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Volumn 16, Issue 1, 2016, Pages

The plasmid-mediated evolution of the mycobacterial ESX (Type VII) secretion systems

Author keywords

ESAT 6; ESX; Evolution; Mycobacterium; Plasmid; Type VII secretion system

Indexed keywords

BACTERIUM; EVOLUTION; GENE FLOW; GENOMICS; PHYLOGENETICS; PLASMID; PROTEIN; SECRETION; SENSORY SYSTEM; SPECIES DIVERSITY; TUBERCULOSIS; VIRULENCE;

EID: 84961205555     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/s12862-016-0631-2     Document Type: Article
Times cited : (59)

References (50)
  • 2
    • 0035231423 scopus 로고    scopus 로고
    • The ESAT-6 gene cluster of Mycobacterium tuberculosis and other high G+C Gram-positive bacteria
    • 1:CAS:528:DC%2BD38XitFWjsLY%3D 11597336 57799 RESEARCH0044
    • Gey Van Pittius NC, Gamieldien J, Hide W, Brown GD, Siezen RJ, Beyers AD. The ESAT-6 gene cluster of Mycobacterium tuberculosis and other high G+C Gram-positive bacteria. Genome Biol. 2001;2:RESEARCH0044.
    • (2001) Genome Biol , vol.2
    • Gey Van Pittius, N.C.1    Gamieldien, J.2    Hide, W.3    Brown, G.D.4    Siezen, R.J.5    Beyers, A.D.6
  • 3
    • 0029920827 scopus 로고    scopus 로고
    • Molecular analysis of genetic differences between Mycobacterium bovis BCG and virulent M. bovis
    • 1:CAS:528:DyaK28XhsVSqur4%3D 8631702 177799
    • Mahairas GG, Sabo PJ, Hickey MJ, Singh DC, Stover CK. Molecular analysis of genetic differences between Mycobacterium bovis BCG and virulent M. bovis. J Bacteriol. 1996;178:1274-82.
    • (1996) J Bacteriol , vol.178 , pp. 1274-1282
    • Mahairas, G.G.1    Sabo, P.J.2    Hickey, M.J.3    Singh, D.C.4    Stover, C.K.5
  • 5
    • 0001633794 scopus 로고    scopus 로고
    • Comparative genomics uncovers large tandem chromosomal duplications in Mycobacterium bovis BCG Pasteur
    • 1:CAS:528:DC%2BD3cXlsVygurg%3D 10900457 2448323
    • Brosch R, Gordon SV, Buchrieser C, Pym AS, Garnier T, Cole ST. Comparative genomics uncovers large tandem chromosomal duplications in Mycobacterium bovis BCG Pasteur. Yeast. 2000;17:111-23.
    • (2000) Yeast , vol.17 , pp. 111-123
    • Brosch, R.1    Gordon, S.V.2    Buchrieser, C.3    Pym, A.S.4    Garnier, T.5    Cole, S.T.6
  • 11
    • 34249870368 scopus 로고    scopus 로고
    • A genetic screen for Mycobacterium tuberculosis mutants defective for phagosome maturation arrest identifies components of the ESX-1 secretion system
    • 1:CAS:528:DC%2BD2sXmtlKnu7g%3D 17353284 1932882
    • MacGurn JA, Cox JS. A genetic screen for Mycobacterium tuberculosis mutants defective for phagosome maturation arrest identifies components of the ESX-1 secretion system. Infect Immun. 2007;75:2668-78.
    • (2007) Infect Immun , vol.75 , pp. 2668-2678
    • MacGurn, J.A.1    Cox, J.S.2
  • 12
    • 72049083462 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis ESX-1 system-secreted protein ESAT-6 but not CFP10 inhibits human T-cell immune responses
    • Samten B, Wang X, Barnes PF. Mycobacterium tuberculosis ESX-1 system-secreted protein ESAT-6 but not CFP10 inhibits human T-cell immune responses. Tuberculosis (Edinb). 2009;89 Suppl 1:S74-6.
    • (2009) Tuberculosis (Edinb) , vol.89 , pp. S74-S76
    • Samten, B.1    Wang, X.2    Barnes, P.F.3
  • 20
    • 0345701347 scopus 로고    scopus 로고
    • Genes required for mycobacterial growth defined by high density mutagenesis
    • 1:CAS:528:DC%2BD3sXislOrsLY%3D 12657046
    • Sassetti CM, Boyd DH, Rubin EJ. Genes required for mycobacterial growth defined by high density mutagenesis. Mol Microbiol. 2003;48:77-84.
    • (2003) Mol Microbiol , vol.48 , pp. 77-84
    • Sassetti, C.M.1    Boyd, D.H.2    Rubin, E.J.3
  • 21
    • 70350445687 scopus 로고    scopus 로고
    • Characterization of a Mycobacterium tuberculosis ESX-3 conditional mutant: Essentiality and rescue by iron and zinc
