-
1
-
-
0003606653
-
-
CRC Press, Boca Raton, Fla.
-
Ackermann, H. W., and M. S. DuBow. 1987. Viruses of prokaryotes. Bacteriophage taxonomy, p. 13-44. CRC Press, Boca Raton, Fla.
-
(1987)
Viruses of Prokaryotes. Bacteriophage Taxonomy
, pp. 13-44
-
-
Ackermann, H.W.1
DuBow, M.S.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. H. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0035875343
-
GeneMarkS: A self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
-
Besemer, J., A. Lomsadze, and M. Borodovsky. 2001. GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions. Nucleic Acids Res. 29:2607-2618.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2607-2618
-
-
Besemer, J.1
Lomsadze, A.2
Borodovsky, M.3
-
4
-
-
0037044474
-
Analysis of the hli gene family in marine and freshwater cyanobacteria
-
Bhaya, D., A. Dufresne, D. Vaulot, and A. Grossman. 2002. Analysis of the hli gene family in marine and freshwater cyanobacteria. FEMS Microbiol. Lett. 215:209-219.
-
(2002)
FEMS Microbiol. Lett.
, vol.215
, pp. 209-219
-
-
Bhaya, D.1
Dufresne, A.2
Vaulot, D.3
Grossman, A.4
-
5
-
-
0031892162
-
How many membrane proteins are there?
-
Boyd, D., C. Schierle, and J. Beckwith. 1998. How many membrane proteins are there? Protein Sci. 7:201-205.
-
(1998)
Protein Sci.
, vol.7
, pp. 201-205
-
-
Boyd, D.1
Schierle, C.2
Beckwith, J.3
-
6
-
-
0034819993
-
Predicting the beta-helix fold from protein sequence data
-
Montreal, Canada
-
Bradley, P., M. Cowen, J. Menke, J. King, and B. Berger. 2001. Predicting the beta-helix fold from protein sequence data. Presented at the RECOMB 2001, the Fifth Annual International Conference on Computational Molecular Biology, Montreal, Canada.
-
(2001)
RECOMB 2001, the Fifth Annual International Conference on Computational Molecular Biology
-
-
Bradley, P.1
Cowen, M.2
Menke, J.3
King, J.4
Berger, B.5
-
7
-
-
0030515284
-
Viral control of Emiliania huxleyi blooms?
-
Bratbak, G., W. Wilson, and M. Heldal. 1996. Viral control of Emiliania huxleyi blooms? J. Mar. Syst. 9:75-81.
-
(1996)
J. Mar. Syst.
, vol.9
, pp. 75-81
-
-
Bratbak, G.1
Wilson, W.2
Heldal, M.3
-
8
-
-
0000499890
-
Two forms of the photosystem II D1 protein alter energy dissipation and state transitions in the cyanobacterium Synechococcus sp. PCC 7942
-
Campbell, D., D. Bruce, C. Carpenter, P. Gustafsson, and G. Oquist. 1996. Two forms of the photosystem II D1 protein alter energy dissipation and state transitions in the cyanobacterium Synechococcus sp. PCC 7942. Photosynth. Res. 47:131-144.
-
(1996)
Photosynth. Res.
, vol.47
, pp. 131-144
-
-
Campbell, D.1
Bruce, D.2
Carpenter, C.3
Gustafsson, P.4
Oquist, G.5
-
9
-
-
0031940159
-
The cyanobacterium Synechococcus resists UV-B by exchanging photosystem II reaction-center D1 proteins
-
Campbell, D., M. J. Eriksson, G. Oquist, P. Gustafsson, and A. K. Clarke. 1998. The cyanobacterium Synechococcus resists UV-B by exchanging photosystem II reaction-center D1 proteins. Proc. Natl. Acad. Sci. USA 95:364-369.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 364-369
-
-
Campbell, D.1
Eriksson, M.J.2
Oquist, G.3
Gustafsson, P.4
Clarke, A.K.5
-
10
-
-
0036255283
-
Genomic sequence and evolution of marine cyanophage P60: A new insight on lytic and lysogenic phages
-
Chen, F., and J. Lu. 2002. Genomic sequence and evolution of marine cyanophage P60: a new insight on lytic and lysogenic phages. Appl. Environ. Microbiol. 68:2589-2594.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 2589-2594
-
-
Chen, F.1
Lu, J.2
-
11
-
-
0036016816
-
CpeR is an activator required for expression of the phycoerythrin operon (cpeBA) in the cyanobacterium Fremyella diplosiphon and is encoded in the phycoerythrin linker-polypeptide operon (cpeCDESTR)
-
Cobley, J. G., A. C. Clark, S. Weerasurya, F. A. Queseda, J. Y. Xiao, N. Bandrapali, I. D'Silva, M. Thounaojam, J. F. Oda, T. Sumiyoshi, and M. H. Chu. 2002. CpeR is an activator required for expression of the phycoerythrin operon (cpeBA) in the cyanobacterium Fremyella diplosiphon and is encoded in the phycoerythrin linker-polypeptide operon (cpeCDESTR). Mol. Microbiol. 44:1517-1531.
