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Volumn 115, Issue 10, 2016, Pages 3905-3911

Improving detection of avian malaria from host blood: a step towards a standardised protocol for diagnostics

Author keywords

Avian malaria; Elution; Extraction; PCR; Plasmodium; Qiagen

Indexed keywords

PROTOZOAL DNA; SILICON DIOXIDE;

EID: 84973161039     PISSN: 09320113     EISSN: 14321955     Source Type: Journal    
DOI: 10.1007/s00436-016-5157-4     Document Type: Article
Times cited : (5)

References (41)
  • 1
    • 0028674028 scopus 로고
    • Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification
    • COI: 1:CAS:528:DyaK2MXhtFCrsA%3D%3D, PID: 8195750
    • Akane A, Matsubara K, Nakamura H, Takahashi S, Kimura K (1994) Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification. J Forensic Sci 39:362–372. doi:10.1520/JFS13607J
    • (1994) J Forensic Sci , vol.39 , pp. 362-372
    • Akane, A.1    Matsubara, K.2    Nakamura, H.3    Takahashi, S.4    Kimura, K.5
  • 2
    • 84858446910 scopus 로고    scopus 로고
    • Forensic implications of PCR inhibition—a review
    • COI: 1:CAS:528:DC%2BC38XktlKrur0%3D, PID: 21917539
    • Alaeddini R (2012) Forensic implications of PCR inhibition—a review. Forensic Sci Int Genet 6:297–305. doi:10.1016/j.fsigen.2011.08.006
    • (2012) Forensic Sci Int Genet , vol.6 , pp. 297-305
    • Alaeddini, R.1
  • 3
    • 54949108610 scopus 로고    scopus 로고
    • An outbreak of avian malaria in captive yellowheads/mohua (Mohoua ochrocephala)
    • COI: 1:STN:280:DC%2BD1cnktl2ksQ%3D%3D, PID: 18836507
    • Alley M, Fairley R, Martin D, Howe L, Atkinson T (2008) An outbreak of avian malaria in captive yellowheads/mohua (Mohoua ochrocephala). N Z Vet J 56:247–251. doi:10.1080/00480169.2008.36842
    • (2008) N Z Vet J , vol.56 , pp. 247-251
    • Alley, M.1    Fairley, R.2    Martin, D.3    Howe, L.4    Atkinson, T.5
  • 4
    • 77957332461 scopus 로고    scopus 로고
    • Concurrent avian malaria and avipox virus infection in translocated South Island saddlebacks (Philesturnus carunculatus carunculatus)
    • COI: 1:STN:280:DC%2BC3cjhslGltw%3D%3D, PID: 20676161
    • Alley M, Hale K, Cash W, Ha H, Howe L (2010) Concurrent avian malaria and avipox virus infection in translocated South Island saddlebacks (Philesturnus carunculatus carunculatus). N Z Vet J 58:218–223. doi:10.1080/00480169.2010.68868
    • (2010) N Z Vet J , vol.58 , pp. 218-223
    • Alley, M.1    Hale, K.2    Cash, W.3    Ha, H.4    Howe, L.5
  • 5
    • 0035126283 scopus 로고    scopus 로고
    • Purification and characterization of PCR-inhibitory components in blood cells
    • COI: 1:CAS:528:DC%2BD3MXhtlGrtLY%3D, PID: 11158094
    • Al-soud WA, Rådström P (2001) Purification and characterization of PCR-inhibitory components in blood cells. J Clin Microbiol 39:485–493. doi:10.1128/JCM.39.2.485
    • (2001) J Clin Microbiol , vol.39 , pp. 485-493
    • Al-soud, W.A.1    Rådström, P.2
  • 6
    • 77954532365 scopus 로고    scopus 로고
    • Avian malaria Plasmodium relictum in native Hawaiian forest birds: epizootiology and demographic impacts on’apapane Himatione sanguinea
    • Atkinson CT, Samuel MD (2010) Avian malaria Plasmodium relictum in native Hawaiian forest birds: epizootiology and demographic impacts on’apapane Himatione sanguinea. J Avian Biol 41:357–366. doi:10.1111/j.1600-048X.2009.04915.x
