-
1
-
-
80053359585
-
The genome of the green anole lizard and a comparative analysis with birds and mammals
-
Alföldi J., Di Palma F., Grabherr M., Williams C., Kong L., Mauceli E., Russell P., Lowe C.B., Glor R.E., Jaffe J.D., Ray D.A., Boissinot S., Shedlock A.M., Botka C., Castoe T.A., Colbourne J.K., Fujita M.K., Godinez Moreno R., ten Hallers B.F., Haussler D., Heger A., Heiman D., Janes D.E., Johnson J., de Jong P.J., Koriabine M.Y., Lara M., Novick P.A., Organ C.L., Peach S.E., Poe S., Pollock D.D., de Queiroz K., Sanger T., Searle S., Smith J.D., Smith Z., Swofford R., Turner-Maier J., Wade J., Young S., Zadissa A., Edwards S.V., Glenn T.C., Schneider C.J., Losos J.B., Lander M.B., Ponting C.P., Lindblad-Toh K. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature 2011, 477:587-591.
-
(2011)
Nature
, vol.477
, pp. 587-591
-
-
Alföldi, J.1
Di Palma, F.2
Grabherr, M.3
Williams, C.4
Kong, L.5
Mauceli, E.6
Russell, P.7
Lowe, C.B.8
Glor, R.E.9
Jaffe, J.D.10
Ray, D.A.11
Boissinot, S.12
Shedlock, A.M.13
Botka, C.14
Castoe, T.A.15
Colbourne, J.K.16
Fujita, M.K.17
Godinez Moreno, R.18
ten Hallers, B.F.19
Haussler, D.20
Heger, A.21
Heiman, D.22
Janes, D.E.23
Johnson, J.24
de Jong, P.J.25
Koriabine, M.Y.26
Lara, M.27
Novick, P.A.28
Organ, C.L.29
Peach, S.E.30
Poe, S.31
Pollock, D.D.32
de Queiroz, K.33
Sanger, T.34
Searle, S.35
Smith, J.D.36
Smith, Z.37
Swofford, R.38
Turner-Maier, J.39
Wade, J.40
Young, S.41
Zadissa, A.42
Edwards, S.V.43
Glenn, T.C.44
Schneider, C.J.45
Losos, J.B.46
Lander, M.B.47
Ponting, C.P.48
Lindblad-Toh, K.49
more..
-
2
-
-
2542542256
-
Ultraconserved elements in the human genome
-
Bejerano G., Pheasant M., Makunin I., Stephen S., Kent W.J., Mattick J.S., Haussler D. Ultraconserved elements in the human genome. Science 2004, 304:1321-1325.
-
(2004)
Science
, vol.304
, pp. 1321-1325
-
-
Bejerano, G.1
Pheasant, M.2
Makunin, I.3
Stephen, S.4
Kent, W.J.5
Mattick, J.S.6
Haussler, D.7
-
3
-
-
84929193081
-
Temperate snake community in South America: is diet determined by phylogeny or ecology?
-
Bellini G.P., Giraudo A.R., Arzamendia V., Etchepare E.G. Temperate snake community in South America: is diet determined by phylogeny or ecology?. PLoS ONE 2015, 10:e0123237.
-
(2015)
PLoS ONE
, vol.10
, pp. e0123237
-
-
Bellini, G.P.1
Giraudo, A.R.2
Arzamendia, V.3
Etchepare, E.G.4
-
4
-
-
84905049901
-
Trimmomatic: a flexible trimmer for Illumina sequence data
-
Bolger A.M., Lohse M., Usadel B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 2014, 30:2114-2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
5
-
-
84921484907
-
Gripping during climbing of arboreal snakes may be safe but not economical
-
Byrnes G., Jayne B.C. Gripping during climbing of arboreal snakes may be safe but not economical. Biol. Lett. 2014, 10:20140434.
-
(2014)
Biol. Lett.
