-
1
-
-
0035461237
-
Bacteriophage latent-period evolution as a response to resource availability
-
Abedon ST, Herschler TD, Stopar D. (2001). Bacteriophage latent-period evolution as a response to resource availability. Appl Environ Microbiol 67: 4233-4241.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4233-4241
-
-
Abedon, S.T.1
Herschler, T.D.2
Stopar, D.3
-
2
-
-
2142693752
-
Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability
-
Abedon ST, Hyman P, Thomas C. (2003). Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability. Appl Environ Microbiol 69: 7499-7506.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 7499-7506
-
-
Abedon, S.T.1
Hyman, P.2
Thomas, C.3
-
3
-
-
84880989017
-
Lytic infection of Lactococcus lactis by bacterio-phages Tuc2009 and c2 triggers alternative transcrip-tional host responses
-
Ainsworth S, Zomer A, Mahony J, Van Sinderen D. (2013). Lytic infection of Lactococcus lactis by bacterio-phages Tuc2009 and c2 triggers alternative transcrip-tional host responses. Appl Environ Microbiol 79: 4786-4798.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 4786-4798
-
-
Ainsworth, S.1
Zomer, A.2
Mahony, J.3
Van Sinderen, D.4
-
4
-
-
56149118576
-
Modeling the fitness consequences of a cyanophage-encoded photosynthesis gene
-
Bragg JG, Chisholm SW. (2008). Modeling the fitness consequences of a cyanophage-encoded photosynthesis gene. PLoS One 3: e3550.
-
(2008)
PLoS One
, vol.3
, pp. e3550
-
-
Bragg, J.G.1
Chisholm, S.W.2
-
5
-
-
0025095305
-
Phage shock protein, a stress protein of Escherichia coli
-
Brissette JL, Russel M, Weiner L, Model P. (1990). Phage shock protein, a stress protein of Escherichia coli. Proc Natl Acad Sci USA 87: 862-866.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 862-866
-
-
Brissette, J.L.1
Russel, M.2
Weiner, L.3
Model, P.4
-
6
-
-
84908268638
-
Attenuation of virus production at high multiplicities of infection in Aureococcus anophagefferens
-
Brown CM, Bidle KD. (2014). Attenuation of virus production at high multiplicities of infection in Aureococcus anophagefferens. Virology 466-467: 71-81.
-
(2014)
Virology
, vol.466-467
, pp. 71-81
-
-
Brown, C.M.1
Bidle, K.D.2
-
7
-
-
31544474586
-
Spatial and temporal variability of prokaryotes, viruses, and viral infections of prokaryotes in an alkaline, hypersaline lake
-
Brum JR, Steward GF, Jiang SC, Jellison R. (2005). Spatial and temporal variability of prokaryotes, viruses, and viral infections of prokaryotes in an alkaline, hypersaline lake. Aquatic Microbial Ecol 41: 247-260.
-
(2005)
Aquatic Microbial Ecol
, vol.41
, pp. 247-260
-
-
Brum, J.R.1
Steward, G.F.2
Jiang, S.C.3
Jellison, R.4
-
8
-
-
84906350544
-
Development of giant bacteriophage varphiKZ is independent of the host transcription apparatus
-
Ceyssens PJ, Minakhin L, Van Den Bossche A, Yakunina M, Klimuk E, Blasdel B et al. (2014). Development of giant bacteriophage varphiKZ is independent of the host transcription apparatus. J Virol 88: 10501-10510.
-
(2014)
J Virol
, vol.88
, pp. 10501-10510
-
-
Ceyssens, P.J.1
Minakhin, L.2
Van Den Bossche, A.3
Yakunina, M.4
Klimuk, E.5
Blasdel, B.6
-
9
-
-
0033954075
-
Insights into transcription: Structure and function of single-subunit DNA-dependent RNA polymerases
-
Cheetham GM, Steitz TA. (2000). Insights into transcription: structure and function of single-subunit DNA-dependent RNA polymerases. Curr Opin Struct Biol 10: 117-123.
