-
1
-
-
84930051032
-
Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery
-
Maio, N., and Rouault, T. A. (2015) Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery. Biochim. Biophys. Acta 1853, 1493-1512
-
(2015)
Biochim. Biophys. Acta
, vol.1853
, pp. 1493-1512
-
-
Maio, N.1
Rouault, T.A.2
-
2
-
-
84864296714
-
The role of mitochondria in cellular iron-sulfur protein biogenesis and iron metabolism
-
Lill, R., Hoffmann, B., Molik, S., Pierik, A. J., Rietzschel, N., Stehling, O., Uzarska, M. A., Webert, H., Wilbrecht, C., and Mühlenhoff, U. (2012) The role of mitochondria in cellular iron-sulfur protein biogenesis and iron metabolism. Biochim. Biophys. Acta 1823, 1491-1508
-
(2012)
Biochim. Biophys. Acta
, vol.1823
, pp. 1491-1508
-
-
Lill, R.1
Hoffmann, B.2
Molik, S.3
Pierik, A.J.4
Rietzschel, N.5
Stehling, O.6
Uzarska, M.A.7
Webert, H.8
Wilbrecht, C.9
Mühlenhoff, U.10
-
3
-
-
84897949661
-
Mitochondrial iron-sulfur cluster dysfunction in neurodegenerative disease
-
Isaya, G. (2014) Mitochondrial iron-sulfur cluster dysfunction in neurodegenerative disease. Front. Pharmacol. 5, 1-7
-
(2014)
Front. Pharmacol.
, vol.5
, pp. 1-7
-
-
Isaya, G.1
-
4
-
-
0030868605
-
Iron-sulfur clusters: Nature?s modular, multipurpose structures
-
Beinert, H., Holm, R. H., and Münck, E. (1997) Iron-sulfur clusters: Nature?s modular, multipurpose structures. Science 277, 653-659
-
(1997)
Science
, vol.277
, pp. 653-659
-
-
Beinert, H.1
Holm, R.H.2
Münck, E.3
-
5
-
-
84926138690
-
Tangled web of interactions among proteins involved in iron-sulfur cluster assembly as unraveled by NMR, SAXS, chemical crosslinking, and functional studies
-
Kim, J. H., Bothe, J. R., Alderson, T. R., and Markley, J. L. (2015) Tangled web of interactions among proteins involved in iron-sulfur cluster assembly as unraveled by NMR, SAXS, chemical crosslinking, and functional studies. Biochim. Biophys. Acta 1853, 1416-1428
-
(2015)
Biochim. Biophys. Acta
, vol.1853
, pp. 1416-1428
-
-
Kim, J.H.1
Bothe, J.R.2
Alderson, T.R.3
Markley, J.L.4
-
6
-
-
84939946161
-
Assembly of Fe/S proteins in bacterial systems: Biochemistry of the bacterial ISC system
-
Blanc, B., Gerez, C., and Ollagnier De Choudens, S. (2015) Assembly of Fe/S proteins in bacterial systems: Biochemistry of the bacterial ISC system. Biochim. Biophys. Acta 1853, 1436-1447
-
(2015)
Biochim. Biophys. Acta
, vol.1853
, pp. 1436-1447
-
-
Blanc, B.1
Gerez, C.2
Ollagnier De Choudens, S.3
-
7
-
-
33745217828
-
Iron-sulfur cluster biosynthesis: Characterization of Escherichia coli CYaY as an iron donor for the assembly of [2Fe-2S] clusters in the scaffold IscU
-
Layer, G., Ollagnier-de Choudens, S., Sanakis, Y., and Fontecave, M. (2006) Iron-sulfur cluster biosynthesis: Characterization of Escherichia coli CYaY as an iron donor for the assembly of [2Fe-2S] clusters in the scaffold IscU. J. Biol. Chem. 281, 16256-16263
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 16256-16263
-
-
Layer, G.1
Ollagnier-De Choudens, S.2
Sanakis, Y.3
Fontecave, M.4
-
8
-
-
69249084026
-
Oligomeric yeast frataxin drives assembly of core machinery for mitochondrial iron-sulfur cluster synthesis
-
Li, H., Gakh, O., Smith, D. Y., 4th, and Isaya, G. (2009) Oligomeric yeast frataxin drives assembly of core machinery for mitochondrial iron-sulfur cluster synthesis. J. Biol. Chem. 284, 21971-21980
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 21971-21980
-
-
Li, H.1
Gakh, O.2
Smith, D.Y.3
Isaya, G.4
-
9
-
-
78649644673
-
Normal and Friedreich ataxia cells express different isoforms of frataxin with complementary roles in iron-sulfur cluster assembly
-
Gakh, O., Bedekovics, T., Duncan, S. F., Smith, D. Y., 4th, Berkholz, D. S., and Isaya, G. (2010) Normal and Friedreich ataxia cells express different isoforms of frataxin with complementary roles in iron-sulfur cluster assembly. J. Biol. Chem. 285, 38486-38501