, vol.10
, pp. 20140434
-
-
Byrnes, G.1
Jayne, B.C.2
-
6
-
-
84890812848
-
The Burmese python genome reveals the molecular basis for extreme adaptation in snakes
-
Castoe T.A., de Koning A.P.J., Hall K.T., Card D.C., Schield D.R., Fujita M.K., Ruggiero R.P., Degner J.F., Daza J.M., Gu W., Reyes-Velasco J., Shaney K.J., Castoe J.M., Fox S.E., Poole A.W., Polanco D., Dobry J., Vandewege M.W., Li Q., Schott R., Kapusta A., Minx P., Feschotte C., Uetz P., Ray D.A., Hoffman F.G., Bogden R., Smith E.N., Chang B.S.W., Vonk F., Casewell N.R., Henkel C.V., Richardson M.K., Mackessy S.P., Bronikowski A.M., Yandell M., Warren W.C., Secor S.M., Pollock D.D. The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proc. Natl. Acad. Sci. USA 2013, 110:20645-20650.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 20645-20650
-
-
Castoe, T.A.1
de Koning, A.P.J.2
Hall, K.T.3
Card, D.C.4
Schield, D.R.5
Fujita, M.K.6
Ruggiero, R.P.7
Degner, J.F.8
Daza, J.M.9
Gu, W.10
Reyes-Velasco, J.11
Shaney, K.J.12
Castoe, J.M.13
Fox, S.E.14
Poole, A.W.15
Polanco, D.16
Dobry, J.17
Vandewege, M.W.18
Li, Q.19
Schott, R.20
Kapusta, A.21
Minx, P.22
Feschotte, C.23
Uetz, P.24
Ray, D.A.25
Hoffman, F.G.26
Bogden, R.27
Smith, E.N.28
Chang, B.S.W.29
Vonk, F.30
Casewell, N.R.31
Henkel, C.V.32
Richardson, M.K.33
Mackessy, S.P.34
Bronikowski, A.M.35
Yandell, M.36
Warren, W.C.37
Secor, S.M.38
Pollock, D.D.39
more..
-
8
-
-
84920920957
-
A phylogenomic analysis of turtles
-
Crawford N.G., Parham J.F., Sellas A.B., Faircloth B.C., Glenn T.C., Papenfuss T.J., Henderson J.B., Hansen M.H., Simison W.B. A phylogenomic analysis of turtles. Mol. Phylogenet. Evol. 2015, 83:250-257.
-
(2015)
Mol. Phylogenet. Evol.
, vol.83
, pp. 250-257
-
-
Crawford, N.G.1
Parham, J.F.2
Sellas, A.B.3
Faircloth, B.C.4
Glenn, T.C.5
Papenfuss, T.J.6
Henderson, J.B.7
Hansen, M.H.8
Simison, W.B.9
-
9
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl. Acids Res. 2004, 32:1792-1797.
-
(2004)
Nucl. Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
11
-
-
84960093575
-
PHYLUCE is a software package for the analysis of conserved genomic loci
-
Faircloth B.C. PHYLUCE is a software package for the analysis of conserved genomic loci. Bioinformatics 2016, 32:786-788.
-
(2016)
Bioinformatics
, vol.32
, pp. 786-788
-
-
Faircloth, B.C.1
-
12
-
-
84859548731
-
Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales
-
Faircloth B.C., McCormack J.E., Crawford N.G., Harvey M.G., Brumfield R.T., Glenn T.C. Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales. Syst. Biol. 2012, 61:717-726.
-
(2012)
Syst. Biol.
, vol.61
, pp. 717-726
-
-
Faircloth, B.C.1
McCormack, J.E.2
Crawford, N.G.3
Harvey, M.G.4
Brumfield, R.T.5
Glenn, T.C.6
-
13
-
-
84879162598
-
A phylogenomic perspective on the radiation of ray-finned fishes based upon targeted sequencing of ultraconserved elements (UCEs)
-
Faircloth B.C., Sorenson L., Santini F., Alfaro M.E. A phylogenomic perspective on the radiation of ray-finned fishes based upon targeted sequencing of ultraconserved elements (UCEs). PLoS ONE 2013, 8:e54848.
