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Volumn 36, Issue 1, 2012, Pages 74-84

Molecular cloning and characterization of interferon regulatory factor 1 (IRF-1), IRF-2 and IRF-5 in the chondrostean paddlefish Polyodon spathula and their phylogenetic importance in the Osteichthyes

Author keywords

IFN; Innate immunity; Phylogeny; Polyodon spathula; PsIRF 1; PsIRF 2; PsIRF 5

Indexed keywords

INTERFERON REGULATORY FACTOR 1; INTERFERON REGULATORY FACTOR 2; INTERFERON REGULATORY FACTOR 5;

EID: 80054919788     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2011.06.003     Document Type: Article
Times cited : (30)

References (28)
  • 1
    • 0035968246 scopus 로고    scopus 로고
    • Virus-specific activation of a novel interferon regulatory factor, IRF-5, results in the induction of distinct interferon alpha genes
    • Barnes B.J., Moore P.A., Pitha P.M. Virus-specific activation of a novel interferon regulatory factor, IRF-5, results in the induction of distinct interferon alpha genes. J. Biol. Chem. 2001, 276(26):23382-23390.
    • (2001) J. Biol. Chem. , vol.276 , Issue.26 , pp. 23382-23390
    • Barnes, B.J.1    Moore, P.A.2    Pitha, P.M.3
  • 2
    • 0036311933 scopus 로고    scopus 로고
    • Multiple regulatory domains of IRF-5 control activation, cellular localization and induction of chemokines that mediate T-lymphocyte recruitment
    • Barnes B.J., Kellum M.J., Field A.E., Pitha P.M. Multiple regulatory domains of IRF-5 control activation, cellular localization and induction of chemokines that mediate T-lymphocyte recruitment. Mol. Cell. Biol. 2002, 22:5721-5740.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 5721-5740
    • Barnes, B.J.1    Kellum, M.J.2    Field, A.E.3    Pitha, P.M.4
  • 3
    • 85190487463 scopus 로고    scopus 로고
    • Forelimb-hindlimb developmental timing changes across tetrapod. Oct. 1, 7:
    • Bininda-Emonds et al., 2007. Forelimb-hindlimb developmental timing changes across tetrapod. Oct. 1, 7: 182.
    • (2007) , pp. 182
    • Bininda-Emonds1
  • 4
    • 0346139366 scopus 로고
    • Ovalbumin gene: evidence for a leader sequence in mRNA and DNA sequences at the exon-intron boundaries
    • Breathnach R., Benoist C., O'Hare K., Gannon F., Chambon P. Ovalbumin gene: evidence for a leader sequence in mRNA and DNA sequences at the exon-intron boundaries. Proc. Natl. Acad. Sci. U.S.A. 1978, 75:4853-4857.
    • (1978) Proc. Natl. Acad. Sci. U.S.A. , vol.75 , pp. 4853-4857
    • Breathnach, R.1    Benoist, C.2    O'Hare, K.3    Gannon, F.4    Chambon, P.5
  • 5
    • 0032968759 scopus 로고    scopus 로고
    • Conserved transactivation domain shared by interferon regulatory factors and Smad morphogens
    • Eroshkin A., Mushegian A. Conserved transactivation domain shared by interferon regulatory factors and Smad morphogens. J. Mol. Med. 1999, 77:403-405.
    • (1999) J. Mol. Med. , vol.77 , pp. 403-405
    • Eroshkin, A.1    Mushegian, A.2
  • 6
    • 0025133472 scopus 로고
    • Tetraopod phylogeny inferred from 18S and 28 S rRNA sequences and a review of the evidence for ammiote relationship
    • Hedges, et al. Tetraopod phylogeny inferred from 18S and 28 S rRNA sequences and a review of the evidence for ammiote relationship. MBE. 1990, 7:607.
    • (1990) MBE. , vol.7 , pp. 607
    • Hedges1
  • 7
    • 33748051738 scopus 로고    scopus 로고
    • IRFs: master regulators of signaling by Toll-like receptors and cytosolic pattern-recognition receptors
    • Honda K., Taniguchi T. IRFs: master regulators of signaling by Toll-like receptors and cytosolic pattern-recognition receptors. Nat. Rev. Immunol. 2006, 6:644-658.
