-
1
-
-
77952474987
-
Cellular heterogeneity: Do differences make a difference?
-
Altschuler SJ, Wu LF. (2010). Cellular heterogeneity: do differences make a difference? Cell 141: 559-63
-
(2010)
Cell
, vol.141
, pp. 559-563
-
-
Altschuler, S.J.1
Wu, L.F.2
-
2
-
-
34250882643
-
Quantitative morphological signatures define local signaling networks regulating cell morphology
-
Bakal C, Aach J, Church G, Perrimon N. (2007). Quantitative morphological signatures define local signaling networks regulating cell morphology. Science 316: 1753-6
-
(2007)
Science
, vol.316
, pp. 1753-1756
-
-
Bakal, C.1
Aach, J.2
Church, G.3
Perrimon, N.4
-
3
-
-
0036139314
-
A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells
-
Boland MV, Murphy RF. (2001). A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells. Bioinformatics 17: 1213-23
-
(2001)
Bioinformatics
, vol.17
, pp. 1213-1223
-
-
Boland, M.V.1
Murphy, R.F.2
-
4
-
-
84949495449
-
Microscopy-based high-content screening
-
Boutros M, Heigwer F, Laufer C. (2015). Microscopy-based high-content screening. Cell 163: 1314-25
-
(2015)
Cell
, vol.163
, pp. 1314-1325
-
-
Boutros, M.1
Heigwer, F.2
Laufer, C.3
-
5
-
-
84949331034
-
The use of faces to represent points in k-dimensional space graphically
-
Chernoff H. (1973). The use of faces to represent points in k-dimensional space graphically. J Am Stat Assoc 68: 361-18
-
(1973)
J Am Stat Assoc
, vol.68
, pp. 361-418
-
-
Chernoff, H.1
-
7
-
-
77949424084
-
Systems survey of endocytosis by multiparametric image analysis
-
Collinet C, Stoter M, Bradshaw CR, et al. (2010). Systems survey of endocytosis by multiparametric image analysis. Nature 464: 243-9
-
(2010)
Nature
, vol.464
, pp. 243-249
-
-
Collinet, C.1
Stoter, M.2
Bradshaw, C.R.3
-
8
-
-
84946763430
-
Apolar and polar transitions drive the conversion between amoeboid and mesenchymal shapes in melanoma cells
-
Cooper S, Sadok A, Bousgouni V, Bakal C. (2015). Apolar and polar transitions drive the conversion between amoeboid and mesenchymal shapes in melanoma cells. Mol Biol Cell 26: 4163-70
-
(2015)
Mol Biol Cell
, vol.26
, pp. 4163-4170
-
-
Cooper, S.1
Sadok, A.2
Bousgouni, V.3
Bakal, C.4
-
11
-
-
0000764772
-
The use of multiple measurements in taxonomic profiles
-
Fisher RA. (1936). The use of multiple measurements in taxonomic profiles. Ann Eugenics 7: 179-88
-
(1936)
Ann Eugenics
, vol.7
, pp. 179-188
-
-
Fisher, R.A.1
-
12
-
-
84857728950
-
Points of view: Heat maps
-
Gehlenborg N, Wong B. (2012a). Points of view: heat maps. Nat Methods 9: 213
-
(2012)
Nat Methods
, vol.9
, pp. 213
-
-
Gehlenborg, N.1
Wong, B.2
-
13
-
-
84864491218
-
Points of view: Mapping quantitative data to color
-
Gehlenborg N, Wong B. (2012b). Points of view: mapping quantitative data to color. Nat Methods 9: 769
-
(2012)
Nat Methods
, vol.9
, pp. 769
-
-
Gehlenborg, N.1
Wong, B.2
-
15
-
-
0001341562
-
High-content screening: A new approach to easing key bottlenecks in the drug discovery process
-
Giuliano KA, Debiaso RL, Dunlay T, et al. (1997). High-content screening: a new approach to easing key bottlenecks in the drug discovery process. J Biomol Screen 2: 249-59
-
(1997)
J Biomol Screen
, vol.2
, pp. 249-259
-
-
Giuliano, K.A.1
Debiaso, R.L.2
Dunlay, T.3
-
16
-
-
33845760114
-
Automated subcellular location determination and high-throughput microscopy