-
(2013)
PLoS ONE
, vol.8
, pp. e54848
-
-
Faircloth, B.C.1
Sorenson, L.2
Santini, F.3
Alfaro, M.E.4
-
14
-
-
84926468506
-
Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera
-
Faircloth B.C., Branstetter M.G., White N.D., Brady S.G. Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera. Mol. Ecol. Res. 2014, 15:489-501.
-
(2014)
Mol. Ecol. Res.
, vol.15
, pp. 489-501
-
-
Faircloth, B.C.1
Branstetter, M.G.2
White, N.D.3
Brady, S.G.4
-
15
-
-
38449110166
-
Approaching the golden age of natural product pharmaceuticals from venom libraries: an overview of toxins and toxin-derivatives currently involved in therapeutic or diagnostic applications
-
Fox J.W., Serrano S.M.T. Approaching the golden age of natural product pharmaceuticals from venom libraries: an overview of toxins and toxin-derivatives currently involved in therapeutic or diagnostic applications. Curr. Pharm. Des. 2007, 13:2927-2934.
-
(2007)
Curr. Pharm. Des.
, vol.13
, pp. 2927-2934
-
-
Fox, J.W.1
Serrano, S.M.T.2
-
16
-
-
1942533494
-
Assembling an arsenal: origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences
-
Fry B.G., Wüster W. Assembling an arsenal: origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences. Mol. Biol. Evol. 2004, 21:870-883.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 870-883
-
-
Fry, B.G.1
Wüster, W.2
-
17
-
-
72449153475
-
Phylogeny, ecology, and heart position in snakes
-
Gartner G.E.A., Hicks J.W., Manzani P.R., Andrade D.V., Abe A.S., Wang T., Secor S.M., Garland T. Phylogeny, ecology, and heart position in snakes. Physiol. Biochem. Zool. 2009, 83:43-54.
-
(2009)
Physiol. Biochem. Zool.
, vol.83
, pp. 43-54
-
-
Gartner, G.E.A.1
Hicks, J.W.2
Manzani, P.R.3
Andrade, D.V.4
Abe, A.S.5
Wang, T.6
Secor, S.M.7
Garland, T.8
-
18
-
-
28444454462
-
The phylogenetic position of Anomochilidae (Reptilia: Serpentes): first evidence from DNA sequences
-
Gower D.J., Vidal N., Spinks J.N., McCarthy C.J. The phylogenetic position of Anomochilidae (Reptilia: Serpentes): first evidence from DNA sequences. J. Zool. Syst. Evol. Res. 2005, 43:315-320.
-
(2005)
J. Zool. Syst. Evol. Res.
, vol.43
, pp. 315-320
-
-
Gower, D.J.1
Vidal, N.2
Spinks, J.N.3
McCarthy, C.J.4
-
19
-
-
84928358919
-
Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences
-
syu046
-
Huang H., Knowles L.L. Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences. Syst. Biol. 2014, syu046.
-
(2014)
Syst. Biol.
-
-
Huang, H.1
Knowles, L.L.2
-
20
-
-
84929622531
-
The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record
-
Hsiang A.Y., Field D.J., Webster T.H., Behlke A.D.B., Davis M.B., Racicot R.A., Gauthier J.A. The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record. BMC Evol. Biol. 2015, 15:87.
-
(2015)
BMC Evol. Biol.
, vol.15
, pp. 87
-
-
Hsiang, A.Y.1
Field, D.J.2
Webster, T.H.3
Behlke, A.D.B.4
Davis, M.B.5
Racicot, R.A.6
Gauthier, J.A.7
-
21
-
-
84908448749
-
Should genes with missing data be excluded from phylogenetic analyses?
-
Jiang W., Chen S.-Y., Wang H., Li D.-Z., Wiens J.J. Should genes with missing data be excluded from phylogenetic analyses?. Mol. Phylogenet. Evol. 2014, 80:308-318.
-
(2014)
Mol. Phylogenet. Evol.
