-
1
-
-
0001578518
-
A learning algorithm for Boltzmann machines
-
Ackley D.H, Hinton G.E, and Sejnowski T.J. (1985). A learning algorithm for Boltzmann machines. Cogn. Sci. 9, 147-169.
-
(1985)
Cogn. Sci
, vol.9
, pp. 147-169
-
-
Ackley, D.H.1
Hinton, G.E.2
Sejnowski, T.J.3
-
2
-
-
84897459814
-
An atlas of active enhancers across human cell types and tissues
-
Andersson R, Gebhard C, Miguel-Escalada I, et al. (2014). An atlas of active enhancers across human cell types and tissues. Nature. 507, 455-461.
-
(2014)
Nature
, vol.507
, pp. 455-461
-
-
Andersson, R.1
Gebhard, C.2
Miguel-Escalada, I.3
-
4
-
-
84857819132
-
Theano: A CPU and GPU math expression compiler, 1-7
-
van der Walt S, and Millman J, eds. Austin, Texas
-
Bergstra J, Breuleux O, Bastien F, et al. (2010). Theano: a CPU and GPU math expression compiler, 1-7. In van der Walt S, and Millman J, eds. Proceedings of the Python for Scientific Computing Conference (SciPy), Austin, Texas
-
(2010)
Proceedings of the Python for Scientific Computing Conference (SciPy
-
-
Bergstra, J.1
Breuleux, O.2
Bastien, F.3
-
5
-
-
0002709342
-
Feature selection via concave minimization and support vector machines
-
In Shavlik J.W, ed. Morgan Kaufmann Publishers Inc, California
-
Bradley P.S, and Mangasarian O.L. (1998). Feature selection via concave minimization and support vector machines, 82-90. In Shavlik J.W, ed. Proceedings of the Fifteenth International Conference on Machine Learning. Morgan Kaufmann Publishers Inc, California
-
(1998)
Proceedings of the Fifteenth International Conference on Machine Learning
, pp. 82-90
-
-
Bradley, P.S.1
Mangasarian, O.L.2
-
6
-
-
0030965242
-
Transcriptional activity and constitutive nuclear localization of the ETS protein Elf-1
-
Bredemeier-Ernst I, Nordheim A, and Janknecht R. (1997). Transcriptional activity and constitutive nuclear localization of the ETS protein Elf-1. FEBS Lett. 408, 47-51.
-
(1997)
FEBS Lett
, vol.408
, pp. 47-51
-
-
Bredemeier-Ernst, I.1
Nordheim, A.2
Janknecht, R.3
-
7
-
-
0035478854
-
Random forests
-
Breiman L. (2001). Random forests. Mach. Learn. 45, 5-32.
-
(2001)
Mach. Learn
, vol.45
, pp. 5-32
-
-
Breiman, L.1
-
8
-
-
84863167108
-
Multi-class l2, 1-norm support vector machine
-
IEEE, IEEE Press, Piscataway, NJ
-
Cai X, Nie F, Huang H, et al. (2011). Multi-class l2, 1-norm support vector machine, 91-100. In 19th IEEE International Conference on Data Mining. IEEE, IEEE Press, Piscataway, NJ.
-
(2011)
19th IEEE International Conference on Data Mining
, pp. 91-100
-
-
Cai, X.1
Nie, F.2
Huang, H.3
-
10
-
-
77950537175
-
Regularization paths for generalized linear models via coordinate descent
-
Friedman J, Hastie T, and Tibshirani R. (2010). Regularization paths for generalized linear models via coordinate descent. J. Stat. Softw. 33, 1-22.
-
(2010)
J. Stat. Softw
, vol.33
, pp. 1-22
-
-
Friedman, J.1
Hastie, T.2
Tibshirani, R.3
-
12
-
-
33746600649
-
Reducing the dimensionality of data with neural networks
-
Hinton G, and Salakhutdinov R. (2006). Reducing the dimensionality of data with neural networks. Science. 313, 504-507.
