-
1
-
-
34547108086
-
Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana
-
Clark R.M., Schweikert G., Toomajian C., Ossowski S., Zeller G., Shinn P., Warthmann N., Hu T.T., Fu G., Hinds D., et al. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 2007, 317:338-342.
-
(2007)
Science
, vol.317
, pp. 338-342
-
-
Clark, R.M.1
Schweikert, G.2
Toomajian, C.3
Ossowski, S.4
Zeller, G.5
Shinn, P.6
Warthmann, N.7
Hu, T.T.8
Fu, G.9
Hinds, D.10
-
2
-
-
84862936211
-
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
-
Xu X., Liu X., Ge S., Jensen J.D., Hu F., Li X., Dong Y., Gutenkunst R.N., Fang L., Huang L., et al. Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes. Nat Biotechnol 2011, 30:105-111.
-
(2011)
Nat Biotechnol
, vol.30
, pp. 105-111
-
-
Xu, X.1
Liu, X.2
Ge, S.3
Jensen, J.D.4
Hu, F.5
Li, X.6
Dong, Y.7
Gutenkunst, R.N.8
Fang, L.9
Huang, L.10
-
3
-
-
73649121258
-
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content
-
Springer N.M., Ying K., Fu Y., Ji T., Yeh C.-T., Jia Y., Wu W., Richmond T., Kitzman J., Rosenbaum H., et al. Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content. PLoS Genet 2009, 5:e1000734.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000734
-
-
Springer, N.M.1
Ying, K.2
Fu, Y.3
Ji, T.4
Yeh, C.-T.5
Jia, Y.6
Wu, W.7
Richmond, T.8
Kitzman, J.9
Rosenbaum, H.10
-
4
-
-
80054797858
-
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
-
Branca A., Paape T.D., Zhou P., Briskine R., Farmer A.D., Mudge J., Bharti A.K., Woodward J.E., May G.D., Gentzbittel L., et al. Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proc Natl Acad Sci USA 2011, 108:E864-E870.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. E864-E870
-
-
Branca, A.1
Paape, T.D.2
Zhou, P.3
Briskine, R.4
Farmer, A.D.5
Mudge, J.6
Bharti, A.K.7
Woodward, J.E.8
May, G.D.9
Gentzbittel, L.10
-
5
-
-
84864692624
-
Structural variants in the soybean genome localize to clusters of biotic stress-response genes
-
McHale L.K., Haun W.J., Xu W.W., Bhaskar P.B., Anderson J.E., Hyten D.L., Gerhardt D.J., Jeddeloh J.A., Stupar R.M. Structural variants in the soybean genome localize to clusters of biotic stress-response genes. Plant Physiol 2012, 159:1295-1308.
-
(2012)
Plant Physiol
, vol.159
, pp. 1295-1308
-
-
McHale, L.K.1
Haun, W.J.2
Xu, W.W.3
Bhaskar, P.B.4
Anderson, J.E.5
Hyten, D.L.6
Gerhardt, D.J.7
Jeddeloh, J.A.8
Stupar, R.M.9
-
6
-
-
70449704529
-
Computational methods for discovering structural variation with next-generation sequencing
-
Medvedev P., Stanciu M., Brudno M. Computational methods for discovering structural variation with next-generation sequencing. Nat Methods 2009, 6:S13-S20.
-
(2009)
Nat Methods
, vol.6
, pp. S13-S20
-
-
Medvedev, P.1
Stanciu, M.2
Brudno, M.3
-
7
-
-
69749122557
-
Sensitive and accurate detection of copy number variants using read depth of coverage
-
Yoon S., Xuan Z., Makarov V., Ye K., Sebat J. Sensitive and accurate detection of copy number variants using read depth of coverage. Genome Res 2009, 19:1586-1592.
