-
1
-
-
84860797993
-
Snapshot of virus evolution in hypersaline environments from the characterization of a membrane-containing Salisaeta icosahedral phage 1
-
Aalto, A.P., Bitto, D., Ravantti, J.J., Bamford, D.H., Huiskonen, J.T., and Oksanen, H.M. (2012) Snapshot of virus evolution in hypersaline environments from the characterization of a membrane-containing Salisaeta icosahedral phage 1. Proc Natl Acad Sci USA 109: 7079-7084.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 7079-7084
-
-
Aalto, A.P.1
Bitto, D.2
Ravantti, J.J.3
Bamford, D.H.4
Huiskonen, J.T.5
Oksanen, H.M.6
-
2
-
-
33751059692
-
The marine viromes of four oceanic regions
-
Angly, F.E., Felts, B., Breitbart, M., Salamon, P., Edwards, R.A., Carlson, C., etal. (2006) The marine viromes of four oceanic regions. PLoS Biol 4: e368.
-
(2006)
PLoS Biol
, vol.4
, pp. e368
-
-
Angly, F.E.1
Felts, B.2
Breitbart, M.3
Salamon, P.4
Edwards, R.A.5
Carlson, C.6
-
3
-
-
84856573429
-
Global network of specific virus-host interactions in hypersaline environments
-
Atanasova, N.S., Roine, E., Oren, A., Bamford, D.H., and Oksanen, H.M. (2012) Global network of specific virus-host interactions in hypersaline environments. Environ Microbiol 14: 426-440.
-
(2012)
Environ Microbiol
, vol.14
, pp. 426-440
-
-
Atanasova, N.S.1
Roine, E.2
Oren, A.3
Bamford, D.H.4
Oksanen, H.M.5
-
4
-
-
0031680647
-
His1, an archaeal virus of the Fuselloviridae family that infects Haloarcula hispanica
-
Bath, C., and Dyall-Smith, M.L. (1998) His1, an archaeal virus of the Fuselloviridae family that infects Haloarcula hispanica. J Virol 72: 9392-9395.
-
(1998)
J Virol
, vol.72
, pp. 9392-9395
-
-
Bath, C.1
Dyall-Smith, M.L.2
-
5
-
-
33744929889
-
His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, Salterprovirus
-
Bath, C., Cukalac, T., Porter, K., and Dyall-Smith, M.L. (2006) His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, Salterprovirus. Virology 350: 228-239.
-
(2006)
Virology
, vol.350
, pp. 228-239
-
-
Bath, C.1
Cukalac, T.2
Porter, K.3
Dyall-Smith, M.L.4
-
6
-
-
84857863711
-
Haloviruses of great salt lake: a model for understanding viral diversity
-
Ventosa, A., Oren, A., and Ma, Y. (eds). Berlin, Heidelberg, Germany: Springer Berlin Heidelberg
-
Baxter, B.K., Mangalea, M.R., Willcox, S., Sabet, S., Nagoulat, M.N., and Griffith, J.D. (2011) Haloviruses of great salt lake: a model for understanding viral diversity. In Halophiles and Hypersaline Environments. Ventosa, A., Oren, A., and Ma, Y. (eds). Berlin, Heidelberg, Germany: Springer Berlin Heidelberg, pp. 173-190.
-
(2011)
Halophiles and Hypersaline Environments
, pp. 173-190
-
-
Baxter, B.K.1
Mangalea, M.R.2
Willcox, S.3
Sabet, S.4
Nagoulat, M.N.5
Griffith, J.D.6
-
7
-
-
0035984127
-
Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern
-
Benlloch, S., López-López, A., Casamayor, E.O., Øvreås, L., Goddard, V., Daae, F.L., etal. (2002) Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern. Environ Microbiol 4: 349-360.
-
(2002)
Environ Microbiol
, vol.4
, pp. 349-360
-
-
Benlloch, S.1
López-López, A.2
Casamayor, E.O.3
Øvreås, L.4
Goddard, V.5
Daae, F.L.6
-
8
-
-
79953798127
-
Ecological traits of planktonic viruses and prokaryotes along a full-salinity gradient
-
Bettarel, Y., Bouvier, T., Bouvier, C., Carré, C., Desnues, A., Domaizon, I., etal. (2011) Ecological traits of planktonic viruses and prokaryotes along a full-salinity gradient. FEMS Microbiol Ecol 76: 360-372.
