Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples

PLoS ONE

Volumn 11, Issue 2, 2016, Pages

  Barb, Jennifer J ^a   Oler, Andrew J ^b   Kim, Hyung Suk ^c   Chalmers, Natalia ^d   Wallen, Gwenyth R ^a   Cashion, Ann ^c   Munson, Peter J ^a   Ames, Nancy J ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

^b NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES   (United States)

^c NATIONAL INSTITUTE OF NURSING RESEARCH   (United States)

^d NATIONAL INSTITUTE OF DENTAL AND CRANIOFACIAL RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

AMPLICON; ARTICLE; BACTERIAL STRAIN; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; FAMILIA; GENE STRUCTURE; GENETIC VARIABILITY; GENUS; HYPERVARIABLE REGION; NEXT GENERATION SEQUENCING; NONHUMAN; OPERON; RNA SEQUENCE; SEQUENCE ANALYSIS; SPECIES DISTRIBUTION; BACTERIUM; BIOLOGY; CLASSIFICATION; DNA BARCODING; DNA SEQUENCE; GENE LOCUS; GENE ORDER; GENETIC VARIATION; GENETICS; HIGH THROUGHPUT SEQUENCING; METAGENOMICS; PROCEDURES;

BACTERIA; COMPUTATIONAL BIOLOGY; DNA BARCODING, TAXONOMIC; GENE ORDER; GENETIC LOCI; GENETIC VARIATION; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; METAGENOMICS; OPERON; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84958786976     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0148047     Document Type: Article

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