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Volumn 17, Issue 1, 2016, Pages

Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum

Author keywords

Blue mold; Genome sequencing; Griseofulvin; Patulin; Penicillium griseofulvum; Postharvest disease; Roquefortine C; Secondary metabolites

Indexed keywords

CHANOCLAVINE L; CYCLOPIAZONIC ACID; MICROBIAL PRODUCTS NOT CLASSIFIED ELSEWHERE; PATULIN; PENICILLIN DERIVATIVE; ROQUEFORTINE C; UNCLASSIFIED DRUG; YANUTHONE D;

EID: 84952803282     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-2347-x     Document Type: Article
Times cited : (67)

References (73)
  • 1
    • 77949521510 scopus 로고    scopus 로고
    • Effect of culture media and pH on the biomass production and biocontrol efficacy of a Metschnikowia pulcherrima strain to be used as a biofungicide for postharvest disease control
    • Spadaro D, Ciavorella A, Dianpeng Z, Garibaldi A, Gullino ML. Effect of culture media and pH on the biomass production and biocontrol efficacy of a Metschnikowia pulcherrima strain to be used as a biofungicide for postharvest disease control. Can J Microbiol. 2010;56:128-137.
    • (2010) Can J Microbiol , vol.56 , pp. 128-137
    • Spadaro, D.1    Ciavorella, A.2    Dianpeng, Z.3    Garibaldi, A.4    Gullino, M.L.5
  • 2
    • 0011905879 scopus 로고
    • Penicillium solitum revived, and its role as a pathogen of pomaceous fruit
    • Pitt JI, Spotts RA, Holmes RJ, Cruickshank RH. Penicillium solitum revived, and its role as a pathogen of pomaceous fruit. Phytopathology. 1991;81:1108-1112.
    • (1991) Phytopathology , vol.81 , pp. 1108-1112
    • Pitt, J.I.1    Spotts, R.A.2    Holmes, R.J.3    Cruickshank, R.H.4
  • 3
    • 0029168620 scopus 로고
    • Postharvest decay of winter pear and apple fruit caused by species of Penicillium
    • Sanderson PG, Spotts RA. Postharvest decay of winter pear and apple fruit caused by species of Penicillium. Phytopathology. 1995;1995:103-110.
    • (1995) Phytopathology , vol.1995 , pp. 103-110
    • Sanderson, P.G.1    Spotts, R.A.2
  • 4
    • 84878914547 scopus 로고    scopus 로고
    • Genetic structure and natural variation associated with host of origin in Penicillium expansum strains causing blue mould
    • Sanzani SM, Montemurro C, Di Rienzo V, Solfrizzo M, Ippolito A. Genetic structure and natural variation associated with host of origin in Penicillium expansum strains causing blue mould. Int J Food Microbiol. 2013;165:111-120.
    • (2013) Int J Food Microbiol , vol.165 , pp. 111-120
    • Sanzani, S.M.1    Montemurro, C.2    Rienzo, V.3    Solfrizzo, M.4    Ippolito, A.5
  • 5
    • 79551559156 scopus 로고    scopus 로고
    • Patulin accumulation in apples during storage by Penicillium expansum and Penicillium griseofulvum strains
    • Welke JE, Hoeltz M, Dottori HA, Noll IB. Patulin accumulation in apples during storage by Penicillium expansum and Penicillium griseofulvum strains. Brazilian J Microbiol. 2011;42:172-180.
    • (2011) Brazilian J Microbiol , vol.42 , pp. 172-180
    • Welke, J.E.1    Hoeltz, M.2    Dottori, H.A.3    Noll, I.B.4
  • 6
    • 79751473160 scopus 로고    scopus 로고
    • First Report of Penicillium griseofulvum Causing Blue Mold on Stored Apples in Italy (Piedmont)
    • Spadaro D, Lorè A, Amatulli MT, Garibaldi A, Gullino ML. First Report of Penicillium griseofulvum Causing Blue Mold on Stored Apples in Italy (Piedmont). Plant Dis. 2011;95:76.