-
(2000)
Curr Opin Struct Biol
, vol.10
, pp. 117-123
-
-
Cheetham, G.M.1
Steitz, T.A.2
-
10
-
-
0035902587
-
Historical overview: Searching for replication help in all of the rec places
-
Cox MM. (2001). Historical overview: searching for replication help in all of the rec places. Proc Natl Acad Sci USA 98: 8173-8180.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8173-8180
-
-
Cox, M.M.1
-
11
-
-
84949318191
-
Variably lytic infection dynamics of large Bacteroidetes podovirus phi38:1 against two Cellulo-phaga baltica host strains
-
Dang VT, Howard-Varona C, Schwenck S, Sullivan MB. (2015). Variably lytic infection dynamics of large Bacteroidetes podovirus phi38:1 against two Cellulo-phaga baltica host strains. Environ Microbiol 17: 4659-4671.
-
(2015)
Environ Microbiol
, vol.17
, pp. 4659-4671
-
-
Dang, V.T.1
Howard-Varona, C.2
Schwenck, S.3
Sullivan, M.B.4
-
12
-
-
84920694495
-
Emerging methods to study bacteriophage infection at the single-cell level
-
Dang VT, Sullivan MB. (2014). Emerging methods to study bacteriophage infection at the single-cell level. Front Microbiol 5: 724.
-
(2014)
Front Microbiol
, vol.5
, pp. 724
-
-
Dang, V.T.1
Sullivan, M.B.2
-
13
-
-
84949604565
-
Transcriptome dynamics of a broad host-range cyanophage and its hosts
-
e-pub ahead of print 1 December 2015
-
Doron S, Fedida A, Hernandez-Prieto MA, Sabehi G, Karunker I, Stazic D et al. (2015). Transcriptome dynamics of a broad host-range cyanophage and its hosts. ISME J; e-pub ahead of print 1 December 2015; doi:10.1038/ismej.2015.210.
-
(2015)
ISME J
-
-
Doron, S.1
Fedida, A.2
Hernandez-Prieto, M.A.3
Sabehi, G.4
Karunker, I.5
Stazic, D.6
-
14
-
-
84870665503
-
Ocean viruses: Rigorously evaluating the metagenomic sample-to-sequence pipeline
-
Duhaime MB, Sullivan MB. (2012). Ocean viruses: Rigorously evaluating the metagenomic sample-to-sequence pipeline. Virology 434: 181-186.
-
(2012)
Virology
, vol.434
, pp. 181-186
-
-
Duhaime, M.B.1
Sullivan, M.B.2
-
15
-
-
44449137093
-
The microbial engines that drive Earth's biogeochemical cycles
-
Falkowski PG, Fenchel T, Delong EF. (2008). The microbial engines that drive Earth's biogeochemical cycles. Science 320: 1034-1039.
-
(2008)
Science
, vol.320
, pp. 1034-1039
-
-
Falkowski, P.G.1
Fenchel, T.2
Delong, E.F.3
-
16
-
-
80655125480
-
Genetic response to bacteriophage infection in Lac-tococcus lactis reveals a four-strand approach involving induction of membrane stress proteins, D-alanylation of the cell wall, maintenance of proton motive force, and energy conservation
-
Fallico V, Ross RP, Fitzgerald GF, Mcauliffe O. (2011). Genetic response to bacteriophage infection in Lac-tococcus lactis reveals a four-strand approach involving induction of membrane stress proteins, D-alanylation of the cell wall, maintenance of proton motive force, and energy conservation. J Virol 85: 12032-12042.
-
(2011)
J Virol
, vol.85
, pp. 12032-12042
-
-
Fallico, V.1
Ross, R.P.2
Fitzgerald, G.F.3
McAuliffe, O.4
-
17
-
-
0033542481
-
Marine viruses and their biogeochem-ical and ecological effects
-
Fuhrman JA. (1999). Marine viruses and their biogeochem-ical and ecological effects. Nature 399: 541-548.
-
(1999)
Nature
, vol.399
, pp. 541-548
-
-
Fuhrman, J.A.1
-
18
-
-
84921283583
-
BREX is a novel phage resistance system widespread in microbial genomes
-
Goldfarb T, Sberro H, Weinstock E, Cohen O, Doron S, Charpak-Amikam Y et al. (2015). BREX is a novel phage resistance system widespread in microbial genomes. EMBO J 34: 169-183.