, vol.80
, pp. 308-318
-
-
Jiang, W.1
Chen, S.-Y.2
Wang, H.3
Li, D.-Z.4
Wiens, J.J.5
-
22
-
-
56749150556
-
The global burden of snakebite: a literature analysis and modelling based on regional estimates of envenoming and deaths
-
Kasturiratne A., Wickremasinghe A.R., de Silva N., Gunawardena N.K., Pathmeswaran A., Premaratna R., Savioli L., Lalloo D.G., de Silva H.J. The global burden of snakebite: a literature analysis and modelling based on regional estimates of envenoming and deaths. PLoS Med. 2008, 5:e218.
-
(2008)
PLoS Med.
, vol.5
, pp. e218
-
-
Kasturiratne, A.1
Wickremasinghe, A.R.2
de Silva, N.3
Gunawardena, N.K.4
Pathmeswaran, A.5
Premaratna, R.6
Savioli, L.7
Lalloo, D.G.8
de Silva, H.J.9
-
23
-
-
84909979108
-
When do species tree and concatenated estimates disagree? An empirical analysis with higher-level scincid lizard phylogeny
-
Lambert S.M., Reeder T.W., Wiens J.J. When do species tree and concatenated estimates disagree? An empirical analysis with higher-level scincid lizard phylogeny. Mol. Phylogenet. Evol. 2015, 82:146-155.
-
(2015)
Mol. Phylogenet. Evol.
, vol.82
, pp. 146-155
-
-
Lambert, S.M.1
Reeder, T.W.2
Wiens, J.J.3
-
24
-
-
3142611436
-
A molecular approach to discerning the phylogenetic placement of the enigmatic snake Xenophidion schaeferi among the Alethinophidia
-
Lawson R., Slowinski J.B., Burbrink F.T. A molecular approach to discerning the phylogenetic placement of the enigmatic snake Xenophidion schaeferi among the Alethinophidia. J. Zool. 2004, 263:285-294.
-
(2004)
J. Zool.
, vol.263
, pp. 285-294
-
-
Lawson, R.1
Slowinski, J.B.2
Burbrink, F.T.3
-
25
-
-
79951561454
-
The accuracy of species tree estimation under simulation: a comparison of methods
-
Leaché A.D., Rannala B. The accuracy of species tree estimation under simulation: a comparison of methods. Syst. Biol. 2011, 60:126-137.
-
(2011)
Syst. Biol.
, vol.60
, pp. 126-137
-
-
Leaché, A.D.1
Rannala, B.2
-
26
-
-
84904370094
-
A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification
-
Leaché A.D., Wagner P., Linkem C.W., Böhme W., Papenfuss T.J., Chong R.A., Lavin B.R., Bauer A.M., Nielsen S.V., Greenbaum E., Rödel M.-O., Schmitz A., LeBreton M., Ineich I., Chirio L., Ofori-Boateng C., Eniang E.A., Baha El Din S., Lemmon A.R., Burbrink F.T. A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification. Mol. Phylogenet. Evol. 2014, 79:215-230.
-
(2014)
Mol. Phylogenet. Evol.
, vol.79
, pp. 215-230
-
-
Leaché, A.D.1
Wagner, P.2
Linkem, C.W.3
Böhme, W.4
Papenfuss, T.J.5
Chong, R.A.6
Lavin, B.R.7
Bauer, A.M.8
Nielsen, S.V.9
Greenbaum, E.10
Rödel, M.-O.11
Schmitz, A.12
LeBreton, M.13
Ineich, I.14
Chirio, L.15
Ofori-Boateng, C.16
Eniang, E.A.17
Baha El Din, S.18
Lemmon, A.R.19
Burbrink, F.T.20
more..
-
27
-
-
84936771254
-
Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing
-
Leaché A.D., Chavez A.S., Jones L.N., Grummer J.A., Gottscho A.D., Linkem C.W. Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing. Genome Biol. Evol. 2015, 7:706-719.
-
(2015)
Genome Biol. Evol.
, vol.7
, pp. 706-719
-
-
Leaché, A.D.1
Chavez, A.S.2
Jones, L.N.3
Grummer, J.A.4
Gottscho, A.D.5
Linkem, C.W.6
-
28
-
-
80051975928
-
Estimating species trees from unrooted gene trees
-
Liu L., Yu L. Estimating species trees from unrooted gene trees. Syst. Biol. 2011, 60:661-667.