-
(2009)
Genome Res
, vol.19
, pp. 1586-1592
-
-
Yoon, S.1
Xuan, Z.2
Makarov, V.3
Ye, K.4
Sebat, J.5
-
8
-
-
79954672317
-
Genome structural variation discovery and genotyping
-
Alkan C., Coe B.P., Eichler E.E. Genome structural variation discovery and genotyping. Nat Rev Genet 2011, 12:363-376.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 363-376
-
-
Alkan, C.1
Coe, B.P.2
Eichler, E.E.3
-
9
-
-
84927128250
-
Whole-genome CNV analysis: advances in computational approaches
-
Pirooznia M., Goes F.S., Zandi P.P. Whole-genome CNV analysis: advances in computational approaches. Front Genet 2015, 6:138.
-
(2015)
Front Genet
, vol.6
, pp. 138
-
-
Pirooznia, M.1
Goes, F.S.2
Zandi, P.P.3
-
10
-
-
77958462555
-
Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales
-
DeBolt S. Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol Evol 2010, 2:441-453.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 441-453
-
-
DeBolt, S.1
-
11
-
-
78549273825
-
Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
-
Swanson-Wagner R.A., Eichten S.R., Kumari S., Tiffin P., Stein J.C., Ware D., Springer N.M. Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Res 2010, 20:1689-1699.
-
(2010)
Genome Res
, vol.20
, pp. 1689-1699
-
-
Swanson-Wagner, R.A.1
Eichten, S.R.2
Kumari, S.3
Tiffin, P.4
Stein, J.C.5
Ware, D.6
Springer, N.M.7
-
12
-
-
84868016827
-
Statistical challenges associated with detecting copy number variations with next-generation sequencing
-
Teo S.M., Pawitan Y., Ku C.S., Chia K.S., Salim A. Statistical challenges associated with detecting copy number variations with next-generation sequencing. Bioinformatics 2012, 28:2711-2718.
-
(2012)
Bioinformatics
, vol.28
, pp. 2711-2718
-
-
Teo, S.M.1
Pawitan, Y.2
Ku, C.S.3
Chia, K.S.4
Salim, A.5
-
13
-
-
34447102400
-
Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants
-
Silverstein K.A.T., Moskal W.A., Wu H.C., Underwood B.A., Graham M.A., Town C.D., VandenBosch K.A. Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J 2007, 51:262-280.
-
(2007)
Plant J
, vol.51
, pp. 262-280
-
-
Silverstein, K.A.T.1
Moskal, W.A.2
Wu, H.C.3
Underwood, B.A.4
Graham, M.A.5
Town, C.D.6
VandenBosch, K.A.7
-
14
-
-
33745040554
-
Plant NBS-LRR proteins: adaptable guards
-
McHale L., Tan X., Koehl P., Michelmore R.W. Plant NBS-LRR proteins: adaptable guards. Genome Biol 2006, 7:212.
-
(2006)
Genome Biol
, vol.7
, pp. 212
-
-
McHale, L.1
Tan, X.2
Koehl, P.3
Michelmore, R.W.4
-
15
-
-
84870693546
-
Genomic variation and its impact on gene expression in Drosophila melanogaster
-
Massouras A., Waszak S.M., Albarca-Aguilera M., Hens K., Holcombe W., Ayroles J.F., Dermitzakis E.T., Stone E.A., Jensen J.D., Mackay T.F.C., et al. Genomic variation and its impact on gene expression in Drosophila melanogaster. PLoS Genet 2012, 8:e1003055.
-
(2012)
PLoS Genet
, vol.8
, pp. e1003055
-
-
Massouras, A.1
Waszak, S.M.2
Albarca-Aguilera, M.3
Hens, K.4
Holcombe, W.5
Ayroles, J.F.6
Dermitzakis, E.T.7
Stone, E.A.8
Jensen, J.D.9
Mackay, T.F.C.10
-
16
-
-
84922584295
-
Comprehensive variation discovery in single human genomes
-
Weisenfeld N.I., Yin S., Sharpe T., Lau B., Hegarty R., Holmes L., Sogoloff B., Tabbaa D., Williams L., Russ C., et al. Comprehensive variation discovery in single human genomes. Nat Genet 2014, 46:1350-1355.