-
(2015)
EMBO J
, vol.34
, pp. 169-183
-
-
Goldfarb, T.1
Sberro, H.2
Weinstock, E.3
Cohen, O.4
Doron, S.5
Charpak-Amikam, Y.6
-
19
-
-
77950042744
-
Distinct flavo-bacterial communities in contrasting water masses of the north Atlantic Ocean
-
Gomez-Pereira PR, Fuchs BM, Alonso C, Oliver MJ, Van Beusekom JE, Amann R. (2010). Distinct flavo-bacterial communities in contrasting water masses of the north Atlantic Ocean. ISME J 4: 472-487.
-
(2010)
ISME J
, vol.4
, pp. 472-487
-
-
Gomez-Pereira, P.R.1
Fuchs, B.M.2
Alonso, C.3
Oliver, M.J.4
Van Beusekom, J.E.5
Amann, R.6
-
20
-
-
84893438578
-
You are what you host: Microbiome modulation of the aging process
-
Heintz C, Mair W. (2014). You are what you host: microbiome modulation of the aging process. Cell 156: 408-411.
-
(2014)
Cell
, vol.156
, pp. 408-411
-
-
Heintz, C.1
Mair, W.2
-
21
-
-
84905390572
-
Contrasting genomic patterns and infection strategies of two co-existing Bacteroidetes podovirus genera
-
Holmfeldt K, Howard-Varona C, Solonenko N, Sullivan MB. (2014). Contrasting genomic patterns and infection strategies of two co-existing Bacteroidetes podovirus genera. Environ Microbiol 16: 2501-2513.
-
(2014)
Environ Microbiol
, vol.16
, pp. 2501-2513
-
-
Holmfeldt, K.1
Howard-Varona, C.2
Solonenko, N.3
Sullivan, M.B.4
-
22
-
-
35948993040
-
Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts
-
Holmfeldt K, Middelboe M, Nybroe O, Riemann L. (2007). Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts. Appl Environ Microbiol 73: 6730-6739.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 6730-6739
-
-
Holmfeldt, K.1
Middelboe, M.2
Nybroe, O.3
Riemann, L.4
-
23
-
-
84881090889
-
Twelve previously unknown phage genera are ubiquitous in global oceans
-
Holmfeldt K, Solonenko N, Shah M, Corrier K, Riemann L, Verberkmoes NC et al. (2013). Twelve previously unknown phage genera are ubiquitous in global oceans. Proc Natl Acad Sci USA 110: 12798-12803.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 12798-12803
-
-
Holmfeldt, K.1
Solonenko, N.2
Shah, M.3
Corrier, K.4
Riemann, L.5
Verberkmoes, N.C.6
-
24
-
-
84887380143
-
Metabolic reprogramming by viruses in the sunlit and dark ocean
-
Hurwitz BL, Hallam SJ, Sullivan MB. (2013). Metabolic reprogramming by viruses in the sunlit and dark ocean. Genome Biol 14: R123.
-
(2013)
Genome Biol
, vol.14
, pp. R123
-
-
Hurwitz, B.L.1
Hallam, S.J.2
Sullivan, M.B.3
-
25
-
-
84877310465
-
Smaller fleas: Viruses of microorganisms
-
Hyman P, Abedon ST. (2012). Smaller fleas: viruses of microorganisms. Scientifica (Cairo) 2012: 734023.
-
(2012)
Scientifica (Cairo)
, vol.2012
, pp. 734023
-
-
Hyman, P.1
Abedon, S.T.2
-
27
-
-
0036207009
-
The ecology of Cytophaga-Flavobacteria in aquatic environments
-
Kirchman DL. (2002). The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39: 91-100.
-
(2002)
FEMS Microbiol Ecol
, vol.39
, pp. 91-100
-
-
Kirchman, D.L.1
-
28
-
-
0018357470
-
Shutoff of host macro-molecular synthesis after T-even bacteriophage infection
-
Koerner JF, Snustad DP. (1979). Shutoff of host macro-molecular synthesis after T-even bacteriophage infection. Microbiol Rev 43: 199-223.