-
(2011)
Syst. Biol.
, vol.60
, pp. 661-667
-
-
Liu, L.1
Yu, L.2
-
29
-
-
84876805079
-
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
-
Pyron R.A., Burbrink F.T., Wiens J.J. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes. BMC Evol. Biol. 2013, 13:93.
-
(2013)
BMC Evol. Biol.
, vol.13
, pp. 93
-
-
Pyron, R.A.1
Burbrink, F.T.2
Wiens, J.J.3
-
30
-
-
84908603912
-
Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia)
-
Pyron R.A., Hendry C.R., Chou V.M., Lemmon E.M., Lemmon A.R., Burbrink F.T. Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia). Mol. Phylogenet. Evol. 2014, 81:221-231.
-
(2014)
Mol. Phylogenet. Evol.
, vol.81
, pp. 221-231
-
-
Pyron, R.A.1
Hendry, C.R.2
Chou, V.M.3
Lemmon, E.M.4
Lemmon, A.R.5
Burbrink, F.T.6
-
31
-
-
84925424118
-
Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa
-
Reeder T.W., Townsend T.M., Mulcahy D.G., Noonan B.P., Wood P.L., Sites J.W., Wiens J.J. Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa. PLoS ONE 2015, 10:e0118199.
-
(2015)
PLoS ONE
, vol.10
, pp. e0118199
-
-
Reeder, T.W.1
Townsend, T.M.2
Mulcahy, D.G.3
Noonan, B.P.4
Wood, P.L.5
Sites, J.W.6
Wiens, J.J.7
-
32
-
-
84860595791
-
Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
-
Rohland N., Reich D. Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture. Genome Res. 2012, 22:939-946.
-
(2012)
Genome Res.
, vol.22
, pp. 939-946
-
-
Rohland, N.1
Reich, D.2
-
33
-
-
22144473057
-
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes
-
Sandelin A., Bailey P., Bruce S., Engström P.G., Klos J.M., Wasserman W.W., Ericson J., Lenhard B. Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes. BMC Genom. 2004, 5:99.
-
(2004)
BMC Genom.
, vol.5
, pp. 99
-
-
Sandelin, A.1
Bailey, P.2
Bruce, S.3
Engström, P.G.4
Klos, J.M.5
Wasserman, W.W.6
Ericson, J.7
Lenhard, B.8
-
34
-
-
84907459397
-
Phylogeny of courtship and male-male combat behavior in snakes
-
Senter P., Harris S.M., Kent D.L. Phylogeny of courtship and male-male combat behavior in snakes. PLoS ONE 2014, 9:e107528.
-
(2014)
PLoS ONE
, vol.9
, pp. e107528
-
-
Senter, P.1
Harris, S.M.2
Kent, D.L.3
-
35
-
-
50949129519
-
Calculating bootstrap probabilities of phylogeny using multilocus sequence data
-
Seo T.K. Calculating bootstrap probabilities of phylogeny using multilocus sequence data. Mol. Biol. Evol. 2008, 25:960-971.
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 960-971
-
-
Seo, T.K.1
-
36
-
-
84883591070
-
STRAW: Species TRee Analysis Web Server
-
Shaw T., Ruan Z., Glenn T., Liu L. STRAW: Species TRee Analysis Web Server. Nucleic Acids Res. 2013, 41:W230-W241.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. W230-W241
-
-
Shaw, T.1
Ruan, Z.2
Glenn, T.3
Liu, L.4
-
37
-
-
84899553363
-
RAxML Version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
-
Stamatakis A. RAxML Version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 2014, 30:1312-1315.
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1315
-
-
Stamatakis, A.1
-
38
-
-
84960362109
-
How should genes and taxa be sampled for phylogenomic analyses with missing data? An empirical study in iguanian lizards
-
Streicher J.W., Schulte J.A., Wiens J.J. How should genes and taxa be sampled for phylogenomic analyses with missing data? An empirical study in iguanian lizards. Syst. Biol. 2016, 65:128-145.