-
(2011)
FEMS Microbiol Ecol
, vol.76
, pp. 360-372
-
-
Bettarel, Y.1
Bouvier, T.2
Bouvier, C.3
Carré, C.4
Desnues, A.5
Domaizon, I.6
-
9
-
-
10044226982
-
Isolation and cultivation of Walsby's square archaeon
-
Bolhuis, H., Poele, E.M., and Rodriguez-Valera, F. (2004) Isolation and cultivation of Walsby's square archaeon. Environ Microbiol 6: 1287-1291.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1287-1291
-
-
Bolhuis, H.1
Poele, E.M.2
Rodriguez-Valera, F.3
-
10
-
-
84868352655
-
Virioplankton community structure in Tunisian solar salterns
-
Boujelben, I., Yarza, P., Almansa, C., Villamor, J., Maalej, S., Antón, J., and Santos, F. (2012) Virioplankton community structure in Tunisian solar salterns. Appl Environ Microbiol 78: 7429-7437.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 7429-7437
-
-
Boujelben, I.1
Yarza, P.2
Almansa, C.3
Villamor, J.4
Maalej, S.5
Antón, J.6
Santos, F.7
-
11
-
-
84929998256
-
Global patterns and ecological drivers of ocean viral communities
-
1261498-1-10.
-
Brum, J.R., Ignacio-espinoza, J.C., Roux, S., Doulcier, G., Acinas, S.G., Alberti, A., etal. (2015) Global patterns and ecological drivers of ocean viral communities. Science 348: 1261498-1-10.
-
(2015)
Science
, vol.348
-
-
Brum, J.R.1
Ignacio-espinoza, J.C.2
Roux, S.3
Doulcier, G.4
Acinas, S.G.5
Alberti, A.6
-
12
-
-
1642386112
-
Optimization of procedures for counting viruses by flow cytometry
-
Brussaard, C.P. (2004) Optimization of procedures for counting viruses by flow cytometry. Appl Environ Microbiol 70: 1506-1513.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1506-1513
-
-
Brussaard, C.P.1
-
13
-
-
0035984122
-
Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern
-
Casamayor, E.O., Massana, R., Benlloch, S., Øvreås, L., Díez, B., Goddard, V.J., etal. (2002) Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern. Environ Microbiol 4: 338-348.
-
(2002)
Environ Microbiol
, vol.4
, pp. 338-348
-
-
Casamayor, E.O.1
Massana, R.2
Benlloch, S.3
Øvreås, L.4
Díez, B.5
Goddard, V.J.6
-
14
-
-
36448938373
-
Virioplankton 'pegylation': use of PEG (polyethylene glycol) to concentrate and purify viruses in pelagic ecosystems
-
Colombet, J., Robin, A., Lavie, L., Bettarel, Y., Cauchie, H.M., and Sime-Ngando, T. (2007) Virioplankton 'pegylation': use of PEG (polyethylene glycol) to concentrate and purify viruses in pelagic ecosystems. J Microbiol Methods 71: 212-219.
-
(2007)
J Microbiol Methods
, vol.71
, pp. 212-219
-
-
Colombet, J.1
Robin, A.2
Lavie, L.3
Bettarel, Y.4
Cauchie, H.M.5
Sime-Ngando, T.6
-
15
-
-
13244255415
-
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
-
Edgar, R.C. (2004) MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
16
-
-
84866154398
-
Metagenomic assembly reveals dynamic viral populations in hypersaline systems
-
Emerson, J.B., Thomas, B.C., Andrade, K., Allen, E.E., Heidelberg, K.B., and Banfield, J.F. (2012) Metagenomic assembly reveals dynamic viral populations in hypersaline systems. Appl Environ Microbiol 78: 6309-6320.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 6309-6320
-
-
Emerson, J.B.1
Thomas, B.C.2
Andrade, K.3
Allen, E.E.4
Heidelberg, K.B.5
Banfield, J.F.6
-
17
-
-
84859149175
-
Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses
-
Garcia-Heredia, I., Martin-Cuadrado, A.B., Mojica, F.J., Santos, F., Mira, A., Antón, J., and Rodriguez-Valera, F. (2012) Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses. PLoS ONE 7: e33802.