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 38486-38501
-
-
Gakh, O.1
Bedekovics, T.2
Duncan, S.F.3
Smith, D.Y.4
Berkholz, D.S.5
Isaya, G.6
-
10
-
-
77957676909
-
Molecular details of the yeast frataxin-Isu1 interaction during mitochondrial Fe-S cluster assembly
-
Cook, J. D., Kondapalli, K. C., Rawat, S., Childs, W. C., Murugesan, Y., Dancis, A., and Stemmler, T. L. (2010) Molecular details of the yeast frataxin-Isu1 interaction during mitochondrial Fe-S cluster assembly. Biochemistry 49, 8756-8765
-
(2010)
Biochemistry
, vol.49
, pp. 8756-8765
-
-
Cook, J.D.1
Kondapalli, K.C.2
Rawat, S.3
Childs, W.C.4
Murugesan, Y.5
Dancis, A.6
Stemmler, T.L.7
-
11
-
-
84859178535
-
Effector role reversal during evolution: The case of frataxin in Fe-S cluster biosynthesis
-
Bridwell-Rabb, J., Iannuzzi, C., Pastore, A., and Barondeau, D. P. (2012) Effector role reversal during evolution: The case of frataxin in Fe-S cluster biosynthesis. Biochemistry 51, 2506-2514
-
(2012)
Biochemistry
, vol.51
, pp. 2506-2514
-
-
Bridwell-Rabb, J.1
Iannuzzi, C.2
Pastore, A.3
Barondeau, D.P.4
-
12
-
-
84891379841
-
Frataxin directly stimulates mitochondrial cysteine desulfurase by exposing substrate-binding sites, and a mutant Fe-S cluster scaffold protein with frataxin-bypassing ability acts similarly
-
Pandey, A., Gordon, D. M., Pain, J., Stemmler, T. L., Dancis, A., and Pain, D. (2013) Frataxin directly stimulates mitochondrial cysteine desulfurase by exposing substrate-binding sites, and a mutant Fe-S cluster scaffold protein with frataxin-bypassing ability acts similarly. J. Biol. Chem. 288, 36773-36786
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 36773-36786
-
-
Pandey, A.1
Gordon, D.M.2
Pain, J.3
Stemmler, T.L.4
Dancis, A.5
Pain, D.6
-
13
-
-
84923297058
-
Functional reconstitution of mitochondrial Fe/S cluster synthesis on Isu1 reveals the involvement of ferredoxin
-
Webert, H., Freibert, S. A., Gallo, A., Heidenreich, T., Linne, U., Amlacher, S., Hurt, E., Mühlenhoff, U., Banci, L., and Lill, R. (2014) Functional reconstitution of mitochondrial Fe/S cluster synthesis on Isu1 reveals the involvement of ferredoxin. Nat. Commun. 5, 5013
-
(2014)
Nat. Commun.
, vol.5
, pp. 5013
-
-
Webert, H.1
Freibert, S.A.2
Gallo, A.3
Heidenreich, T.4
Linne, U.5
Amlacher, S.6
Hurt, E.7
Mühlenhoff, U.8
Banci, L.9
Lill, R.10
-
14
-
-
77951749014
-
Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions
-
Shi, R., Proteau, A., Villarroya, M., Moukadiri, I., Zhang, L., Trempe, J. F., Matte, A., Armengod, M. E., and Cygler, M. (2010) Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions. PLos Biol. 8, e1000354
-
(2010)
PLos Biol.
, vol.8
, pp. e1000354
-
-
Shi, R.1
Proteau, A.2
Villarroya, M.3
Moukadiri, I.4
Zhang, L.5
Trempe, J.F.6
Matte, A.7
Armengod, M.E.8
Cygler, M.9
-
15
-
-
84861489997
-
(IscS-IscU)2 complex structures provide insights into Fe2S2 biogenesis and transfer
-
Marinoni, E. N., De Oliveira, J. S., Nicolet, Y., Raulfs, E. C., Amara, P., Dean, D. R., and Fontecilla-Camps, J. C. (2012) (IscS-IscU)2 complex structures provide insights into Fe2S2 biogenesis and transfer. Angew. Chem. Int. Ed. Engl. 51, 5439-5442
-
(2012)
Angew. Chem. Int. Ed. Engl.
, vol.51
, pp. 5439-5442
-
-
Marinoni, E.N.1
De Oliveira, J.S.2
Nicolet, Y.3
Raulfs, E.C.4
Amara, P.5
Dean, D.R.6
Fontecilla-Camps, J.C.7
-
16
-
-
84880288137
-
Structural bases for the interaction of frataxin with the central components of iron-sulphur cluster assembly
-
Prischi, F., Konarev, P. V., Iannuzzi, C., Pastore, C., Adinolfi, S., Martin, S. R., Svergun, D. I., and Pastore, A. (2010) Structural bases for the interaction of frataxin with the central components of iron-sulphur cluster assembly. Nat. Commun. 1, 95
-
(2010)
Nat. Commun.