    • (2011) Plant Dis , vol.95 , pp. 76
    • Spadaro, D.1    Lorè, A.2    Amatulli, M.T.3    Garibaldi, A.4    Gullino, M.L.5
  • 7
    • 33646438964 scopus 로고    scopus 로고
    • Sesquiterpenoid-derived metabolite containing a novel dioxa[5,5,5,6]fenestrane ring system from a fungicolous isolate of Penicillium griseofulvum.
    • Shim SH, Swenson DC, Gloer JB, Dowd PF, Wicklow DT. Penifulvin A: a sesquiterpenoid-derived metabolite containing a novel dioxa[5,5,5,6]fenestrane ring system from a fungicolous isolate of Penicillium griseofulvum. Org Lett. 2006;8:1225-128.
    • (2006) Org Lett. , vol.8 , pp. 1225-1228
    • Shim, S.H.1    Swenson, D.C.2    Gloer, J.B.3    Dowd, P.F.4    Wicklow, D.T.5    Penifulvin, A.6
  • 9
    • 0021062867 scopus 로고
    • Classification of terverticillate penicillia based on profiles of mycotoxins and other secondary metabolites
    • Frisvad JC, Filtenborg O. Classification of terverticillate penicillia based on profiles of mycotoxins and other secondary metabolites. Appl Environ Microbiol. 1983;46:1301-1310.
    • (1983) Appl Environ Microbiol , vol.46 , pp. 1301-1310
    • Frisvad, J.C.1    Filtenborg, O.2
  • 10
    • 6444236152 scopus 로고    scopus 로고
    • Polyphasic taxonomy of Penicillium subgenus Penicillium A guide to identification of food and air-borne terverticillate Penicillia and their mycotoxins.
    • Frisvad JC, Samson RA: Polyphasic taxonomy of Penicillium subgenus Penicillium A guide to identification of food and air-borne terverticillate Penicillia and their mycotoxins. Stud Mycol. 2004:1-174.
    • (2004) Stud Mycol. , pp. 1-174
    • Frisvad, J.C.1    Samson, R.A2
  • 11
    • 84871292787 scopus 로고    scopus 로고
    • Regulation of fungal secondary metabolism
    • Brakhage AA. Regulation of fungal secondary metabolism. Nat Rev Microbiol. 2013;11:21-32.
    • (2013) Nat Rev Microbiol , vol.11 , pp. 21-32
    • Brakhage, A.A.1
  • 12
    • 30544434099 scopus 로고    scopus 로고
    • Fungal secondary metabolism - from biochemistry to genomics
    • Keller NP, Turner G, Bennett JW. Fungal secondary metabolism - from biochemistry to genomics. Nat Rev Microbiol. 2005;3(December):937-947.
    • (2005) Nat Rev Microbiol , vol.3 , Issue.DECEMBER , pp. 937-947
    • Keller, N.P.1    Turner, G.2    Bennett, J.W.3
  • 13
    • 78650213047 scopus 로고    scopus 로고
    • Biosynthesis and toxicological effects of patulin
    • Puel O, Galtier P, Oswald IP. Biosynthesis and toxicological effects of patulin. Toxins. 2010;2:613-631.
    • (2010) Toxins , vol.2 , pp. 613-631
    • Puel, O.1    Galtier, P.2    Oswald, I.P.3
  • 14
    • 0001490721 scopus 로고
    • Studies in the biochemistry of micro-organisms: Griseofulvin, C(17)H(17)O(6)Cl, a metabolic product of Penicillium griseo-fulvum Dierckx.
    • Oxford AE, Raistrick H, Simonart P. Studies in the biochemistry of micro-organisms: Griseofulvin, C(17)H(17)O(6)Cl, a metabolic product of Penicillium griseo-fulvum Dierckx. Biochem J. 1939;33:240-248.
    • (1939) Biochem J. , vol.33 , pp. 240-248
    • Oxford, A.E.1    Raistrick, H.2    Simonart, P.3
  • 15
    • 10644227919 scopus 로고    scopus 로고
    • Mycotoxins, drugs and other extrolites produced by species in Penicillium subgenus Penicillium
    • Frisvad JC, Smedsgaard J, Larsen TO, Samson RA. Mycotoxins, drugs and other extrolites produced by species in Penicillium subgenus Penicillium. Stud Mycol. 2004;2004:201-241.