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 1517-1531
-
-
Cobley, J.G.1
Clark, A.C.2
Weerasurya, S.3
Queseda, F.A.4
Xiao, J.Y.5
Bandrapali, N.6
D'Silva, I.7
Thounaojam, M.8
Oda, J.F.9
Sumiyoshi, T.10
Chu, M.H.11
-
12
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G. E., G. Hon, J. M. Chandonia, and S. E. Brenner. 2004. WebLogo: a sequence logo generator. Genome Res. 14:1188-1190.
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
13
-
-
0002954905
-
The transcription apparatus and the regulation of transcription initiation
-
D. A. Bryant (ed.) Kluwer Academic Publishers, Dordrecht, The Netherlands
-
Curtis, S. E., and J. A. Martin. 1994. The transcription apparatus and the regulation of transcription initiation, p. 613-639. In D. A. Bryant (ed.), The molecular biology of cyanobacteria. Kluwer Academic Publishers, Dordrecht, The Netherlands.
-
(1994)
The Molecular Biology of Cyanobacteria
, pp. 613-639
-
-
Curtis, S.E.1
Martin, J.A.2
-
14
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
Delcher, A. L., D. Harmon, S. Kasif, O. White, and S. L. Salzberg. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27:4636-4641.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
15
-
-
0036241904
-
Snapshot of the genome of the pseudo-T-even bacteriophage RB49
-
Desplats, C., C. Dez, F. Tetart, H. Eleaume, and H. M. Krisch. 2002. Snapshot of the genome of the pseudo-T-even bacteriophage RB49. J. Bacteriol. 184:2789-2804.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2789-2804
-
-
Desplats, C.1
Dez, C.2
Tetart, F.3
Eleaume, H.4
Krisch, H.M.5
-
16
-
-
0028843343
-
Cyanobacterial protein with similarity to the chlorophyll a/b-binding proteins of higher plants: Evolution and regulation
-
Dolganov, N. A. M., D. Bhaya, and A. R. Grossman. 1995. Cyanobacterial protein with similarity to the chlorophyll a/b-binding proteins of higher plants: evolution and regulation. Proc. Natl. Acad. Sci. USA 92:636-640.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 636-640
-
-
Dolganov, N.A.M.1
Bhaya, D.2
Grossman, A.R.3
-
17
-
-
0032464347
-
Structural research on surface layers: A focus on stability, surface layer homology domains, and surface layer cell wall interactions
-
Engelhardt, H., and J. Peters. 1998. Structural research on surface layers: a focus on stability, surface layer homology domains, and surface layer cell wall interactions. J. Struct. Biol. 124:276-302.
-
(1998)
J. Struct. Biol.
, vol.124
, pp. 276-302
-
-
Engelhardt, H.1
Peters, J.2
-
18
-
-
0038054297
-
The role played by viruses in the evolution of their hosts: A view based on informational protein phylogenies
-
Filee, J., P. Forterre, and J. Laurent. 2003. The role played by viruses in the evolution of their hosts: a view based on informational protein phylogenies. Res. Microbiol. 154:237-243.
-
(2003)
Res. Microbiol.
, vol.154
, pp. 237-243
-
-
Filee, J.1
Forterre, P.2
Laurent, J.3
-
19
-
-
0033587579
-
A cyanobacterial gene family coding for single-helix proteins resembling part of the light-harvesting proteins from higher plants
-
Funk, C., and W. Vermaas. 1999. A cyanobacterial gene family coding for single-helix proteins resembling part of the light-harvesting proteins from higher plants. Biochemistry 38:9397-9404.
-
(1999)
Biochemistry
, vol.38
, pp. 9397-9404
-
-
Funk, C.1
Vermaas, W.2
-
20
-
-
0042622254
-
PSORT-B: Improving protein subcellular localization prediction for gram-negative bacteria
-
Gardy, J. L., C. Spencer, K. Wang, M. Ester, G. E. Tusnady, I. Simon, S. Hua, K. deFays, C. Lambert, K. Nakai, and F. S. L. Brinkman. 2003. PSORT-B: improving protein subcellular localization prediction for gram-negative bacteria. Nucleic Acids Res. 31:3613-3617.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3613-3617
-
-
Gardy, J.L.1
Spencer, C.2
Wang, K.3
Ester, M.4
Tusnady, G.E.5
Simon, I.6
Hua, S.7
DeFays, K.8
Lambert, C.9
Nakai, K.10
Brinkman, F.S.L.11
-
21
-
-
0027141828
-
The marine prochlorophyte Prochlorococcus contributes significantly to phytoplankton biomass and primary production in the Sargasso Sea
-
Goericke, R., and N. A. Welschmeyer. 1993. The marine prochlorophyte Prochlorococcus contributes significantly to phytoplankton biomass and primary production in the Sargasso Sea. Deep Sea Res. Part I 40:2283-2294.