-
(1979)
Microbiol Rev
, vol.43
, pp. 199-223
-
-
Koerner, J.F.1
Snustad, D.P.2
-
29
-
-
84880068940
-
A multifaceted study of Pseudomonas aeruginosa shutdown by virulent podovirus LUZ19
-
Lavigne R, Lecoutere E, Wagemans J, Cenens W, Aertsen A, Schoofs L et al. (2013). A multifaceted study of Pseudomonas aeruginosa shutdown by virulent podovirus LUZ19. MBio 4: e00061-13.
-
(2013)
MBio
, vol.4
, pp. e00061-e00113
-
-
Lavigne, R.1
Lecoutere, E.2
Wagemans, J.3
Cenens, W.4
Aertsen, A.5
Schoofs, L.6
-
30
-
-
77951857386
-
MRNA deep sequencing reveals 75 new genes and a complex transcriptional landscape in Mimivirus
-
Legendre M, Audic S, Poirot O, Hingamp P, Seltzer V, Byrne D et al. (2010). mRNA deep sequencing reveals 75 new genes and a complex transcriptional landscape in Mimivirus. Genome Res 20: 664-674.
-
(2010)
Genome Res
, vol.20
, pp. 664-674
-
-
Legendre, M.1
Audic, S.2
Poirot, O.3
Hingamp, P.4
Seltzer, V.5
Byrne, D.6
-
31
-
-
85006425863
-
Transcriptomic response during phage infection of a marine cyanobacterium under phosphorus-limited conditions
-
Lin X, Ding H, Zeng Q. (2015). Transcriptomic response during phage infection of a marine cyanobacterium under phosphorus-limited conditions. Environ Microbiol.
-
(2015)
Environ Microbiol
-
-
Lin, X.1
Ding, H.2
Zeng, Q.3
-
32
-
-
34548513271
-
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution
-
Lindell D, Jaffe JD, Coleman ML, Futschik ME, Axmann IM, Rector T et al. (2007). Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature 449: 83-86.
-
(2007)
Nature
, vol.449
, pp. 83-86
-
-
Lindell, D.1
Jaffe, J.D.2
Coleman, M.L.3
Futschik, M.E.4
Axmann, I.M.5
Rector, T.6
-
33
-
-
6044247519
-
Genome of bacteriophage P1
-
Lobocka MB, Rose DJ, Plunkett G III, Rusin M, Samojedny A, Lehnherr H et al. (2004). Genome of bacteriophage P1. J Bacteriol 186: 7032-7068.
-
(2004)
J Bacteriol
, vol.186
, pp. 7032-7068
-
-
Lobocka, M.B.1
Rose, D.J.2
Plunkett, G.3
Rusin, M.4
Samojedny, A.5
Lehnherr, H.6
-
34
-
-
0015542146
-
Gene expression during the development of Bacillus subtilis bacterioph-age phi 29. I. Analysis of viral-specific transcription by deoxyribonucleic acid-ribonucleic acid competition hybridization
-
Loskutoff DJ, Pene JJ, Andrews DP. (1973). Gene expression during the development of Bacillus subtilis bacterioph-age phi 29. I. Analysis of viral-specific transcription by deoxyribonucleic acid-ribonucleic acid competition hybridization. J Virol 11: 78-86.
-
(1973)
J Virol
, vol.11
, pp. 78-86
-
-
Loskutoff, D.J.1
Pene, J.J.2
Andrews, D.P.3
-
35
-
-
84937459775
-
Engineered biosynthesis of natural products in heterologous hosts
-
Luo Y, Li B-Z, Liu D, Zhang L, Chen Y, Jia B et al. (2015). Engineered biosynthesis of natural products in heterologous hosts. Chem Soc Rev 44: 5265-5290.
-
(2015)
Chem Soc Rev
, vol.44
, pp. 5265-5290
-
-
Luo, Y.1
Li, B.-Z.2
Liu, D.3
Zhang, L.4
Chen, Y.5
Jia, B.6
-
36
-
-
17644410730
-
The genome of S-PM2, a 'photosynthetic' T4-type bacteriophage that infects marine Synechococcus strains
-
Mann NH, Clokie MR, Millard A, Cook A, Wilson WH, Wheatley PJ et al. (2005). The genome of S-PM2, a 'photosynthetic' T4-type bacteriophage that infects marine Synechococcus strains. J Bacteriol 187: 3188-3200.