-
(2014)
Nat Genet
, vol.46
, pp. 1350-1355
-
-
Weisenfeld, N.I.1
Yin, S.2
Sharpe, T.3
Lau, B.4
Hegarty, R.5
Holmes, L.6
Sogoloff, B.7
Tabbaa, D.8
Williams, L.9
Russ, C.10
-
17
-
-
0037390933
-
Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis
-
Meyers B.C. Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. Plant Cell Online 2003, 15:809-834.
-
(2003)
Plant Cell Online
, vol.15
, pp. 809-834
-
-
Meyers, B.C.1
-
18
-
-
80053384429
-
Whole-genome sequencing of multiple Arabidopsis thaliana populations
-
Cao J., Schneeberger K., Ossowski S., Günther T., Bender S., Fitz J., Koenig D., Lanz C., Stegle O., Lippert C., et al. Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat Genet 2011, 43:956-963.
-
(2011)
Nat Genet
, vol.43
, pp. 956-963
-
-
Cao, J.1
Schneeberger, K.2
Ossowski, S.3
Günther, T.4
Bender, S.5
Fitz, J.6
Koenig, D.7
Lanz, C.8
Stegle, O.9
Lippert, C.10
-
19
-
-
80053132716
-
Multiple reference genomes and transcriptomes for Arabidopsis thaliana
-
Gan X., Stegle O., Behr J., Steffen J.G., Drewe P., Hildebrand K.L., Lyngsoe R., Schultheiss S.J., Osborne E.J., Sreedharan V.T., et al. Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 2011, 477:419-423.
-
(2011)
Nature
, vol.477
, pp. 419-423
-
-
Gan, X.1
Stegle, O.2
Behr, J.3
Steffen, J.G.4
Drewe, P.5
Hildebrand, K.L.6
Lyngsoe, R.7
Schultheiss, S.J.8
Osborne, E.J.9
Sreedharan, V.T.10
-
20
-
-
57149089296
-
Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids
-
Lyons E., Pedersen B., Kane J., Alam M., Ming R., Tang H., Wang X., Bowers J., Paterson A., Lisch D., et al. Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. Plant Physiol 2008, 148:1772-1781.
-
(2008)
Plant Physiol
, vol.148
, pp. 1772-1781
-
-
Lyons, E.1
Pedersen, B.2
Kane, J.3
Alam, M.4
Ming, R.5
Tang, H.6
Wang, X.7
Bowers, J.8
Paterson, A.9
Lisch, D.10
-
21
-
-
79952178131
-
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
-
Gnerre S., MacCallum I., Przybylski D., Ribeiro F.J., Burton J.N., Walker B.J., Sharpe T., Hall G., Shea T.P., Sykes S., et al. High-quality draft assemblies of mammalian genomes from massively parallel sequence data. Proc Natl Acad Sci USA 2011, 108:1513-1518.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 1513-1518
-
-
Gnerre, S.1
MacCallum, I.2
Przybylski, D.3
Ribeiro, F.J.4
Burton, J.N.5
Walker, B.J.6
Sharpe, T.7
Hall, G.8
Shea, T.P.9
Sykes, S.10
-
22
-
-
70349556543
-
Personalized copy number and segmental duplication maps using next-generation sequencing
-
Alkan C., Kidd J.M., Marques-Bonet T., Aksay G., Antonacci F., Hormozdiari F., Kitzman J.O., Baker C., Malig M., Mutlu O., et al. Personalized copy number and segmental duplication maps using next-generation sequencing. Nat Genet 2009, 41:1061-1067.
