjálmsson, B.J., Jiang, P., Park, S.Y., Tamarina, N.A., Selleck, S.B., et al. Effect of genetic variation in a Drosophila model of diabetes-associated misfolded human proinsulin. Genetics 196 (2014), 557–567.
-
(2014)
Genetics
, vol.196
, pp. 557-567
-
-
He, B.Z.1
Ludwig, M.Z.2
Dickerson, D.A.3
Barse, L.4
Arun, B.5
Vilhjálmsson, B.J.6
Jiang, P.7
Park, S.Y.8
Tamarina, N.A.9
Selleck, S.B.10
-
28
-
-
84856270364
-
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel
-
Horton, M.W., Hancock, A.M., Huang, Y.S., Toomajian, C., Atwell, S., Auton, A., Muliyati, N.W., Platt, A., Sperone, F.G., Vilhjálmsson, B.J., et al. Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel. Nat. Genet. 44 (2012), 212–216.
-
(2012)
Nat. Genet.
, vol.44
, pp. 212-216
-
-
Horton, M.W.1
Hancock, A.M.2
Huang, Y.S.3
Toomajian, C.4
Atwell, S.5
Auton, A.6
Muliyati, N.W.7
Platt, A.8
Sperone, F.G.9
Vilhjálmsson, B.J.10
-
29
-
-
84867875610
-
A map of rice genome variation reveals the origin of cultivated rice
-
Huang, X., Kurata, N., Wei, X., Wang, Z.X., Wang, A., Zhao, Q., Zhao, Y., Liu, K., Lu, H., Li, W., et al. A map of rice genome variation reveals the origin of cultivated rice. Nature 490 (2012), 497–501.
-
(2012)
Nature
, vol.490
, pp. 497-501
-
-
Huang, X.1
Kurata, N.2
Wei, X.3
Wang, Z.X.4
Wang, A.5
Zhao, Q.6
Zhao, Y.7
Liu, K.8
Lu, H.9
Li, W.10
-
30
-
-
84880319873
-
Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis
-
Huang, X., Ding, J., Effgen, S., Turck, F., Koornneef, M., Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis. New Phytol. 199 (2013), 843–857.
-
(2013)
New Phytol.
, vol.199
, pp. 843-857
-
-
Huang, X.1
Ding, J.2
Effgen, S.3
Turck, F.4
Koornneef, M.5
-
31
-
-
84910671594
-
Keeping it local: evidence for positive selection in Swedish Arabidopsis thaliana
-
Huber, C.D., Nordborg, M., Hermisson, J., Hellmann, I., Keeping it local: evidence for positive selection in Swedish Arabidopsis thaliana. Mol. Biol. Evol. 31 (2014), 3026–3039.
-
(2014)
Mol. Biol. Evol.
, vol.31
, pp. 3026-3039
-
-
Huber, C.D.1
Nordborg, M.2
Hermisson, J.3
Hellmann, I.4
-
32
-
-
84963770510
-
DELAY OF GERMINATION1 (DOG1) regulates both seed dormancy and flowering time through microRNA pathways
-
Huo, H., Wei, S., Bradford, K.J., DELAY OF GERMINATION1 (DOG1) regulates both seed dormancy and flowering time through microRNA pathways. Proc. Natl. Acad. Sci. USA 113 (2016), E2199–E2206.
-
(2016)
Proc. Natl. Acad. Sci. USA
, vol.113
, pp. E2199-E2206
-
-
Huo, H.1
Wei, S.2
Bradford, K.J.3
-
33
-
-
34548016343
-
Recombination and linkage disequilibrium in Arabidopsis thaliana
-
Kim, S., Plagnol, V., Hu, T.T., Toomajian, C., Clark, R.M., Ossowski, S., Ecker, J.R., Weigel, D., Nordborg, M., Recombination and linkage disequilibrium in Arabidopsis thaliana. Nat. Genet. 39 (2007), 1151–1155.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1151-1155
-
-
Kim, S.1
Plagnol, V.2
Hu, T.T.3
Toomajian, C.4
Clark, R.M.5
Ossowski, S.6
Ecker, J.R.7
Weigel, D.8
Nordborg, M.9
-
34
-
-
84905250926
-
Multiple FLC haplotypes defined by independent cis-regulatory variation underpin life history diversity in Arabidopsis thaliana
-
Li, P., Filiault, D., Box, M.S., Kerdaffrec, E., van Oosterhout, C., Wilczek, A.M., Schmitt, J., McMullan, M., Bergelson, J., Nordborg, M., Dean, C., Multiple FLC haplotypes defined by independent cis-regulatory variation underpin life history diversity in Arabidopsis thaliana. Genes Dev. 28 (2014), 1635–1640.
