메뉴 건너뛰기




Volumn 12, Issue 1, 2016, Pages

Characterization of common carp (Cyprinus carpio L.) interferon regulatory factor 5 (IRF5) and its expression in response to viral and bacterial challenges

Author keywords

Common carp (Cyprinus carpio L.); Gene expression; IRF5; LPS; Poly I:C

Indexed keywords

COMPLEMENTARY DNA; INTERFERON REGULATORY FACTOR; LIPOPOLYSACCHARIDE; MESSENGER RNA; POLYINOSINIC POLYCYTIDYLIC ACID; TRANSCRIPTOME; TUMOR NECROSIS FACTOR;

EID: 84976489188     PISSN: None     EISSN: 17466148     Source Type: Journal    
DOI: 10.1186/s12917-016-0750-4     Document Type: Article
Times cited : (53)

References (43)
  • 1
    • 0031418944 scopus 로고    scopus 로고
    • The growing family of interferon regulatory factors
    • Nguyen H, Hiscott J, Pitha PM. The growing family of interferon regulatory factors. Cytokine Growth Factor Rev. 1997;8(4):293-312.
    • (1997) Cytokine Growth Factor Rev , vol.8 , Issue.4 , pp. 293-312
    • Nguyen, H.1    Hiscott, J.2    Pitha, P.M.3
  • 2
    • 0032130972 scopus 로고    scopus 로고
    • The role of interferon regulatory factors in the interferon system and cell growth control
    • Harada H, Taniguchi T, Tanaka N. The role of interferon regulatory factors in the interferon system and cell growth control. Biochimie. 1998;80(8-9):641-50.
    • (1998) Biochimie , vol.80 , Issue.8-9 , pp. 641-650
    • Harada, H.1    Taniguchi, T.2    Tanaka, N.3
  • 5
    • 77951794488 scopus 로고    scopus 로고
    • Global characterization of interferon regulatory factor (IRF) genes in vertebrates: glimpse of the diversification in evolution
    • Huang B, Qi ZT, Xu Z, Nie P. Global characterization of interferon regulatory factor (IRF) genes in vertebrates: glimpse of the diversification in evolution. BMC Immunol. 2010;11:22.
    • (2010) BMC Immunol. , vol.11 , pp. 22
    • Huang, B.1    Qi, Z.T.2    Xu, Z.3    Nie, P.4
  • 6
    • 34347244891 scopus 로고    scopus 로고
    • The IRF family, revisited
    • Paun A, Pitha PM. The IRF family, revisited. Biochimie. 2007;89(6-7):744-53.
    • (2007) Biochimie , vol.89 , Issue.6-7 , pp. 744-753
    • Paun, A.1    Pitha, P.M.2
  • 7
    • 0032968759 scopus 로고    scopus 로고
    • Conserved transactivation domain shared by interferon regulatory factors and Smad morphogens
    • Eroshkin A, Mushegian A. Conserved transactivation domain shared by interferon regulatory factors and Smad morphogens. J Mol Med (Berl). 1999;77(5):403-5.
    • (1999) J Mol Med (Berl) , vol.77 , Issue.5 , pp. 403-405
    • Eroshkin, A.1    Mushegian, A.2
  • 8
    • 0035968246 scopus 로고    scopus 로고
    • Virus-specific activation of a novel interferon regulatory factor, IRF-5, results in the induction of distinct interferon alpha genes
    • Barnes BJ, Moore PA, Pitha PM. Virus-specific activation of a novel interferon regulatory factor, IRF-5, results in the induction of distinct interferon alpha genes. J Biol Chem. 2001;276(26):23382-90.
    • (2001) J Biol Chem , vol.276 , Issue.26 , pp. 23382-23390
    • Barnes, B.J.1    Moore, P.A.2    Pitha, P.M.3
  • 9
    • 42649114059 scopus 로고    scopus 로고
    • The IRF family transcription factors in immunity and oncogenesis
    • Tamura T, Yanai H, Savitsky D, Taniguchi T. The IRF family transcription factors in immunity and oncogenesis. Annu Rev Immunol. 2008;26:535-84.