-
(2009)
Nat Genet
, vol.41
, pp. 1061-1067
-
-
Alkan, C.1
Kidd, J.M.2
Marques-Bonet, T.3
Aksay, G.4
Antonacci, F.5
Hormozdiari, F.6
Kitzman, J.O.7
Baker, C.8
Malig, M.9
Mutlu, O.10
-
23
-
-
84919474188
-
Rapid diversification of five Oryza AA genomes associated with rice adaptation
-
Zhang Q.-J., Zhu T., Xia E.-H., Shi C., Liu Y.-L., Zhang Y., Liu Y., Jiang W.-K., Zhao Y.-J., Mao S.-Y., et al. Rapid diversification of five Oryza AA genomes associated with rice adaptation. Proc Natl Acad Sci USA 2014, 111:E4954-E4962.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. E4954-E4962
-
-
Zhang, Q.-J.1
Zhu, T.2
Xia, E.-H.3
Shi, C.4
Liu, Y.-L.5
Zhang, Y.6
Liu, Y.7
Jiang, W.-K.8
Zhao, Y.-J.9
Mao, S.-Y.10
-
24
-
-
84965187491
-
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica
-
Schatz M.C., Maron L.G., Stein J.C., Wences A., Gurtowski J., Biggers E., Lee H., Kramer M., Antoniou E., Ghiban E., et al. Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica. Genome Biol 2014, 15:506.
-
(2014)
Genome Biol
, vol.15
, pp. 506
-
-
Schatz, M.C.1
Maron, L.G.2
Stein, J.C.3
Wences, A.4
Gurtowski, J.5
Biggers, E.6
Lee, H.7
Kramer, M.8
Antoniou, E.9
Ghiban, E.10
-
25
-
-
84923019049
-
De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits
-
Li Y., Zhou G., Ma J., Jiang W., Jin L., Zhang Z., Guo Y., Zhang J., Sui Y., Zheng L., et al. De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits. Nat Biotechnol 2014, 32:1045-1052.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 1045-1052
-
-
Li, Y.1
Zhou, G.2
Ma, J.3
Jiang, W.4
Jin, L.5
Zhang, Z.6
Guo, Y.7
Zhang, J.8
Sui, Y.9
Zheng, L.10
-
26
-
-
84896808010
-
Insights into the maize pan-genome and pan-transcriptome
-
Hirsch C.N., Foerster J.M., Johnson J.M., Sekhon R.S., Muttoni G., Vaillancourt B., Peñagaricano F., Lindquist E., Pedraza M.A., Barry K., et al. Insights into the maize pan-genome and pan-transcriptome. Plant Cell 2014, 26:121-135.
-
(2014)
Plant Cell
, vol.26
, pp. 121-135
-
-
Hirsch, C.N.1
Foerster, J.M.2
Johnson, J.M.3
Sekhon, R.S.4
Muttoni, G.5
Vaillancourt, B.6
Peñagaricano, F.7
Lindquist, E.8
Pedraza, M.A.9
Barry, K.10
-
27
-
-
78049405533
-
Bin: numbers of genes in the NBS and RLK families vary by more than four-fold within a plant species and are regulated by multiple factors
-
Zhang M., Wu Y.H., Lee M.K., Liu Y.H., Rong Y., Santos T.S., Wu C., Xie F., Nelson R.L., Zhang H. Bin: numbers of genes in the NBS and RLK families vary by more than four-fold within a plant species and are regulated by multiple factors. Nucleic Acids Res 2010, 38:6513-6525.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 6513-6525
-
-
Zhang, M.1
Wu, Y.H.2
Lee, M.K.3
Liu, Y.H.4
Rong, Y.5
Santos, T.S.6
Wu, C.7
Xie, F.8
Nelson, R.L.9
Zhang, H.10
-
28
-
-
80053598318
-
Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis
-
Guo Y.-L., Fitz J., Schneeberger K., Ossowski S., Cao J., Weigel D. Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis. Plant Physiol 2011, 157:757-769.
-
(2011)
Plant Physiol
, vol.157
, pp. 757-769
-
-
Guo, Y.-L.1
Fitz, J.2
Schneeberger, K.3
Ossowski, S.4
Cao, J.5
Weigel, D.6
-
29
-
-
0038663127
-
A novel family in Medicago truncatula consisting of more than 300 nodule-specific genes coding for small, secreted polypeptides with conserved cysteine motifs
-
Mergaert P., Nikovics K., Kelemen Z., Maunoury N., Vaubert D., Kondorosi A., Kondorosi E. A novel family in Medicago truncatula consisting of more than 300 nodule-specific genes coding for small, secreted polypeptides with conserved cysteine motifs. Plant Physiol 2003, 132:161-173.
