-
1
-
-
28844490057
-
The effect of hygienic treatment on the microbial flora of biowaste at biogas plants
-
PID: 16297957, COI: 1:CAS:528:DC%2BD2MXht12jtL%2FF
-
Bagge E, Sahlstrom L, Albihn A (2005) The effect of hygienic treatment on the microbial flora of biowaste at biogas plants. Water Res 39(20):4879–4886
-
(2005)
Water Res
, vol.39
, Issue.20
, pp. 4879-4886
-
-
Bagge, E.1
Sahlstrom, L.2
Albihn, A.3
-
2
-
-
18244367102
-
Strategies for changing temperature from mesophilic to thermophilic conditions in anaerobic CSTR reactors treating sewage sludge
-
PID: 15878019, COI: 1:CAS:528:DC%2BD2MXjvVCksr8%3D
-
Bouskova A, Dohanyos M, Schmidt JE, Angelidaki I (2005) Strategies for changing temperature from mesophilic to thermophilic conditions in anaerobic CSTR reactors treating sewage sludge. Water Res 39(8):1481–1488
-
(2005)
Water Res
, vol.39
, Issue.8
, pp. 1481-1488
-
-
Bouskova, A.1
Dohanyos, M.2
Schmidt, J.E.3
Angelidaki, I.4
-
3
-
-
0242720537
-
Acclimation of mesophilic anaerobic sludge to thermophilic conditions: PCR genera detection methodology
-
PID: 14640203, COI: 1:CAS:528:DC%2BD3sXpvFemsL0%3D
-
Cabirol N, Fernandez FJ, Mendoza L, Noyola A (2003) Acclimation of mesophilic anaerobic sludge to thermophilic conditions: PCR genera detection methodology. Water Sci Technol 48:81–86
-
(2003)
Water Sci Technol
, vol.48
, pp. 81-86
-
-
Cabirol, N.1
Fernandez, F.J.2
Mendoza, L.3
Noyola, A.4
-
4
-
-
75249107844
-
PyNAST: a flexible tool for aligning sequences to a template alignment
-
COI: 1:CAS:528:DC%2BC3cXntlGqug%3D%3D
-
Caporaso JG, Bittinger K, Bushman FD, DeSantis TZ, Andersen GL, Knight R (2010a) PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics (Oxford, England) 26(2):266–267
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, Issue.2
, pp. 266-267
-
-
Caporaso, J.G.1
Bittinger, K.2
Bushman, F.D.3
DeSantis, T.Z.4
Andersen, G.L.5
Knight, R.6
-
5
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
COI: 1:CAS:528:DC%2BC3cXksFalurg%3D
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pẽa AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R (2010b) QIIME allows analysis of high-throughput community sequencing data. Nat Meth 7(5):335–336
-
(2010)
Nat Meth
, vol.7
, Issue.5
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pẽa, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
6
-
-
8144228834
-
Comparison of different primer sets for use in automated ribosomal intergenic spacer analysis of complex bacterial communities
-
PID: 15466561, COI: 1:CAS:528:DC%2BD2cXosl2hs7o%3D
-
Cardinale M, Brusetti L, Quatrini P, Borin S, Puglia AM, Rizzi A, Zanardini E, Sorlini C, Corselli C, Daffonchio D (2004) Comparison of different primer sets for use in automated ribosomal intergenic spacer analysis of complex bacterial communities. Appl Environ Microbiol 70(10):6147–6156
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.10
, pp. 6147-6156
-
-
Cardinale, M.1
Brusetti, L.2
Quatrini, P.3
Borin, S.4
Puglia, A.M.5
Rizzi, A.6
Zanardini, E.7
Sorlini, C.8
Corselli, C.9
Daffonchio, D.10
-
7
-
-
84896725946
-
Co-inoculating ruminal content neither provides active hydrolytic microbes nor improves methanization of (1)(3)C-cellulose in batch digesters
-
PID: 24219327, COI: 1:CAS:528:DC%2BC2cXjsFGgsLo%3D
