메뉴 건너뛰기




Volumn 30, Issue 1, 2016, Pages 64-77

p53 genes function to restrain mobile elements

Author keywords

Drosophila; Human cancers; Mouse cancer models; p53; PiRNAs; Retrotransposons; Zebrafish

Indexed keywords

PIWI INTERACTING RNA; PROTEIN P53; RETROPOSON;

EID: 84953426050     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.266098.115     Document Type: Article
Times cited : (142)

References (64)
  • 1
    • 36749037521 scopus 로고    scopus 로고
    • The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
    • Aravin AA, Hannon GJ, Brennecke J. 2007. The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science 318: 761-764.
    • (2007) Science , vol.318 , pp. 761-764
    • Aravin, A.A.1    Hannon, G.J.2    Brennecke, J.3
  • 2
    • 57049092878 scopus 로고    scopus 로고
    • The take and give between retrotransposable elements and their hosts
    • Beauregard A, Curcio MJ, Belfort M. 2008. The take and give between retrotransposable elements and their hosts. Annu Rev Genet 42: 587-617.
    • (2008) Annu Rev Genet , vol.42 , pp. 587-617
    • Beauregard, A.1    Curcio, M.J.2    Belfort, M.3
  • 7
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • The Cancer Genome Atlas Network. 2012. Comprehensive molecular characterization of human colon and rectal cancer. Nature 487: 330-337.
    • (2012) Nature , vol.487 , pp. 330-337
  • 8
    • 84891829271 scopus 로고    scopus 로고
    • L1 retrotransposons, cancer stem cells and oncogenesis
    • Carreira PE, Richardson SR, Faulkner GJ. 2014. L1 retrotransposons, cancer stem cells and oncogenesis. FEBS J 281: 63-73.
    • (2014) FEBS J , vol.281 , pp. 63-73
    • Carreira, P.E.1    Richardson, S.R.2    Faulkner, G.J.3
  • 9
    • 80051807498 scopus 로고    scopus 로고
    • piRNAs, transposon silencing, and germline genome integrity
    • Castaneda J, Genzor P, Bortvin A. 2011. piRNAs, transposon silencing, and germline genome integrity. Mutat Res 714: 95-104.
    • (2011) Mutat Res , vol.714 , pp. 95-104
    • Castaneda, J.1    Genzor, P.2    Bortvin, A.3
  • 10
    • 0035578385 scopus 로고    scopus 로고
    • Apoptosis in the developing zebrafish embryo
    • Cole LK, Ross LS. 2001. Apoptosis in the developing zebrafish embryo. Dev Biol 240: 123-142.
    • (2001) Dev Biol , vol.240 , pp. 123-142
    • Cole, L.K.1    Ross, L.S.2
  • 14
    • 84904086862 scopus 로고    scopus 로고
    • Transcriptional landscape of repetitive elements in normal and cancer human cells
    • Criscione SW, Zhang Y, Thompson W, Sedivy JM, Neretti N. 2014. Transcriptional landscape of repetitive elements in normal and cancer human cells. BMC Genomics 15: 583.
    • (2014) BMC Genomics , vol.15 , pp. 583
    • Criscione, S.W.1    Zhang, Y.2    Thompson, W.3    Sedivy, J.M.4    Neretti, N.5
  • 15
    • 84878851966 scopus 로고    scopus 로고
    • A transcriptomewide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway
    • Czech B, Preall JB, McGinn J, Hannon GJ. 2013. A transcriptomewide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway. Mol Cell 50: 749-761.
    • (2013) Mol Cell , vol.50 , pp. 749-761
    • Czech, B.1    Preall, J.B.2    McGinn, J.3    Hannon, G.J.4
  • 17
    • 2442554169 scopus 로고    scopus 로고
    • Identification of autonomous IAP LTR retrotransposons mobile in mammalian cells