-
Glory E, Murphy RF. (2007). Automated subcellular location determination and high-throughput microscopy. Dev Cell 12: 7-16
-
(2007)
Dev Cell
, vol.12
, pp. 7-16
-
-
Glory, E.1
Murphy, R.F.2
-
17
-
-
84908486214
-
A genomic Multiprocess survey of machineries that control and link cell shape, microtubule organization, and cell-cycle progression
-
Graml V, Studera X, Lawson JL, et al. (2014). A genomic Multiprocess survey of machineries that control and link cell shape, microtubule organization, and cell-cycle progression. Dev Cell 31: 227-39
-
(2014)
Dev Cell
, vol.31
, pp. 227-239
-
-
Graml, V.1
Studera, X.2
Lawson, J.L.3
-
19
-
-
84946738735
-
Joint modeling of cell and nuclear shape variation
-
Johnson GR, Buck TE, Sullivan DP, et al. (2015a). Joint modeling of cell and nuclear shape variation. Mol Biol Cell 26: 4046-56
-
(2015)
Mol Biol Cell
, vol.26
, pp. 4046-4056
-
-
Johnson, G.R.1
Buck, T.E.2
Sullivan, D.P.3
-
20
-
-
84953326165
-
Automated learning of subcellular variation among punctate protein patterns and a generative model of their relation to microtubules
-
Johnson GR, Li J, Shariff A, et al. (2015b). Automated learning of subcellular variation among punctate protein patterns and a generative model of their relation to microtubules. PLoS Comput Biol 11: e1004614
-
(2015)
PLoS Comput Biol
, vol.11
, pp. e1004614
-
-
Johnson, G.R.1
Li, J.2
Shariff, A.3
-
22
-
-
44349186015
-
Mechanism of shape determination in motile cells
-
Keren K, Pincus Z, Allen GM, et al. (2008). Mechanism of shape determination in motile cells. Nature 453: 475-80
-
(2008)
Nature
, vol.453
, pp. 475-480
-
-
Keren, K.1
Pincus, Z.2
Allen, G.M.3
-
23
-
-
84961396287
-
A high-content platform to characterise human induced pluripotent stem cell lines
-
Leha A, Moens N, Meleckyte R, et al. (2015). A high-content platform to characterise human induced pluripotent stem cell lines. Methods. pii: S1046-2023(15)30153-5
-
(2015)
Methods
-
-
Leha, A.1
Moens, N.2
Meleckyte, R.3
-
24
-
-
84902089978
-
A hierarchical map of regulatory genetic interactions in membrane trafficking
-
Liberali P, Snijder B, Pelkmans L. (2014). A hierarchical map of regulatory genetic interactions in membrane trafficking. Cell 157: 1473-87
-
(2014)
Cell
, vol.157
, pp. 1473-1487
-
-
Liberali, P.1
Snijder, B.2
Pelkmans, L.3
-
25
-
-
84927125938
-
Single-cell and multivariate approaches in genetic perturbation screens
-
Liberali P, Snijder B, Pelkmans L. (2015). Single-cell and multivariate approaches in genetic perturbation screens. Nat Rev Genet 16: 18-32
-
(2015)
Nat Rev Genet
, vol.16
, pp. 18-32
-
-
Liberali, P.1
Snijder, B.2
Pelkmans, L.3
-
26
-
-
75549087566
-
Heterogeneity in the physiological states and pharmacological responses of differentiating 3T3-L1 preadipocytes
-
Loo LH, Lin HJ, Singh DK, et al. (2009). Heterogeneity in the physiological states and pharmacological responses of differentiating 3T3-L1 preadipocytes. J Cell Biol 187: 375-84
-
(2009)
J Cell Biol
, vol.187
, pp. 375-384
-
-
Loo, L.H.1
Lin, H.J.2
Singh, D.K.3
-
28
-
-
84859336916
-
CellOrganizer: Image-derived models of subcellular organization and protein distribution
-
Murphy RF. (2012). CellOrganizer: image-derived models of subcellular organization and protein distribution. Methods Cell Biol 110: 179-93
-
(2012)
Methods Cell Biol