-
Chapleur O, Bize A, Serain T, Mazeas L, Bouchez T (2014) Co-inoculating ruminal content neither provides active hydrolytic microbes nor improves methanization of (1)(3)C-cellulose in batch digesters. FEMS Microbiol Ecol 87(3):616–629. doi:10.1111/1574-6941.12249
-
(2014)
FEMS Microbiol Ecol
, vol.87
, Issue.3
, pp. 616-629
-
-
Chapleur, O.1
Bize, A.2
Serain, T.3
Mazeas, L.4
Bouchez, T.5
-
8
-
-
0033012295
-
Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil
-
PID: 10347011, COI: 1:CAS:528:DyaK1MXjs12gs7w%3D
-
Chin KJ, Lukow T, Conrad R (1999) Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil. Appl Environ Microbiol 65(6):2341–2349
-
(1999)
Appl Environ Microbiol
, vol.65
, Issue.6
, pp. 2341-2349
-
-
Chin, K.J.1
Lukow, T.2
Conrad, R.3
-
9
-
-
36049011206
-
Effect of temperature on the anaerobic digestion of palm oil mill effluent
-
COI: 1:CAS:528:DC%2BD2sXosVahtb0%3D
-
Choorit W, Wisarnwan P (2007) Effect of temperature on the anaerobic digestion of palm oil mill effluent. Electron J Biotechnol 10(3):376–385
-
(2007)
Electron J Biotechnol
, vol.10
, Issue.3
, pp. 376-385
-
-
Choorit, W.1
Wisarnwan, P.2
-
10
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Farris RJ, Kulam-Syed-Mohideen AS, McGarrell DM, Marsh T, Garrity GM, Tiedje JM (2009) The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37(SUPPL. 1):141–145
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 141-145
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
Farris, R.J.6
Kulam-Syed-Mohideen, A.S.7
McGarrell, D.M.8
Marsh, T.9
Garrity, G.M.10
Tiedje, J.M.11
-
11
-
-
67649995068
-
Functional and structural response of the methanogenic microbial community in rice field soil to temperature change
-
PID: 19508556, COI: 1:CAS:528:DC%2BD1MXptlygsr8%3D
-
Conrad R, Klose M, Noll M (2009) Functional and structural response of the methanogenic microbial community in rice field soil to temperature change. Environ Microbiol 11(7):1844–1853
-
(2009)
Environ Microbiol
, vol.11
, Issue.7
, pp. 1844-1853
-
-
Conrad, R.1
Klose, M.2
Noll, M.3
-
12
-
-
70349243332
-
Influence of temperature on the hydrolysis, acidogenesis and methanogenesis in mesophilic anaerobic digestion: parameter identification and modeling application
-
PID: 19587397, COI: 1:CAS:528:DC%2BD1MXhtVaisbvP
-
Donoso-Bravo A, Retamal C, Carballa M, Ruiz-Filippi G, Chamy R (2009) Influence of temperature on the hydrolysis, acidogenesis and methanogenesis in mesophilic anaerobic digestion: parameter identification and modeling application. Water Sci Technol 60(1):9–17. doi:10.2166/wst.2009.316
-
(2009)
Water Sci Technol
, vol.60
, Issue.1
, pp. 9-17
-
-
Donoso-Bravo, A.1
Retamal, C.2
Carballa, M.3
Ruiz-Filippi, G.4
Chamy, R.5
-
13
-
-
0032879764
-
Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities
-
PID: 10508099, COI: 1:CAS:528:DyaK1MXms1Oit7o%3D
-
Fisher MM, Triplett EW (1999) Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl Environ Microbiol 65(10):4630–4636
-
(1999)
Appl Environ Microbiol
, vol.65
, Issue.10
, pp. 4630-4636
-
-
Fisher, M.M.1
Triplett, E.W.2
-
14
-
-
0018901105
-
Biosynthesis of bacterial cellulose from D-glucose uniformly enriched in 13C
-
PID: 7358044, COI: 1:CAS:528:DyaL3cXht1Cls70%3D
-