    • Dewannieux M, Dupressoir A, Harper F, Pierron G, Heidmann T. 2004. Identification of autonomous IAP LTR retrotransposons mobile in mammalian cells. Nat Genet 36: 534-539.
    • (2004) Nat Genet , vol.36 , pp. 534-539
    • Dewannieux, M.1    Dupressoir, A.2    Harper, F.3    Pierron, G.4    Heidmann, T.5
  • 20
    • 0009969062 scopus 로고    scopus 로고
    • Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition
    • Feng Q, Moran JV, Kazazian HH Jr, Boeke JD. 1996. Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition. Cell 87: 905-916.
    • (1996) Cell , vol.87 , pp. 905-916
    • Feng, Q.1    Moran, J.V.2    Kazazian, H.H.3    Boeke, J.D.4
  • 23
    • 84926205298 scopus 로고    scopus 로고
    • RNA-mediated epigenetic regulation of gene expression
    • Holoch D, Moazed D. 2015. RNA-mediated epigenetic regulation of gene expression. Nat Rev Genet 16: 71-84.
    • (2015) Nat Rev Genet , vol.16 , pp. 71-84
    • Holoch, D.1    Moazed, D.2
  • 24
    • 80053048357 scopus 로고    scopus 로고
    • Regulation of fertility by the p53 family members
    • Hu W, Zheng T, Wang J. 2011. Regulation of fertility by the p53 family members. Genes Cancer 2: 420-430.
    • (2011) Genes Cancer , vol.2 , pp. 420-430
    • Hu, W.1    Zheng, T.2    Wang, J.3
  • 25
    • 0016054787 scopus 로고
    • Transplantation of posterior polar plasm in Drosophila. Induction of germ cells at the anterior pole of the egg
    • Illmensee K, Mahowald AP. 1974. Transplantation of posterior polar plasm in Drosophila. Induction of germ cells at the anterior pole of the egg. Proc Natl Acad Sci 71: 1016-1020.
    • (1974) Proc Natl Acad Sci , vol.71 , pp. 1016-1020
    • Illmensee, K.1    Mahowald, A.P.2
  • 26
    • 0034284437 scopus 로고    scopus 로고
    • Repbase update: A database and an electronic journal of repetitive elements
    • Jurka J. 2000. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet 16: 418-420.
    • (2000) Trends Genet , vol.16 , pp. 418-420
    • Jurka, J.1
  • 28
    • 78649679968 scopus 로고    scopus 로고
    • piRNAs, transposon silencing, and Drosophila germline development
    • Khurana JS, Theurkauf W. 2010. piRNAs, transposon silencing, and Drosophila germline development. J Cell Biol 191: 905- 913.
    • (2010) J Cell Biol , vol.191 , pp. 905-913
    • Khurana, J.S.1    Theurkauf, W.2
  • 29
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL. 2013. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 14: R36.
    • (2013) Genome Biol , vol.14
    • Kim, D.1    Pertea, G.2    Trapnell, C.3    Pimentel, H.4    Kelley, R.5    Salzberg, S.L.6
  • 31
    • 0028694318 scopus 로고
    • Germ plasm formation and germ cell determination in Drosophila
    • Lehmann R, Ephrussi A. 1994. Germ plasm formation and germ cell determination in Drosophila. Ciba Found Symp 182: 282-296.
    • (1994) Ciba Found Symp , vol.182 , pp. 282-296
    • Lehmann, R.1    Ephrussi, A.2
  • 32
    • 70349442548 scopus 로고    scopus 로고
    • The first 30 years of p53: Growing ever more complex
    • Levine AJ, Oren M. 2009. The first 30 years of p53: growing ever more complex. Nat Rev Cancer 9: 749-758.
    • (2009) Nat Rev Cancer , vol.9 , pp. 749-758
    • Levine, A.J.1    Oren, M.2
  • 34