-
(2012)
PLoS ONE
, vol.7
, pp. e33802
-
-
Garcia-Heredia, I.1
Martin-Cuadrado, A.B.2
Mojica, F.J.3
Santos, F.4
Mira, A.5
Antón, J.6
Rodriguez-Valera, F.7
-
18
-
-
84860825761
-
Closely related archaeal Haloarcula hispanica icosahedral viruses HHIV-2 and SH1 have nonhomologous genes encoding host recognition functions
-
Jaakkola, S.T., Penttinen, R.K., Vilén, S.T., Jalasvuori, M., Rönnholm, G., Bamford, J.K., etal. (2012) Closely related archaeal Haloarcula hispanica icosahedral viruses HHIV-2 and SH1 have nonhomologous genes encoding host recognition functions. J Virol 86: 4734-4742.
-
(2012)
J Virol
, vol.86
, pp. 4734-4742
-
-
Jaakkola, S.T.1
Penttinen, R.K.2
Vilén, S.T.3
Jalasvuori, M.4
Rönnholm, G.5
Bamford, J.K.6
-
19
-
-
0036360431
-
Natrialba magadii virus PhiCh1: first complete nucleotide sequence and functional organization of a virus infecting a haloalkaliphilic archaeon
-
Klein, R., Baranyi, U., Greineder, B., Scholz, H., and Witte, A. (2002) Natrialba magadii virus PhiCh1: first complete nucleotide sequence and functional organization of a virus infecting a haloalkaliphilic archaeon. Mol Microbiol 45: 851-863.
-
(2002)
Mol Microbiol
, vol.45
, pp. 851-863
-
-
Klein, R.1
Baranyi, U.2
Greineder, B.3
Scholz, H.4
Witte, A.5
-
20
-
-
84893497778
-
Unification of the globally distributed spindle-shaped viruses of the Archaea
-
Krupovic, M., Quemin, E.R., Bamford, D.H., Forterre, P., and Prangishvili, D. (2014) Unification of the globally distributed spindle-shaped viruses of the Archaea. J Virol 88: 2354-2358.
-
(2014)
J Virol
, vol.88
, pp. 2354-2358
-
-
Krupovic, M.1
Quemin, E.R.2
Bamford, D.H.3
Forterre, P.4
Prangishvili, D.5
-
21
-
-
0034803131
-
Viruses in the plankton of freshwater and saline Antarctic lakes
-
Laybourn-Parry, J., Hofer, J.S., and Sommaruga, R. (2001) Viruses in the plankton of freshwater and saline Antarctic lakes. Freshw Biol 46: 1279-1287.
-
(2001)
Freshw Biol
, vol.46
, pp. 1279-1287
-
-
Laybourn-Parry, J.1
Hofer, J.S.2
Sommaruga, R.3
-
22
-
-
70449376998
-
High diversity of the viral community from an Antarctic lake
-
López-bueno, A., Tamames, J., Velázquez, D., Moya, A., Quesada, A., and Alcamí, A. (2009) High diversity of the viral community from an Antarctic lake. Science 326: 858-861.
-
(2009)
Science
, vol.326
, pp. 858-861
-
-
López-bueno, A.1
Tamames, J.2
Velázquez, D.3
Moya, A.4
Quesada, A.5
Alcamí, A.6
-
23
-
-
69749086719
-
Infrequent marine-freshwater transitions in the microbial world
-
Logares, R., Bråte, J., Bertilsson, S., Clasen, J.L., Shalchian-Tabrizi, K., and Rengefors, K. (2009) Infrequent marine-freshwater transitions in the microbial world. Trends Microbiol 17: 414-422.
-
(2009)
Trends Microbiol
, vol.17
, pp. 414-422
-
-
Logares, R.1
Bråte, J.2
Bertilsson, S.3
Clasen, J.L.4
Shalchian-Tabrizi, K.5
Rengefors, K.6
-
24
-
-
84910124928
-
Viruses of haloarchaea
-
Luk, A.W., Williams, T.J., Erdmann, S., Papke, R.T., and Cavicchioli, R. (2014) Viruses of haloarchaea. Life 4: 681-715.