-
(2003)
Plant Physiol
, vol.132
, pp. 161-173
-
-
Mergaert, P.1
Nikovics, K.2
Kelemen, Z.3
Maunoury, N.4
Vaubert, D.5
Kondorosi, A.6
Kondorosi, E.7
-
30
-
-
3543042528
-
Computational identification and characterization of novel genes from legumes
-
Graham M.A., Silverstein K.A.T., Cannon S.B., VandenBosch K.A. Computational identification and characterization of novel genes from legumes. Plant Physiol 2004, 135:1179-1197.
-
(2004)
Plant Physiol
, vol.135
, pp. 1179-1197
-
-
Graham, M.A.1
Silverstein, K.A.T.2
Cannon, S.B.3
VandenBosch, K.A.4
-
31
-
-
34548017391
-
Genomic organization and evolutionary insights on GRP and NCR genes, two large nodule-specific gene families in Medicago truncatula
-
Alunni B., Kevei Z., Redondo-Nieto M., Kondorosi A., Mergaert P., Kondorosi E. Genomic organization and evolutionary insights on GRP and NCR genes, two large nodule-specific gene families in Medicago truncatula. Mol Plant Microbe Interact 2007, 20:1138-1148.
-
(2007)
Mol Plant Microbe Interact
, vol.20
, pp. 1138-1148
-
-
Alunni, B.1
Kevei, Z.2
Redondo-Nieto, M.3
Kondorosi, A.4
Mergaert, P.5
Kondorosi, E.6
-
32
-
-
84934993109
-
Plant cysteine-rich peptides that inhibit pathogen growth and control rhizobial differentiation in legume nodules
-
Maróti G., Downie J.A., Kondorosi É. Plant cysteine-rich peptides that inhibit pathogen growth and control rhizobial differentiation in legume nodules. Curr Opin Plant Biol 2015, 26:57-63.
-
(2015)
Curr Opin Plant Biol
, vol.26
, pp. 57-63
-
-
Maróti, G.1
Downie, J.A.2
Kondorosi, É.3
-
33
-
-
84942877891
-
Bradyrhizobium BclA is a peptide transporter required for bacterial differentiation in symbiosis with Aeschynomene legumes
-
Guefrachi I., Pierre O., Timchenko T., Alunni B., Barrière Q., Czernic P., Villaécija-Aguilar J.-A., Verly C., Bourge M., Fardoux J., et al. Bradyrhizobium BclA is a peptide transporter required for bacterial differentiation in symbiosis with Aeschynomene legumes. Mol Plant-Microbe Interact 2015, 10.1094/MPMI-04-15-0094-R.
-
(2015)
Mol Plant-Microbe Interact
-
-
Guefrachi, I.1
Pierre, O.2
Timchenko, T.3
Alunni, B.4
Barrière, Q.5
Czernic, P.6
Villaécija-Aguilar, J.-A.7
Verly, C.8
Bourge, M.9
Fardoux, J.10
-
34
-
-
84875639791
-
Regulatory patterns of a large family of defensin-like genes expressed in nodules of Medicago truncatula
-
Nallu S., Silverstein K.A.T., Samac D.A., Bucciarelli B., Vance C.P., VandenBosch K.A. Regulatory patterns of a large family of defensin-like genes expressed in nodules of Medicago truncatula. PLoS ONE 2013, 8:e60355.
-
(2013)
PLoS ONE
, vol.8
, pp. e60355
-
-
Nallu, S.1
Silverstein, K.A.T.2
Samac, D.A.3
Bucciarelli, B.4
Vance, C.P.5
VandenBosch, K.A.6
-
35
-
-
77649220369
-
Plant peptides govern terminal differentiation of bacteria in symbiosis
-
Van de Velde W., Zehirov G., Szatmari A., Debreczeny M., Ishihara H., Kevei Z., Farkas A., Mikulass K., Nagy A., Tiricz H., et al. Plant peptides govern terminal differentiation of bacteria in symbiosis. Science 2010, 327:1122-1126.