    • (2010) J Avian Biol , vol.41 , pp. 357-366
    • Atkinson, C.T.1    Samuel, M.D.2
  • 7
    • 84903786664 scopus 로고    scopus 로고
    • Changing climate and the altitudinal range of avian malaria in the Hawaiian Islands—an ongoing conservation crisis on the island of Kaua’i
    • PID: 24446093
    • Atkinson CT, Utzurrum RB, LaPointe DA, Camp RJ, Crampton LH, Foster JT, Giambelluca TW (2014) Changing climate and the altitudinal range of avian malaria in the Hawaiian Islands—an ongoing conservation crisis on the island of Kaua’i. Glob Chang Biol 20:2426–2436. doi:10.1111/gcb.12535
    • (2014) Glob Chang Biol , vol.20 , pp. 2426-2436
    • Atkinson, C.T.1    Utzurrum, R.B.2    LaPointe, D.A.3    Camp, R.J.4    Crampton, L.H.5    Foster, J.T.6    Giambelluca, T.W.7
  • 8
    • 0026336087 scopus 로고
    • Pathogenicity and epizootiology of avian haematozoa: Plasmodium, Leucocytozoan, and Haemoproteus
    • Loye JE, Zuk M, (eds), Oxford Univ Press, Oxford
    • Atkinson CT, Van Riper C (1991) Pathogenicity and epizootiology of avian haematozoa: Plasmodium, Leucocytozoan, and Haemoproteus. In: Loye JE, Zuk M (eds) Bird-parasite interactions: ecology, evolution, and behaviour. Oxford Univ Press, Oxford, pp 19–48
    • (1991) Bird-parasite interactions: ecology, evolution, and behaviour , pp. 19-48
    • Atkinson, C.T.1    Van Riper, C.2
  • 9
    • 2642663514 scopus 로고    scopus 로고
    • Myoglobin as a polymerase chain reaction (PCR) inhibitor: a limitation for PCR from skeletal muscle tissue avoided by the use of thermus thermophilus polymerase
    • PID: 9655125
    • Bélec L, Authier J, Eliezer-Vanerot MC, Piédouillet C, Mohamed AS, Gherardi RK (1998) Myoglobin as a polymerase chain reaction (PCR) inhibitor: a limitation for PCR from skeletal muscle tissue avoided by the use of thermus thermophilus polymerase. Muscle Nerve 21:1064–1067. doi:10.1002/(SICI)1097-4598(199808)21:8<1064::AID-MUS11>3.0.CO;2-U
    • (1998) Muscle Nerve , vol.21 , pp. 1064-1067
    • Bélec, L.1    Authier, J.2    Eliezer-Vanerot, M.C.3    Piédouillet, C.4    Mohamed, A.S.5    Gherardi, R.K.6
  • 10
    • 84055191570 scopus 로고    scopus 로고
    • Presence and seasonal prevalence of Plasmodium spp. in a rare endemic New Zealand passerine (tieke or Saddleback, Philesturnus carunculatus)
    • PID: 22102656
    • Castro I, Howe L, Tompkins DM, Barraclough RK, Slaney D (2011) Presence and seasonal prevalence of Plasmodium spp. in a rare endemic New Zealand passerine (tieke or Saddleback, Philesturnus carunculatus). J Wildl Dis 47:860–7. doi:10.7589/0090-3558-47.4.860
    • (2011) J Wildl Dis , vol.47 , pp. 860-867
    • Castro, I.1    Howe, L.2    Tompkins, D.M.3    Barraclough, R.K.4    Slaney, D.5
  • 11
    • 33751320917 scopus 로고    scopus 로고
    • Noncoding mitochondrial loci for corals
    • COI: 1:CAS:528:DC%2BD2sXmvVSgtQ%3D%3D
    • Concepcion GT, Medina M, Toonen RJ (2006) Noncoding mitochondrial loci for corals. Mol Ecol Notes 6:1208–1211. doi:10.1111/j.1471-8286.2006.01493.x
    • (2006) Mol Ecol Notes , vol.6 , pp. 1208-1211
    • Concepcion, G.T.1    Medina, M.2    Toonen, R.J.3
  • 12