, vol.1
, pp. 95
-
-
Prischi, F.1
Konarev, P.V.2
Iannuzzi, C.3
Pastore, C.4
Adinolfi, S.5
Martin, S.R.6
Svergun, D.I.7
Pastore, A.8
-
17
-
-
84876408699
-
A dynamic model of the proteins that form the initial iron-sulfur cluster biogenesis machinery in yeast mitochondria
-
Amela, I., Delicado, P., Gómez, A., Querol, E., and Cedano, J. (2013) A dynamic model of the proteins that form the initial iron-sulfur cluster biogenesis machinery in yeast mitochondria. Protein J. 32, 183-196
-
(2013)
Protein J.
, vol.32
, pp. 183-196
-
-
Amela, I.1
Delicado, P.2
Gómez, A.3
Querol, E.4
Cedano, J.5
-
18
-
-
84908632005
-
Overlapping binding sites of the frataxin homologue assembly factor and the heat shock protein 70 transfer factor on the Isu iron-sulfur cluster scaffold protein
-
Manicki, M., Majewska, J., Ciesielski, S., Schilke, B., Blenska, A., Kominek, J., Marszalek, J., Craig, E. A., and Dutkiewicz, R. (2014) Overlapping binding sites of the frataxin homologue assembly factor and the heat shock protein 70 transfer factor on the Isu iron-sulfur cluster scaffold protein. J. Biol. Chem. 289, 30268-30278
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 30268-30278
-
-
Manicki, M.1
Majewska, J.2
Ciesielski, S.3
Schilke, B.4
Blenska, A.5
Kominek, J.6
Marszalek, J.7
Craig, E.A.8
Dutkiewicz, R.9
-
19
-
-
84872552094
-
Mammalian frataxin controls sulfur production and iron entry during de novo Fe4S4 cluster assembly
-
Colin, F., Martelli, A., Clémancey, M., Latour, J. M., Gambarelli, S., Zeppieri, L., Birck, C., Page, A., Puccio, H., and Ollagnier De Choudens, S. (2013) Mammalian frataxin controls sulfur production and iron entry during De novo Fe4S4 cluster assembly. J. Am. Chem. Soc. 135, 733-740
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 733-740
-
-
Colin, F.1
Martelli, A.2
Clémancey, M.3
Latour, J.M.4
Gambarelli, S.5
Zeppieri, L.6
Birck, C.7
Page, A.8
Puccio, H.9
Ollagnier De Choudens, S.10
-
20
-
-
84905674436
-
Human frataxin activates Fe-S cluster biosynthesis by facilitating sulfur transfer chemistry
-
Bridwell-Rabb, J., Fox, N. G., Tsai, C. L., Winn, A. M., and Barondeau, D. P. (2014) Human frataxin activates Fe-S cluster biosynthesis by facilitating sulfur transfer chemistry. Biochemistry 53, 4904-4913
-
(2014)
Biochemistry
, vol.53
, pp. 4904-4913
-
-
Bridwell-Rabb, J.1
Fox, N.G.2
Tsai, C.L.3
Winn, A.M.4
Barondeau, D.P.5
-
21
-
-
0033838364
-
Iron-dependent self-assembly of recombinant yeast frataxin: Implications for Friedreich ataxia
-
Adamec, J., Rusnak, F., Owen, W. G., Naylor, S., Benson, L. M., Gacy, A. M., and Isaya, G. (2000) Iron-dependent self-assembly of recombinant yeast frataxin: Implications for Friedreich ataxia. Am. J. Hum. Genet. 67, 549-562
-
(2000)
Am. J. Hum. Genet.