-
(2014)
Genes Dev.
, vol.28
, pp. 1635-1640
-
-
Li, P.1
Filiault, D.2
Box, M.S.3
Kerdaffrec, E.4
van Oosterhout, C.5
Wilczek, A.M.6
Schmitt, J.7
McMullan, M.8
Bergelson, J.9
Nordborg, M.10
Dean, C.11
-
35
-
-
84893083276
-
APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs
-
Licausi, F., Ohme-Takagi, M., Perata, P., APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs. New Phytol. 199 (2013), 639–649.
-
(2013)
New Phytol.
, vol.199
, pp. 639-649
-
-
Licausi, F.1
Ohme-Takagi, M.2
Perata, P.3
-
36
-
-
84908689021
-
Genomic analyses provide insights into the history of tomato breeding
-
Lin, T., Zhu, G., Zhang, J., Xu, X., Yu, Q., Zheng, Z., Zhang, Z., Lun, Y., Li, S., Wang, X., et al. Genomic analyses provide insights into the history of tomato breeding. Nat. Genet. 46 (2014), 1220–1226.
-
(2014)
Nat. Genet.
, vol.46
, pp. 1220-1226
-
-
Lin, T.1
Zhu, G.2
Zhang, J.3
Xu, X.4
Yu, Q.5
Zheng, Z.6
Zhang, Z.7
Lun, Y.8
Li, S.9
Wang, X.10
-
37
-
-
84881026985
-
Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden
-
Long, Q., Rabanal, F.A., Meng, D., Huber, C.D., Farlow, A., Platzer, A., Zhang, Q., Vilhjálmsson, B.J., Korte, A., Nizhynska, V., et al. Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden. Nat. Genet. 45 (2013), 884–890.
-
(2013)
Nat. Genet.
, vol.45
, pp. 884-890
-
-
Long, Q.1
Rabanal, F.A.2
Meng, D.3
Huber, C.D.4
Farlow, A.5
Platzer, A.6
Zhang, Q.7
Vilhjálmsson, B.J.8
Korte, A.9
Nizhynska, V.10
-
38
-
-
84873513977
-
The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background
-
Méndez-Vigo, B., Martínez-Zapater, J.M., Alonso-Blanco, C., The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background. PLoS Genet., 9, 2013, e1003289.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003289
-
-
Méndez-Vigo, B.1
Martínez-Zapater, J.M.2
Alonso-Blanco, C.3
-
39
-
-
0036479020
-
The extent of linkage disequilibrium in Arabidopsis thaliana
-
Nordborg, M., Borevitz, J.O., Bergelson, J., Berry, C.C., Chory, J., Hagenblad, J., Kreitman, M., Maloof, J.N., Noyes, T., Oefner, P.J., et al. The extent of linkage disequilibrium in Arabidopsis thaliana. Nat. Genet. 30 (2002), 190–193.
-
(2002)
Nat. Genet.
, vol.30
, pp. 190-193
-
-
Nordborg, M.1
Borevitz, J.O.2
Bergelson, J.3
Berry, C.C.4
Chory, J.5
Hagenblad, J.6
Kreitman, M.7
Maloof, J.N.8
Noyes, T.9
Oefner, P.J.10
-
40
-
-
22744434580
-
The pattern of polymorphism in Arabidopsis thaliana
-
Nordborg, M., Hu, T.T., Ishino, Y., Jhaveri, J., Toomajian, C., Zheng, H., Bakker, E., Calabrese, P., Gladstone, J., Goyal, R., et al. The pattern of polymorphism in Arabidopsis thaliana. PLoS Biol., 3, 2005, e196.