    • 1:CAS:528:DC%2BD1MXhsVSrsrvL 19684129 2753049
    • Serafini A, Boldrin F, Palu G, Manganelli R. Characterization of a Mycobacterium tuberculosis ESX-3 conditional mutant: essentiality and rescue by iron and zinc. J Bacteriol. 2009;191:6340-4.
    • (2009) J Bacteriol , vol.191 , pp. 6340-6344
    • Serafini, A.1    Boldrin, F.2    Palu, G.3    Manganelli, R.4
  • 23
    • 0036081140 scopus 로고    scopus 로고
    • IdeR, An essential gene in Mycobacterium tuberculosis: Role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response
    • 1:CAS:528:DC%2BD38XkvV2ltbg%3D 12065475 128082
    • Rodriguez GM, Voskuil MI, Gold B, Schoolnik GK, Smith I. ideR, An essential gene in Mycobacterium tuberculosis: role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response. Infect Immun. 2002;70:3371-81.
    • (2002) Infect Immun , vol.70 , pp. 3371-3381
    • Rodriguez, G.M.1    Voskuil, M.I.2    Gold, B.3    Schoolnik, G.K.4    Smith, I.5
  • 25
    • 4344596222 scopus 로고    scopus 로고
    • The RD1 virulence locus of Mycobacterium tuberculosis regulates DNA transfer in Mycobacterium smegmatis
    • 1:CAS:528:DC%2BD2cXnsVensbc%3D 15314236 515103
    • Flint JL, Kowalski JC, Karnati PK, Derbyshire KM. The RD1 virulence locus of Mycobacterium tuberculosis regulates DNA transfer in Mycobacterium smegmatis. Proc Natl Acad Sci U S A. 2004;101:12598-603.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 12598-12603
    • Flint, J.L.1    Kowalski, J.C.2    Karnati, P.K.3    Derbyshire, K.M.4
  • 26
    • 47749109112 scopus 로고    scopus 로고
    • The specialized secretory apparatus ESX-1 is essential for DNA transfer in Mycobacterium smegmatis
    • 1:CAS:528:DC%2BD1cXhtVehurzJ 18554329 2562793
    • Coros A, Callahan B, Battaglioli E, Derbyshire KM. The specialized secretory apparatus ESX-1 is essential for DNA transfer in Mycobacterium smegmatis. Mol Microbiol. 2008;69:794-808.
    • (2008) Mol Microbiol , vol.69 , pp. 794-808
    • Coros, A.1    Callahan, B.2    Battaglioli, E.3    Derbyshire, K.M.4
  • 27
    • 63049134798 scopus 로고    scopus 로고
    • Transcriptional analysis of ESAT-6 cluster 3 in Mycobacterium smegmatis
    • 19257911 2660348
    • Maciag A, Piazza A, Riccardi G, Milano A. Transcriptional analysis of ESAT-6 cluster 3 in Mycobacterium smegmatis. BMC Microbiol. 2009;9:48.
    • (2009) BMC Microbiol , vol.9 , pp. 48
    • Maciag, A.1    Piazza, A.2    Riccardi, G.3    Milano, A.4
  • 29
    • 14544279302 scopus 로고    scopus 로고
    • A protein secretion pathway critical for Mycobacterium tuberculosis virulence is conserved and functional in Mycobacterium smegmatis
    • 1:CAS:528:DC%2BD2MXhs1Kks70%3D 15687187 545616
    • Converse SE, Cox JS. A protein secretion pathway critical for Mycobacterium tuberculosis virulence is conserved and functional in Mycobacterium smegmatis. J Bacteriol. 2005;187:1238-45.
    • (2005) J Bacteriol , vol.187 , pp. 1238-1245
    • Converse, S.E.1    Cox, J.S.2
  • 30
    • 0036568776 scopus 로고    scopus 로고
    • The ESAT-6/WXG100 superfamily - And a new Gram-positive secretion system?
    • 1:CAS:528:DC%2BD38XjsFGntrc%3D 11973144
    • Pallen MJ. The ESAT-6/WXG100 superfamily - and a new Gram-positive secretion system? Trends Microbiol. 2002;10:209-12.
    • (2002) Trends Microbiol , vol.10 , pp. 209-212
    • Pallen, M.J.1
  • 31
    • 79952446159 scopus 로고    scopus 로고
    • New insights into the distribution of WXG100 protein secretion systems
    • 1:CAS:528:DC%2BC3MXhsFWgsL0%3D 20852931
    • Sutcliffe IC. New insights into the distribution of WXG100 protein secretion systems. Antonie Van Leeuwenhoek. 2011;99:127-31.
    • (2011) Antonie Van Leeuwenhoek , vol.99 , pp. 127-131
    • Sutcliffe, I.C.1
  • 32
    • 68749097113 scopus 로고    scopus 로고
    • Outer membrane translocation: Numerical protein secretion nomenclature in question in mycobacteria