    • (2004) Stud Mycol , vol.2004 , pp. 201-241
    • Frisvad, J.C.1    Smedsgaard, J.2    Larsen, T.O.3    Samson, R.A.4
  • 16
    • 0023231298 scopus 로고
    • Production of patulin and griseofulvin by a strain of Penicillium griseofulvum in three different media
    • Torres M, Canela R, Riba M, Sanchis V. Production of patulin and griseofulvin by a strain of Penicillium griseofulvum in three different media. Mycopathologia. 1987;99:85-89.
    • (1987) Mycopathologia , vol.99 , pp. 85-89
    • Torres, M.1    Canela, R.2    Riba, M.3    Sanchis, V.4
  • 17
    • 84927509844 scopus 로고    scopus 로고
    • Heterologous production of fungal secondary metabolites in Aspergilli
    • Anyaogu DC, Mortensen UH. Heterologous production of fungal secondary metabolites in Aspergilli. Front Microbiol. 2015;6:1-6.
    • (2015) Front Microbiol , vol.6 , pp. 1-6
    • Anyaogu, D.C.1    Mortensen, U.H.2
  • 19
    • 84923117708 scopus 로고    scopus 로고
    • Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity
    • Ballester A, Marcet-houben M, Levin E, Sela N, Selma-lázaro C, Carmona L, et al. Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity. Mol Plant Microbe Interact. 2015;28:232-48.
    • (2015) Mol Plant Microbe Interact , vol.28 , pp. 232-248
    • Ballester, A.1    Marcet-houben, M.2    Levin, E.3    Sela, N.4    Selma-lázaro, C.5    Carmona, L.6
  • 20
    • 84929999792 scopus 로고    scopus 로고
    • Genomic Characterization Reveals Insights Into Patulin Biosynthesis and Pathogenicity in Penicillium Species.
    • Li B, Zong Y, Du Z, Chen Y, Zhang Z, Qin G, Zhao W, Tian S. Genomic Characterization Reveals Insights Into Patulin Biosynthesis and Pathogenicity in Penicillium Species. Mol Plant-Microbe Interact. 2015; 28:635-647.
    • (2015) Mol Plant-Microbe Interact. , vol.28 , pp. 635-647
    • Li, B.1    Zong, Y.2    Du, Z.3    Chen, Y.4    Zhang, Z.5    Qin, G.6    Zhao, W.7    Tian, S.8
  • 22
    • 66849106220 scopus 로고    scopus 로고
    • Molecular cloning and functional characterization of two CYP619 cytochrome P450s involved in biosynthesis of patulin in Aspergillus clavatus
    • Artigot MP, Loiseau N, Laffitte J, Mas-Reguieg L, Tadrist S, Oswald IP, et al. Molecular cloning and functional characterization of two CYP619 cytochrome P450s involved in biosynthesis of patulin in Aspergillus clavatus. Microbiology. 2009;155:1738-1747.
    • (2009) Microbiology , vol.155 , pp. 1738-1747
    • Artigot, M.P.1    Loiseau, N.2    Laffitte, J.3    Mas-Reguieg, L.4    Tadrist, S.5    Oswald, I.P.6
  • 23
    • 84905680202 scopus 로고    scopus 로고
    • Sequencing, physical organization and kinetic expression of the patulin biosynthetic gene cluster from Penicillium expansum
    • Tannous J, El Khoury R, Snini SP, Lippi Y, El Khoury A, Atoui A, et al. Sequencing, physical organization and kinetic expression of the patulin biosynthetic gene cluster from Penicillium expansum. Int J Food Microbiol. 2014;189:51-60.
    • (2014) Int J Food Microbiol , vol.189 , pp. 51-60
    • Tannous, J.1    Khoury, R.2    Snini, S.P.3    Lippi, Y.4    Khoury, A.5    Atoui, A.6
  • 24
    • 82255194025 scopus 로고    scopus 로고
    • A single cluster of coregulated genes encodes the biosynthesis of the mycotoxins roquefortine C and meleagrin in Penicillium chrysogenum
    • García-Estrada C, Ullán RV, Albillos SM, Fernández-Bodega MÁ, Durek P, Von Döhren H, et al. A single cluster of coregulated genes encodes the biosynthesis of the mycotoxins roquefortine C and meleagrin in Penicillium chrysogenum. Chem Biol. 2011;18:1499-1512.