    • (2008) Annu Rev Immunol. , vol.26 , pp. 535-584
    • Tamura, T.1    Yanai, H.2    Savitsky, D.3    Taniguchi, T.4
  • 10
    • 33748051738 scopus 로고    scopus 로고
    • IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors
    • Honda K, Taniguchi T. IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors. Nat Rev Immunol. 2006;6(9):644-58.
    • (2006) Nat Rev Immunol , vol.6 , Issue.9 , pp. 644-658
    • Honda, K.1    Taniguchi, T.2
  • 11
    • 0036311933 scopus 로고    scopus 로고
    • Multiple regulatory domains of IRF-5 control activation, cellular localization, and induction of chemokines that mediate recruitment of T lymphocytes
    • Barnes BJ, Kellum MJ, Field AE, Pitha PM. Multiple regulatory domains of IRF-5 control activation, cellular localization, and induction of chemokines that mediate recruitment of T lymphocytes. Mol Cell Biol. 2002;22(16):5721-40.
    • (2002) Mol Cell Biol , vol.22 , Issue.16 , pp. 5721-5740
    • Barnes, B.J.1    Kellum, M.J.2    Field, A.E.3    Pitha, P.M.4
  • 12
    • 47249083830 scopus 로고    scopus 로고
    • Functional characterization of murine interferon regulatory factor 5 (IRF-5) and its role in the innate antiviral response
    • Paun A, Reinert JT, Jiang Z, Medin C, Balkhi MY, Fitzgerald KA, et al. Functional characterization of murine interferon regulatory factor 5 (IRF-5) and its role in the innate antiviral response. J Biol Chem. 2008;283(21):14295-308.
    • (2008) J Biol Chem , vol.283 , Issue.21 , pp. 14295-14308
    • Paun, A.1    Reinert, J.T.2    Jiang, Z.3    Medin, C.4    Balkhi, M.Y.5    Fitzgerald, K.A.6
  • 13
    • 15044345461 scopus 로고    scopus 로고
    • Integral role of IRF-5 in the gene induction programme activated by Toll-like receptors
    • Takaoka A, Yanai H, Kondo S, Duncan G, Negishi H, Mizutani T, et al. Integral role of IRF-5 in the gene induction programme activated by Toll-like receptors. Nature. 2005;434(7030):243-9.
    • (2005) Nature , vol.434 , Issue.7030 , pp. 243-249
    • Takaoka, A.1    Yanai, H.2    Kondo, S.3    Duncan, G.4    Negishi, H.5    Mizutani, T.6
  • 14
    • 77349125585 scopus 로고    scopus 로고
    • The gene and virus-induced expression of IRF-5 in grass carp Ctenopharyngodon idella
    • Xu QQ, Chang MX, Xiao FS, Huang B, Nie P. The gene and virus-induced expression of IRF-5 in grass carp Ctenopharyngodon idella. Vet Immunol Immunopathol. 2010;134(3-4):269-78.
    • (2010) Vet Immunol Immunopathol , vol.134 , Issue.3-4 , pp. 269-278
    • Xu, Q.Q.1    Chang, M.X.2    Xiao, F.S.3    Huang, B.4    Nie, P.5
  • 15
    • 77956929655 scopus 로고    scopus 로고
    • Characteristics of the interferon regulatory factor pairs zfIRF5/7 and their stimulation expression by ISKNV Infection in zebrafish (Danio rerio)
    • Xiang Z, Dong C, Qi L, Chen W, Huang L, Li Z, et al. Characteristics of the interferon regulatory factor pairs zfIRF5/7 and their stimulation expression by ISKNV Infection in zebrafish (Danio rerio). Dev Comp Immunol. 2010;34(12):1263-73.
    • (2010) Dev Comp Immunol , vol.34 , Issue.12 , pp. 1263-1273
    • Xiang, Z.1    Dong, C.2    Qi, L.3    Chen, W.4    Huang, L.5    Li, Z.6
  • 16
    • 77951572257 scopus 로고    scopus 로고
    • Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome
    • Leong JS, Jantzen SG, von Schalburg KR, Cooper GA, Messmer AM, Liao NY, et al. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. BMC Genomics. 2010;11:279.