-
(2005)
J Bacteriol
, vol.187
, pp. 3188-3200
-
-
Mann, N.H.1
Clokie, M.R.2
Millard, A.3
Cook, A.4
Wilson, W.H.5
Wheatley, P.J.6
-
37
-
-
53549118607
-
The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer F, Paarmann D, D'souza M, Olson R, Glass EM, Kubal M et al. (2008). The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinform 9: 386.
-
(2008)
BMC Bioinform
, vol.9
, pp. 386
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
-
38
-
-
0037335488
-
Bacteriophage T4 genome
-
table of contents
-
Miller ES, Kutter E, Mosig G, Arisaka F, Kunisawa T, Ruger W. (2003). Bacteriophage T4 genome. Microbiol Mol Biol Rev 67: 86-156; table of contents.
-
(2003)
Microbiol Mol Biol Rev
, vol.67
, pp. 86-156
-
-
Miller, E.S.1
Kutter, E.2
Mosig, G.3
Arisaka, F.4
Kunisawa, T.5
Ruger, W.6
-
39
-
-
84906809090
-
Factors affecting virus dynamics and microbial host-virus interactions in marine environments
-
Mojica KD, Brussaard CP. (2014). Factors affecting virus dynamics and microbial host-virus interactions in marine environments. FEMS Microbiol Ecol 89: 495-515.
-
(2014)
FEMS Microbiol Ecol
, vol.89
, pp. 495-515
-
-
Mojica, K.D.1
Brussaard, C.P.2
-
40
-
-
46249106990
-
Mapping and quantifying mammalian tran-scriptomes by RNA-Seq
-
Mortazavi A, Williams BA, Mccue K, Schaeffer L, Wold B. (2008). Mapping and quantifying mammalian tran-scriptomes by RNA-Seq. Nat Methods 5: 621-628.
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
41
-
-
0017817821
-
Regulation of transcription of the late genes of bacteriophage T7
-
Omcallister WT, Wu HL. (1978). Regulation of transcription of the late genes of bacteriophage T7. Proc Natl Acad Sci USA 75: 804-808.
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, pp. 804-808
-
-
Omcallister, W.T.1
Wu, H.L.2
-
42
-
-
84856690450
-
Temporal regulation of gene expression of the Escherichia coli bacteriophage phiEco32
-
Pavlova O, Lavysh D, Klimuk E, Djordjevic M, Ravcheev DA, Gelfand MS et al. (2012). Temporal regulation of gene expression of the Escherichia coli bacteriophage phiEco32. J Mol Biol 416: 389-399.
-
(2012)
J Mol Biol
, vol.416
, pp. 389-399
-
-
Pavlova, O.1
Lavysh, D.2
Klimuk, E.3
Djordjevic, M.4
Ravcheev, D.A.5
Gelfand, M.S.6
-
43
-
-
0015694413
-
Synthesis of bacteriophage phi 29 proteins in Bacillus subtilis
-
Pene JJ, Murr PC, Barrow-Carraway J. (1973). Synthesis of bacteriophage phi 29 proteins in Bacillus subtilis. J Virol 12: 61-67.
-
(1973)
J Virol
, vol.12
, pp. 61-67
-
-
Pene, J.J.1
Murr, P.C.2
Barrow-Carraway, J.3
-
44
-
-
33746835286
-
Global changes in cellular gene expression during bacteriophage PRD1 infection
-
Poranen MM, Ravantti JJ, Grahn AM, Gupta R, Auvinen P, Bamford DH. (2006). Global changes in cellular gene expression during bacteriophage PRD1 infection. J Virol 80: 8081-8088.
-
(2006)
J Virol
, vol.80
, pp. 8081-8088
-
-
Poranen, M.M.1
Ravantti, J.J.2
Grahn, A.M.3
Gupta, R.4
Auvinen, P.5
Bamford, D.H.6
-
45
-
-
0017202486
-
Enzymatic action of coliphage omega8 and its possible role in infection
-
Prehm P, Jann K. (1976). Enzymatic action of coliphage omega8 and its possible role in infection. J Virol 19: 940-949.