-
(2005)
PLoS Biol.
, vol.3
, pp. e196
-
-
Nordborg, M.1
Hu, T.T.2
Ishino, Y.3
Jhaveri, J.4
Toomajian, C.5
Zheng, H.6
Bakker, E.7
Calabrese, P.8
Gladstone, J.9
Goyal, R.10
-
41
-
-
57149099394
-
Sequencing of natural strains of Arabidopsis thaliana with short reads
-
Ossowski, S., Schneeberger, K., Clark, R.M., Lanz, C., Warthmann, N., Weigel, D., Sequencing of natural strains of Arabidopsis thaliana with short reads. Genome Res. 18 (2008), 2024–2033.
-
(2008)
Genome Res.
, vol.18
, pp. 2024-2033
-
-
Ossowski, S.1
Schneeberger, K.2
Clark, R.M.3
Lanz, C.4
Warthmann, N.5
Weigel, D.6
-
42
-
-
0037567252
-
Glacial refugia: hotspots but not melting pots of genetic diversity
-
Petit, R., Aguinagalde, I., de Beaulieu, J.L., Bittkau, C., Brewer, S., Cheddadi, R., Ennos, R., Fineschi, S., Grivet, D., Lascoux, M., et al. Glacial refugia: hotspots but not melting pots of genetic diversity. Science 300 (2003), 1563–1565.
-
(2003)
Science
, vol.300
, pp. 1563-1565
-
-
Petit, R.1
Aguinagalde, I.2
de Beaulieu, J.L.3
Bittkau, C.4
Brewer, S.5
Cheddadi, R.6
Ennos, R.7
Fineschi, S.8
Grivet, D.9
Lascoux, M.10
-
43
-
-
58149359446
-
Natural genetic variation of Arabidopsis thaliana is geographically structured in the Iberian peninsula
-
Picó, F.X., Méndez-Vigo, B., Martínez-Zapater, J.M., Alonso-Blanco, C., Natural genetic variation of Arabidopsis thaliana is geographically structured in the Iberian peninsula. Genetics 180 (2008), 1009–1021.
-
(2008)
Genetics
, vol.180
, pp. 1009-1021
-
-
Picó, F.X.1
Méndez-Vigo, B.2
Martínez-Zapater, J.M.3
Alonso-Blanco, C.4
-
44
-
-
77649215261
-
The scale of population structure in Arabidopsis thaliana
-
Platt, A., Horton, M., Huang, Y.S., Li, Y., Anastasio, A.E., Mulyati, N.W., Agren, J., Bossdorf, O., Byers, D., Donohue, K., et al. The scale of population structure in Arabidopsis thaliana. PLoS Genet., 6, 2010, e1000843.
-
(2010)
PLoS Genet.
, vol.6
, pp. e1000843
-
-
Platt, A.1
Horton, M.2
Huang, Y.S.3
Li, Y.4
Anastasio, A.E.5
Mulyati, N.W.6
Agren, J.7
Bossdorf, O.8
Byers, D.9
Donohue, K.10
-
45
-
-
0034595777
-
Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis
-
Samach, A., Onouchi, H., Gold, S.E., Ditta, G.S., Schwarz-Sommer, Z., Yanofsky, M.F., Coupland, G., Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science 288 (2000), 1613–1616.
-
(2000)
Science
, vol.288
, pp. 1613-1616
-
-
Samach, A.1
Onouchi, H.2
Gold, S.E.3
Ditta, G.S.4
Schwarz-Sommer, Z.5
Yanofsky, M.F.6
Coupland, G.7
-
46
-
-
84905572361
-
Inferring human population size and separation history from multiple genome sequences
-
Schiffels, S., Durbin, R., Inferring human population size and separation history from multiple genome sequences. Nat. Genet. 46 (2014), 919–925.
-
(2014)
Nat. Genet.
, vol.46
, pp. 919-925
-
-
Schiffels, S.1
Durbin, R.2
-
47
-
-
0038817772
-
Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana
-
Schmid, K.J., Sorensen, T.R., Stracke, R., Törjék, O., Altmann, T., Mitchell-Olds, T., Weisshaar, B., Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana. Genome Res. 13:6A (2003), 1250–1257.