-
(2014)
Life
, vol.4
, pp. 681-715
-
-
Luk, A.W.1
Williams, T.J.2
Erdmann, S.3
Papke, R.T.4
Cavicchioli, R.5
-
25
-
-
84857371051
-
Metagenomics and future perspectives in virus discovery
-
Mokili, J.L., Rohwer, F., and Dutilh, B.E. (2012) Metagenomics and future perspectives in virus discovery. Curr Opin Virol 2: 63-77.
-
(2012)
Curr Opin Virol
, vol.2
, pp. 63-77
-
-
Mokili, J.L.1
Rohwer, F.2
Dutilh, B.E.3
-
26
-
-
29144485325
-
The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea
-
Mongodin, E.F., Nelson, K.E., Daugherty, S., Deboy, R.T., Wister, J., Khouri, H., etal. (2005) The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea. Proc Natl Acad Sci USA 102: 18147-18152.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 18147-18152
-
-
Mongodin, E.F.1
Nelson, K.E.2
Daugherty, S.3
Deboy, R.T.4
Wister, J.5
Khouri, H.6
-
27
-
-
59149090570
-
MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes
-
Noguchi, H., Taniguchi, T., and Itoh, T. (2008) MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes. DNA Res 15: 387-396.
-
(2008)
DNA Res
, vol.15
, pp. 387-396
-
-
Noguchi, H.1
Taniguchi, T.2
Itoh, T.3
-
28
-
-
77951769203
-
Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds
-
Oh, D., Porter, K., Russ, B., Burns, D., and Dyall-Smith, M. (2010) Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds. Extremophiles 14: 161-169.
-
(2010)
Extremophiles
, vol.14
, pp. 161-169
-
-
Oh, D.1
Porter, K.2
Russ, B.3
Burns, D.4
Dyall-Smith, M.5
-
29
-
-
84872617153
-
-
Oksanen, J., Kindt, R., Legendre, P., O'Hara, B., Simpson, G.L., Solymos, P., etal. (2008) The vegan Package.
-
(2008)
The vegan Package.
-
-
Oksanen, J.1
Kindt, R.2
Legendre, P.3
O'Hara, B.4
Simpson, G.L.5
Solymos, P.6
-
30
-
-
38049107794
-
Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, China
-
Pagaling, E., Haigh, R.D., Grant, W.D., Cowan, D.A., Jones, B.E., Ma, Y., etal. (2007) Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, China. BMC Genomics 8: 410.
-
(2007)
BMC Genomics
, vol.8
, pp. 410
-
-
Pagaling, E.1
Haigh, R.D.2
Grant, W.D.3
Cowan, D.A.4
Jones, B.E.5
Ma, Y.6
-
31
-
-
0343362676
-
The microbial food web along salinity gradients
-
Pedrós-Alió, C., Calderón-Paz, J., MacLean, M., Medina, G., Marrasé, C., Gasol, J.M., and Guixa-Boixereu, N. (2000) The microbial food web along salinity gradients. FEMS Microbiol Ecol 32: 143-155.
-
(2000)
FEMS Microbiol Ecol
, vol.32
, pp. 143-155
-
-
Pedrós-Alió, C.1
Calderón-Paz, J.2
MacLean, M.3
Medina, G.4
Marrasé, C.5
Gasol, J.M.6
Guixa-Boixereu, N.7
-
32
-
-
84861760530
-
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
-
Peng, Y., Leung, H.C., Yiu, S.M., and Chin, F.Y. (2012) IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28: 1420-1428.
-
(2012)
Bioinformatics
, vol.28
, pp. 1420-1428
-
-
Peng, Y.1
Leung, H.C.2
Yiu, S.M.3
Chin, F.Y.4
-
33
-
-
84879546904
-
Structure of the archaeal head-tailed virus HSTV-1 completes the HK97 fold story
-
Pietilä, M.K., and Laurinmäki, P. (2013) Structure of the archaeal head-tailed virus HSTV-1 completes the HK97 fold story. Proc Natl Acad Sci USA 110: 10604-10609.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 10604-10609
-
-
Pietilä, M.K.1
Laurinmäki, P.2
-
34
-
-
84878630144
-
Modified coat protein forms the flexible spindle-shaped virion of haloarchaeal virus His1
-
Pietilä, M.K., Atanasova, N.S., Oksanen, H.M., and Bamford, D.H. (2013a) Modified coat protein forms the flexible spindle-shaped virion of haloarchaeal virus His1. Environ Microbiol 15: 1674-1686.