-
(2010)
Science
, vol.327
, pp. 1122-1126
-
-
Van de Velde, W.1
Zehirov, G.2
Szatmari, A.3
Debreczeny, M.4
Ishihara, H.5
Kevei, Z.6
Farkas, A.7
Mikulass, K.8
Nagy, A.9
Tiricz, H.10
-
36
-
-
80055041906
-
Protection of Sinorhizobium against host cysteine-rich antimicrobial peptides is critical for symbiosis
-
Haag A.F., Baloban M., Sani M., Kerscher B., Pierre O., Farkas A., Longhi R., Boncompagni E., Hérouart D., Dall'angelo S., et al. Protection of Sinorhizobium against host cysteine-rich antimicrobial peptides is critical for symbiosis. PLoS Biol 2011, 9:e1001169.
-
(2011)
PLoS Biol
, vol.9
, pp. e1001169
-
-
Haag, A.F.1
Baloban, M.2
Sani, M.3
Kerscher, B.4
Pierre, O.5
Farkas, A.6
Longhi, R.7
Boncompagni, E.8
Hérouart, D.9
Dall'angelo, S.10
-
37
-
-
0000354617
-
The Arabidopsis Genome Initiative: analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative: analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
38
-
-
40949127893
-
Genome-wide identification of NBS resistance genes in Populus trichocarpa
-
Kohler A., Rinaldi C., Duplessis S., Baucher M., Geelen D., Duchaussoy F., Meyers B.C., Boerjan W., Martin F. Genome-wide identification of NBS resistance genes in Populus trichocarpa. Plant Mol Biol 2008, 66:619-636.
-
(2008)
Plant Mol Biol
, vol.66
, pp. 619-636
-
-
Kohler, A.1
Rinaldi, C.2
Duplessis, S.3
Baucher, M.4
Geelen, D.5
Duchaussoy, F.6
Meyers, B.C.7
Boerjan, W.8
Martin, F.9
-
39
-
-
3042575125
-
Genome-wide identification of NBS genes in japonica rice reveals significant expansion of divergent non-TIR NBS-LRR genes
-
Zhou T., Wang Y., Chen J.Q., Araki H., Jing Z., Jiang K., Shen J., Tian D. Genome-wide identification of NBS genes in japonica rice reveals significant expansion of divergent non-TIR NBS-LRR genes. Mol Genet Genomics 2004, 271:402-415.
-
(2004)
Mol Genet Genomics
, vol.271
, pp. 402-415
-
-
Zhou, T.1
Wang, Y.2
Chen, J.Q.3
Araki, H.4
Jing, Z.5
Jiang, K.6
Shen, J.7
Tian, D.8
-
40
-
-
84859498261
-
Sequencing Consortium TPG: genome sequence and analysis of the tuber crop potato
-
Sequencing Consortium TPG: genome sequence and analysis of the tuber crop potato. Nature 2011, 475:189-195.
-
(2011)
Nature
, vol.475
, pp. 189-195
-
-
-
41
-
-
84355166513
-
The Medicago genome provides insight into the evolution of rhizobial symbioses
-
Young N.D., Debellé F., Oldroyd G.E.D., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H., et al. The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature 2011, 480:520-524.
-
(2011)
Nature
, vol.480
, pp. 520-524
-
-
Young, N.D.1
Debellé, F.2
Oldroyd, G.E.D.3
Geurts, R.4
Cannon, S.B.5
Udvardi, M.K.6
Benedito, V.A.7
Mayer, K.F.X.8
Gouzy, J.9
Schoof, H.10
-
42
-
-
84942371526
-
Exploring the rice dispensable genome using a metagenome-like assembly strategy
-
Yao W., Li G., Zhao H., Wang G., Lian X., Xie W. Exploring the rice dispensable genome using a metagenome-like assembly strategy. Genome Biol 2015, 16:187.