Gagnaire DY, Taravel FR (1980) Biosynthesis of bacterial cellulose from D-glucose uniformly enriched in 13C. Eur J Biochem 103(1):133–143
-
(1980)
Eur J Biochem
, vol.103
, Issue.1
, pp. 133-143
-
-
Gagnaire, D.Y.1
Taravel, F.R.2
-
15
-
-
0033929777
-
Microdiversity of uncultured marine prokaryotes: the SAR11 cluster and the marine Archaea of group I
-
PID: 10886656
-
García-Martínez J, Rodríguez-Valera F (2000) Microdiversity of uncultured marine prokaryotes: the SAR11 cluster and the marine Archaea of group I. Mol Ecol 9(7):935–948. doi:10.1046/j.1365-294X.2000.00953.x
-
(2000)
Mol Ecol
, vol.9
, Issue.7
, pp. 935-948
-
-
García-Martínez, J.1
Rodríguez-Valera, F.2
-
16
-
-
33847732738
-
Effect of process temperature on bacterial and archaeal communities in two methanogenic bioreactors treating organic household waste
-
PID: 17381521
-
Levén L, Eriksson ARB, Schnürer A (2007) Effect of process temperature on bacterial and archaeal communities in two methanogenic bioreactors treating organic household waste. FEMS Microbiol Ecol 59(3):683–693
-
(2007)
FEMS Microbiol Ecol
, vol.59
, Issue.3
, pp. 683-693
-
-
Levén, L.1
Eriksson, A.R.B.2
Schnürer, A.3
-
17
-
-
63849266008
-
Insights into networks of functional microbes catalysing methanization of cellulose under mesophilic conditions
-
PID: 19128320, COI: 1:CAS:528:DC%2BD1MXltlSltrY%3D
-
Li T, Mazéas L, Sghir A, Leblon G, Bouchez T (2009) Insights into networks of functional microbes catalysing methanization of cellulose under mesophilic conditions. Environ Microbiol 11(4):889–904. doi:10.1111/j.1462-2920.2008.01810.x
-
(2009)
Environ Microbiol
, vol.11
, Issue.4
, pp. 889-904
-
-
Li, T.1
Mazéas, L.2
Sghir, A.3
Leblon, G.4
Bouchez, T.5
-
18
-
-
44649148426
-
New data on temperature optimum and temperature changes in energy crop digesters
-
PID: 18343659, COI: 1:CAS:528:DC%2BD1cXms1ynsrs%3D
-
Lindorfer H, Waltenberger R, Kollner K, Braun R, Kirchmayr R (2008) New data on temperature optimum and temperature changes in energy crop digesters. Bioresour Technol 99(15):7011–7019
-
(2008)
Bioresour Technol
, vol.99
, Issue.15
, pp. 7011-7019
-
-
Lindorfer, H.1
Waltenberger, R.2
Kollner, K.3
Braun, R.4
Kirchmayr, R.5
-
19
-
-
0036795787
-
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
-
PID: 12324358, COI: 1:CAS:528:DC%2BD38XnvFClu7g%3D
-
Loy A, Lehner A, Lee N, Adamczyk J, Meier H, Ernst J, Schleifer KH, Wagner M (2002) Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Appl Environ Microbiol 68(10):5064–5081. doi:10.1128/aem.68.10.5064-5081.2002
-
(2002)
Appl Environ Microbiol
, vol.68
, Issue.10
, pp. 5064-5081
-
-
Loy, A.1
Lehner, A.2
Lee, N.3
Adamczyk, J.4
Meier, H.5
Ernst, J.6
Schleifer, K.H.7
Wagner, M.8
-
20
-
-
0036714783
-
Microbial cellulose utilization: fundamentals and biotechnology
-
PID: 12209002, COI: 1:CAS:528:DC%2BD38XnsFOitrk%3D
-
Lynd LR, Weimer PJ, Van Zyl WH, Pretorius IS (2002) Microbial cellulose utilization: fundamentals and biotechnology. Microbiol Mol Biol Rev 66(3):506–577
-
(2002)
Microbiol Mol Biol Rev
, vol.66
, Issue.3
, pp. 506-577
-
-
Lynd, L.R.1
Weimer, P.J.2
Van Zyl, W.H.3
Pretorius, I.S.4
-
21
-
-
2442528190
-
Reactor performance and microbial community dynamics during anaerobic biological treatment of wastewaters at 16–37 °C
-
PID: 19712306, COI: 1:CAS:528:DC%2BD2cXktF2kurg%3D