-
(2006)
Science
, vol.313
, pp. 504-507
-
-
Hinton, G.1
Salakhutdinov, R.2
-
13
-
-
33745805403
-
A fast learning algorithm for deep belief nets
-
Hinton G.E, Osindero S, and Teh Y. (2006). A fast learning algorithm for deep belief nets. Neural Comput. 18, 1527-1554.
-
(2006)
Neural Comput
, vol.18
, pp. 1527-1554
-
-
Hinton, G.E.1
Osindero, S.2
Teh, Y.3
-
14
-
-
79956081339
-
The transcription factor BATF controls the global regulators of classswitch recombination in both B cells and T cells
-
Ise W, Kohyama M, Schraml B.U, et al. (2011). The transcription factor BATF controls the global regulators of classswitch recombination in both B cells and T cells. Nat. Immunol. 12, 536-543.
-
(2011)
Nat. Immunol
, vol.12
, pp. 536-543
-
-
Ise, W.1
Kohyama, M.2
Schraml, B.U.3
-
15
-
-
83055187059
-
Robust nonnegative matrix factorization using l21-norm
-
In Berendt B, de Vries A, Fan W, et al. eds. ACM Press, New York
-
Kong D, Ding C, and Huang H. (2011). Robust nonnegative matrix factorization using l21-norm, 673-682. In Berendt B, de Vries A, Fan W, et al. eds. Proceedings of the 20th ACM International Conference on Information and Knowledge Management. ACM Press, New York
-
(2011)
Proceedings of the 20th ACM International Conference on Information and Knowledge Management
, pp. 673-682
-
-
Kong, D.1
Ding, C.2
Huang, H.3
-
16
-
-
77951073899
-
Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns
-
Kratz A, Arner E, Saito R, et al. (2010). Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns. BMC Genomics. 11, 257.
-
(2010)
BMC Genomics
, vol.11
, pp. 257
-
-
Kratz, A.1
Arner, E.2
Saito, R.3
-
17
-
-
0032203257
-
Gradient-based learning applied to document recognition
-
LeCun Y, Bottou L, Bengio Y, et al. (1998). Gradient-based learning applied to document recognition. Proc. IEEE. 86, 2278-2324.
-
(1998)
Proc. IEEE
, vol.86
, pp. 2278-2324
-
-
LeCun, Y.1
Bottou, L.2
Bengio, Y.3
-
18
-
-
84876435579
-
The BCL11A transcription factor directly activates rag gene expression and V(D)J recombination
-
Lee B.S, Dekker J.D, Lee B.K, et al. (2013). The BCL11A transcription factor directly activates rag gene expression and V(D)J recombination. Mol. Cell Biol. 33, 1768-1781.
-
(2013)
Mol. Cell Biol
, vol.33
, pp. 1768-1781
-
-
Lee, B.S.1
Dekker, J.D.2
Lee, B.K.3
-
19
-
-
84881249254
-
Classification approach based on non-negative least squares
-
Li Y, and Ngom A. (2013). Classification approach based on non-negative least squares. Neurocomputing. 118, 41-57.
-
(2013)
Neurocomputing
, vol.118
, pp. 41-57
-
-
Li, Y.1
Ngom, A.2
-
22
-
-
84969215153
-
-
LISA Lab. Available at
-
LISA Lab. (2013). Deep learning tutorials. Available at: http://deeplearning.net/tutorial
-
(2013)
Deep Learning Tutorials
-
-
-
24
-
-
84880780575
-
Transcription factor EBF1 is essential for the maintenance of B cell identity and prevention of alternative fates in committed cells
-
Nechanitzky R, Akbas D, Scherer S, et al. (2013). Transcription factor EBF1 is essential for the maintenance of B cell identity and prevention of alternative fates in committed cells. Nat. Immunol. 14, 867-875.