    • 84906085012 scopus 로고    scopus 로고
    • Comparison of DNA extraction kits and modification of DNA elution procedure for the quantitation of subdominant bacteria from piggery effluents with real-time PCR
    • COI: 1:CAS:528:DC%2BC2cXhtlOntLvI, PID: 24838631
    • Desneux J, Pourcher A (2014) Comparison of DNA extraction kits and modification of DNA elution procedure for the quantitation of subdominant bacteria from piggery effluents with real-time PCR. Microbiologyopen 3:437–445. doi:10.1002/mbo3.178
    • (2014) Microbiologyopen , vol.3 , pp. 437-445
    • Desneux, J.1    Pourcher, A.2
  • 13
    • 0031660552 scopus 로고    scopus 로고
    • Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate
    • COI: 1:CAS:528:DyaK1cXmtlels7w%3D, PID: 9738025
    • Fredricks DN, Relman DA (1998) Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate. J Clin Microbiol 36:2810–2816
    • (1998) J Clin Microbiol , vol.36 , pp. 2810-2816
    • Fredricks, D.N.1    Relman, D.A.2
  • 14
    • 33646874551 scopus 로고    scopus 로고
    • DNA quality and accuracy of avian malaria PCR diagnostics: a review
    • Freed L, Cann R (2006) DNA quality and accuracy of avian malaria PCR diagnostics: a review. Condor 108:459–473. doi:10.1650/0010-5422(2006)108[459:DQAAOA]2.0.CO;2
    • (2006) Condor , vol.108 , pp. 459-473
    • Freed, L.1    Cann, R.2
  • 15
    • 80052947624 scopus 로고    scopus 로고
    • Evaluation of Beta corolliflora for resistance to curly top in Idaho
    • Gillen A, Strausbaugh C, Tindall K (2008) Evaluation of Beta corolliflora for resistance to curly top in Idaho. J Sugar Beet Res 45:99–118
    • (2008) J Sugar Beet Res , vol.45 , pp. 99-118
    • Gillen, A.1    Strausbaugh, C.2    Tindall, K.3
  • 16
    • 84878114789 scopus 로고    scopus 로고
    • Re-evaluation of the Doriopsilla areolata Bergh, 1880 (Mollusca: Opisthobranchia) subspecies complex in the eastern Atlantic Ocean and its relationship to South African Doriopsilla miniata (Alder & Hancock, 1864) based on molecular data
    • Goodheart J, Valdés Á (2012) Re-evaluation of the Doriopsilla areolata Bergh, 1880 (Mollusca: Opisthobranchia) subspecies complex in the eastern Atlantic Ocean and its relationship to South African Doriopsilla miniata (Alder & Hancock, 1864) based on molecular data. Mar Biodivers 43:113–120. doi:10.1007/s12526-012-0136-1
    • (2012) Mar Biodivers , vol.43 , pp. 113-120
    • Goodheart, J.1    Valdés, Á.2
  • 17
    • 4344578955 scopus 로고    scopus 로고
    • A new PCR assay for simultaneous studies of Leucocytozoon, Plasmodium, and Haemoproteus from avian blood
    • COI: 1:CAS:528:DC%2BD2cXnvVyjs78%3D, PID: 15357072
    • Hellgren O, Waldenstrom J, Bensch S (2004) A new PCR assay for simultaneous studies of Leucocytozoon, Plasmodium, and Haemoproteus from avian blood. J Parasitol 90:797–802. doi:10.1645/GE-184R1
    • (2004) J Parasitol , vol.90 , pp. 797-802
    • Hellgren, O.1    Waldenstrom, J.2    Bensch, S.3
  • 18
    • 21644460598 scopus 로고    scopus 로고
    • End labeling procedures: an overview
    • COI: 1:CAS:528:DC%2BD2cXot1CmtLo%3D, PID: 15456965
    • Hilario E (2004) End labeling procedures: an overview. Mol Biotechnol 28:77–80. doi:10.1385/MB:28:1:77
    • (2004) Mol Biotechnol , vol.28 , pp. 77-80