-
(1993)
Deep Sea Res. Part I
, vol.40
, pp. 2283-2294
-
-
Goericke, R.1
Welschmeyer, N.A.2
-
22
-
-
0000346055
-
Recognition, attachment and injection
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Golberg, E., L. Grinius, and L. Letellier. 1994. Recognition, attachment and injection, p. 347-356. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 347-356
-
-
Golberg, E.1
Grinius, L.2
Letellier, L.3
-
23
-
-
0000544888
-
Light-responsive gene expression and the biochemistry of the photosystem II reaction center
-
D. A. Bryant (ed.) Kluwer, Dordrecht, The Netherlands
-
Golden, S. S. 1994. Light-responsive gene expression and the biochemistry of the photosystem II reaction center, p. 693-714. In D. A. Bryant (ed.), The molecular biology of cyanobacteria. Kluwer, Dordrecht, The Netherlands.
-
(1994)
The Molecular Biology of Cyanobacteria
, pp. 693-714
-
-
Golden, S.S.1
-
24
-
-
0013685329
-
Expression of a family of psbA genes encoding a photosystem-II polypeptide in the cyanobacterium Anacystis nidulans R2
-
Golden, S. S., J. Brusslan, and R. Haselkorn. 1986. Expression of a family of psbA genes encoding a photosystem-II polypeptide in the cyanobacterium Anacystis nidulans R2. EMBO J. 5:2789-2798.
-
(1986)
EMBO J.
, vol.5
, pp. 2789-2798
-
-
Golden, S.S.1
Brusslan, J.2
Haselkorn, R.3
-
25
-
-
0000660061
-
Deoxyribonucleoside triphosphate synthesis and T4 DNA replication
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Greenberg, G. R., P. He, J. Hilfinger, and M.-J. Tseng. 1994. Deoxyribonucleoside triphosphate synthesis and T4 DNA replication, p. 14-25. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 14-25
-
-
Greenberg, G.R.1
He, P.2
Hilfinger, J.3
Tseng, M.-J.4
-
26
-
-
0242692671
-
Multiple sigma subunits and the partitioning of bacterial transcription space
-
Gruber, T. M., and C. A. Gross. 2003. Multiple sigma subunits and the partitioning of bacterial transcription space. Annu. Rev. Microbiol. 57:441-466.
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 441-466
-
-
Gruber, T.M.1
Gross, C.A.2
-
27
-
-
0035949626
-
A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2
-
Hambly, E., F. Tétart, C. Desplats, W. H. Wilson, H. M. Krisch, and N. H. Mann. 2001. A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2. Proc. Natl. Acad. Sci. USA 98:11411-11416.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 11411-11416
-
-
Hambly, E.1
Tétart, F.2
Desplats, C.3
Wilson, W.H.4
Krisch, H.M.5
Mann, N.H.6
-
28
-
-
0035808493
-
The high light-inducible polypeptides in Synechocystis PCC6803. Expression and function in high light
-
He, Q. F., N. Dolganov, O. Bjorkman, and A. R. Grossman. 2001. The high light-inducible polypeptides in Synechocystis PCC6803. Expression and function in high light. J. Biol. Chem. 276:306-314.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 306-314
-
-
He, Q.F.1
Dolganov, N.2
Bjorkman, O.3
Grossman, A.R.4
-
29
-
-
0033514996
-
Evolutionary relationships among diverse bacteriophages and prophages: All the world's a phage
-
Hendrix, R. W., M. C. M. Smith, R. N. Burns, M. E. Ford, and G. F. Hatfull. 1999. Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage. Proc. Natl. Acad. Sci. USA 96:2192-2197.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 2192-2197
-
-
Hendrix, R.W.1
Smith, M.C.M.2
Burns, R.N.3
Ford, M.E.4
Hatfull, G.F.5
-
30
-
-
0031826040
-
SOSUI: Classification and secondary structure prediction system for membrane proteins
-
Hirokawa, T., S. Boon-Chieng, and S. Mitaku. 1998. SOSUI: classification and secondary structure prediction system for membrane proteins. Bioinformatics 14:378-379.