-
(2013)
Environ Microbiol
, vol.15
, pp. 1674-1686
-
-
Pietilä, M.K.1
Atanasova, N.S.2
Oksanen, H.M.3
Bamford, D.H.4
-
35
-
-
84874681864
-
Insights into head-tailed viruses infecting extremely halophilic archaea
-
Pietilä, M.K., Laurinmäki, P., Russell, D.A., Ko, C.C., Jacobs-Sera, D., Butcher, S.J., etal. (2013b) Insights into head-tailed viruses infecting extremely halophilic archaea. J Virol 87: 3248-3260.
-
(2013)
J Virol
, vol.87
, pp. 3248-3260
-
-
Pietilä, M.K.1
Laurinmäki, P.2
Russell, D.A.3
Ko, C.C.4
Jacobs-Sera, D.5
Butcher, S.J.6
-
36
-
-
84901597419
-
Archaeal viruses and bacteriophages: comparisons and contrasts
-
Pietilä, M.K., Demina, T.A., Atanasova, N.S., Oksanen, H.M., and Bamford, D.H. (2014) Archaeal viruses and bacteriophages: comparisons and contrasts. Trends Microbiol 22: 334-344.
-
(2014)
Trends Microbiol
, vol.22
, pp. 334-344
-
-
Pietilä, M.K.1
Demina, T.A.2
Atanasova, N.S.3
Oksanen, H.M.4
Bamford, D.H.5
-
37
-
-
80051789941
-
The archeoviruses
-
Pina, M., Bize, A., Forterre, P., and Prangishvili, D. (2011) The archeoviruses. FEMS Microbiol Rev 35: 1035-1054.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 1035-1054
-
-
Pina, M.1
Bize, A.2
Forterre, P.3
Prangishvili, D.4
-
38
-
-
16844367255
-
SH1: a novel, spherical halovirus isolated from an Australian hypersaline lake
-
Porter, K., Kukkaro, P., Bamford, J.K., Bath, C., Kivelä, H.M., Dyall-Smith, M.L., and Bamford, D.H. (2005) SH1: a novel, spherical halovirus isolated from an Australian hypersaline lake. Virology 335: 22-33.
-
(2005)
Virology
, vol.335
, pp. 22-33
-
-
Porter, K.1
Kukkaro, P.2
Bamford, J.K.3
Bath, C.4
Kivelä, H.M.5
Dyall-Smith, M.L.6
Bamford, D.H.7
-
39
-
-
84876573419
-
PH1: an archaeovirus of Haloarcula hispanica related to SH1 and HHIV-2
-
Porter, K., Tang, S., Chen, C., Chiang, P., Hong, M., and Dyall-Smith, M. (2013) PH1: an archaeovirus of Haloarcula hispanica related to SH1 and HHIV-2. Archaea 2013: 22-33.
-
(2013)
Archaea
, vol.2013
, pp. 22-33
-
-
Porter, K.1
Tang, S.2
Chen, C.3
Chiang, P.4
Hong, M.5
Dyall-Smith, M.6
-
40
-
-
84884230123
-
The Wonderful World of Archaeal Viruses
-
Prangishvili, D. (2013) The Wonderful World of Archaeal Viruses. Annu Rev Microbiol 67: 565-585.
-
(2013)
Annu Rev Microbiol
, vol.67
, pp. 565-585
-
-
Prangishvili, D.1
-
41
-
-
77949718257
-
FastTree 2-approximately maximum-likelihood trees for large alignments
-
Price, M.N., Dehal, P.S., and Arkin, A.P. (2010) FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS ONE 5: e9490.
-
(2010)
PLoS ONE
, vol.5
, pp. e9490
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
42
-
-
77952670727
-
Viral and microbial community dynamics in four aquatic environments
-
Rodriguez-Brito, B., Li, L., Wegley, L., Furlan, M., Angly, F., Breitbart, M., etal. (2010) Viral and microbial community dynamics in four aquatic environments. ISME J 4: 739-751.