-
(2016)
Syst. Biol.
, vol.65
, pp. 128-145
-
-
Streicher, J.W.1
Schulte, J.A.2
Wiens, J.J.3
-
39
-
-
85003055879
-
The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach
-
Sun K., Meiklejohn K.A., Faircloth B.C., Glenn T.C., Braun E.L., Kimball R.T. The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach. Proc. R. Soc. Lond. B Biol. Sci. 2014, 281:20140.
-
(2014)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.281
, pp. 20140
-
-
Sun, K.1
Meiklejohn, K.A.2
Faircloth, B.C.3
Glenn, T.C.4
Braun, E.L.5
Kimball, R.T.6
-
40
-
-
9644269182
-
Molecular phylogenetics of Squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree
-
Townsend T., Larson A., Louis E.J., Macey J.R. Molecular phylogenetics of Squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree. Syst. Biol. 2004, 53:735-757.
-
(2004)
Syst. Biol.
, vol.53
, pp. 735-757
-
-
Townsend, T.1
Larson, A.2
Louis, E.J.3
Macey, J.R.4
-
42
-
-
40949150808
-
Origin of tropical American burrowing reptiles by transatlantic rafting
-
Vidal N., Azvolinsky A., Cruaud C., Hedges S.B. Origin of tropical American burrowing reptiles by transatlantic rafting. Biol. Lett. 2007, 4:115-118.
-
(2007)
Biol. Lett.
, vol.4
, pp. 115-118
-
-
Vidal, N.1
Azvolinsky, A.2
Cruaud, C.3
Hedges, S.B.4
-
43
-
-
28044466648
-
The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes
-
Vidal N., Hedges S.B. The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes. C. R. Biol. 2005, 328:1000-1008.
-
(2005)
C. R. Biol.
, vol.328
, pp. 1000-1008
-
-
Vidal, N.1
Hedges, S.B.2
-
44
-
-
84890842764
-
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
-
Vonk F.J., Casewell N.R., Henkel C.V., Heimberg A., Jansen H.J., McCleary R.J.R., Kerkkamp H.M.E., Vos R., Guerreiro I., Calvete J.J., Wüster W., Woods A.E., Logan J.M., Harrison R.A., Castoe T.A., de Koning A.P.J., Pollock D.D., Renjifo C., Currier R.B., Salgado D., Pla D., Sanz L., Hyder A.S., Ribeiro J.M.C., Arntzen J.W., van den Thillart G.E.E.J.M., Boetzer M., Pirovano W., Dirks R.P., Spaink H.P., Duboule D., McGlinn E., Kini R.M., Richardson M.K. The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system. Proc. Natl. Acad. Sci. USA 2013, 10:20651-20656.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.10
, pp. 20651-20656
-
-
Vonk, F.J.1
Casewell, N.R.2
Henkel, C.V.3
Heimberg, A.4
Jansen, H.J.5
McCleary, R.J.R.6
Kerkkamp, H.M.E.7
Vos, R.8
Guerreiro, I.9
Calvete, J.J.10
Wüster, W.11
Woods, A.E.12
Logan, J.M.13
Harrison, R.A.14
Castoe, T.A.15
de Koning, A.P.J.16
Pollock, D.D.17
Renjifo, C.18
Currier, R.B.19
Salgado, D.20
Pla, D.21
Sanz, L.22
Hyder, A.S.23
Ribeiro, J.M.C.24
Arntzen, J.W.25
van den Thillart, G.E.E.J.M.26
Boetzer, M.27
Pirovano, W.28
Dirks, R.P.29
Spaink, H.P.30
Duboule, D.31
McGlinn, E.32
Kini, R.M.33
Richardson, M.K.34
more..
-
45
-
-
84872480881
-
Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation
-
Wagner C.E., Keller I., Wittwer S., Selz O.M., Mwaiko S., Greuter L., Sivasundar A., Seehausen O. Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation. Mol. Ecol. 2013, 22:787-798.
-
(2013)
Mol. Ecol.