-
McHugh S, Carton M, Collins G, O’Flaherty V (2004) Reactor performance and microbial community dynamics during anaerobic biological treatment of wastewaters at 16–37 °C. FEMS Microbiol Ecol 48(3):369–378
-
(2004)
FEMS Microbiol Ecol
, vol.48
, Issue.3
, pp. 369-378
-
-
McHugh, S.1
Carton, M.2
Collins, G.3
O’Flaherty, V.4
-
22
-
-
68949116293
-
StatFingerprints: a friendly graphical interface program for processing and analysis of microbial fingerprint profiles
-
PID: 21564907, COI: 1:STN:280:DC%2BC3Mrgs1yrsA%3D%3D
-
Michelland RJ, Dejean S, Combes S, Fortun-Lamothe L, Cauquil L (2009) StatFingerprints: a friendly graphical interface program for processing and analysis of microbial fingerprint profiles. Mol Ecol Resour 9(5):1359–1363
-
(2009)
Mol Ecol Resour
, vol.9
, Issue.5
, pp. 1359-1363
-
-
Michelland, R.J.1
Dejean, S.2
Combes, S.3
Fortun-Lamothe, L.4
Cauquil, L.5
-
23
-
-
77954415974
-
Effect of temperature change on the composition of the bacterial and archaeal community potentially involved in the turnover of acetate and propionate in methanogenic rice field soil
-
PID: 20491920, COI: 1:CAS:528:DC%2BC3cXhtVGltLbP
-
Noll M, Klose M, Conrad R (2010) Effect of temperature change on the composition of the bacterial and archaeal community potentially involved in the turnover of acetate and propionate in methanogenic rice field soil. FEMS Microbiol Ecol 73(2):215–225
-
(2010)
FEMS Microbiol Ecol
, vol.73
, Issue.2
, pp. 215-225
-
-
Noll, M.1
Klose, M.2
Conrad, R.3
-
24
-
-
84918832993
-
Temperature-dependent transformation of biogas-producing microbial communities points to the increased importance of hydrogenotrophic methanogenesis under thermophilic operation
-
PID: 25481804, COI: 1:CAS:528:DC%2BC2cXitVWhsLjL
-
Pap B, Györkei Á, Boboescu IZ, Nagy IK, Bíró T, Kondorosi É, Maróti G (2015) Temperature-dependent transformation of biogas-producing microbial communities points to the increased importance of hydrogenotrophic methanogenesis under thermophilic operation. Bioresour Technol 177:375–380. doi:10.1016/j.biortech.2014.11.021
-
(2015)
Bioresour Technol
, vol.177
, pp. 375-380
-
-
Pap, B.1
Györkei, Á.2
Boboescu, I.Z.3
Nagy, I.K.4
Bíró, T.5
Kondorosi, É.6
Maróti, G.7
-
25
-
-
0347948605
-
Long-term effects of operating temperature and sulphate addition on the methanogenic community structure of anaerobic hybrid reactors
-
PID: 14723931, COI: 1:CAS:528:DC%2BD2cXit1WjtA%3D%3D
-
Pender S, Toomey M, Carton M, Eardly D, Patching JW, Colleran E, O’Flaherty V (2004) Long-term effects of operating temperature and sulphate addition on the methanogenic community structure of anaerobic hybrid reactors. Water Res 38(3):619–630
-
(2004)
Water Res
, vol.38
, Issue.3
, pp. 619-630
-
-
Pender, S.1
Toomey, M.2
Carton, M.3
Eardly, D.4
Patching, J.W.5
Colleran, E.6
O’Flaherty, V.7
-
26
-
-
78049434937
-
Replicate or lie
-
PID: 20438583, COI: 1:CAS:528:DC%2BC3cXhtVegsLjJ
-
Prosser JI (2010) Replicate or lie. Environ Microbiol 12(7):1806–1810. doi:10.1111/j.1462-2920.2010.02201.x
-
(2010)
Environ Microbiol
, vol.12
, Issue.7
, pp. 1806-1810
-
-
Prosser, J.I.1
-
27
-
-
0034628432
-
Stable-isotope probing as a tool in microbial ecology
-
PID: 10688198, COI: 1:CAS:528:DC%2BD3cXht1Oqt7w%3D
-