-
(1976)
J Virol
, vol.19
, pp. 940-949
-
-
Prehm, P.1
Jann, K.2
-
46
-
-
39749162838
-
Global transcriptional responses of Pseudomo-nas aeruginosa to phage PRR1 infection
-
Ravantti JJ, Ruokoranta TM, Alapuranen AM, Bamford DH. (2008). Global transcriptional responses of Pseudomo-nas aeruginosa to phage PRR1 infection. J Virol 82: 2324-2329.
-
(2008)
J Virol
, vol.82
, pp. 2324-2329
-
-
Ravantti, J.J.1
Ruokoranta, T.M.2
Alapuranen, A.M.3
Bamford, D.H.4
-
47
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A. (2000). EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16: 276-277.
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
48
-
-
84881138595
-
Insights into the phylogeny and coding potential of microbial dark matter
-
Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng JF et al. (2013). Insights into the phylogeny and coding potential of microbial dark matter. Nature 499: 431-437.
-
(2013)
Nature
, vol.499
, pp. 431-437
-
-
Rinke, C.1
Schwientek, P.2
Sczyrba, A.3
Ivanova, N.N.4
Anderson, I.J.5
Cheng, J.F.6
-
49
-
-
75249087100
-
EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, Mccarthy DJ, Smyth GK. (2010). edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26: 139-140.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
50
-
-
84949871172
-
In retrospect: A century of phage lessons
-
Rohwer F, Segall AM. (2015). In retrospect: a century of phage lessons. Nature 528: 46-48.
-
(2015)
Nature
, vol.528
, pp. 46-48
-
-
Rohwer, F.1
Segall, A.M.2
-
52
-
-
85021815678
-
Ecogenomics of uncultivated globally abundant ocean viruses
-
Roux S, Brum J, Dutilh BE, Sunagawa S, Duhaime MB, Loy A et al. (2015a). Ecogenomics of uncultivated globally abundant ocean viruses. Nature (in review). doi:10.1101/053090.
-
(2015)
Nature (In Review)
-
-
Roux, S.1
Brum, J.2
Dutilh, B.E.3
Sunagawa, S.4
Duhaime, M.B.5
Loy, A.6
-
53
-
-
84939526110
-
Viral dark matter and virus-host interactions resolved from publicly available microbial genomes
-
Roux S, Hallam SJ, Woyke T, Sullivan MB. (2015b). Viral dark matter and virus-host interactions resolved from publicly available microbial genomes. Elife 4: e08490.
-
(2015)
Elife
, vol.4
, pp. e08490
-
-
Roux, S.1
Hallam, S.J.2
Woyke, T.3
Sullivan, M.B.4
-
54
-
-
84947491821
-
A century of the phage: Past, present and future
-
Salmond GP, Fineran PC. (2015). A century of the phage: past, present and future. Nat Rev Microbiol 13: 777-786.
-
(2015)
Nat Rev Microbiol
, vol.13
, pp. 777-786
-
-
Salmond, G.P.1
Fineran, P.C.2
-
56
-
-
56049107073
-
Bacteriophage adsorption rate and optimal lysis time
-
Shao Y, Wang IN. (2008). Bacteriophage adsorption rate and optimal lysis time. Genetics 180: 471-482.
-
(2008)
Genetics
, vol.180
, pp. 471-482
-
-
Shao, Y.1
Wang, I.N.2
-
57
-
-
0023650543
-
The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
-
Sharp PM, Li W-H. (1987). The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15: 1281-1295.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.-H.2
-
58
-
-
0642367624
-
Cluster stability scores for microarray data in cancer studies
-
Smolkin M, Ghosh D. (2003). Cluster stability scores for microarray data in cancer studies. BMC Bioinform 4: 36.