    • Hilario, E.1
  • 19
    • 84857040285 scopus 로고    scopus 로고
    • Malaria parasites (Plamodium spp.) infecting introduced, native and endemic New Zealand birds
    • PID: 21842389
    • Howe L, Castro IC, Schoener ER, Hunter S, Barraclough RK, Alley MR (2012) Malaria parasites (Plamodium spp.) infecting introduced, native and endemic New Zealand birds. Parasitol Res 110:913–23. doi:10.1007/s00436-011-2577-z
    • (2012) Parasitol Res , vol.110 , pp. 913-923
    • Howe, L.1    Castro, I.C.2    Schoener, E.R.3    Hunter, S.4    Barraclough, R.K.5    Alley, M.R.6
  • 20
    • 0025810836 scopus 로고
    • Inhibitory effects of urine on the polymerase chain reaction for cytomegalovirus DNA
    • COI: 1:STN:280:DyaK3M3lvVGluw%3D%3D, PID: 1646235
    • Khan G, Kangro HO, Coates PJ, Heath RB (1991) Inhibitory effects of urine on the polymerase chain reaction for cytomegalovirus DNA. J Clin Pathol 44:360–365. doi:10.1136/jcp.44.5.360
    • (1991) J Clin Pathol , vol.44 , pp. 360-365
    • Khan, G.1    Kangro, H.O.2    Coates, P.J.3    Heath, R.B.4
  • 21
    • 0030048084 scopus 로고    scopus 로고
    • Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein
    • COI: 1:CAS:528:DyaK28XhsVWqt7s%3D, PID: 8975603
    • Kreader CA (1996) Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein. Appl Environ Microbiol 62:1102–1106
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1102-1106
    • Kreader, C.A.1
  • 22
    • 84857483317 scopus 로고    scopus 로고
    • Ecology and conservation biology of avian malaria
    • PID: 22320256
    • LaPointe DA, Atkinson CT, Samuel MD (2012) Ecology and conservation biology of avian malaria. Ann N Y Acad Sci 1249:211–26. doi:10.1111/j.1749-6632.2011.06431.x
    • (2012) Ann N Y Acad Sci , vol.1249 , pp. 211-226
    • LaPointe, D.A.1    Atkinson, C.T.2    Samuel, M.D.3
  • 23
    • 34848838630 scopus 로고    scopus 로고
    • PCR detection of Plasmodium and blood meal identification in a native New Zealand mosquito
    • COI: 1:STN:280:DC%2BD2svhsVyrsA%3D%3D, PID: 17633437
    • Massey B, Gleeson D, Slaney D, Tompkins D (2007) PCR detection of Plasmodium and blood meal identification in a native New Zealand mosquito. J Vector Ecol 32:154–156. doi:10.3376/1081-1710(2007)32[154:PDOPAB]2.0.CO;2
    • (2007) J Vector Ecol , vol.32 , pp. 154-156
    • Massey, B.1    Gleeson, D.2    Slaney, D.3    Tompkins, D.4
  • 24
    • 84875244822 scopus 로고    scopus 로고
    • A DNA extraction and purification method using an ion-exchange resin type kit for the detection of genetically modified papaya in processed papaya products
    • COI: 1:CAS:528:DC%2BC3sXksFCisLg%3D
    • Ohmori K, Nakamura K, Kasahara M, Takabatake R, Kitta K, Fujimaki T, Kondo K, Teshima R, Akiyama H (2013) A DNA extraction and purification method using an ion-exchange resin type kit for the detection of genetically modified papaya in processed papaya products. Food Control 32:728–735. doi:10.1016/j.foodcont.2013.01.013
    • (2013) Food Control , vol.32 , pp. 728-735
    • Ohmori, K.1    Nakamura, K.2    Kasahara, M.3    Takabatake, R.4    Kitta, K.5    Fujimaki, T.6    Kondo, K.7    Teshima, R.8    Akiyama, H.9
  • 25
    • 77953552210 scopus 로고    scopus 로고