    • (2011) Chem Biol , vol.18 , pp. 1499-1512
    • García-Estrada, C.1    Ullán, R.V.2    Albillos, S.M.3    Fernández-Bodega, M.4    Durek, P.5    Döhren, H.6
  • 25
    • 0025006747 scopus 로고
    • Isolation of roquefortine C from feed grain
    • Haggblom P. Isolation of roquefortine C from feed grain. Appl Environ Microbiol. 1990;56:2924-2926.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 2924-2926
    • Haggblom, P.1
  • 26
    • 0019314547 scopus 로고
    • Penitrem A and Roquefortine Production by Penicillium commune
    • Wagener RE, Davis ND, Diener UL. Penitrem A and Roquefortine Production by Penicillium commune. Appl Environ Microbiol. 1980;39:882-887.
    • (1980) Appl Environ Microbiol , vol.39 , pp. 882-887
    • Wagener, R.E.1    Davis, N.D.2    Diener, U.L.3
  • 27
    • 84891416276 scopus 로고    scopus 로고
    • Novel key metabolites reveal further branching of the roquefortine/ meleagrin biosynthetic pathway
    • Ries MI, Ali H, Lankhorst PP, Hankemeier T, Bovenberg RAL, Driessen AJM, et al. Novel key metabolites reveal further branching of the roquefortine/ meleagrin biosynthetic pathway. J Biol Chem. 2013;288:37289-37295.
    • (2013) J Biol Chem , vol.288 , pp. 37289-37295
    • Ries, M.I.1    Ali, H.2    Lankhorst, P.P.3    Hankemeier, T.4    Bovenberg, R.A.L.5    Driessen, A.J.M.6
  • 28
    • 84878938243 scopus 로고    scopus 로고
    • A branched biosynthetic pathway is involved in production of roquefortine and related compounds in Penicillium chrysogenum
    • Ali H, Ries MI, Nijland JG, Lankhorst PP, Hankemeier T, Bovenberg RAL, et al. A branched biosynthetic pathway is involved in production of roquefortine and related compounds in Penicillium chrysogenum. PLoS One. 2013;8:e65328.
    • (2013) PLoS One , vol.8 , pp. e65328
    • Ali, H.1    Ries, M.I.2    Nijland, J.G.3    Lankhorst, P.P.4    Hankemeier, T.5    Bovenberg, R.A.L.6
  • 29
  • 31
    • 84906733970 scopus 로고    scopus 로고
    • Griseofulvin-producing Xylaria endophytes of Pinus strobus and Vaccinium angustifolium: evidence for a conifer-understory species endophyte ecology
    • Richardson SN, Walker AK, Nsiama TK, McFarlane J, Sumarah MW, Ibrahim A, et al. Griseofulvin-producing Xylaria endophytes of Pinus strobus and Vaccinium angustifolium: evidence for a conifer-understory species endophyte ecology. Fungal Ecol. 2014;11:107-113.
    • (2014) Fungal Ecol , vol.11 , pp. 107-113
    • Richardson, S.N.1    Walker, A.K.2    Nsiama, T.K.3    McFarlane, J.4    Sumarah, M.W.5    Ibrahim, A.6
  • 33
    • 22244469477 scopus 로고    scopus 로고
    • Kinetic suppression of microtubule dynamic instability by griseofulvin: implications for its possible use in the treatment of cancer
    • Panda D, Rathinasamy K, Santra MK, Wilson L. Kinetic suppression of microtubule dynamic instability by griseofulvin: implications for its possible use in the treatment of cancer. Proc Natl Acad Sci U S A. 2005;102:9878-9883.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 9878-9883
    • Panda, D.1    Rathinasamy, K.2    Santra, M.K.3    Wilson, L.4
  • 34
    • 77952303646 scopus 로고    scopus 로고
    • Griseofulvin stabilizes microtubule dynamics, activates p53 and inhibits the proliferation of MCF-7 cells synergistically with vinblastine
    • Rathinasamy K, Jindal B, Asthana J, Singh P, Balaji PV, Panda D. Griseofulvin stabilizes microtubule dynamics, activates p53 and inhibits the proliferation of MCF-7 cells synergistically with vinblastine. BMC Cancer. 2010;10:213.