-
(2003)
BMC Bioinform
, vol.4
, pp. 36
-
-
Smolkin, M.1
Ghosh, D.2
-
59
-
-
84877278609
-
Sequencing platform and library preparation choices impact viral metagenomes
-
Solonenko SA, Ignacio-Espinoza JC, Alberti A, Cruaud C, Hallam S, Konstantinidis K et al. (2013). Sequencing platform and library preparation choices impact viral metagenomes. BMC Genom 14: 320.
-
(2013)
BMC Genom
, vol.14
, pp. 320
-
-
Solonenko, S.A.1
Ignacio-Espinoza, J.C.2
Alberti, A.3
Cruaud, C.4
Hallam, S.5
Konstantinidis, K.6
-
60
-
-
84868238641
-
Marine microbes see a sea of gradients
-
Stocker R. (2012). Marine microbes see a sea of gradients. Science 338: 628-633.
-
(2012)
Science
, vol.338
, pp. 628-633
-
-
Stocker, R.1
-
61
-
-
84898058300
-
Impact of the cell life-cycle on bacteriophage T4 infection
-
Storms ZJ, Brown T, Cooper DG, Sauvageau D, Leask RL. (2014). Impact of the cell life-cycle on bacteriophage T4 infection. FEMS Microbiol Lett 353: 63-68.
-
(2014)
FEMS Microbiol Lett
, vol.353
, pp. 63-68
-
-
Storms, Z.J.1
Brown, T.2
Cooper, D.G.3
Sauvageau, D.4
Leask, R.L.5
-
62
-
-
33745612095
-
Pvclust: An R package for assessing the uncertainty in hierarchical clustering
-
Suzuki R, Shimodaira H. (2006). Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22: 1540-1542.
-
(2006)
Bioinformatics
, vol.22
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
63
-
-
81255160914
-
Viral subversion of the hostprotein synthesis machinery
-
Walsh D, Mohr I. (2011). Viral subversion of the hostprotein synthesis machinery. Nat Rev Microbiol 9: 860-875.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 860-875
-
-
Walsh, D.1
Mohr, I.2
-
64
-
-
33644778734
-
Lysis timing and bacteriophage fitness
-
Wang IN. (2006). Lysis timing and bacteriophage fitness. Genetics 172: 17-26.
-
(2006)
Genetics
, vol.172
, pp. 17-26
-
-
Wang, I.N.1
-
65
-
-
1942486000
-
Ecology of prokaryotic viruses
-
Weinbauer MG. (2004). Ecology of prokaryotic viruses. FEMS Microbiol Rev 28: 127-181.
-
(2004)
FEMS Microbiol Rev
, vol.28
, pp. 127-181
-
-
Weinbauer, M.G.1
-
66
-
-
84929653204
-
A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes
-
Weitz JS, Stock CA, Wilhelm SW, Bourouiba L, Coleman ML, Buchan A et al. (2015). A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes. ISME J 9: 1352-1364.
-
(2015)
ISME J
, vol.9
, pp. 1352-1364
-
-
Weitz, J.S.1
Stock, C.A.2
Wilhelm, S.W.3
Bourouiba, L.4
Coleman, M.L.5
Buchan, A.6
-
67
-
-
0034053843
-
Virioplankton: Viruses in aquatic ecosystems
-
Wommack KE, Colwell RR. (2000). Virioplankton: Viruses in aquatic ecosystems. Microbiol Mol Biol Rev 64: 69-114.
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 69-114
-
-
Wommack, K.E.1
Colwell, R.R.2
-
68
-
-
0036208888
-
Effects of Escherichia coli physiology on growth of phage T7 in vivo and in silico
-
You L, Suthers PF, Yin J. (2002). Effects of Escherichia coli physiology on growth of phage T7 in vivo and in silico. J Bacteriol 184: 1888-1894.
-
(2002)
J Bacteriol
, vol.184
, pp. 1888-1894
-
-
You, L.1
Suthers, P.F.2
Yin, J.3
-
69
-
-
84931269339
-
Stream microbial diversity in response to environmental changes: Review and synthesis of existing research
-
Zeglin LH. (2015). Stream microbial diversity in response to environmental changes: review and synthesis of existing research. Front Microbiol 6: 454.
-
(2015)
Front Microbiol
, vol.6
, pp. 454
-
-
Zeglin, L.H.1
|