-
(1998)
Bioinformatics
, vol.14
, pp. 378-379
-
-
Hirokawa, T.1
Boon-Chieng, S.2
Mitaku, S.3
-
31
-
-
0041341888
-
Prediction of lipoprotein signal peptides in gram-negative bacteria
-
Juncker, A. S., H. Willenbrock, G. Von Heijne, S. Brunak, H. Nielsen, and A, Krogh. 2003. Prediction of lipoprotein signal peptides in gram-negative bacteria. Protein Sci. 12:1652-1662.
-
(2003)
Protein Sci.
, vol.12
, pp. 1652-1662
-
-
Juncker, A.S.1
Willenbrock, H.2
Von Heijne, G.3
Brunak, S.4
Nielsen, H.5
Krogh, A.6
-
32
-
-
0034749530
-
Identification and inactivation of three group 2 sigma factor genes in Anabaena sp. strain PCC 7120
-
Khudyakov, I. Y., and J. W. Golden. 2001. Identification and inactivation of three group 2 sigma factor genes in Anabaena sp. strain PCC 7120. J. Bacteriol. 183:6667-6675.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6667-6675
-
-
Khudyakov, I.Y.1
Golden, J.W.2
-
33
-
-
0033133996
-
The regulatory role of polyamines in structure and functioning of the photosynthetic apparatus during photoadaptation
-
Kotzabasis, K., B. Strasser, E. Navakoudis, H. Senger, and D. Dornemann. 1999. The regulatory role of polyamines in structure and functioning of the photosynthetic apparatus during photoadaptation. J. Photochem. Photobiol. B 50:45-52.
-
(1999)
J. Photochem. Photobiol. B
, vol.50
, pp. 45-52
-
-
Kotzabasis, K.1
Strasser, B.2
Navakoudis, E.3
Senger, H.4
Dornemann, D.5
-
34
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
-
Krogh, A., B. Larsson, G. von Heijne, and E. L. L. Sonnhammer. 2001. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305:567-580.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
Von Heijne, G.3
Sonnhammer, E.L.L.4
-
35
-
-
0028982444
-
Composition of ultraphytoplankton in the central north-Atlantic
-
Li, W. K. W. 1995. Composition of ultraphytoplankton in the central north-Atlantic. Mar. Ecol. Prog. Ser. 122:1-8.
-
(1995)
Mar. Ecol. Prog. Ser.
, vol.122
, pp. 1-8
-
-
Li, W.K.W.1
-
36
-
-
3342915398
-
Transfer of photosynthesis genes to and from Prochlorococcus viruses
-
Lindell, D., M. B. Sullivan, Z. I. Johnson, A. C. Tolonen, F. Rohwer, and S. W. Chisholm. 2004. Transfer of photosynthesis genes to and from Prochlorococcus viruses. Proc. Natl. Acad. Sci. USA 101:11013-11018.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 11013-11018
-
-
Lindell, D.1
Sullivan, M.B.2
Johnson, Z.I.3
Tolonen, A.C.4
Rohwer, F.5
Chisholm, S.W.6
-
37
-
-
0002326959
-
Prochlorococcus growth rate and contribution to primary production in the equatorial and subtropical North Pacific Ocean
-
Liu, H. B., H. A. Nolla, and L. Campbell. 1997. Prochlorococcus growth rate and contribution to primary production in the equatorial and subtropical North Pacific Ocean. Aquat. Microb. Ecol. 12:39-47.
-
(1997)
Aquat. Microb. Ecol.
, vol.12
, pp. 39-47
-
-
Liu, H.B.1
Nolla, H.A.2
Campbell, L.3
-
38
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Research. 25:955-964.
-
(1997)
Nucleic Acids Research.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
39
-
-
0036435633
-
Microarray analysis of gene expression during bacteriophage T4 infection
-
Luke, K., A. Radek, X. P. Liu, J. Campbell, M. Uzan, R. Haselkorn, and Y. Kogan. 2002. Microarray analysis of gene expression during bacteriophage T4 infection. Virology 299:182-191.
-
(2002)
Virology
, vol.299
, pp. 182-191
-
-
Luke, K.1
Radek, A.2
Liu, X.P.3
Campbell, J.4
Uzan, M.5
Haselkorn, R.6
Kogan, Y.7
-
40
-
-
0037385295
-
Phages of the marine cyanobacterial picophytoplankton
-
Mann, N. H. 2003. Phages of the marine cyanobacterial picophytoplankton. FEMS Microbiol. Rev. 27:17-34.
-
(2003)
FEMS Microbiol. Rev.