    • 84887571721 scopus 로고    scopus 로고
    • A p53 enhancer region regulates target genes through chromatin conformations in cis and in trans
    • Link N, Kurtz P, O'Neal M, Garcia-Hughes G, Abrams JM. 2013. A p53 enhancer region regulates target genes through chromatin conformations in cis and in trans. Genes Dev 27: 2433- 2438.
    • (2013) Genes Dev , vol.27 , pp. 2433-2438
    • Link, N.1    Kurtz, P.2    O'Neal, M.3    Garcia-Hughes, G.4    Abrams, J.M.5
  • 35
    • 70349445170 scopus 로고    scopus 로고
    • p53 ancestry: Gazing through an evolutionary lens
    • Lu WJ, Amatruda JF, Abrams JM. 2009. p53 ancestry: gazing through an evolutionary lens. Nat Rev Cancer 9: 758-762.
    • (2009) Nat Rev Cancer , vol.9 , pp. 758-762
    • Lu, W.J.1    Amatruda, J.F.2    Abrams, J.M.3
  • 36
    • 77953236291 scopus 로고    scopus 로고
    • Meiotic recombination provokes functional activation of the p53 regulatory network
    • Lu WJ, Chapo J, Roig I, Abrams JM. 2010. Meiotic recombination provokes functional activation of the p53 regulatory network. Science 328: 1278-1281.
    • (2010) Science , vol.328 , pp. 1278-1281
    • Lu, W.J.1    Chapo, J.2    Roig, I.3    Abrams, J.M.4
  • 38
    • 60149098474 scopus 로고    scopus 로고
    • Small RNAs as guardians of the genome
    • Malone CD, Hannon GJ. 2009. Small RNAs as guardians of the genome. Cell 136: 656-668.
    • (2009) Cell , vol.136 , pp. 656-668
    • Malone, C.D.1    Hannon, G.J.2
  • 39
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from highthroughput sequencing reads
    • Martin M. 2011. Cutadapt removes adapter sequences from highthroughput sequencing reads. EMBnet.J 17: 10-12.
    • (2011) EMBnet.J , vol.17 , pp. 10-12
    • Martin, M.1
  • 40
    • 0032530197 scopus 로고    scopus 로고
    • mei-W68 in Drosophila melanogaster encodes a Spo11 homolog: Evidence that the mechanism for initiating meiotic recombination is conserved
    • McKim KS, Hayashi-Hagihara A. 1998. mei-W68 in Drosophila melanogaster encodes a Spo11 homolog: evidence that the mechanism for initiating meiotic recombination is conserved. Genes Dev 12: 2932-2942.
    • (1998) Genes Dev , vol.12 , pp. 2932-2942
    • McKim, K.S.1    Hayashi-Hagihara, A.2
  • 43
    • 0042344859 scopus 로고    scopus 로고
    • Stage-specific regulation of caspase activity in Drosophila oogenesis
    • Peterson JS, Barkett M, McCall K. 2003. Stage-specific regulation of caspase activity in Drosophila oogenesis. Dev Biol 260: 113-123.
    • (2003) Dev Biol , vol.260 , pp. 113-123
    • Peterson, J.S.1    Barkett, M.2    McCall, K.3
  • 44
    • 34248379012 scopus 로고    scopus 로고
    • Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: Lessons from recent developments in the IARC TP53 database
    • Petitjean A, Mathe E, Kato S, Ishioka C, Tavtigian SV, Hainaut P, Olivier M. 2007. Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: lessons from recent developments in the IARC TP53 database. Hum Mutat 28: 622-629.
    • (2007) Hum Mutat , vol.28 , pp. 622-629
    • Petitjean, A.1    Mathe, E.2    Kato, S.3    Ishioka, C.4    Tavtigian, S.V.5    Hainaut, P.6    Olivier, M.7
  • 45
    • 84922792031 scopus 로고    scopus 로고
    • Somatic mutations inDROSHA and DICER1 impair microRNA biogenesis through distinct mechanisms in Wilms tumours