, vol.67
, pp. 549-562
-
-
Adamec, J.1
Rusnak, F.2
Owen, W.G.3
Naylor, S.4
Benson, L.M.5
Gacy, A.M.6
Isaya, G.7
-
22
-
-
84875410144
-
The molecular basis of iron-induced oligomerization of frataxin and the role of the ferroxidation reaction in oligomerization
-
Söderberg, C. A., Rajan, S., Shkumatov, A. V., Gakh, O., Schaefer, S., Ahlgren, E. C., Svergun, D. I., Isaya, G., and Al-Karadaghi, S. (2013) The molecular basis of iron-induced oligomerization of frataxin and the role of the ferroxidation reaction in oligomerization. J. Biol. Chem. 288, 8156-8167
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 8156-8167
-
-
Söderberg, C.A.1
Rajan, S.2
Shkumatov, A.V.3
Gakh, O.4
Schaefer, S.5
Ahlgren, E.C.6
Svergun, D.I.7
Isaya, G.8
Al-Karadaghi, S.9
-
23
-
-
77952237733
-
Evidence that yeast frataxin is not an iron storage protein in vivo
-
Seguin, A., Sutak, R., Bulteau, A. L., Garcia-Serres, R., Oddou, J. L., Lefevre, S., Santos, R., Dancis, A., Camadro, J. M., Latour, J. M., and Lesuisse, E. (2010) Evidence that yeast frataxin is not an iron storage protein in vivo. Biochim. Biophys. Acta 1802, 531-538
-
(2010)
Biochim. Biophys. Acta
, vol.1802
, pp. 531-538
-
-
Seguin, A.1
Sutak, R.2
Bulteau, A.L.3
Garcia-Serres, R.4
Oddou, J.L.5
Lefevre, S.6
Santos, R.7
Dancis, A.8
Camadro, J.M.9
Latour, J.M.10
Lesuisse, E.11
-
24
-
-
57649116080
-
Assembly of the ironbinding protein frataxin in Saccharomyces cerevisiae responds to dynamic changes in mitochondrial iron influx and stress level
-
Gakh, O., Smith, D. Y., 4th, and Isaya, G. (2008) Assembly of the ironbinding protein frataxin in Saccharomyces cerevisiae responds to dynamic changes in mitochondrial iron influx and stress level. J. Biol. Chem. 283, 31500-31510
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 31500-31510
-
-
Gakh, O.1
Smith, I.V.D.Y.2
Isaya, G.3
-
25
-
-
33749265843
-
The structures of frataxin oligomers reveal the mechanism for the delivery and detoxification of iron
-
Karlberg, T., Schagerlöf, U., Gakh, O., Park, S., Ryde, U., Lindahl, M., Leath, K., Garman, E., Isaya, G., and Al-Karadaghi, S. (2006) The structures of frataxin oligomers reveal the mechanism for the delivery and detoxification of iron. Structure 14, 1535-1546
-
(2006)
Structure
, vol.14
, pp. 1535-1546
-
-
Karlberg, T.1
Schagerlöf, U.2
Gakh, O.3
Park, S.4
Ryde, U.5
Lindahl, M.6
Leath, K.7
Garman, E.8
Isaya, G.9
Al-Karadaghi, S.10
-
26
-
-
0037064027
-
The ferroxidase activity of yeast frataxin
-
Park, S., Gakh, O., Mooney, S. M., and Isaya, G. (2002) The ferroxidase activity of yeast frataxin. J. Biol. Chem. 277, 38589-38595
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 38589-38595
-
-
Park, S.1
Gakh, O.2
Mooney, S.M.3
Isaya, G.4
-
27
-
-
0037846093
-
Structure of frataxin iron cores: An x-ray absorption spectroscopic study
-
Nichol, H., Gakh, O., O?Neill, H. A., Pickering, I. J., Isaya, G., and George, G. N. (2003) Structure of frataxin iron cores: An x-ray absorption spectroscopic study. Biochemistry 42, 5971-5976
-
(2003)
Biochemistry
, vol.42
, pp. 5971-5976
-
-
Nichol, H.1
Gakh, O.2
Oneill, H.A.3
Pickering, I.J.4
Isaya, G.5
George, G.N.6
-
28
-
-
0042232045
-
Yeast frataxin sequentially chaperones and stores iron by coupling protein assembly with iron oxidation
-
Park, S., Gakh, O., O?Neill, H. A., Mangravita, A., Nichol, H., Ferreira, G. C., and Isaya, G. (2003) Yeast frataxin sequentially chaperones and stores iron by coupling protein assembly with iron oxidation. J. Biol. Chem. 278, 31340-31351
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 31340-31351
-
-
Park, S.1
Gakh, O.2
Oneill, H.A.3
Mangravita, A.4
Nichol, H.5
Ferreira, G.C.6
Isaya, G.7
-
29
-
-
33746883937
-
Monomeric yeast frataxin is an iron-binding protein
-
Cook, J. D., Bencze, K. Z., Jankovic, A. D., Crater, A. K., Busch, C. N., Bradley, P. B., Stemmler, A. J., Spaller, M. R., and Stemmler, T. L. (2006) Monomeric yeast frataxin is an iron-binding protein. Biochemistry 45, 7767-7777
-
(2006)
Biochemistry
, vol.45
, pp. 7767-7777
-
-
Cook, J.D.1
Bencze, K.Z.2
Jankovic, A.D.3
Crater, A.K.4
Busch, C.N.5
Bradley, P.B.6
Stemmler, A.J.7
Spaller, M.R.8
Stemmler, T.L.9
-
30
-
-
82555187015
-
Oligomerization propensity and flexibility of yeast frataxin studied by x-ray crystallography and smallangle x-ray scattering
-
Söderberg, C. A., Shkumatov, A. V., Rajan, S., Gakh, O., Svergun, D. I., Isaya, G., and Al-Karadaghi, S. (2011) Oligomerization propensity and flexibility of yeast frataxin studied by x-ray crystallography and smallangle x-ray scattering. J. Mol. Biol. 414, 783-797
-
(2011)