-
(2010)
ISME J
, vol.4
, pp. 739-751
-
-
Rodriguez-Brito, B.1
Li, L.2
Wegley, L.3
Furlan, M.4
Angly, F.5
Breitbart, M.6
-
43
-
-
70350180460
-
Explaining microbial population genomics through phage predation
-
Rodriguez-Valera, F., Martin-Cuadrado, A.B., Rodriguez-Brito, B., Pasić, L., Thingstad, T.F., Rohwer, F., and Mira, A. (2009) Explaining microbial population genomics through phage predation. Nat Rev Microbiol 7: 828-836.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 828-836
-
-
Rodriguez-Valera, F.1
Martin-Cuadrado, A.B.2
Rodriguez-Brito, B.3
Pasić, L.4
Thingstad, T.F.5
Rohwer, F.6
Mira, A.7
-
44
-
-
70350482660
-
Roles of viruses in the environment
-
Rohwer, F., Prangishvili, D., and Lindell, D. (2009) Roles of viruses in the environment. Environ Microbiol 11: 2771-2774.
-
(2009)
Environ Microbiol
, vol.11
, pp. 2771-2774
-
-
Rohwer, F.1
Prangishvili, D.2
Lindell, D.3
-
45
-
-
84856563173
-
Halophiles and hypersaline environments
-
Ventosa, A., Oren, A., and Ma, Y. (eds). Berlin, Heidelberg: Springer Berlin Heidelberg
-
Roine, E., and Oksanen, H.M. (2011) Halophiles and hypersaline environments. In Halophiles and Hypersaline Environments, Vol. 56. Ventosa, A., Oren, A., and Ma, Y. (eds). Berlin, Heidelberg: Springer Berlin Heidelberg, pp. 153-172.
-
(2011)
Halophiles and Hypersaline Environments
, vol.56
, pp. 153-172
-
-
Roine, E.1
Oksanen, H.M.2
-
46
-
-
77949366453
-
New, closely related haloarchaeal viral elements with different nucleic Acid types
-
Roine, E., Kukkaro, P., Paulin, L., Laurinavicius, S., Domanska, A., Somerharju, P., and Bamford, D.H. (2010) New, closely related haloarchaeal viral elements with different nucleic Acid types. J Virol 84: 3682-3689.
-
(2010)
J Virol
, vol.84
, pp. 3682-3689
-
-
Roine, E.1
Kukkaro, P.2
Paulin, L.3
Laurinavicius, S.4
Domanska, A.5
Somerharju, P.6
Bamford, D.H.7
-
47
-
-
80054911634
-
Metavir: a web server dedicated to virome analysis
-
Roux, S., Faubladier, M., Mahul, A., Paulhe, N., Bernard, A., Debroas, D., and Enault, F. (2011) Metavir: a web server dedicated to virome analysis. Bioinformatics 27: 3074-3075.
-
(2011)
Bioinformatics
, vol.27
, pp. 3074-3075
-
-
Roux, S.1
Faubladier, M.2
Mahul, A.3
Paulhe, N.4
Bernard, A.5
Debroas, D.6
Enault, F.7
-
48
-
-
84858263195
-
Assessing the diversity and specificity of two freshwater viral communities through metagenomics
-
Roux, S., Enault, F., Robin, A., Ravet, V., Personnic, S., Theil, S., etal. (2012) Assessing the diversity and specificity of two freshwater viral communities through metagenomics. PLoS ONE 7: e33641.
-
(2012)
PLoS ONE
, vol.7
, pp. e33641
-
-
Roux, S.1
Enault, F.2
Robin, A.3
Ravet, V.4
Personnic, S.5
Theil, S.6
-
49
-
-
84897526477
-
Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences
-
Roux, S., Krupovic, M., Debroas, D., Forterre, P., and Enault, F. (2013) Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences. Open Biol 3: 130160.
-
(2013)
Open Biol
, vol.3
, pp. 130160
-
-
Roux, S.1
Krupovic, M.2
Debroas, D.3
Forterre, P.4
Enault, F.5
-
50
-
-
78149419257
-
The metavirome of a hypersaline environment
-
Santos, F., Yarza, P., Parro, V., Briones, C., and Antón, J. (2010) The metavirome of a hypersaline environment. Environ Microbiol 12: 2965-2976.