    • Rakheja D, Mathe E, Kato S, Ishioka C, Tavtigian SV, Hainaut P, Olivier M. 2014. Somatic mutations inDROSHA and DICER1 impair microRNA biogenesis through distinct mechanisms in Wilms tumours. Nat Commun 2: 4802.
    • (2014) Nat Commun , vol.2 , pp. 4802
    • Rakheja, D.1    Mathe, E.2    Kato, S.3    Ishioka, C.4    Tavtigian, S.V.5    Hainaut, P.6    Olivier, M.7
  • 50
    • 84892599690 scopus 로고    scopus 로고
    • PIWI proteins and PIWI-interacting RNAs in the soma
    • Ross RJ,Weiner MM, Lin H. 2014. PIWI proteins and PIWI-interacting RNAs in the soma. Nature 505: 353-359.
    • (2014) Nature , vol.505 , pp. 353-359
    • Ross, R.J.1    Weiner, M.M.2    Lin, H.3
  • 52
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • Schmieder R, Edwards R. 2011.Quality control and preprocessing of metagenomic datasets. Bioinformatics 27: 863-864.
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 53
    • 35848929051 scopus 로고    scopus 로고
    • Characterization of Drosophila telomeric retroelement TAHRE: Transcription, transpositions, and RNAi-based regulation of expression
    • Shpiz S, Kwon D, Uneva A, Kim M, Klenov M, Rozovsky Y, Georgiev P, Savitsky M, Kalmykova A. 2007. Characterization of Drosophila telomeric retroelement TAHRE: transcription, transpositions, and RNAi-based regulation of expression. Mol Biol Evol 24: 2535-2545.
    • (2007) Mol Biol Evol , vol.24 , pp. 2535-2545
    • Shpiz, S.1    Kwon, D.2    Uneva, A.3    Kim, M.4    Klenov, M.5    Rozovsky, Y.6    Georgiev, P.7    Savitsky, M.8    Kalmykova, A.9
  • 55
  • 57
    • 34047216406 scopus 로고    scopus 로고
    • p53 alterations in human cancer: More questions than answers
    • Soussi T. 2007. p53 alterations in human cancer: more questions than answers. Oncogene 26: 2145-2156.
    • (2007) Oncogene , vol.26 , pp. 2145-2156
    • Soussi, T.1
  • 58
    • 84878546043 scopus 로고    scopus 로고
    • p53 efficiently suppresses tumor development in the complete absence of its cell-cycle inhibitory and proapoptotic effectors p21, Puma, and Noxa
    • Valente LJ, Gray DH, Michalak EM, Pinon-Hofbauer J, Egle A, Scott CL, Janic A, Strasser A. 2013. p53 efficiently suppresses tumor development in the complete absence of its cell-cycle inhibitory and proapoptotic effectors p21, Puma, and Noxa. Cell Rep 3: 1339-1345.
    • (2013) Cell Rep , vol.3 , pp. 1339-1345
    • Valente, L.J.1    Gray, D.H.2    Michalak, E.M.3    Pinon-Hofbauer, J.4    Egle, A.5    Scott, C.L.6    Janic, A.7    Strasser, A.8
  • 61
    • 65349103899 scopus 로고    scopus 로고
    • Blinded by the light: The growing complexity of p53
    • Vousden KH, Prives C. 2009. Blinded by the light: the growing complexity of p53. Cell 137: 413-431.
    • (2009) Cell , vol.137 , pp. 413-431
    • Vousden, K.H.1    Prives, C.2
  • 64
    • 84898723119 scopus 로고    scopus 로고
    • p53 activity is selectively licensed in the Drosophila stem cell compartment
    • Wylie A, Lu WJ, D'Brot A, Buszczak M, Abrams JM. 2014. p53 activity is selectively licensed in the Drosophila stem cell compartment. Elife 3: e01530.
    • (2014) Elife , vol.3
    • Wylie, A.1    Lu, W.J.2    D'Brot, A.3    Buszczak, M.4    Abrams, J.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.