J. Mol. Biol.
, vol.414
, pp. 783-797
-
-
Söderberg, C.A.1
Shkumatov, A.V.2
Rajan, S.3
Gakh, O.4
Svergun, D.I.5
Isaya, G.6
Al-Karadaghi, S.7
-
31
-
-
42449093713
-
Structural basis of the iron storage function of frataxin from single-particle reconstruction of the iron-loaded oligomer
-
Schagerlöf, U., Elmlund, H., Gakh, O., Nordlund, G., Hebert, H., Lindahl, M., Isaya, G., and Al-Karadaghi, S. (2008) Structural basis of the iron storage function of frataxin from single-particle reconstruction of the iron-loaded oligomer. Biochemistry 47, 4948-4954
-
(2008)
Biochemistry
, vol.47
, pp. 4948-4954
-
-
Schagerlöf, U.1
Elmlund, H.2
Gakh, O.3
Nordlund, G.4
Hebert, H.5
Lindahl, M.6
Isaya, G.7
Al-Karadaghi, S.8
-
32
-
-
84876034471
-
Metamorphic protein IscU alternates conformations in the course of its role as the scaffold protein for iron-sulfur cluster biosynthesis and delivery
-
Markley, J. L., Kim, J. H., Dai, Z., Bothe, J. R., Cai, K., Frederick, R. O., and Tonelli, M. (2013) Metamorphic protein IscU alternates conformations in the course of its role as the scaffold protein for iron-sulfur cluster biosynthesis and delivery. FEBS Lett. 587, 1172-1179
-
(2013)
FEBS Lett.
, vol.587
, pp. 1172-1179
-
-
Markley, J.L.1
Kim, J.H.2
Dai, Z.3
Bothe, J.R.4
Cai, K.5
Frederick, R.O.6
Tonelli, M.7
-
33
-
-
7444266901
-
Solution NMR structure of the iron-sulfur cluster assembly protein U (IscU) with zinc bound at the active site
-
Ramelot, T. A., Cort, J. R., Goldsmith-Fischman, S., Kornhaber, G. J., Xiao, R., Shastry, R., Acton, T. B., Honig, B., Montelione, G. T., and Kennedy, M. A. (2004) Solution NMR structure of the iron-sulfur cluster assembly protein U (IscU) with zinc bound at the active site. J. Mol. Biol. 344, 567-583
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 567-583
-
-
Ramelot, T.A.1
Cort, J.R.2
Goldsmith-Fischman, S.3
Kornhaber, G.J.4
Xiao, R.5
Shastry, R.6
Acton, T.B.7
Honig, B.8
Montelione, G.T.9
Kennedy, M.A.10
-
34
-
-
52049096425
-
The asymmetric trimeric architecture of [2Fe-2S] IscU: Implications for its scaffolding during iron-sulfur cluster biosynthesis
-
Shimomura, Y., Wada, K., Fukuyama, K., and Takahashi, Y. (2008) The asymmetric trimeric architecture of [2Fe-2S] IscU: Implications for its scaffolding during iron-sulfur cluster biosynthesis. J. Mol. Biol. 383, 133-143
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 133-143
-
-
Shimomura, Y.1
Wada, K.2
Fukuyama, K.3
Takahashi, Y.4
-
35
-
-
0037197897
-
Cys-328 of IscS and Cys-63 of IscU are the sites of disulfide bridge formation in a covalently bound IscS/IscU complex: Implications for the mechanism of iron-sulfur cluster assembly
-
Kato, S., Mihara, H., Kurihara, T., Takahashi, Y., Tokumoto, U., Yoshimura, T., and Esaki, N. (2002) Cys-328 of IscS and Cys-63 of IscU are the sites of disulfide bridge formation in a covalently bound IscS/IscU complex: Implications for the mechanism of iron-sulfur cluster assembly. Proc. Natl. Acad. Sci. U.S.A. 99, 5948-5952
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 5948-5952
-
-
Kato, S.1
Mihara, H.2
Kurihara, T.3
Takahashi, Y.4
Tokumoto, U.5
Yoshimura, T.6
Esaki, N.7
-
36
-
-
0141623560
-
An interaction between frataxin and Isu1/Nfs1 that is crucial for Fe/S cluster synthesis on Isu1
-
Gerber, J., Mühlenhoff, U., and Lill, R. (2003) An interaction between frataxin and Isu1/Nfs1 that is crucial for Fe/S cluster synthesis on Isu1. EMBO Rep. 4, 906-911
-
(2003)
EMBO Rep.