-
(2003)
Genome Res.
, vol.13
, Issue.6A
, pp. 1250-1257
-
-
Schmid, K.J.1
Sorensen, T.R.2
Stracke, R.3
Törjék, O.4
Altmann, T.5
Mitchell-Olds, T.6
Weisshaar, B.7
-
48
-
-
84874991260
-
Patterns of population epigenomic diversity
-
Schmitz, R.J., Schultz, M.D., Urich, M.A., Nery, J.R., Pelizzola, M., Libiger, O., Alix, A., McCosh, R.B., Chen, H., Schork, N.J., Ecker, J.R., Patterns of population epigenomic diversity. Nature 495 (2013), 193–198.
-
(2013)
Nature
, vol.495
, pp. 193-198
-
-
Schmitz, R.J.1
Schultz, M.D.2
Urich, M.A.3
Nery, J.R.4
Pelizzola, M.5
Libiger, O.6
Alix, A.7
McCosh, R.B.8
Chen, H.9
Schork, N.J.10
Ecker, J.R.11
-
49
-
-
79959974750
-
Reference-guided assembly of four diverse Arabidopsis thaliana genomes
-
Schneeberger, K., Ossowski, S., Ott, F., Klein, J.D., Wang, X., Lanz, C., Smith, L.M., Cao, J., Fitz, J., Warthmann, N., et al. Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proc. Natl. Acad. Sci. USA 108 (2011), 10249–10254.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 10249-10254
-
-
Schneeberger, K.1
Ossowski, S.2
Ott, F.3
Klein, J.D.4
Wang, X.5
Lanz, C.6
Smith, L.M.7
Cao, J.8
Fitz, J.9
Warthmann, N.10
-
50
-
-
70649114601
-
Cis-regulatory changes at FLOWERING LOCUS T mediate natural variation in flowering responses of Arabidopsis thaliana
-
Schwartz, C., Balasubramanian, S., Warthmann, N., Michael, T.P., Lempe, J., Sureshkumar, S., Kobayashi, Y., Maloof, J.N., Borevitz, J.O., Chory, J., Weigel, D., Cis-regulatory changes at FLOWERING LOCUS T mediate natural variation in flowering responses of Arabidopsis thaliana. Genetics 183 (2009), 723–732.
-
(2009)
Genetics
, vol.183
, pp. 723-732
-
-
Schwartz, C.1
Balasubramanian, S.2
Warthmann, N.3
Michael, T.P.4
Lempe, J.5
Sureshkumar, S.6
Kobayashi, Y.7
Maloof, J.N.8
Borevitz, J.O.9
Chory, J.10
Weigel, D.11
-
51
-
-
0034522525
-
Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe
-
Sharbel, T.F., Haubold, B., Mitchell-Olds, T., Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe. Mol. Ecol. 9 (2000), 2109–2118.
-
(2000)
Mol. Ecol.
, vol.9
, pp. 2109-2118
-
-
Sharbel, T.F.1
Haubold, B.2
Mitchell-Olds, T.3
-
52
-
-
3843094797
-
Transcriptional repression of target genes by LEUNIG and SEUSS, two interacting regulatory proteins for Arabidopsis flower development
-
Sridhar, V.V., Surendrarao, A., Gonzalez, D., Conlan, R.S., Liu, Z., Transcriptional repression of target genes by LEUNIG and SEUSS, two interacting regulatory proteins for Arabidopsis flower development. Proc. Natl. Acad. Sci. USA 101 (2004), 11494–11499.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 11494-11499
-
-
Sridhar, V.V.1
Surendrarao, A.2
Gonzalez, D.3
Conlan, R.S.4
Liu, Z.5
-
53
-
-
0347717907
-
Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3
-
Sung, S., Amasino, R.M., Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3. Nature 427 (2004), 159–164.