    • (2010) BMC Genomics. , vol.11 , pp. 279
    • Leong, J.S.1    Jantzen, S.G.2    Schalburg, K.R.3    Cooper, G.A.4    Messmer, A.M.5    Liao, N.Y.6
  • 17
    • 84866158887 scopus 로고    scopus 로고
    • Characteristics of the interferon regulatory factor 5 (IRF5) and its expression in response to LCDV and poly I:C challenges in Japanese flounder, Paralichthys olivaceus
    • Hu GB, Lou HM, Dong XZ, Liu QM, Zhang SC. Characteristics of the interferon regulatory factor 5 (IRF5) and its expression in response to LCDV and poly I:C challenges in Japanese flounder, Paralichthys olivaceus. Dev Comp Immunol. 2012;38(2):377-82.
    • (2012) Dev Comp Immunol. , vol.38 , Issue.2 , pp. 377-382
    • Hu, G.B.1    Lou, H.M.2    Dong, X.Z.3    Liu, Q.M.4    Zhang, S.C.5
  • 18
    • 84896041961 scopus 로고    scopus 로고
    • Genomic characterization of interferon regulatory factor 5 from rock bream (Oplegnathus fasciatus) and its role in antiviral defense
    • Wickramaarachchi WD, Wan Q, Lim BS, Jung HB, De Zoysa M, Park MA, et al. Genomic characterization of interferon regulatory factor 5 from rock bream (Oplegnathus fasciatus) and its role in antiviral defense. Fish Shellfish Immunol. 2014;37(2):256-67.
    • (2014) Fish Shellfish Immunol , vol.37 , Issue.2 , pp. 256-267
    • Wickramaarachchi, W.D.1    Wan, Q.2    Lim, B.S.3    Jung, H.B.4    Zoysa, M.5    Park, M.A.6
  • 19
    • 84924980353 scopus 로고    scopus 로고
    • Molecular characterization and expression analysis of eleven interferon regulatory factors in half-smooth tongue sole, Cynoglossus semilaevis
    • Zhang J, Li YX, Hu YH. Molecular characterization and expression analysis of eleven interferon regulatory factors in half-smooth tongue sole, Cynoglossus semilaevis. Fish Shellfish Immunol. 2015;44(1):272-82.
    • (2015) Fish Shellfish Immunol. , vol.44 , Issue.1 , pp. 272-282
    • Zhang, J.1    Li, Y.X.2    Hu, Y.H.3
  • 20
    • 84874199636 scopus 로고    scopus 로고
    • Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote
    • Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, et al. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. BMC Genomics. 2012;13:595.
    • (2012) BMC Genomics. , vol.13 , pp. 595
    • Liu, S.1    Zhang, Y.2    Zhou, Z.3    Waldbieser, G.4    Sun, F.5    Lu, J.6
  • 21
    • 80054919788 scopus 로고    scopus 로고
    • Molecular cloning and characterization of interferon regulatory factor 1 (IRF-1), IRF-2 and IRF-5 in the chondrostean paddlefish Polyodon spathula and their phylogenetic importance in the Osteichthyes
    • Xiaoni G, Zhuo C, Xuzhen W, Dengqiang W, Xinwen C. Molecular cloning and characterization of interferon regulatory factor 1 (IRF-1), IRF-2 and IRF-5 in the chondrostean paddlefish Polyodon spathula and their phylogenetic importance in the Osteichthyes. Dev Comp Immunol. 2012;36(1):74-84.
    • (2012) Dev Comp Immunol , vol.36 , Issue.1 , pp. 74-84
    • Xiaoni, G.1    Zhuo, C.2    Xuzhen, W.3    Dengqiang, W.4    Xinwen, C.5
  • 22
    • 79953298466 scopus 로고    scopus 로고
    • Expression profiles of carp IRF-3/-7 correlate with the up-regulation of RIG-I/MAVS/TRAF3/TBK1, four pivotal molecules in RIG-I signaling pathway
    • Feng H, Liu H, Kong R, Wang L, Wang Y, Hu W, et al. Expression profiles of carp IRF-3/-7 correlate with the up-regulation of RIG-I/MAVS/TRAF3/TBK1, four pivotal molecules in RIG-I signaling pathway. Fish Shellfish Immunol. 2011;30(4-5):1159-69.