    • 1:CAS:528:DC%2BD1MXhtVehtbnI 19674902
    • Desvaux M, Hebraud M, Talon R, Henderson IR. Outer membrane translocation: numerical protein secretion nomenclature in question in mycobacteria. Trends Microbiol. 2009;17:338-40.
    • (2009) Trends Microbiol , vol.17 , pp. 338-340
    • Desvaux, M.1    Hebraud, M.2    Talon, R.3    Henderson, I.R.4
  • 37
    • 33751323180 scopus 로고    scopus 로고
    • Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions
    • van Pittius NC G, Sampson SL, Lee H, Kim Y, van Helden PD, Warren RM. Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions. BMC Evol Biol. 2006;6:95.
    • (2006) BMC Evol Biol , vol.6 , pp. 95
    • Van Pittius Nc, G.1    Sampson, S.L.2    Lee, H.3    Kim, Y.4    Van Helden, P.D.5    Warren, R.M.6
  • 40
    • 0036786509 scopus 로고    scopus 로고
    • Bacterial artificial chromosome-based comparative genomic analysis identifies Mycobacterium microti as a natural ESAT-6 deletion mutant
    • Brodin P, Eiglmeier K, Marmiesse M, Billault A, Garnier T, Niemann S, Cole ST, Brosch R. Bacterial artificial chromosome-based comparative genomic analysis identifies Mycobacterium microti as a natural ESAT-6 deletion mutant. Infect Immun. 2002;70:5568-78.
    • (2002) Infect Immun , vol.70 , pp. 5568-5578
    • Brodin, P.1    Eiglmeier, K.2    Marmiesse, M.3    Billault, A.4    Garnier, T.5    Niemann, S.6    Cole, S.T.7    Brosch, R.8
  • 41
    • 0032949025 scopus 로고    scopus 로고
    • Identification of variable regions in the genomes of tubercle bacilli using bacterial artificial chromosome arrays
    • 1:CAS:528:DyaK1MXjs1emtrw%3D 10320585
    • Gordon SV, Brosch R, Billault A, Garnier T, Eiglmeier K, Cole ST. Identification of variable regions in the genomes of tubercle bacilli using bacterial artificial chromosome arrays. Mol Microbiol. 1999;32:643-55.
    • (1999) Mol Microbiol , vol.32 , pp. 643-655
    • Gordon, S.V.1    Brosch, R.2    Billault, A.3    Garnier, T.4    Eiglmeier, K.5    Cole, S.T.6
  • 43
    • 0027399530 scopus 로고
    • Identification of protein coding regions by database similarity search
    • 1:CAS:528:DyaK3sXhvVCmsb4%3D 8485583
    • Gish W, States DJ. Identification of protein coding regions by database similarity search. Nat Genet. 1993;3:266-72.
    • (1993) Nat Genet , vol.3 , pp. 266-272
    • Gish, W.1    States, D.J.2
  • 44
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • 1:CAS:528:DyaK2MXitlSgu74%3D 7984417 308517
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994;22:4673-80.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 46
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • 1:CAS:528:DC%2BD3cXhtVyjs7Y%3D
    • Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser. 1999;41:95-8.
    • (1999) Nucl Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 47
    • 74549125386 scopus 로고    scopus 로고
    • SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
    • 1:CAS:528:DC%2BC3cXntlGgtw%3D%3D 19854763
    • Gouy M, Guindon S, Gascuel O. SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol. 2010;27:221-4.
    • (2010) Mol Biol Evol , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 49
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • 1:CAS:528:DyaK38Xlt1Okt7w%3D 1633570
    • Jones DT, Taylor WR, Thornton JM. The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci. 1992;8:275-82.
    • (1992) Comput Appl Biosci , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 50
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: Multiple alignment of conserved genomic sequence with rearrangements
    • 1:CAS:528:DC%2BD2cXlvFWjtb8%3D 15231754 442156
    • Darling ACE, Mau B, Blattner FR, Perna NT. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 2004;14:1394-403.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.E.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.