, vol.4
, pp. 906-911
-
-
Gerber, J.1
Mühlenhoff, U.2
Lill, R.3
-
37
-
-
84926225806
-
Anatomy of an iron-sulfur cluster scaffold protein: Understanding the determinants of [2Fe-2S] cluster stability on IscU
-
Adrover, M., Howes, B. D., Iannuzzi, C., Smulevich, G., and Pastore, A. (2015) Anatomy of an iron-sulfur cluster scaffold protein: Understanding the determinants of [2Fe-2S] cluster stability on IscU. Biochim. Biophys. Acta 1853, 1448-1456
-
(2015)
Biochim. Biophys. Acta
, vol.1853
, pp. 1448-1456
-
-
Adrover, M.1
Howes, B.D.2
Iannuzzi, C.3
Smulevich, G.4
Pastore, A.5
-
38
-
-
80155203873
-
Facilitated transfer of IscU-[2Fe2S] clusters by chaperone-mediated ligand exchange
-
Bonomi, F., Iametti, S., Morleo, A., Ta, D., and Vickery, L. E. (2011) Facilitated transfer of IscU-[2Fe2S] clusters by chaperone-mediated ligand exchange. Biochemistry 50, 9641-9650
-
(2011)
Biochemistry
, vol.50
, pp. 9641-9650
-
-
Bonomi, F.1
Iametti, S.2
Morleo, A.3
Ta, D.4
Vickery, L.E.5
-
39
-
-
67650033430
-
Structure and dynamics of the iron-sulfur cluster assembly scaffold protein IscU and its interaction with the cochaperone HscB
-
Kim, J. H., Füzéry, A. K., Tonelli, M., Ta, D. T., Westler, W. M., Vickery, L. E., and Markley, J. L. (2009) Structure and dynamics of the iron-sulfur cluster assembly scaffold protein IscU and its interaction with the cochaperone HscB. Biochemistry 48, 6062-6071
-
(2009)
Biochemistry
, vol.48
, pp. 6062-6071
-
-
Kim, J.H.1
Füzéry, A.K.2
Tonelli, M.3
Ta, D.T.4
Westler, W.M.5
Vickery, L.E.6
Markley, J.L.7
-
40
-
-
33845332754
-
EMAN2: An extensible image processing suite for electron microscopy
-
Tang, G., Peng, L., Baldwin, P. R., Mann, D. S., Jiang, W., Rees, I., and Ludtke, S. J. (2007) EMAN2: An extensible image processing suite for electron microscopy. J. Struct. Biol. 157, 38-46
-
(2007)
J. Struct. Biol.
, vol.157
, pp. 38-46
-
-
Tang, G.1
Peng, L.2
Baldwin, P.R.3
Mann, D.S.4
Jiang, W.5
Rees, I.6
Ludtke, S.J.7
-
41
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
42
-
-
84979850726
-
I-TASSER server: New development for protein structure and function predictions
-
Yang, J., and Zhang, Y. (2015) I-TASSER server: New development for protein structure and function predictions. Nucleic Acids Res. 43, W174-W181
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. 174-181
-
-
Yang, J.1
Zhang, Y.2
-
43
-
-
42949089487
-
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
-
Trabuco, L. G., Villa, E., Mitra, K., Frank, J., and Schulten, K. (2008) Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structure 16, 673-683
-
(2008)
Structure
, vol.16
, pp. 673-683
-
-
Trabuco, L.G.1
Villa, E.2
Mitra, K.3
Frank, J.4
Schulten, K.5
-
44
-
-
70349267547
-
Molecular dynamics flexible fitting: A practical guide to combine cryo-electron microscopy and x-ray crystallography
-
Trabuco, L. G., Villa, E., Schreiner, E., Harrison, C. B., and Schulten, K. (2009) Molecular dynamics flexible fitting: A practical guide to combine cryo-electron microscopy and x-ray crystallography. Methods 49, 174-180
-
(2009)
Methods
, vol.49
, pp. 174-180
-
-
Trabuco, L.G.1
Villa, E.2
Schreiner, E.3
Harrison, C.B.4
Schulten, K.5
-
45
-
-
80052442678
-
Symmetry-restrained flexible fitting for symmetric em maps
-
Chan, K. Y., Gumbart, J., McGreevy, R., Watermeyer, J. M., Sewell, B. T., and Schulten, K. (2011) Symmetry-restrained flexible fitting for symmetric EM maps. Structure 19, 1211-1218
-
(2011)
Structure
, vol.19
, pp. 1211-1218
-
-
Chan, K.Y.1
Gumbart, J.2
McGreevy, R.3
Watermeyer, J.M.4
Sewell, B.T.5
Schulten, K.6
-
46
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., and Cowtan, K. (2010) Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 66, 486-501
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
47
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen, V. B., Arendall, W. B., 3rd, Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S., and Richardson, D. C. (2010) MolProbity: All-atom structure validation for macromolecular crystallography. Acta Crystallogr. D Biol. Crystallogr. 66, 12-21
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
48
-
-
47749144375
-
Chances and pitfalls of chemical crosslinking with amine-reactive N-hydroxysuccinimide esters
-
Kalkhof, S., and Sinz, A. (2008) Chances and pitfalls of chemical crosslinking with amine-reactive N-hydroxysuccinimide esters. Anal. Bioanal. Chem. 392, 305-312
-
(2008)
Anal. Bioanal. Chem.