Radajewski S, Ineson P, Parekh NR, Murrell JC (2000) Stable-isotope probing as a tool in microbial ecology. Nature 403(6770):646–649
-
(2000)
Nature
, vol.403
, Issue.6770
, pp. 646-649
-
-
Radajewski, S.1
Ineson, P.2
Parekh, N.R.3
Murrell, J.C.4
-
28
-
-
17144466202
-
Mesophilic syntrophic acetate oxidation during methane formation in biogas reactors
-
Schnürer A, Zellner G, Svensson BH (1999) Mesophilic syntrophic acetate oxidation during methane formation in biogas reactors. FEMS Microbiol Ecol 29(3):249–261
-
(1999)
FEMS Microbiol Ecol
, vol.29
, Issue.3
, pp. 249-261
-
-
Schnürer, A.1
Zellner, G.2
Svensson, B.H.3
-
29
-
-
77956683209
-
Evaluation of the bacterial diversity of pressure ulcers using bTEFAP pyrosequencing
-
Smith DM, Snow DE, Rees E, Zischkau AM, Hanson JD, Wolcott RD, Sun Y, White J, Kumar S, Dowd SE (2010) Evaluation of the bacterial diversity of pressure ulcers using bTEFAP pyrosequencing. BMC Med Genet 3(41):1
-
(2010)
BMC Med Genet
, vol.3
, Issue.41
, pp. 1
-
-
Smith, D.M.1
Snow, D.E.2
Rees, E.3
Zischkau, A.M.4
Hanson, J.D.5
Wolcott, R.D.6
Sun, Y.7
White, J.8
Kumar, S.9
Dowd, S.E.10
-
30
-
-
0001878986
-
ADE-4: a multivariate analysis and graphical display software
-
Thioulouse J, Chessel D, Dole’dec S, Olivier J-M (1997) ADE-4: a multivariate analysis and graphical display software. Stat Comput 7(1):75–83. doi:10.1023/A:1018513530268
-
(1997)
Stat Comput
, vol.7
, Issue.1
, pp. 75-83
-
-
Thioulouse, J.1
Chessel, D.2
Dole’dec, S.3
Olivier, J.-M.4
-
31
-
-
0030872771
-
High-rate anaerobic wastewater treatment under psychrophilic and thermophilic conditions
-
Van Lier JB, Rebac S, Lettinga G (1997) High-rate anaerobic wastewater treatment under psychrophilic and thermophilic conditions. Water Sci Technol 35:199–206
-
(1997)
Water Sci Technol
, vol.35
, pp. 199-206
-
-
Van Lier, J.B.1
Rebac, S.2
Lettinga, G.3
-
32
-
-
0035110292
-
New perspectives in anaerobic digestion
-
PID: 11379079
-
Van Lier JB, Tilche A, Ahring BK, Macarie H, Moletta R, Dohanyos M, Hulshoff Pol LW, Lens P, Verstraete W (2001) New perspectives in anaerobic digestion. Water Sci Technol 43:1–18
-
(2001)
Water Sci Technol
, vol.43
, pp. 1-18
-
-
Van Lier, J.B.1
Tilche, A.2
Ahring, B.K.3
Macarie, H.4
Moletta, R.5
Dohanyos, M.6
Hulshoff Pol, L.W.7
Lens, P.8
Verstraete, W.9
-
33
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
PID: 17586664, COI: 1:CAS:528:DC%2BD2sXpsleqtrc%3D
-
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73(16):5261–5267
-
(2007)
Appl Environ Microbiol
, vol.73
, Issue.16
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
34
-
-
33644963973
-
Diversity and ubiquity of thermophilic methanogenic archaea in temperate anoxic soils
-
PID: 16478446, COI: 1:CAS:528:DC%2BD28XjsFOqsLg%3D
-
Wu XL, Friedrich MW, Conrad R (2006) Diversity and ubiquity of thermophilic methanogenic archaea in temperate anoxic soils. Environ Microbiol 8(3):394–404
-
(2006)
Environ Microbiol
, vol.8
, Issue.3
, pp. 394-404
-
-
Wu, X.L.1
Friedrich, M.W.2
Conrad, R.3
-
35
-
-
84969431672
-
Syntrophic acetate oxidation and “reversible acetogenesis.” In: “Acetogenesis”. Chapman & Hall
-
Zinder SH (1994) Syntrophic acetate oxidation and “reversible acetogenesis.” In: “Acetogenesis”. Chapman & Hall, New York:386–415
-
(1994)
New York:386–415
-
-
Zinder, S.H.1
|