    • (2011) Fish Shellfish Immunol , vol.30 , Issue.4-5 , pp. 1159-1169
    • Feng, H.1    Liu, H.2    Kong, R.3    Wang, L.4    Wang, Y.5    Hu, W.6
  • 23
    • 84858136264 scopus 로고    scopus 로고
    • Feeding Cyprinus carpio with infectious materials mediates cyprinid herpesvirus 3 entry through infection of pharyngeal periodontal mucosa
    • Fournier G, Boutier M, Stalin Raj V, Mast J, Parmentier E, Vanderwalle P, et al. Feeding Cyprinus carpio with infectious materials mediates cyprinid herpesvirus 3 entry through infection of pharyngeal periodontal mucosa. Vet Res. 2012;43:6.
    • (2012) Vet Res. , vol.43 , pp. 6
    • Fournier, G.1    Boutier, M.2    Stalin Raj, V.3    Mast, J.4    Parmentier, E.5    Vanderwalle, P.6
  • 24
    • 84976463805 scopus 로고    scopus 로고
    • NCBI [ http://www.ncbi.nlm.nih.gov/blast ].
  • 25
    • 84976495568 scopus 로고    scopus 로고
    • SMART [ http://smart.embl-heidelberg.de/ ].
  • 26
    • 84857403137 scopus 로고    scopus 로고
    • Effects of neurotoxin - anatoxin-a on common carp (Cyprinus carpio L.) innate immune cells in vitro
    • Rymuszka A, Sieroslawska A. Effects of neurotoxin - anatoxin-a on common carp (Cyprinus carpio L.) innate immune cells in vitro. Neuro endocrinology letters. 2011;32 Suppl 1:84-8.
    • (2011) Neuro endocrinology letters , vol.32 , pp. 84-88
    • Rymuszka, A.1    Sieroslawska, A.2
  • 27
    • 0035154739 scopus 로고    scopus 로고
    • Regulation of interleukin 1 beta RNA expression in the common carp, Cyprinus carpio L
    • Engelsma MY, Stet RJ, Schipper H, Verburg-van Kemenade BM. Regulation of interleukin 1 beta RNA expression in the common carp, Cyprinus carpio L. Dev Comp Immunol. 2001;25(3):195-203.
    • (2001) Dev Comp Immunol , vol.25 , Issue.3 , pp. 195-203
    • Engelsma, M.Y.1    Stet, R.J.2    Schipper, H.3    Verburg-van Kemenade, B.M.4
  • 28
    • 0031933646 scopus 로고    scopus 로고
    • Structure of IRF-1 with bound DNA reveals determinants of interferon regulation
    • Escalante CR, Yie J, Thanos D, Aggarwal AK. Structure of IRF-1 with bound DNA reveals determinants of interferon regulation. Nature. 1998;391(6662):103-6.
    • (1998) Nature , vol.391 , Issue.6662 , pp. 103-106
    • Escalante, C.R.1    Yie, J.2    Thanos, D.3    Aggarwal, A.K.4
  • 29
    • 0032915860 scopus 로고    scopus 로고
    • Structural and functional analysis of interferon regulatory factor 3: localization of the transactivation and autoinhibitory domains
    • Lin R, Mamane Y, Hiscott J. Structural and functional analysis of interferon regulatory factor 3: localization of the transactivation and autoinhibitory domains. Mol Cell Biol. 1999;19(4):2465-74.
    • (1999) Mol Cell Biol , vol.19 , Issue.4 , pp. 2465-2474
    • Lin, R.1    Mamane, Y.2    Hiscott, J.3
  • 30
    • 55549138004 scopus 로고    scopus 로고
    • Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5
    • Chen W, Lam SS, Srinath H, Jiang Z, Correia JJ, Schiffer CA, et al. Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5. Nat Struct Mol Biol. 2008;15(11):1213-20.