, vol.110
, pp. 179-193
-
-
Murphy, R.F.1
-
29
-
-
0018823219
-
Classification of cultured mammalian cells by shape analysis and pattern recognition
-
Olson AC, Larson NM, Heckman CA. (1980). Classification of cultured mammalian cells by shape analysis and pattern recognition. Proc Natl Acad Sci USA 77: 1516-20
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, pp. 1516-1520
-
-
Olson, A.C.1
Larson, N.M.2
Heckman, C.A.3
-
31
-
-
0000678972
-
Contributions to the mathematical theory of evolution. II. Skew variation in homogeneous material
-
Pearson K. (1895). Contributions to the mathematical theory of evolution. II. Skew variation in homogeneous material. Phil Trans R Soc A Math Phys Eng Sci 186: 343-414
-
(1895)
Phil Trans R Soc A Math Phys Eng Sci
, vol.186
, pp. 343-414
-
-
Pearson, K.1
-
32
-
-
84860171972
-
Cell biology. Using cell-to-cell variability- A new era in molecular biology
-
Pelkmans L. (2012). Cell biology. Using cell-to-cell variability- A new era in molecular biology. Science 336: 425-6
-
(2012)
Science
, vol.336
, pp. 425-426
-
-
Pelkmans, L.1
-
33
-
-
8444223104
-
Multidimensional drug profiling by automated microscopy
-
Perlman ZE, Slack MD, Feng Y, et al. (2004). Multidimensional drug profiling by automated microscopy. Science 306: 1194-8
-
(2004)
Science
, vol.306
, pp. 1194-1198
-
-
Perlman, Z.E.1
Slack, M.D.2
Feng, Y.3
-
34
-
-
34548515317
-
Comparison of quantitative methods for cell-shape analysis
-
Pincus Z, Theriot JA. (2007). Comparison of quantitative methods for cell-shape analysis. J Microsc 227: 140-56
-
(2007)
J Microsc
, vol.227
, pp. 140-156
-
-
Pincus, Z.1
Theriot, J.A.2
-
35
-
-
84863194446
-
SimuCell: A flexible framework for creating synthetic microscopy images
-
Rajaram S, Pavie B, Hac NE, et al. (2012). SimuCell: a flexible framework for creating synthetic microscopy images. Nat Methods 9: 634-5
-
(2012)
Nat Methods
, vol.9
, pp. 634-635
-
-
Rajaram, S.1
Pavie, B.2
Hac, N.E.3
-
36
-
-
84863879050
-
Quantitative comparison of immunohistochemical staining measured by digital image analysis versus pathologist visual scoring
-
Rizzardi AE, Johnson AT, Vogel RI, et al. (2012). Quantitative comparison of immunohistochemical staining measured by digital image analysis versus pathologist visual scoring. Diagn Pathol 7: 42
-
(2012)
Diagn Pathol
, vol.7
, pp. 42
-
-
Rizzardi, A.E.1
Johnson, A.T.2
Vogel, R.I.3
-
37
-
-
84901044347
-
Cross-talk between Rho and Rac GTPases drives deterministic exploration of cellular shape space and morphological heterogeneity
-
Sailem H, Bousgouni V, Cooper S, Bakal C. (2014). Cross-talk between Rho and Rac GTPases drives deterministic exploration of cellular shape space and morphological heterogeneity. Open Biol 4: 130132
-
(2014)
Open Biol
, vol.4
, pp. 130132
-
-
Sailem, H.1
Bousgouni, V.2
Cooper, S.3
Bakal, C.4
-
38
-
-
84923775038
-
Visualizing cellular imaging data using PhenoPlot
-
Sailem HZ, Sero JE, Bakal C. (2015). Visualizing cellular imaging data using PhenoPlot. Nat Commun 6: 5825
-
(2015)
Nat Commun
, vol.6
, pp. 5825
-
-
Sailem, H.Z.1
Sero, J.E.2
Bakal, C.3
-
39
-
-
84925832811
-
Cell shape and the microenvironment regulate nuclear translocation of NF-kappaB in breast epithelial and tumor cells
-