-
(2004)
Nature
, vol.427
, pp. 159-164
-
-
Sung, S.1
Amasino, R.M.2
-
54
-
-
85027940343
-
Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing
-
100 Tomato Genome Sequencing Consortium, 2014 100 Tomato Genome Sequencing Consortium, Aflitos, S., Schijlen, E., de Jong, H., de Ridder, D., Smit, S., Finkers, R., Wang, J., Zhang, G., Li, N., et al. Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing. Plant J. 80 (2014), 136–148.
-
(2014)
Plant J.
, vol.80
, pp. 136-148
-
-
Aflitos, S.1
Schijlen, E.2
de Jong, H.3
de Ridder, D.4
Smit, S.5
Finkers, R.6
Wang, J.7
Zhang, G.8
Li, N.9
-
55
-
-
84943171338
-
A global reference for human genetic variation
-
1000 Genomes Project Consortium, 2015 1000 Genomes Project Consortium. A global reference for human genetic variation. Nature 526 (2015), 68–74.
-
(2015)
Nature
, vol.526
, pp. 68-74
-
-
-
56
-
-
84949449158
-
The 3,000 rice genomes project
-
3000 Rice Genomes Project, 2014 3000 Rice Genomes Project. The 3,000 rice genomes project. Gigascience, 3, 2014, 7.
-
(2014)
Gigascience
, vol.3
, pp. 7
-
-
-
57
-
-
84862832432
-
UGT87A2, an Arabidopsis glycosyltransferase, regulates flowering time via FLOWERING LOCUS C
-
Wang, B., Jin, S.H., Hu, H.Q., Sun, Y.G., Wang, Y.W., Han, P., Hou, B.K., UGT87A2, an Arabidopsis glycosyltransferase, regulates flowering time via FLOWERING LOCUS C. New Phytol. 194 (2012), 666–675.
-
(2012)
New Phytol.
, vol.194
, pp. 666-675
-
-
Wang, B.1
Jin, S.H.2
Hu, H.Q.3
Sun, Y.G.4
Wang, Y.W.5
Han, P.6
Hou, B.K.7
-
58
-
-
84948750469
-
Population genomics for understanding adaptation in wild plant species
-
Weigel, D., Nordborg, M., Population genomics for understanding adaptation in wild plant species. Annu. Rev. Genet. 49 (2015), 315–338.
-
(2015)
Annu. Rev. Genet.
, vol.49
, pp. 315-338
-
-
Weigel, D.1
Nordborg, M.2
-
59
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir, B.S., Cockerham, C.C., Estimating F-statistics for the analysis of population structure. Evolution 38 (1984), 1358–1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
60
-
-
14544306215
-
Molecular population genetics and the search for adaptive evolution in plants
-
Wright, S.I., Gaut, B.S., Molecular population genetics and the search for adaptive evolution in plants. Mol. Biol. Evol. 22 (2005), 506–519.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 506-519
-
-
Wright, S.I.1
Gaut, B.S.2
-
61
-
-
84861597739
-
A model-based approach for analysis of spatial structure in genetic data
-
Yang, W.Y., Novembre, J., Eskin, E., Halperin, E., A model-based approach for analysis of spatial structure in genetic data. Nat. Genet. 44 (2012), 725–731.
-
(2012)
Nat. Genet.
, vol.44
, pp. 725-731
-
-
Yang, W.Y.1
Novembre, J.2
Eskin, E.3
Halperin, E.4
-
62
-
-
84863003734
-
Genome-wide efficient mixed-model analysis for association studies
-
Zhou, X., Stephens, M., Genome-wide efficient mixed-model analysis for association studies. Nat. Genet. 44 (2012), 821–824.
-
(2012)
Nat. Genet.
, vol.44
, pp. 821-824
-
-
Zhou, X.1
Stephens, M.2
-
63
-
-
84926667701
-
Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
-
Zhou, Z., Jiang, Y., Wang, Z., Gou, Z., Lyu, J., Li, W., Yu, Y., Shu, L., Zhao, Y., Ma, Y., et al. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nat. Biotechnol. 33 (2015), 408–414.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 408-414
-
-
Zhou, Z.1
Jiang, Y.2
Wang, Z.3
Gou, Z.4
Lyu, J.5
Li, W.6
Yu, Y.7
Shu, L.8
Zhao, Y.9
Ma, Y.10
|