    • (2008) Nat Struct Mol Biol , vol.15 , Issue.11 , pp. 1213-1220
    • Chen, W.1    Lam, S.S.2    Srinath, H.3    Jiang, Z.4    Correia, J.J.5    Schiffer, C.A.6
  • 31
    • 0032102913 scopus 로고    scopus 로고
    • Molecular cloning of a novel interferon regulatory factor in Japanese flounder, Paralichthys olivaceus
    • Yabu T, Hirose H, Hirono I, Katagiri T, Aoki T, Yamamoto E. Molecular cloning of a novel interferon regulatory factor in Japanese flounder, Paralichthys olivaceus. Mol Mar Biol Biotechnol. 1998;7(2):138-44.
    • (1998) Mol Mar Biol Biotechnol. , vol.7 , Issue.2 , pp. 138-144
    • Yabu, T.1    Hirose, H.2    Hirono, I.3    Katagiri, T.4    Aoki, T.5    Yamamoto, E.6
  • 32
    • 0034803916 scopus 로고    scopus 로고
    • Molecular cloning and genomic structure of a gene encoding interferon regulatory factor in the pufferfish (Fugu rubripes)
    • Richardson MP, Tay BH, Goh BY, Venkatesh B, Brenner S. Molecular cloning and genomic structure of a gene encoding interferon regulatory factor in the pufferfish (Fugu rubripes). Mar Biotechnol (NY). 2001;3(2):145-51.
    • (2001) Mar Biotechnol (NY) , vol.3 , Issue.2 , pp. 145-151
    • Richardson, M.P.1    Tay, B.H.2    Goh, B.Y.3    Venkatesh, B.4    Brenner, S.5
  • 33
    • 33748424158 scopus 로고    scopus 로고
    • Gene structure and transcription of IRF-2 in the mandarin fish Siniperca chuatsi with the finding of alternative transcripts and microsatellite in the coding region
    • Sun B, Chang M, Chen D, Nie P. Gene structure and transcription of IRF-2 in the mandarin fish Siniperca chuatsi with the finding of alternative transcripts and microsatellite in the coding region. Immunogenetics. 2006;58(9):774-84.
    • (2006) Immunogenetics , vol.58 , Issue.9 , pp. 774-784
    • Sun, B.1    Chang, M.2    Chen, D.3    Nie, P.4
  • 34
    • 36448959788 scopus 로고    scopus 로고
    • Molecular characterization and subcellular localization of Carassius auratus interferon regulatory factor-1
    • Shi Y, Zhang YB, Zhao Z, Jiang J, Zhang QY, Gui JF. Molecular characterization and subcellular localization of Carassius auratus interferon regulatory factor-1. Dev Comp Immunol. 2008;32(2):134-46.
    • (2008) Dev Comp Immunol , vol.32 , Issue.2 , pp. 134-146
    • Shi, Y.1    Zhang, Y.B.2    Zhao, Z.3    Jiang, J.4    Zhang, Q.Y.5    Gui, J.F.6
  • 35
    • 77955057578 scopus 로고    scopus 로고
    • Molecular cloning and characterization of interferon regulatory factors 4 and 8 (IRF-4 and IRF-8) in rainbow trout, Oncorhynchus mykiss
    • Holland JW, Karim A, Wang T, Alnabulsi A, Scott J, Collet B, et al. Molecular cloning and characterization of interferon regulatory factors 4 and 8 (IRF-4 and IRF-8) in rainbow trout, Oncorhynchus mykiss. Fish Shellfish Immunol. 2010;29(1):157-66.
    • (2010) Fish Shellfish Immunol. , vol.29 , Issue.1 , pp. 157-166
    • Holland, J.W.1    Karim, A.2    Wang, T.3    Alnabulsi, A.4    Scott, J.5    Collet, B.6
  • 36
    • 84859232949 scopus 로고    scopus 로고
    • Molecular characterization and expression analysis of interferon regulatory factor 5 (IRF-5) in turbot, Scophthalmus maximus
    • Xia J, Hu GB, Dong XZ, Liu QM, Zhang SC. Molecular characterization and expression analysis of interferon regulatory factor 5 (IRF-5) in turbot, Scophthalmus maximus. Fish Shellfish Immunol. 2012;32(1):211-8.