, vol.27
, pp. 17-34
-
-
Mann, N.H.1
-
41
-
-
0041736065
-
Marine ecosystems: Bacterial photosynthesis genes in a virus
-
Mann, N. H., A. Cook, A. Millard, S. Bailey, and M. Clokie. 2003. Marine ecosystems: bacterial photosynthesis genes in a virus. Nature 424:741.
-
(2003)
Nature
, vol.424
, pp. 741
-
-
Mann, N.H.1
Cook, A.2
Millard, A.3
Bailey, S.4
Clokie, M.5
-
42
-
-
0034283014
-
Bacterial SLH domain proteins are non-covalently anchored to the cell surface via a conserved mechanism involving wall polysaccharide pyruvylation
-
Mesnage, S., T. Fontaine, T. Mignot, M. Delepierre, M. Mock, and A. Fouet. 2000. Bacterial SLH domain proteins are non-covalently anchored to the cell surface via a conserved mechanism involving wall polysaccharide pyruvylation. EMBO J. 19:4473-4484.
-
(2000)
EMBO J.
, vol.19
, pp. 4473-4484
-
-
Mesnage, S.1
Fontaine, T.2
Mignot, T.3
Delepierre, M.4
Mock, M.5
Fouet, A.6
-
43
-
-
3342929288
-
Genetic organization of the psbAD region in phages infecting marine Synechococcus strains
-
Millard, A., M. R. Clokie, D. A. Shub, and N. H. Mann. 2004. Genetic organization of the psbAD region in phages infecting marine Synechococcus strains. Proc. Natl. Acad. Sci. USA 101:11007-11012.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 11007-11012
-
-
Millard, A.1
Clokie, M.R.2
Shub, D.A.3
Mann, N.H.4
-
44
-
-
0001233551
-
Control of translation initiation: mRNA structure and protein repressors
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Miller, E. S. 1994. Control of translation initiation: mRNA structure and protein repressors, p. 193-205. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 193-205
-
-
Miller, E.S.1
-
45
-
-
0041386480
-
Complete genome sequence of the broad-host-range vibriophage KVP40: Comparative genomics of a T4-related bacteriophage
-
Miller, E. S., J. F. Heidelberg, J. A. Eisen, W. C. Nelson, A. S. Durkin, A. Ciecko, T. V. Feldblyum, O. White, I. T. Paulsen, W. C. Nierman, J. Lee, B. Szczypinski, and C. M. Fraser. 2003. Complete genome sequence of the broad-host-range vibriophage KVP40: comparative genomics of a T4-related bacteriophage. J. Bacteriol. 185:5220-5233.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 5220-5233
-
-
Miller, E.S.1
Heidelberg, J.F.2
Eisen, J.A.3
Nelson, W.C.4
Durkin, A.S.5
Ciecko, A.6
Feldblyum, T.V.7
White, O.8
Paulsen, I.T.9
Nierman, W.C.10
Lee, J.11
Szczypinski, B.12
Fraser, C.M.13
-
46
-
-
0037335488
-
Bacteriophage T4 genome
-
Miller, E. S., E. Kutter, G. Mosig, F. Arisaka, T. Kunisawa, and W. Ruger. 2003. Bacteriophage T4 genome. Microbiol. Mol. Biol. Rev. 67:86-156.
-
(2003)
Microbiol. Mol. Biol. Rev.
, vol.67
, pp. 86-156
-
-
Miller, E.S.1
Kutter, E.2
Mosig, G.3
Arisaka, F.4
Kunisawa, T.5
Ruger, W.6
-
47
-
-
0031588902
-
The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4
-
Monod, C., F. Repoila, M. Kutateladze, F. Tetart, and H. M. Krisch. 1997. The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4. J. Mol. Biol. 267:237-249.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 237-249
-
-
Monod, C.1
Repoila, F.2
Kutateladze, M.3
Tetart, F.4
Krisch, H.M.5
-
48
-
-
0003015508
-
Synthesis and maturation of T4-encoded tRNAs
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Mosig, G. 1994. Synthesis and maturation of T4-encoded tRNAs, p. 182-185. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 182-185
-
-
Mosig, G.1
-
49
-
-
0000498089
-
Gene expression: A paradigm of integrated circuits
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Mosig, G., and D. H. Hall. 1994. Gene expression: a paradigm of integrated circuits, p. 127-131. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 127-131
-
-
Mosig, G.1
Hall, D.H.2
-
50
-
-
0031885651
-
Disruption of a spe-like open reading frame alters polyamine content and psbA-2 mRNA stability in the cyanobacterium Synechocystis sp. PCC 6803
-
Mulo, P., T. Eloranta, E. M. Aro, and P. Maenpaa. 1998. Disruption of a spe-like open reading frame alters polyamine content and psbA-2 mRNA stability in the cyanobacterium Synechocystis sp. PCC 6803. Botanica Acta 111:71-76.
