메뉴 건너뛰기




Volumn 14, Issue 5, 2016, Pages 1049-1061

Host-Microbiota Interactions in the Pathogenesis of Antibiotic-Associated Diseases

Author keywords

[No Author keywords available]

Indexed keywords

CLINDAMYCIN; PROTEOME; RNA 16S; STREPTOMYCIN; ANTIINFECTIVE AGENT;

EID: 84957935234     PISSN: None     EISSN: 22111247     Source Type: Journal    
DOI: 10.1016/j.celrep.2016.01.009     Document Type: Article
Times cited : (66)

References (41)
  • 1
    • 75649093343 scopus 로고    scopus 로고
    • Toll-like receptor signalling in the intestinal epithelium: how bacterial recognition shapes intestinal function
    • Abreu M.T. Toll-like receptor signalling in the intestinal epithelium: how bacterial recognition shapes intestinal function. Nat. Rev. Immunol. 2010, 10:131-144.
    • (2010) Nat. Rev. Immunol. , vol.10 , pp. 131-144
    • Abreu, M.T.1
  • 2
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • Anders S., Huber W. Differential expression analysis for sequence count data. Genome Biol. 2010, 11:R106.
    • (2010) Genome Biol. , vol.11 , pp. R106
    • Anders, S.1    Huber, W.2
  • 4
    • 84875098273 scopus 로고    scopus 로고
    • Comparison of sequencing utility programs
    • Aronesty E. Comparison of sequencing utility programs. Open Bioinform. J. 2013, 7:1-8.
    • (2013) Open Bioinform. J. , vol.7 , pp. 1-8
    • Aronesty, E.1
  • 5
    • 0033675729 scopus 로고    scopus 로고
    • Treatment and prevention of antibiotic associated diarrhea
    • Bergogne-Bérézin E. Treatment and prevention of antibiotic associated diarrhea. Int. J. Antimicrob. Agents 2000, 16:521-526.
    • (2000) Int. J. Antimicrob. Agents , vol.16 , pp. 521-526
    • Bergogne-Bérézin, E.1
  • 8
    • 84857067037 scopus 로고    scopus 로고
    • Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis
    • Buffie C.G., Jarchum I., Equinda M., Lipuma L., Gobourne A., Viale A., Ubeda C., Xavier J., Pamer E.G. Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis. Infect. Immun. 2012, 80:62-73.
    • (2012) Infect. Immun. , vol.80 , pp. 62-73
    • Buffie, C.G.1    Jarchum, I.2    Equinda, M.3    Lipuma, L.4    Gobourne, A.5    Viale, A.6    Ubeda, C.7    Xavier, J.8    Pamer, E.G.9
  • 11
    • 33748039462 scopus 로고    scopus 로고
    • Symbiotic bacteria direct expression of an intestinal bactericidal lectin
    • Cash H.L., Whitham C.V., Behrendt C.L., Hooper L.V. Symbiotic bacteria direct expression of an intestinal bactericidal lectin. Science 2006, 313:1126-1130.
    • (2006) Science , vol.313 , pp. 1126-1130
    • Cash, H.L.1    Whitham, C.V.2    Behrendt, C.L.3    Hooper, L.V.4
  • 12
    • 58149299336 scopus 로고    scopus 로고
    • Significance analysis of spectral count data in label-free shotgun proteomics
    • Choi H., Fermin D., Nesvizhskii A.I. Significance analysis of spectral count data in label-free shotgun proteomics. Mol. Cell. Proteomics 2008, 7:2373-2385.
    • (2008) Mol. Cell. Proteomics , vol.7 , pp. 2373-2385
    • Choi, H.1    Fermin, D.2    Nesvizhskii, A.I.3
  • 13
    • 0027224059 scopus 로고
    • Clinicopathologic study of dextran sulfate sodium experimental murine colitis
    • Cooper H.S., Murthy S.N., Shah R.S., Sedergran D.J. Clinicopathologic study of dextran sulfate sodium experimental murine colitis. Lab. Invest. 1993, 69:238-249.
    • (1993) Lab. Invest. , vol.69 , pp. 238-249
    • Cooper, H.S.1    Murthy, S.N.2    Shah, R.S.3    Sedergran, D.J.4
  • 14
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • Costello E.K., Lauber C.L., Hamady M., Fierer N., Gordon J.I., Knight R. Bacterial community variation in human body habitats across space and time. Science 2009, 326:1694-1697.
    • (2009) Science , vol.326 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3    Fierer, N.4    Gordon, J.I.5    Knight, R.6