    • (2012) Fish Shellfish Immunol. , vol.32 , Issue.1 , pp. 211-218
    • Xia, J.1    Hu, G.B.2    Dong, X.Z.3    Liu, Q.M.4    Zhang, S.C.5
  • 37
    • 22844435410 scopus 로고    scopus 로고
    • Innate immunity of fish (overview)
    • Magnadottir B. Innate immunity of fish (overview). Fish Shellfish Immunol. 2006;20(2):137-51.
    • (2006) Fish Shellfish Immunol , vol.20 , Issue.2 , pp. 137-151
    • Magnadottir, B.1
  • 38
    • 77957753969 scopus 로고    scopus 로고
    • Molecular cloning and characterization of interferon regulatory factor 7 (IRF-7) in Japanese flounder, Paralichthys olivaceus
    • Hu G, Yin X, Xia J, Dong X, Zhang J, Liu Q. Molecular cloning and characterization of interferon regulatory factor 7 (IRF-7) in Japanese flounder, Paralichthys olivaceus. Fish Shellfish Immunol. 2010;29(6):963-71.
    • (2010) Fish Shellfish Immunol. , vol.29 , Issue.6 , pp. 963-971
    • Hu, G.1    Yin, X.2    Xia, J.3    Dong, X.4    Zhang, J.5    Liu, Q.6
  • 39
    • 81255136212 scopus 로고    scopus 로고
    • An IRF-3 homolog that is up-regulated by DNA virus and poly I:C in turbot, Scophthalmus maximus
    • Hu GB, Xia J, Lou HM, Chen XL, Li J, Liu QM. An IRF-3 homolog that is up-regulated by DNA virus and poly I:C in turbot, Scophthalmus maximus. Fish Shellfish Immunol. 2011;31(6):1224-31.
    • (2011) Fish Shellfish Immunol. , vol.31 , Issue.6 , pp. 1224-1231
    • Hu, G.B.1    Xia, J.2    Lou, H.M.3    Chen, X.L.4    Li, J.5    Liu, Q.M.6
  • 41
    • 33748875713 scopus 로고    scopus 로고
    • B lymphocytes from early vertebrates have potent phagocytic and microbicidal abilities
    • Li J, Barreda DR, Zhang YA, Boshra H, Gelman AE, Lapatra S, et al. B lymphocytes from early vertebrates have potent phagocytic and microbicidal abilities. Nat Immunol. 2006;7(10):1116-24.
    • (2006) Nat Immunol , vol.7 , Issue.10 , pp. 1116-1124
    • Li, J.1    Barreda, D.R.2    Zhang, Y.A.3    Boshra, H.4    Gelman, A.E.5    Lapatra, S.6
  • 42
    • 59149091466 scopus 로고    scopus 로고
    • IRF-5 is a mediator of the death receptor-induced apoptotic signaling pathway
    • Hu G, Barnes BJ. IRF-5 is a mediator of the death receptor-induced apoptotic signaling pathway. J Biol Chem. 2009;284(5):2767-77.
    • (2009) J Biol Chem , vol.284 , Issue.5 , pp. 2767-2777
    • Hu, G.1    Barnes, B.J.2
  • 43
    • 0141919557 scopus 로고    scopus 로고
    • Interferon regulatory factor 5, a novel mediator of cell cycle arrest and cell death
    • Barnes BJ, Kellum MJ, Pinder KE, Frisancho JA, Pitha PM. Interferon regulatory factor 5, a novel mediator of cell cycle arrest and cell death. Cancer Res. 2003;63(19):6424-31.
    • (2003) Cancer Res , vol.63 , Issue.19 , pp. 6424-6431
    • Barnes, B.J.1    Kellum, M.J.2    Pinder, K.E.3    Frisancho, J.A.4    Pitha, P.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.