    • (2006) Nat. Rev. Immunol. , vol.6 , pp. 644-658
    • Honda, K.1    Taniguchi, T.2
  • 8
    • 12244307474 scopus 로고    scopus 로고
    • Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the " ancient fish"
    • Inoue J.G., Miya M., Tsukamoto K., Nishida M. Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the " ancient fish" Mol. Phyl. Evo. 2003, 26:110-120.
    • (2003) Mol. Phyl. Evo. , vol.26 , pp. 110-120
    • Inoue, J.G.1    Miya, M.2    Tsukamoto, K.3    Nishida, M.4
  • 9
    • 40149089981 scopus 로고    scopus 로고
    • Gene structures and promoter characteristics of interferon regulatory factor 1 (IRF-1), IRF-2 and IRF-7 from snakehead Channa argus
    • Jia W., Guo Q. Gene structures and promoter characteristics of interferon regulatory factor 1 (IRF-1), IRF-2 and IRF-7 from snakehead Channa argus. Mol. Immunol. 2008, 45:2419-2428.
    • (2008) Mol. Immunol. , vol.45 , pp. 2419-2428
    • Jia, W.1    Guo, Q.2
  • 11
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2-δδCT method
    • Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2-δδCT method. Methods. 2001, 25:402-408.
    • (2001) Methods. , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 12
    • 0029812867 scopus 로고    scopus 로고
    • Interferon regulatory factor 2 directs transcription from the gp91phox promoter
    • Luo W., Skalnik D.G. Interferon regulatory factor 2 directs transcription from the gp91phox promoter. J. Biol. Chem. 1996, 271:23445-23451.
    • (1996) J. Biol. Chem. , vol.271 , pp. 23445-23451
    • Luo, W.1    Skalnik, D.G.2
  • 14
    • 0036091477 scopus 로고    scopus 로고
    • A novel interferon regulatory factor (IRF), IRF-10, has a unique role in immune defense and is induced by the v-Rel oncoprotein
    • Nehyba J., Hrdlickova R., Burnside J., Bose H.R. A novel interferon regulatory factor (IRF), IRF-10, has a unique role in immune defense and is induced by the v-Rel oncoprotein. Mol. Cell. Biol. 2002, 22:3942-3957.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 3942-3957
    • Nehyba, J.1    Hrdlickova, R.2    Burnside, J.3    Bose, H.R.4
  • 16
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: testing the model of DNA substitution
    • Posada D., Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 17
    • 0041386108 scopus 로고    scopus 로고
    • MrBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003, 19:1572-1574.
    • (2003) Bioinformatics. , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 18
    • 77951891154 scopus 로고    scopus 로고
    • Identification and characterization of interferon regulatory factor-1 from orange-spotted grouper (Epinephelus coioides)
    • Shi Y., Zhu X.P., Yin J.K., Zhang Q.Y., Gui J.F. Identification and characterization of interferon regulatory factor-1 from orange-spotted grouper (Epinephelus coioides). Mol. Biol. Rep. 2008, 37:1483-1493.
    • (2008) Mol. Biol. Rep. , vol.37 , pp. 1483-1493
    • Shi, Y.1    Zhu, X.P.2    Yin, J.K.3    Zhang, Q.Y.4    Gui, J.F.5
  • 19
    • 33748424158 scopus 로고    scopus 로고
    • Gene structure and transcription of IRF-2 in the mandarin fish Siniperca chuatsi with the finding of alternative transcripts and microsatellite in the coding region
    • Sun B., Chang M., Chen D., Nie P. Gene structure and transcription of IRF-2 in the mandarin fish Siniperca chuatsi with the finding of alternative transcripts and microsatellite in the coding region. Immunogenetics. 2006, 58:774-784.
    • (2006) Immunogenetics. , vol.58 , pp. 774-784
    • Sun, B.1    Chang, M.2    Chen, D.3    Nie, P.4