-
(2013)
Nat. Immunol
, vol.14
, pp. 867-875
-
-
Nechanitzky, R.1
Akbas, D.2
Scherer, S.3
-
25
-
-
85135939782
-
Efficient and robust feature selection via joint l2, 1-norms minimization
-
In Lafferty J, Williams C, Shawe-Taylor J, et al. eds. Curran Associates Inc, New York
-
Nie F, Huang H, Cai X, et al. (2010). Efficient and robust feature selection via joint l2, 1-norms minimization, 1813-1821. In Lafferty J, Williams C, Shawe-Taylor J, et al. eds. Advances in Neural Information Processing Systems 23. Curran Associates Inc, New York
-
(2010)
Advances in Neural Information Processing Systems 23
, pp. 1813-1821
-
-
Nie, F.1
Huang, H.2
Cai, X.3
-
26
-
-
79953680185
-
Nuclear factor i revealed as family of promoter binding transcription activators
-
Pjanic M, Pjanic P, Schmid C, et al. (2011). Nuclear factor I revealed as family of promoter binding transcription activators. BMC Genomics. 12, 181.
-
(2011)
BMC Genomics
, vol.12
, pp. 181
-
-
Pjanic, M.1
Pjanic, P.2
Schmid, C.3
-
27
-
-
0031114483
-
GeneCards: Integrating information about genes, proteins and diseases
-
Rebhan M, Chalifa-Caspi V, Prilusky J, et al. (1997). GeneCards: integrating information about genes, proteins and diseases. Trends Genet. 13, 163.
-
(1997)
Trends Genet
, vol.13
, pp. 163
-
-
Rebhan, M.1
Chalifa-Caspi, V.2
Prilusky, J.3
-
29
-
-
84899450857
-
Transcriptional enhancers: From properties to genome-wide predictions
-
Shlyueva D, Stampfel G, and Stark A. (2014). Transcriptional enhancers: from properties to genome-wide predictions. Nat. Rev. Genet. 15, 272-286.
-
(2014)
Nat. Rev. Genet
, vol.15
, pp. 272-286
-
-
Shlyueva, D.1
Stampfel, G.2
Stark, A.3
-
30
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
The ENCODE Project Consortium
-
The ENCODE Project Consortium. (2012). An integrated encyclopedia of DNA elements in the human genome. Nature. 489, 57-74.
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
31
-
-
84897406127
-
A promoter-level mammalian expression atlas
-
The FANTOM Consortium, The RIKEN PMI, CLST (DGT
-
The FANTOM Consortium, The RIKEN PMI, and CLST (DGT). (2014). A promoter-level mammalian expression atlas. Nature. 507, 462-470.
-
(2014)
Nature
, vol.507
, pp. 462-470
-
-
-
33
-
-
33845451555
-
Profile of histone lysine methylation across transcribed mammalian chromatin
-
Vakoc C.R, Sachdeva M.M, Wang H, et al. (2006). Profile of histone lysine methylation across transcribed mammalian chromatin. Mol. Cell. Biol. 26, 9185-9195.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 9185-9195
-
-
Vakoc, C.R.1
Sachdeva, M.M.2
Wang, H.3
-
34
-
-
84898021970
-
H3K4me2 reliably defines transcription factor binding regions in different cells
-
Wang Y, Li X, and Hua H. (2014). H3K4me2 reliably defines transcription factor binding regions in different cells. Genomics. 103, 222-228.
-
(2014)
Genomics
, vol.103
, pp. 222-228
-
-
Wang, Y.1
Li, X.2
Hua, H.3
-
35
-
-
78650304236
-
Charting histone modifications and the functional organization of mammalian genomes
-
Zhou V.M, Goren A, and Bernstein B.E. (2011). Charting histone modifications and the functional organization of mammalian genomes. Nat. Rev. Genet. 12, 7-18.
-
(2011)
Nat. Rev. Genet
, vol.12
, pp. 7-18
-
-
Zhou, V.M.1
Goren, A.2
Bernstein, B.E.3
-
36
-
-
16244401458
-
Regularization and variable selection via the elastic net
-
Zou H, and Hastie T. (2005). Regularization and variable selection via the elastic net. J. R. Stat. Soc. Series B Stat. Methodol. 67, 301-320.
-
(2005)
J. R. Stat. Soc. Series B Stat. Methodol
, vol.67
, pp. 301-320
-
-
Zou, H.1
Hastie, T.2
|