  • 15
    • 77957151956 scopus 로고    scopus 로고
    • SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
    • Cox M.P., Peterson D.A., Biggs P.J. SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data. BMC Bioinformatics 2010, 11:485.
    • (2010) BMC Bioinformatics , vol.11 , pp. 485
    • Cox, M.P.1    Peterson, D.A.2    Biggs, P.J.3
  • 18
    • 79952756960 scopus 로고    scopus 로고
    • Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
    • Dethlefsen L., Relman D.A. Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation. Proc. Natl. Acad. Sci. USA 2011, 108(Suppl 1):4554-4561.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 4554-4561
    • Dethlefsen, L.1    Relman, D.A.2
  • 19
    • 33847630405 scopus 로고    scopus 로고
    • Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
    • Elias J.E., Gygi S.P. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 2007, 4:207-214.
    • (2007) Nat. Methods , vol.4 , pp. 207-214
    • Elias, J.E.1    Gygi, S.P.2
  • 20
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng J.K., McCormack A.L., Yates J.R. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 1994, 5:976-989.
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 23
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • Huang W., Sherman B.T., Lempicki R.A. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 2009, 37:1-13.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1-13
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 24
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang W., Sherman B.T., Lempicki R.A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 2009, 4:44-57.
    • (2009) Nat. Protoc. , vol.4 , pp. 44-57
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 26
  • 27
    • 84868158515 scopus 로고    scopus 로고
    • Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice
    • Lawley T.D., Clare S., Walker A.W., Stares M.D., Connor T.R., Raisen C., Goulding D., Rad R., Schreiber F., Brandt C., et al. Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice. PLoS Pathog. 2012, 8:e1002995.
    • (2012) PLoS Pathog. , vol.8 , pp. e1002995
    • Lawley, T.D.1    Clare, S.2    Walker, A.W.3    Stares, M.D.4    Connor, T.R.5    Raisen, C.6    Goulding, D.7    Rad, R.8    Schreiber, F.9    Brandt, C.10
  • 28
    • 84887096280 scopus 로고    scopus 로고
    • Host-centric proteomics of stool: a novel strategy focused on intestinal responses to the gut microbiota
    • Lichtman J.S., Marcobal A., Sonnenburg J.L., Elias J.E. Host-centric proteomics of stool: a novel strategy focused on intestinal responses to the gut microbiota. Mol. Cell. Proteomics 2013, 12:3310-3318.
    • (2013) Mol. Cell. Proteomics , vol.12 , pp. 3310-3318
    • Lichtman, J.S.1    Marcobal, A.2    Sonnenburg, J.L.3    Elias, J.E.4
  • 29
    • 84939564256 scopus 로고    scopus 로고
    • Monitoring host responses to the gut microbiota
    • Lichtman J.S., Sonnenburg J.L., Elias J.E. Monitoring host responses to the gut microbiota. ISME J. 2015, 9:1908-1915.
    • (2015) ISME J. , vol.9 , pp. 1908-1915
    • Lichtman, J.S.1    Sonnenburg, J.L.2    Elias, J.E.3
  • 30
    • 15544382565 scopus 로고    scopus 로고
    • Immunity, inflammation, and allergy in the gut
    • Macdonald T.T., Monteleone G. Immunity, inflammation, and allergy in the gut. Science 2005, 307:1920-1925.
    • (2005) Science , vol.307 , pp. 1920-1925
    • Macdonald, T.T.1    Monteleone, G.2
  • 31
    • 55249108031 scopus 로고    scopus 로고
    • Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont
    • Martens E.C., Chiang H.C., Gordon J.I. Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont. Cell Host Microbe 2008, 4:447-457.