  • 20
    • 42649114059 scopus 로고    scopus 로고
    • The IRF family transcription factors in immunity and oncogenesis
    • Tamura T., Yanai H., Savitsky D., et al. The IRF family transcription factors in immunity and oncogenesis. Annu. Rev. Immunol. 2008, 26:535-584.
    • (2008) Annu. Rev. Immunol. , vol.26 , pp. 535-584
    • Tamura, T.1    Yanai, H.2    Savitsky, D.3
  • 21
    • 18644382503 scopus 로고    scopus 로고
    • IFN regulatory factor-2 deficiency revealed a novel checkpoint critical for the generation of peripheral NK cells
    • Taki S., Nakajima S., Ichikawa E., Saito T., Hida S. IFN regulatory factor-2 deficiency revealed a novel checkpoint critical for the generation of peripheral NK cells. J. Immunol. 2005, 174:6005-6012.
    • (2005) J. Immunol. , vol.174 , pp. 6005-6012
    • Taki, S.1    Nakajima, S.2    Ichikawa, E.3    Saito, T.4    Hida, S.5
  • 22
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface. flexible strategies for 938 multiple sequences alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The Clustal X windows interface. flexible strategies for 938 multiple sequences alignment aided by quality analysis tools. Nucleic Acids Res. 1997, 25:4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 24
    • 0037213718 scopus 로고    scopus 로고
    • The IRF-2 DNA binding domain facilitates the activation of the class II transactivator (CIITA) type IV promoter by IRF-1
    • Xi H., Blanck G. The IRF-2 DNA binding domain facilitates the activation of the class II transactivator (CIITA) type IV promoter by IRF-1. Mol. Immunol. 2003, 39:677-684.
    • (2003) Mol. Immunol. , vol.39 , pp. 677-684
    • Xi, H.1    Blanck, G.2
  • 25
    • 0038487293 scopus 로고    scopus 로고
    • 18S ribosomal RNA and Tetrapod Phylogeny
    • Xia X.H., Xie Z., Kjer K.M. 18S ribosomal RNA and Tetrapod Phylogeny. Systematic Biology. 2003, 52:283-295.
    • (2003) Systematic Biology. , vol.52 , pp. 283-295
    • Xia, X.H.1    Xie, Z.2    Kjer, K.M.3
  • 26
    • 77349125585 scopus 로고    scopus 로고
    • The gene and virus-induced expression of IRF-5 in grass carp Ctenopharyngodon idella
    • Xu Q.Q., Chang M.X., Xiao F.S., Huang B., Nie P. The gene and virus-induced expression of IRF-5 in grass carp Ctenopharyngodon idella. Vet. Immunol. Immunopathol. 2010, 134:269-278.
    • (2010) Vet. Immunol. Immunopathol. , vol.134 , pp. 269-278
    • Xu, Q.Q.1    Chang, M.X.2    Xiao, F.S.3    Huang, B.4    Nie, P.5
  • 27
    • 80054948619 scopus 로고    scopus 로고
    • The Origin and Diversification of Osteichthyans and Sarcopterygians: Rare Chinese Fossil Findings Advance Research on Key Issues of Evolution
    • Yu X., Zhu M., Zhao W. The Origin and Diversification of Osteichthyans and Sarcopterygians: Rare Chinese Fossil Findings Advance Research on Key Issues of Evolution. BCAS, Paleoichthyology 2010, 24:71-75.
    • (2010) BCAS, Paleoichthyology , vol.24 , pp. 71-75
    • Yu, X.1    Zhu, M.2    Zhao, W.3
  • 28
    • 0345393132 scopus 로고    scopus 로고
    • Molecular cloning and characterization of crucian carp (Carassius auratus L.) interferon regulatory factor 7
    • Zhang Y.B., Hu C.Y., Zhang J., Huang G.P., Wei L.H., Zhang Q.Y., Gui J.F. Molecular cloning and characterization of crucian carp (Carassius auratus L.) interferon regulatory factor 7. Fish Shellfish Immunol 2003, 15:453-466.
    • (2003) Fish Shellfish Immunol , vol.15 , pp. 453-466
    • Zhang, Y.B.1    Hu, C.Y.2    Zhang, J.3    Huang, G.P.4    Wei, L.H.5    Zhang, Q.Y.6    Gui, J.F.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.