-
(2010)
Environ Microbiol
, vol.12
, pp. 2965-2976
-
-
Santos, F.1
Yarza, P.2
Parro, V.3
Briones, C.4
Antón, J.5
-
51
-
-
61949199663
-
Distribution of heterotrophic bacteria and virus-like particles along a salinity gradient in a hypersaline coastal lagoon
-
Schapira, M., Buscot, M., Leterme, S., Pollet, T., Chapperon, C., Seuront, L., etal. (2008) Distribution of heterotrophic bacteria and virus-like particles along a salinity gradient in a hypersaline coastal lagoon. Aquat Microb Ecol 54: 171-183.
-
(2008)
Aquat Microb Ecol
, vol.54
, pp. 171-183
-
-
Schapira, M.1
Buscot, M.2
Leterme, S.3
Pollet, T.4
Chapperon, C.5
Seuront, L.6
-
52
-
-
84897932629
-
A glimpse of the genomic diversity of haloarchaeal tailed viruses
-
Senčilo, A., and Roine, E. (2014) A glimpse of the genomic diversity of haloarchaeal tailed viruses. Front Microbiol 5: 84.
-
(2014)
Front Microbiol
, vol.5
, pp. 84
-
-
Senčilo, A.1
Roine, E.2
-
53
-
-
84879029917
-
Snapshot of haloarchaeal tailed virus genomes
-
Senčilo, A., Jacobs-Sera, D., Russell, D.A., Ko, C.C., Bowman, C.A., Atanasova, N.S., etal. (2013) Snapshot of haloarchaeal tailed virus genomes. RNA Biol 10: 803-816.
-
(2013)
RNA Biol
, vol.10
, pp. 803-816
-
-
Senčilo, A.1
Jacobs-Sera, D.2
Russell, D.A.3
Ko, C.C.4
Bowman, C.A.5
Atanasova, N.S.6
-
54
-
-
80051950963
-
Diversity of virus-host systems in hypersaline Lake Retba, Senegal
-
Sime-Ngando, T., Lucas, S., Robin, A., Tucker, K.P., Colombet, J., Bettarel, Y., etal. (2011) Diversity of virus-host systems in hypersaline Lake Retba, Senegal. Environ Microbiol 13: 1956-1972.
-
(2011)
Environ Microbiol
, vol.13
, pp. 1956-1972
-
-
Sime-Ngando, T.1
Lucas, S.2
Robin, A.3
Tucker, K.P.4
Colombet, J.5
Bettarel, Y.6
-
55
-
-
78651266825
-
Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource
-
Sun, S., Chen, J., Li, W., Altintas, I., Lin, A., Peltier, S., etal. (2011) Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource. Nucleic Acids Res 39: D546-D551.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D546-D551
-
-
Sun, S.1
Chen, J.2
Li, W.3
Altintas, I.4
Lin, A.5
Peltier, S.6
-
56
-
-
1942475398
-
Haloviruses HF1 and HF2: evidence for a recent and large recombination event
-
Tang, S., Nuttall, S., and Dyall-Smith, M. (2004) Haloviruses HF1 and HF2: evidence for a recent and large recombination event. J Bacteriol 186: 2810-2817.
-
(2004)
J Bacteriol
, vol.186
, pp. 2810-2817
-
-
Tang, S.1
Nuttall, S.2
Dyall-Smith, M.3
-
57
-
-
84859228145
-
Do patterns of bacterial diversity along salinity gradients differ from those observed for macroorganisms?
-
Wang, J., Yang, D., Zhang, Y., Shen, J., van der Gast, C., Hahn, M.W., and Wu, Q. (2011) Do patterns of bacterial diversity along salinity gradients differ from those observed for macroorganisms? PLoS ONE 6: e27597.
-
(2011)
PLoS ONE
, vol.6
, pp. e27597
-
-
Wang, J.1
Yang, D.2
Zhang, Y.3
Shen, J.4
van der Gast, C.5
Hahn, M.W.6
Wu, Q.7
-
58
-
-
33747359120
-
Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China
-
Wu, Q.L., Zwart, G., Schauer, M., Kamst-van Agterveld, M.P., and Hahn, M.W. (2006) Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China. Appl Environ Microbiol 72: 5478-5485.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5478-5485
-
-
Wu, Q.L.1
Zwart, G.2
Schauer, M.3
Kamst-van Agterveld, M.P.4
Hahn, M.W.5
|