, vol.392
, pp. 305-312
-
-
Kalkhof, S.1
Sinz, A.2
-
49
-
-
73549098169
-
Role of arginine in chemical cross-linking with N-hydroxysuccinimide esters
-
Mädler, S., Gschwind, S., and Zenobi, R. (2010) Role of arginine in chemical cross-linking with N-hydroxysuccinimide esters. Anal. Biochem. 398, 123-125
-
(2010)
Anal. Biochem.
, vol.398
, pp. 123-125
-
-
Mädler, S.1
Gschwind, S.2
Zenobi, R.3
-
50
-
-
77958143484
-
Proteome analysis of human aqueous humor
-
Chowdhury, U. R., Madden, B. J., Charlesworth, M. C., and Fautsch, M. P. (2010) Proteome analysis of human aqueous humor. Invest. Ophthalmol. Vis. Sci. 51, 4921-4931
-
(2010)
Invest. Ophthalmol. Vis. Sci.
, vol.51
, pp. 4921-4931
-
-
Chowdhury, U.R.1
Madden, B.J.2
Charlesworth, M.C.3
Fautsch, M.P.4
-
51
-
-
84885205763
-
Immunodepletion plasma proteomics by tripleTOF 5600 and Orbitrap elite/LTQ-Orbitrap Velos/Q exactive mass spectrometers
-
Jones, K. A., Kim, P. D., Patel, B. B., Kelsen, S. G., Braverman, A., Swinton, D. J., Gafken, P. R., Jones, L. A., Lane, W. S., Neveu, J. M., Leung, H. C., Shaffer, S. A., Leszyk, J. D., Stanley, B. A., Fox, T. E., et al. (2013) Immunodepletion plasma proteomics by tripleTOF 5600 and Orbitrap elite/LTQ-Orbitrap Velos/Q exactive mass spectrometers. J. Proteome Res. 12, 4351-4365
-
(2013)
J. Proteome Res.
, vol.12
, pp. 4351-4365
-
-
Jones, K.A.1
Kim, P.D.2
Patel, B.B.3
Kelsen, S.G.4
Braverman, A.5
Swinton, D.J.6
Gafken, P.R.7
Jones, L.A.8
Lane, W.S.9
Neveu, J.M.10
Leung, H.C.11
Shaffer, S.A.12
Leszyk, J.D.13
Stanley, B.A.14
Fox, T.E.15
-
52
-
-
84856158133
-
StavroX-a software for analyzing crosslinked products in protein interaction studies
-
Götze, M., Pettelkau, J., Schaks, S., Bosse, K., Ihling, C. H., Krauth, F., Fritzsche, R., Kühn, U., and Sinz, A. (2012) StavroX-a software for analyzing crosslinked products in protein interaction studies. J. Am. Soc. Mass Spectrom. 23, 76-87
-
(2012)
J. Am. Soc. Mass Spectrom.
, vol.23
, pp. 76-87
-
-
Götze, M.1
Pettelkau, J.2
Schaks, S.3
Bosse, K.4
Ihling, C.H.5
Krauth, F.6
Fritzsche, R.7
Kühn, U.8
Sinz, A.9
-
53
-
-
0036014778
-
Rearrangement of Cruickshank?s formulae for the diffraction-component precision index
-
Blow, D. M. (2002) Rearrangement of Cruickshank?s formulae for the diffraction-component precision index. Acta Crystallogr. D Biol. Crystallogr. 58, 792-797
-
(2002)
Acta Crystallogr. D Biol. Crystallogr.
, vol.58
, pp. 792-797
-
-
Blow, D.M.1
-
54
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel, E., and Henrick, K. (2007) Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 372, 774-797
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
55
-
-
79952114848
-
3-D structures of macromolecules using single-particle analysis in EMAN
-
Ludtke, S. J. (2010) 3-D structures of macromolecules using single-particle analysis in EMAN. Methods Mol. Biol. 673, 157-173
-
(2010)
Methods Mol. Biol.
, vol.673
, pp. 157-173
-
-
Ludtke, S.J.1
-
56
-
-
84885866614
-
Single-particle cryo-EM of calcium release channels: Structural validation
-
Ludtke, S. J., and Serysheva, I. I. (2013) Single-particle cryo-EM of calcium release channels: Structural validation. Curr. Opin. Struct. Biol. 23, 755-762
-
(2013)
Curr. Opin. Struct. Biol.
, vol.23
, pp. 755-762
-
-
Ludtke, S.J.1
Serysheva, I.I.2
-
57
-
-
34247144173
-
Posttranslational cleavage of recombinantly expressed nitrilase from Rhodococcus rhodochrous J1 yields a stable, active helical form
-
Thuku, R. N., Weber, B. W., Varsani, A., and Sewell, B. T. (2007) Posttranslational cleavage of recombinantly expressed nitrilase from Rhodococcus rhodochrous J1 yields a stable, active helical form. FEBS J. 274, 2099-2108
-
(2007)
FEBS J.