Sero JE, Sailem HZ, Ardy RC, et al. (2015). Cell shape and the microenvironment regulate nuclear translocation of NF-kappaB in breast epithelial and tumor cells. Mol Syst Biol 11: 790
-
(2015)
Mol Syst Biol
, vol.11
, pp. 790
-
-
Sero, J.E.1
Sailem, H.Z.2
Ardy, R.C.3
-
40
-
-
77956015614
-
Automated image analysis for high-content screening and analysis
-
Shariff A, Kangas J, Coelho LP, et al. (2010). Automated image analysis for high-content screening and analysis. J Biomol Screen 15: 726-34
-
(2010)
J Biomol Screen
, vol.15
, pp. 726-734
-
-
Shariff, A.1
Kangas, J.2
Coelho, L.P.3
-
41
-
-
77952257945
-
Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities
-
Singh DK, Ku CJ, Wichaidit C, et al. (2010). Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities. Mol Syst Biol 6: 3693RD
-
(2010)
Mol Syst Biol
, vol.6
, pp. 3693RD
-
-
Singh, D.K.1
Ku, C.J.2
Wichaidit, C.3
-
43
-
-
84887104223
-
Predicting functional gene interactions with the hierarchical interaction score
-
Snijder B, Liberali P, Frechin M, et al. (2013). Predicting functional gene interactions with the hierarchical interaction score. Nat Methods 10: 1089-92
-
(2013)
Nat Methods
, vol.10
, pp. 1089-1092
-
-
Snijder, B.1
Liberali, P.2
Frechin, M.3
-
44
-
-
70349466529
-
Population context determines cell-to-cell variability in endocytosis and virus infection
-
Snijder B, Sacher R, Ramo P, et al. (2009). Population context determines cell-to-cell variability in endocytosis and virus infection. Nature 461: 520-3
-
(2009)
Nature
, vol.461
, pp. 520-523
-
-
Snijder, B.1
Sacher, R.2
Ramo, P.3
-
45
-
-
84860187343
-
Single-cell analysis of population context advances RNAi screening at multiple levels
-
Snijder B, Sacher R, Ramo P, et al. (2012). Single-cell analysis of population context advances RNAi screening at multiple levels. Mol Syst Biol 8: 579
-
(2012)
Mol Syst Biol
, vol.8
, pp. 579
-
-
Snijder, B.1
Sacher, R.2
Ramo, P.3
-
46
-
-
34548557938
-
Past, present, and future of high content screening and the field of cellomics
-
Taylor DL. (2007). Past, present, and future of high content screening and the field of cellomics. Methods Mol Biol 356: 3-18
-
(2007)
Methods Mol Biol
, vol.356
, pp. 3-18
-
-
Taylor, D.L.1
-
48
-
-
84929500859
-
Beyond bar and line graphs: Time for a new data presentation paradigm
-
Weissgerber TL, Milic NM, Winham SJ, Garovic VD. (2015). Beyond bar and line graphs: time for a new data presentation paradigm. PLoS Biol 13: e1002128
-
(2015)
PLoS Biol
, vol.13
, pp. e1002128
-
-
Weissgerber, T.L.1
Milic, N.M.2
Winham, S.J.3
Garovic, V.D.4
-
50
-
-
77955130275
-
Points of view: Color coding
-
Wong B. (2010). Points of view: color coding. Nat Methods 7: 573
-
(2010)
Nat Methods
, vol.7
, pp. 573
-
-
Wong, B.1
-
51
-
-
84880328076
-
A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes
-
Yin Z, Sadok A, Sailem H, et al. (2013). A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes. Nat Cell Biol 15: 860-71
-
(2013)
Nat Cell Biol
, vol.15
, pp. 860-871
-
-
Yin, Z.1
Sadok, A.2
Sailem, H.3
-
52
-
-
84920278831
-
How cells explore shape space: A quantitative statistical perspective of cellular morphogenesis
-
Yin Z, Sailem H, Sero J, et al. (2014). How cells explore shape space: a quantitative statistical perspective of cellular morphogenesis. Bioessays 36: 1195-203
-
(2014)
Bioessays
, vol.36
, pp. 1195-1203
-
-
Yin, Z.1
Sailem, H.2
Sero, J.3
|