-
(1998)
Botanica Acta
, vol.111
, pp. 71-76
-
-
Mulo, P.1
Eloranta, T.2
Aro, E.M.3
Maenpaa, P.4
-
51
-
-
0041876235
-
The genome of a motile marine Synechococcus
-
Palenik, B., B. Brahamsha, F. W. Larimer, M. Land, L. Hauser, P. Chain, J. Lamerdin, W. Regala, E. E. Allen, J. McCarren, I. Paulsen, A. Dufresne, F. Partensky, E. A. Webb, and J. Waterbury. 2003. The genome of a motile marine Synechococcus. Nature 424:1037-1042.
-
(2003)
Nature
, vol.424
, pp. 1037-1042
-
-
Palenik, B.1
Brahamsha, B.2
Larimer, F.W.3
Land, M.4
Hauser, L.5
Chain, P.6
Lamerdin, J.7
Regala, W.8
Allen, E.E.9
McCarren, J.10
Paulsen, I.11
Dufresne, A.12
Partensky, F.13
Webb, E.A.14
Waterbury, J.15
-
52
-
-
0034548918
-
Nucleotide-sequence-specific and non-specific interactions of T4 DNA polymerase with its own mRNA
-
Pavlov, A. R., and J. D. Karam. 2000. Nucleotide-sequence-specific and non-specific interactions of T4 DNA polymerase with its own mRNA. Nucleic Acids Res. 28:4657-4664.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4657-4664
-
-
Pavlov, A.R.1
Karam, J.D.2
-
53
-
-
0025198355
-
Viral mortality of marine-bacteria and cyanobacteria
-
Proctor, L. M., and J. A. Fuhrman. 1990. Viral mortality of marine-bacteria and cyanobacteria. Nature 343:60-62.
-
(1990)
Nature
, vol.343
, pp. 60-62
-
-
Proctor, L.M.1
Fuhrman, J.A.2
-
54
-
-
0042878464
-
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
-
Rocap, G., F. W. Larimer, J. Lamerdin, S. Malfatti, P. Chain, N. A. Ahlgren, A. Arellano, M. Coleman, L. Hauser, W. R. Hess, Z. I. Johnson, M. Land, D. Lindell, A. F. Post, W. Regala, M. Shah, S. L. Shaw, C. Steglich, M. B. Sullivan, C. S. Ting, A. Tolonen, E. A. Webb, E. R. Zinser, and S. W. Chisholm. 2003. Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature 424:1042-1047.
-
(2003)
Nature
, vol.424
, pp. 1042-1047
-
-
Rocap, G.1
Larimer, F.W.2
Lamerdin, J.3
Malfatti, S.4
Chain, P.5
Ahlgren, N.A.6
Arellano, A.7
Coleman, M.8
Hauser, L.9
Hess, W.R.10
Johnson, Z.I.11
Land, M.12
Lindell, D.13
Post, A.F.14
Regala, W.15
Shah, M.16
Shaw, S.L.17
Steglich, C.18
Sullivan, M.B.19
Ting, C.S.20
Tolonen, A.21
Webb, E.A.22
Zinser, E.R.23
Chisholm, S.W.24
more..
-
55
-
-
0034111671
-
The complete genomic sequence of the marine phage Roseophage SIO1 shares homology with nonmarine phages
-
Rohwer, F., A. Segall, G. Steward, V. Seguritan, M. Breitbart, F. Wolven, and F. Azam. 2000. The complete genomic sequence of the marine phage Roseophage SIO1 shares homology with nonmarine phages. Limnol. Oceanogr. 45:408-418.
-
(2000)
Limnol. Oceanogr.
, vol.45
, pp. 408-418
-
-
Rohwer, F.1
Segall, A.2
Steward, G.3
Seguritan, V.4
Breitbart, M.5
Wolven, F.6
Azam, F.7
-
56
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford, K., J. Parkhill, J. Crook, T. Horsnell, P. Rice, M. A. Rajandream, and B. Barrell. 2000. Artemis: sequence visualization and annotation. Bioinformatics 16:944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
57
-
-
19044368845
-
Envelope structure of Synechococcus sp. WH8113, a nonflagellated swimming cyanobacterium
-
Samuel, A. D., J. D. Petersen, and T. S. Reese. 2001. Envelope structure of Synechococcus sp. WH8113, a nonflagellated swimming cyanobacterium. BMC Microbiol. 1:4.
-
(2001)
BMC Microbiol.