, vol.274
, pp. 2099-2108
-
-
Thuku, R.N.1
Weber, B.W.2
Varsani, A.3
Sewell, B.T.4
-
58
-
-
77955381399
-
Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics
-
Leitner, A., Walzthoeni, T., Kahraman, A., Herzog, F., Rinner, O., Beck, M., and Aebersold, R. (2010) Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics. Mol. Cell. Proteomics 9, 1634-1649
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 1634-1649
-
-
Leitner, A.1
Walzthoeni, T.2
Kahraman, A.3
Herzog, F.4
Rinner, O.5
Beck, M.6
Aebersold, R.7
-
59
-
-
33747621648
-
The structure and function of frataxin
-
Bencze, K. Z., Kondapalli, K. C., Cook, J. D., McMahon, S., Millán-Pacheco, C., Pastor, N., and Stemmler, T. L. (2006) The structure and function of frataxin. Crit. Rev. Biochem. Mol. Biol. 41, 269-291
-
(2006)
Crit. Rev. Biochem. Mol. Biol.
, vol.41
, pp. 269-291
-
-
Bencze, K.Z.1
Kondapalli, K.C.2
Cook, J.D.3
McMahon, S.4
Millán-Pacheco, C.5
Pastor, N.6
Stemmler, T.L.7
-
60
-
-
34547760795
-
Understanding the binding properties of an unusual metal-binding protein-a study of bacterial frataxin
-
Pastore, C., Franzese, M., Sica, F., Temussi, P., and Pastore, A. (2007) Understanding the binding properties of an unusual metal-binding protein-a study of bacterial frataxin. FEBS J. 274, 4199-4210
-
(2007)
FEBS J.
, vol.274
, pp. 4199-4210
-
-
Pastore, C.1
Franzese, M.2
Sica, F.3
Temussi, P.4
Pastore, A.5
-
61
-
-
84923107253
-
Mammalian frataxin directly enhances sulfur transfer of NFS1 persulfide to both ISCU and free thiols
-
Parent, A., Elduque, X., Cornu, D., Belot, L., Le Caer, J. P., Grandas, A., Toledano, M. B., and D?Autréaux, B. (2015) Mammalian frataxin directly enhances sulfur transfer of NFS1 persulfide to both ISCU and free thiols. Nat. Commun. 6, 5686
-
(2015)
Nat. Commun.
, vol.6
, pp. 5686
-
-
Parent, A.1
Elduque, X.2
Cornu, D.3
Belot, L.4
Le Caer, J.P.5
Grandas, A.6
Toledano, M.B.7
Dautréaux, B.8
-
62
-
-
84885125562
-
Binding of the chaperone Jac1 protein and cysteine desulfurase Nfs1 to the iron-sulfur cluster scaffold Isu protein is mutually exclusive
-
Majewska, J., Ciesielski, S. J., Schilke, B., Kominek, J., Blenska, A., Delewski, W., Song, J. Y., Marszalek, J., Craig, E. A., and Dutkiewicz, R. (2013) Binding of the chaperone Jac1 protein and cysteine desulfurase Nfs1 to the iron-sulfur cluster scaffold Isu protein is mutually exclusive. J. Biol. Chem. 288, 29134-29142
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 29134-29142
-
-
Majewska, J.1
Ciesielski, S.J.2
Schilke, B.3
Kominek, J.4
Blenska, A.5
Delewski, W.6
Song, J.Y.7
Marszalek, J.8
Craig, E.A.9
Dutkiewicz, R.10
-
63
-
-
0033559374
-
Ferroxidase activity of ferritin: Effects of pH, buffer and Fe(II) and Fe (III) concentrations on Fe(II) autoxidation and ferroxidation
-
Yang, X., and Chasteen, N. D. (1999) Ferroxidase activity of ferritin: Effects of pH, buffer and Fe(II) and Fe(III) concentrations on Fe(II) autoxidation and ferroxidation. Biochem. J. 338, 615-618
-
(1999)
Biochem. J.
, vol.338
, pp. 615-618
-
-
Yang, X.1
Chasteen, N.D.2
-
64
-
-
0344820730
-
Friedreich?s ataxia: Point mutations and clinical presentation of compound heterozygotes
-
Cossée, M., Dürr, A., Schmitt, M., Dahl, N., Trouillas, P., Allinson, P., Kostrzewa, M., Nivelon-Chevallier, A., Gustavson, K. H., Kohlschütter, A., Müller, U., Mandel, J. L., Brice, A., Koenig, M., Cavalcanti, F., et al. (1999) Friedreich?s ataxia: Point mutations and clinical presentation of compound heterozygotes. Ann. Neurol. 45, 200-206
-
(1999)
Ann. Neurol.
, vol.45
, pp. 200-206
-
-
Cossée, M.1
Dürr, A.2
Schmitt, M.3
Dahl, N.4
Trouillas, P.5
Allinson, P.6
Kostrzewa, M.7
Nivelon-Chevallier, A.8
Gustavson, K.H.9
Kohlschütter, A.10
Müller, U.11
Mandel, J.L.12
Brice, A.13
Koenig, M.14
Cavalcanti, F.15
|