    • (2008) Cell Host Microbe , vol.4 , pp. 447-457
    • Martens, E.C.1    Chiang, H.C.2    Gordon, J.I.3
  • 32
    • 77958457927 scopus 로고    scopus 로고
    • Clostridium difficile toxin A decreases acetylation of tubulin, leading to microtubule depolymerization through activation of histone deacetylase 6, and this mediates acute inflammation
    • Nam H.J., Kang J.K., Kim S.-K., Ahn K.J., Seok H., Park S.J., Chang J.S., Pothoulakis C., Lamont J.T., Kim H. Clostridium difficile toxin A decreases acetylation of tubulin, leading to microtubule depolymerization through activation of histone deacetylase 6, and this mediates acute inflammation. J. Biol. Chem. 2010, 285:32888-32896.
    • (2010) J. Biol. Chem. , vol.285 , pp. 32888-32896
    • Nam, H.J.1    Kang, J.K.2    Kim, S.-K.3    Ahn, K.J.4    Seok, H.5    Park, S.J.6    Chang, J.S.7    Pothoulakis, C.8    Lamont, J.T.9    Kim, H.10
  • 34
    • 0035123755 scopus 로고    scopus 로고
    • Salmonella: a model for bacterial pathogenesis
    • Ohl M.E., Miller S.I. Salmonella: a model for bacterial pathogenesis. Annu. Rev. Med. 2001, 52:259-274.
    • (2001) Annu. Rev. Med. , vol.52 , pp. 259-274
    • Ohl, M.E.1    Miller, S.I.2
  • 35
    • 53649106826 scopus 로고    scopus 로고
    • Antibiotic-induced perturbations of the intestinal microbiota alter host susceptibility to enteric infection
    • Sekirov I., Tam N.M., Jogova M., Robertson M.L., Li Y., Lupp C., Finlay B.B. Antibiotic-induced perturbations of the intestinal microbiota alter host susceptibility to enteric infection. Infect. Immun. 2008, 76:4726-4736.
    • (2008) Infect. Immun. , vol.76 , pp. 4726-4736
    • Sekirov, I.1    Tam, N.M.2    Jogova, M.3    Robertson, M.L.4    Li, Y.5    Lupp, C.6    Finlay, B.B.7
  • 37
    • 84940998804 scopus 로고    scopus 로고
    • Pancreatic β-cells limit autoimmune diabetes via an immunoregulatory antimicrobial peptide expressed under the influence of the gut microbiota
    • Sun J., Furio L., Mecheri R., van der Does A.M., Lundeberg E., Saveanu L., Chen Y., van Endert P., Agerberth B., Diana J. Pancreatic β-cells limit autoimmune diabetes via an immunoregulatory antimicrobial peptide expressed under the influence of the gut microbiota. Immunity 2015, 43:304-317.
    • (2015) Immunity , vol.43 , pp. 304-317
    • Sun, J.1    Furio, L.2    Mecheri, R.3    van der Does, A.M.4    Lundeberg, E.5    Saveanu, L.6    Chen, Y.7    van Endert, P.8    Agerberth, B.9    Diana, J.10
  • 38
    • 53849124658 scopus 로고    scopus 로고
    • How host-bacterial interactions lead to IgA synthesis in the gut
    • Suzuki K., Fagarasan S. How host-bacterial interactions lead to IgA synthesis in the gut. Trends Immunol. 2008, 29:523-531.
    • (2008) Trends Immunol. , vol.29 , pp. 523-531
    • Suzuki, K.1    Fagarasan, S.2
  • 39
    • 84865380796 scopus 로고    scopus 로고
    • Sensing of commensal organisms by the intracellular sensor NOD1 mediates experimental pancreatitis
    • Tsuji Y., Watanabe T., Kudo M., Arai H., Strober W., Chiba T. Sensing of commensal organisms by the intracellular sensor NOD1 mediates experimental pancreatitis. Immunity 2012, 37:326-338.
    • (2012) Immunity , vol.37 , pp. 326-338
    • Tsuji, Y.1    Watanabe, T.2    Kudo, M.3    Arai, H.4    Strober, W.5    Chiba, T.6
  • 41
    • 0023937746 scopus 로고
    • Melanosis coli. A consequence of anthraquinone-induced apoptosis of colonic epithelial cells
    • Walker N.I., Bennett R.E., Axelsen R.A. Melanosis coli. A consequence of anthraquinone-induced apoptosis of colonic epithelial cells. Am. J. Pathol. 1988, 131:465-476.
    • (1988) Am. J. Pathol. , vol.131 , pp. 465-476
    • Walker, N.I.1    Bennett, R.E.2    Axelsen, R.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.