-
(2015)
Genome Biol
, vol.16
, pp. 187
-
-
Yao, W.1
Li, G.2
Zhao, H.3
Wang, G.4
Lian, X.5
Xie, W.6
-
43
-
-
84938423867
-
Assembly and diploid architecture of an individual human genome via single-molecule technologies
-
Pendleton M., Sebra R., Pang A.W.C., Ummat A., Franzen O., Rausch T., Stütz A.M., Stedman W., Anantharaman T., Hastie A., et al. Assembly and diploid architecture of an individual human genome via single-molecule technologies. Nat Methods 2015, 12:780-786.
-
(2015)
Nat Methods
, vol.12
, pp. 780-786
-
-
Pendleton, M.1
Sebra, R.2
Pang, A.W.C.3
Ummat, A.4
Franzen, O.5
Rausch, T.6
Stütz, A.M.7
Stedman, W.8
Anantharaman, T.9
Hastie, A.10
-
44
-
-
84864883566
-
Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly
-
Lam ET1, Hastie A., Lin C., Ehrlich D., Das S.K., Austin M.D., Deshpande P., Cao H., Nagarajan N., Xiao M., Kwok P.Y. Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly. Nat Biotechnol 2012, 30:771-776.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 771-776
-
-
Lam, ET11
Hastie, A.2
Lin, C.3
Ehrlich, D.4
Das, S.K.5
Austin, M.D.6
Deshpande, P.7
Cao, H.8
Nagarajan, N.9
Xiao, M.10
Kwok, P.Y.11
-
45
-
-
84890034912
-
Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
-
Burton J.N., Adey A., Patwardhan R.P., Qiu R., Kitzman J.O., Shendure J. Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions. Nat Biotechnol 2013, 31:1119-1125.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 1119-1125
-
-
Burton, J.N.1
Adey, A.2
Patwardhan, R.P.3
Qiu, R.4
Kitzman, J.O.5
Shendure, J.6
-
46
-
-
84929516809
-
-
Putnam N.H., O'Connell B., Stites J.C., Rice B.J., Fields A., Hartley P.D., Sugnet C.W., Haussler D., Rokhsar D.S., Green R.E. Chromosome-scale shotgun assembly using an in vitro method for long-range linkage 2015, arxiv:1502.05331.
-
(2015)
Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
-
-
Putnam, N.H.1
O'Connell, B.2
Stites, J.C.3
Rice, B.J.4
Fields, A.5
Hartley, P.D.6
Sugnet, C.W.7
Haussler, D.8
Rokhsar, D.S.9
Green, R.E.10
-
47
-
-
84955136918
-
A synteny-based draft genome sequence of the forage grass Lolium perenne
-
Byrne S.L., Nagy I., Pfeifer M., Armstead I., Swain S., Studer B., Mayer K., Campbell J.D., Czaban A., Hentrup S., et al. A synteny-based draft genome sequence of the forage grass Lolium perenne. Plant J 2015, 10.1111/tpj.13037.
-
(2015)
Plant J
-
-
Byrne, S.L.1
Nagy, I.2
Pfeifer, M.3
Armstead, I.4
Swain, S.5
Studer, B.6
Mayer, K.7
Campbell, J.D.8
Czaban, A.9
Hentrup, S.10
-
48
-
-
84869814079
-
Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology
-
English A.C., Richards S., Han Y., Wang M., Vee V., Qu J., Qin X., Muzny D.M., Reid J.G., Worley K.C., et al. Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology. PLoS ONE 2012, 7:e47768.
-
(2012)
PLoS ONE
, vol.7
, pp. e47768
-
-
English, A.C.1
Richards, S.2
Han, Y.3
Wang, M.4
Vee, V.5
Qu, J.6
Qin, X.7
Muzny, D.M.8
Reid, J.G.9
Worley, K.C.10
|