, vol.1
, pp. 4
-
-
Samuel, A.D.1
Petersen, J.D.2
Reese, T.S.3
-
58
-
-
0037031869
-
A transient exchange of the photosystem II reaction center protein D1: 1 With D1: 2 During low temperature stress of Synechococcus sp. PCC 7942 in the light lowers the redox potential of Q(B)
-
Sane, P. V., A. G. Ivanov, D. Sveshnikov, N. P. A. Huner, and G. Oquist. 2002. A transient exchange of the photosystem II reaction center protein D1: 1 with D1: 2 during low temperature stress of Synechococcus sp. PCC 7942 in the light lowers the redox potential of Q(B). J. Biol. Chem. 277:32739-32745.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 32739-32745
-
-
Sane, P.V.1
Ivanov, A.G.2
Sveshnikov, D.3
Huner, N.P.A.4
Oquist, G.5
-
59
-
-
0033984760
-
S-layer proteins
-
Sara, M., and U. B. Sleytr. 2000. S-layer proteins. J. Bacteriol. 182:859-868.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 859-868
-
-
Sara, M.1
Sleytr, U.B.2
-
60
-
-
0027291857
-
Translational repression by the bacteriophage-T4 gene 32 protein involves specific recognition of an RNA pseudoknot structure
-
Shamoo, Y., A. Tam, W. H. Konigsberg, and K. R. Williams. 1993. Translational repression by the bacteriophage-T4 gene 32 protein involves specific recognition of an RNA pseudoknot structure. J. Mol. Biol. 232:89-104.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 89-104
-
-
Shamoo, Y.1
Tam, A.2
Konigsberg, W.H.3
Williams, K.R.4
-
61
-
-
0036006874
-
S-layers on cell walls of cyanobacteria
-
Smarda, J., D. Smajs, J. Komrska, and V. Krzyzanek. 2002. S-layers on cell walls of cyanobacteria. Micron 33:257-277.
-
(2002)
Micron
, vol.33
, pp. 257-277
-
-
Smarda, J.1
Smajs, D.2
Komrska, J.3
Krzyzanek, V.4
-
62
-
-
0027802137
-
Marine cyanophages infecting oceanic and coastal strains of Synechococcus: Abundance, morphology, cross-infectivity and growth- characteristics
-
Suttle, C. A., and A. M. Chan. 1993. Marine cyanophages infecting oceanic and coastal strains of Synechococcus: abundance, morphology, cross-infectivity and growth-characteristics. Mar. Ecol. Prog. Ser. 92:99-109.
-
(1993)
Mar. Ecol. Prog. Ser.
, vol.92
, pp. 99-109
-
-
Suttle, C.A.1
Chan, A.M.2
-
63
-
-
0025197488
-
Infection of phytoplankton by viruses and reduction of primary productivity
-
Suttle, C. A., A. M. Chan, and M. T. Cottrell. 1990. Infection of phytoplankton by viruses and reduction of primary productivity. Nature 347:467-469.
-
(1990)
Nature
, vol.347
, pp. 467-469
-
-
Suttle, C.A.1
Chan, A.M.2
Cottrell, M.T.3
-
64
-
-
0035180718
-
Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages
-
Tétart, F., C. Desplats, M. Kutateladze, C. Monod, H. W. Ackermann, and H. M. Krisch. 2001. Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages. J. Bacteriol. 183:358-366.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 358-366
-
-
Tétart, F.1
Desplats, C.2
Kutateladze, M.3
Monod, C.4
Ackermann, H.W.5
Krisch, H.M.6
-
65
-
-
0342576226
-
Bacteriophage T4 host range is expanded by duplications of a small domain of the tail fiber adhesin
-
Tétart, F., F. Repoila, C. Monod, and H. M. Krisch. 1996. Bacteriophage T4 host range is expanded by duplications of a small domain of the tail fiber adhesin. J. Mol. Biol. 258:726-731.
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 726-731
-
-
Tétart, F.1
Repoila, F.2
Monod, C.3
Krisch, H.M.4
-
66
-
-
0031753703
-
Efficiency and frequency of translational coupling between the bacteriophage T4 clamp loader genes
-
Torgov, M. Y., D. M. Janzen, and M. K. Reddy. 1998. Efficiency and frequency of translational coupling between the bacteriophage T4 clamp loader genes. J. Bacteriol. 180:4339-4343.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4339-4343
-
-
Torgov, M.Y.1
Janzen, D.M.2
Reddy, M.K.3
-
67
-
-
0032561132
-
Principles governing amino acid composition of integral membrane proteins: Application to topology prediction
-
Tusnady, G. E., and I. Simon. 1998. Principles governing amino acid composition of integral membrane proteins: application to topology prediction. J. Mol. Biol. 283:489-506.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 489-506
-
-
Tusnady, G.E.1
Simon, I.2
-
68
-
-
0030901237
-
Seasonal and spatial variability in phytoplankton biomass, productivity and growth in the northwestern Indian Ocean: The southwest and northeast monsoon, 1992-1993
-
Veldhuis, M. J. W., G. W. Kraay, J. D. L. VanBleijswijk, and M. A. Baars. 1997. Seasonal and spatial variability in phytoplankton biomass, productivity and growth in the northwestern Indian Ocean: the southwest and northeast monsoon, 1992-1993. Deep Sea Res. Part I 44:425-449.