, vol.22
, pp. 787-798
-
-
Wagner, C.E.1
Keller, I.2
Wittwer, S.3
Selz, O.M.4
Mwaiko, S.5
Greuter, L.6
Sivasundar, A.7
Seehausen, O.8
-
46
-
-
80052006478
-
Missing data in phylogenetic analysis: reconciling results from simulations and empirical data
-
Wiens J.J., Morrill M.C. Missing data in phylogenetic analysis: reconciling results from simulations and empirical data. Syst. Biol. 2011, 60:719-731.
-
(2011)
Syst. Biol.
, vol.60
, pp. 719-731
-
-
Wiens, J.J.1
Morrill, M.C.2
-
47
-
-
84865026977
-
Highly incomplete taxa can rescue phylogenetic analyses from the negative impacts of limited taxon sampling
-
Wiens J.J., Tiu J. Highly incomplete taxa can rescue phylogenetic analyses from the negative impacts of limited taxon sampling. PLoS ONE 2012, 7:42925.
-
(2012)
PLoS ONE
, vol.7
, pp. 42925
-
-
Wiens, J.J.1
Tiu, J.2
-
48
-
-
43749109878
-
Branch length, support, and congruence: testing the phylogenomic approach with 20 nuclear loci in snakes
-
Wiens J.J., Kuczynski C.A., Smith S.A., Mulcahy D., Sites J.W., Townsend T.M., Reeder T.W. Branch length, support, and congruence: testing the phylogenomic approach with 20 nuclear loci in snakes. Syst. Biol. 2008, 57:420-431.
-
(2008)
Syst. Biol.
, vol.57
, pp. 420-431
-
-
Wiens, J.J.1
Kuczynski, C.A.2
Smith, S.A.3
Mulcahy, D.4
Sites, J.W.5
Townsend, T.M.6
Reeder, T.W.7
-
49
-
-
78651454774
-
Combining phylogenomics and fossils in higher-level squamate reptile phylogeny: molecular data change the placement of fossil taxa
-
Wiens J.J., Kuczynski C.A., Townsend T., Reeder T.W., Mulcahy D.G., Sites J.W. Combining phylogenomics and fossils in higher-level squamate reptile phylogeny: molecular data change the placement of fossil taxa. Syst. Biol. 2010, 59:674-688.
-
(2010)
Syst. Biol.
, vol.59
, pp. 674-688
-
-
Wiens, J.J.1
Kuczynski, C.A.2
Townsend, T.3
Reeder, T.W.4
Mulcahy, D.G.5
Sites, J.W.6
-
50
-
-
84869787270
-
Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species
-
Wiens J.J., Hutter C.R., Mulcahy D.G., Noonan B.P., Townsend T.M., Sites J.W., Reeder T.W. Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species. Biol. Lett. 2012, 8:1043-1046.
-
(2012)
Biol. Lett.
, vol.8
, pp. 1043-1046
-
-
Wiens, J.J.1
Hutter, C.R.2
Mulcahy, D.G.3
Noonan, B.P.4
Townsend, T.M.5
Sites, J.W.6
Reeder, T.W.7
-
51
-
-
0030451420
-
Among-site rate variation and its impact on phylogenetic analysis
-
Yang Z. Among-site rate variation and its impact on phylogenetic analysis. Trends Ecol. Evol. 1996, 11:367-372.
-
(1996)
Trends Ecol. Evol.
, vol.11
, pp. 367-372
-
-
Yang, Z.1
-
52
-
-
43149115851
-
Velvet: algorithms for de novo short read assemble using de Bruijn graphs
-
Zerbino D.R., Birney E. Velvet: algorithms for de novo short read assemble using de Bruijn graphs. Genome Res. 2008, 18:821-829.
-
(2008)
Genome Res.
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
53
-
-
84949033709
-
Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 species
-
Zheng Y., Wiens J.J. Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 species. Mol. Phylogenet. Evol. 2016, 94:537-557.
-
(2016)
Mol. Phylogenet. Evol.
, vol.94
, pp. 537-557
-
-
Zheng, Y.1
Wiens, J.J.2
|