    • Laser microdissection microscopy and single cell PCR of avian hemosporidians
    • COI: 1:CAS:528:DC%2BC3cXptVWqurs%3D, PID: 20001098
    • Palinauskas V, Dolnik OV, Valkiūnas G, Bensch S (2010) Laser microdissection microscopy and single cell PCR of avian hemosporidians. J Parasitol 96:420–424. doi:10.1645/GE-2247.1
    • (2010) J Parasitol , vol.96 , pp. 420-424
    • Palinauskas, V.1    Dolnik, O.V.2    Valkiūnas, G.3    Bensch, S.4
  • 26
    • 84857331361 scopus 로고    scopus 로고
    • A sample extraction method for faster, more sensitive PCR-based detection of pathogens in blood culture
    • COI: 1:CAS:528:DC%2BC38Xms1Srtbk%3D
    • Regan JF, Furtado MR, Brevnov MG, Jordan JA (2012) A sample extraction method for faster, more sensitive PCR-based detection of pathogens in blood culture. J Mol Diagnostics 14:120–129. doi:10.1016/j.jmoldx.2011.10.001
    • (2012) J Mol Diagnostics , vol.14 , pp. 120-129
    • Regan, J.F.1    Furtado, M.R.2    Brevnov, M.G.3    Jordan, J.A.4
  • 27
    • 0037035378 scopus 로고    scopus 로고
    • Diversification and host switching in avian malaria parasites
    • PID: 12028770
    • Ricklefs RE, Fallon SM (2002) Diversification and host switching in avian malaria parasites. Proc Biol Sci 269:885–92. doi:10.1098/rspb.2001.1940
    • (2002) Proc Biol Sci , vol.269 , pp. 885-892
    • Ricklefs, R.E.1    Fallon, S.M.2
  • 30
    • 33746518602 scopus 로고    scopus 로고
    • Relationship between avian malaria distribution and an exotic invasive mosquito in New Zealand
    • Tompkins DM, Gleeson DM (2006) Relationship between avian malaria distribution and an exotic invasive mosquito in New Zealand. J R Soc New Zeal 36:51–62. doi:10.1080/03014223.2006.9517799
    • (2006) J R Soc New Zeal , vol.36 , pp. 51-62
    • Tompkins, D.M.1    Gleeson, D.M.2
  • 31
    • 0026708461 scopus 로고
    • Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction
    • COI: 1:CAS:528:DyaK38XltVGhtbg%3D, PID: 1386212
    • Tsai Y, Olson BH (1992) Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction. Appl Environ Microbiol 58:2292–2295
    • (1992) Appl Environ Microbiol , vol.58 , pp. 2292-2295
    • Tsai, Y.1    Olson, B.H.2
  • 32
    • 0344237217 scopus 로고    scopus 로고
    • Geographic and habitat partitioning of genetically distinct zooxanthellae (Symbiodinium) in Acropora corals on the Great Barrier Reef
    • COI: 1:CAS:528:DC%2BD2cXks12jtg%3D%3D, PID: 14629362
    • Ulstrup KE, Van Oppen MJH (2003) Geographic and habitat partitioning of genetically distinct zooxanthellae (Symbiodinium) in Acropora corals on the Great Barrier Reef. Mol Ecol 12:3477–3484. doi:10.1046/j.1365-294X.2003.01988.x
    • (2003) Mol Ecol , vol.12 , pp. 3477-3484
    • Ulstrup, K.E.1    Van Oppen, M.J.H.2
  • 33
    • 33947359115 scopus 로고    scopus 로고
    • Linkage between mitochondrial cytochrome b lineages and morphospecies of two avian malaria parasites, with a description of Plasmodium (Novyella) ashfordi sp. nov
    • PID: 17235548
    • Valkiunas G, Zehtindjiev P, Hellgren O, Ilieva M, Iezhova TA, Bensch S (2007) Linkage between mitochondrial cytochrome b lineages and morphospecies of two avian malaria parasites, with a description of Plasmodium (Novyella) ashfordi sp. nov. Parasitol Res 100:1311–22. doi:10.1007/s00436-006-0409-3