-
(1997)
Deep Sea Res. Part I
, vol.44
, pp. 425-449
-
-
Veldhuis, M.J.W.1
Kraay, G.W.2
VanBleijswijk, J.D.L.3
Baars, M.A.4
-
69
-
-
0027329223
-
Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
-
Waterbury, J. B., and F. W. Valois. 1993. Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater. Appl. Environ. Microbiol. 59:3393-3399.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 3393-3399
-
-
Waterbury, J.B.1
Valois, F.W.2
-
70
-
-
0038154169
-
Homotrimeric, beta-stranded viral adhesins and tail proteins
-
Weigele, P. R., E. Scanlon, and J. King. 2003. Homotrimeric, beta-stranded viral adhesins and tail proteins. J. Bacteriol. 185:4022-4030.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4022-4030
-
-
Weigele, P.R.1
Scanlon, E.2
King, J.3
-
71
-
-
0002395212
-
Transcription from early promoters
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Wilkens, K., and W. Ruger. 1994. Transcription from early promoters, p. 132-141. In J. D. Karam (ed.), Molecular biology of phage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Phage T4
, pp. 132-141
-
-
Wilkens, K.1
Ruger, W.2
-
72
-
-
0000966005
-
Regulation of late gene expression
-
J. Karam, J. W. Drake, K. N. Kreuzer, G. Mosig, D. H. Hall, F. A. Eiserling, L. W. Black, E. K. Spicer, E. Kutter, K. Carlson, and E. S. Miller (ed.) American Society for Microbiology, Washington D.C.
-
Williams, K. P., G. A. Kassavetis, D. R. Herendeen, and E. P. Geiduschek. 1994. Regulation of late gene expression, p. 161-175. In J. Karam, J. W. Drake, K. N. Kreuzer, G. Mosig, D. H. Hall, F. A. Eiserling, L. W. Black, E. K. Spicer, E. Kutter, K. Carlson, and E. S. Miller (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 161-175
-
-
Williams, K.P.1
Kassavetis, G.A.2
Herendeen, D.R.3
Geiduschek, E.P.4
-
73
-
-
0029837291
-
The effect of phosphate status on the kinetics of cyanophage infection in the oceanic cyanobacterium Synechococcus sp. WH7803
-
Wilson, W. H., N. G. Carr, and N. H. Mann. 1996. The effect of phosphate status on the kinetics of cyanophage infection in the oceanic cyanobacterium Synechococcus sp. WH7803. J. Phycol. 32:506-516.
-
(1996)
J. Phycol.
, vol.32
, pp. 506-516
-
-
Wilson, W.H.1
Carr, N.G.2
Mann, N.H.3
-
74
-
-
0027376914
-
Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. strain WH7803
-
Wilson, W. H., I. R. Joint, N. G. Carr, and N. H. Mann. 1993. Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. strain WH7803. Appl. Environ. Microbiol. 59:3736-3743.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 3736-3743
-
-
Wilson, W.H.1
Joint, I.R.2
Carr, N.G.3
Mann, N.H.4
-
76
-
-
0001754791
-
Long tail fibers: Proteins, structure and assembly
-
J. D. Karam (ed.) American Society for Microbiology, Washington, D.C.
-
Wood, W. B., F. A. Eiserling, and R. A. Crowther. 1994. Long tail fibers: proteins, structure and assembly, p. 282-290. In J. D. Karam (ed.), Molecular biology of bacteriophage T4. American Society for Microbiology, Washington, D.C.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 282-290
-
-
Wood, W.B.1
Eiserling, F.A.2
Crowther, R.A.3
-
77
-
-
0030940133
-
Lipopolysaccharide dependence of cyanophage sensitivity and aerobic nitrogen fixation in Anabaena sp. strain PCC 7120
-
Xu, X., I. Khudyakov, and C. P. Wolk. 1997. Lipopolysaccharide dependence of cyanophage sensitivity and aerobic nitrogen fixation in Anabaena sp. strain PCC 7120. J. Bacteriol. 179:2884-2891.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 2884-2891
-
-
Xu, X.1
Khudyakov, I.2
Wolk, C.P.3
|