    • (2007) Parasitol Res , vol.100 , pp. 1311-1322
    • Valkiunas, G.1    Zehtindjiev, P.2    Hellgren, O.3    Ilieva, M.4    Iezhova, T.A.5    Bensch, S.6
  • 34
    • 0001761994 scopus 로고
    • The epizootiology and ecological significance of malaria in Hawaiian land birds
    • van Riper C, van Riper SG, Goff ML, Laird M (1986) The epizootiology and ecological significance of malaria in Hawaiian land birds. Ecol Monogr 56:327–344. doi:10.2307/1942550
    • (1986) Ecol Monogr , vol.56 , pp. 327-344
    • van Riper, C.1    van Riper, S.G.2    Goff, M.L.3    Laird, M.4
  • 35
    • 76149100250 scopus 로고    scopus 로고
    • A theoretical study of the separation principle in size exclusion chromatography
    • COI: 1:CAS:528:DC%2BC3cXivFKlsg%3D%3D
    • Wang Y, Teraoka I, Hansen FY, Peters GH, Hassager O (2010) A theoretical study of the separation principle in size exclusion chromatography. Macromolecules 43:1651–1659. doi:10.1021/ma902377g
    • (2010) Macromolecules , vol.43 , pp. 1651-1659
    • Wang, Y.1    Teraoka, I.2    Hansen, F.Y.3    Peters, G.H.4    Hassager, O.5
  • 36
    • 0030748867 scopus 로고    scopus 로고
    • Inhibition and facilitation of nucleic acid amplification
    • COI: 1:CAS:528:DyaK2sXms1Sgsrg%3D, PID: 9327537
    • Wilson IG (1997) Inhibition and facilitation of nucleic acid amplification. Appl Environ Microbiol 63:3741–3751
    • (1997) Appl Environ Microbiol , vol.63 , pp. 3741-3751
    • Wilson, I.G.1
  • 37
    • 34447651190 scopus 로고    scopus 로고
    • Within-population variation in prevalence and lineage distribution of avian malaria in blue tits, Cyanistes caeruleus
    • COI: 1:CAS:528:DC%2BD2sXhtVert7%2FM, PID: 17651202
    • Wood MJ, Cosgrove CL, Wilkin TA, Knowles SCL, Day KP, Sheldon BC (2007) Within-population variation in prevalence and lineage distribution of avian malaria in blue tits, Cyanistes caeruleus. Mol Ecol 16:3263–73. doi:10.1111/j.1365-294X.2007.03362.x
    • (2007) Mol Ecol , vol.16 , pp. 3263-3273
    • Wood, M.J.1    Cosgrove, C.L.2    Wilkin, T.A.3    Knowles, S.C.L.4    Day, K.P.5    Sheldon, B.C.6
  • 39
    • 0031007215 scopus 로고    scopus 로고
    • Removal of PCR inhibitors using silica-based spin columns: application to ancient bones
    • COI: 1:CAS:528:DyaK2sXjtFegu7c%3D
    • Yang DY, Eng B, Dudar JC, Saunders SR, Waye JS (1997) Removal of PCR inhibitors using silica-based spin columns: application to ancient bones. J Can Soc Forensic Sci 30:1–5. doi:10.1080/00085030.1997.10757080
    • (1997) J Can Soc Forensic Sci , vol.30 , pp. 1-5
    • Yang, D.Y.1    Eng, B.2    Dudar, J.C.3    Saunders, S.R.4    Waye, J.S.5
  • 40
    • 3142746095 scopus 로고    scopus 로고
    • A simple and efficient method for extracting DNA from old and burned bone
    • COI: 1:CAS:528:DC%2BD2cXmsVyqt7c%3D, PID: 15317190
    • Ye J, Ji A, Parra EJ, Zheng X, Jiang C, Zhao X, Hu L, Tu Z (2004) A simple and efficient method for extracting DNA from old and burned bone. J Forensic Sci 49:754–759. doi:10.1520/JFS2003275
    • (2004) J Forensic Sci , vol.49 , pp. 754-759
    • Ye, J.1    Ji, A.2    Parra, E.J.3    Zheng, X.4    Jiang, C.5    Zhao, X.6    Hu, L.7    Tu, Z.8


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