    • (2010) BMC Cancer , vol.10 , pp. 213
    • Rathinasamy, K.1    Jindal, B.2    Asthana, J.3    Singh, P.4    Balaji, P.V.5    Panda, D.6
  • 35
    • 34447116953 scopus 로고    scopus 로고
    • Identification of griseofulvin as an inhibitor of centrosomal clustering in a phenotype-based screen
    • Rebacz B, Larsen TO, Clausen MH, Rønnest MH, Löffler H, Ho AD, et al. Identification of griseofulvin as an inhibitor of centrosomal clustering in a phenotype-based screen. Cancer Res. 2007;67:6342-6350.
    • (2007) Cancer Res , vol.67 , pp. 6342-6350
    • Rebacz, B.1    Larsen, T.O.2    Clausen, M.H.3    Rønnest, M.H.4    Löffler, H.5    Ho, A.D.6
  • 36
    • 48949104389 scopus 로고    scopus 로고
    • Griseofulvin, an oral antifungal agent, suppresses hepatitis C virus replication in vitro
    • Jin H, Yamashita A, Maekawa S, Yang P, He L, Takayanagi S, et al. Griseofulvin, an oral antifungal agent, suppresses hepatitis C virus replication in vitro. Hepatol Res. 2008;38:909-918.
    • (2008) Hepatol Res , vol.38 , pp. 909-918
    • Jin, H.1    Yamashita, A.2    Maekawa, S.3    Yang, P.4    He, L.5    Takayanagi, S.6
  • 38
    • 33748899947 scopus 로고
    • Biosynthetic source of oxygens in griseofulvin. Spin-echo resolution of oxygen-18 isotope shifts in carbon-13 NMR spectroscopy
    • Lane MP, Nakashima TT, Vederas JC. Biosynthetic source of oxygens in griseofulvin. Spin-echo resolution of oxygen-18 isotope shifts in carbon-13 NMR spectroscopy. J Am Chem Soc. 1982;104:913-915.
    • (1982) J Am Chem Soc , vol.104 , pp. 913-915
    • Lane, M.P.1    Nakashima, T.T.2    Vederas, J.C.3
  • 39
    • 0342962430 scopus 로고
    • 13C-NMR studies on griseofulvin biosynthesis and acetate metabolism in Penicillium patulum
    • Simpson TJ, Holker JSE. 13C-NMR studies on griseofulvin biosynthesis and acetate metabolism in Penicillium patulum. Phytochemistry. 1977;16:229-233.
    • (1977) Phytochemistry , vol.16 , pp. 229-233
    • Simpson, T.J.1    Holker, J.S.E.2
  • 40
    • 84886495241 scopus 로고    scopus 로고
    • Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin
    • Cacho RA, Chooi Y-H, Zhou H, Tang Y. Complexity generation in fungal polyketide biosynthesis: a spirocycle-forming P450 in the concise pathway to the antifungal drug griseofulvin. ACS Chem Biol. 2013;8:2322-2330.
    • (2013) ACS Chem Biol , vol.8 , pp. 2322-2330
    • Cacho, R.A.1    Chooi, Y.-H.2    Zhou, H.3    Tang, Y.4
  • 41
    • 84920693527 scopus 로고    scopus 로고
    • Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi
    • Cacho RA, Tang Y, Chooi Y-H. Next-generation sequencing approach for connecting secondary metabolites to biosynthetic gene clusters in fungi. Front Microbiol. 2015;5:774.
    • (2015) Front Microbiol , vol.5 , pp. 774
    • Cacho, R.A.1    Tang, Y.2    Chooi, Y.-H.3
  • 42
    • 77954200418 scopus 로고    scopus 로고
    • Identification of the viridicatumtoxin and griseofulvin gene clusters from Penicillium aethiopicum
    • Chooi Y-H, Cacho R, Tang Y. Identification of the viridicatumtoxin and griseofulvin gene clusters from Penicillium aethiopicum. Chem Biol. 2010;17:483-494.
    • (2010) Chem Biol , vol.17 , pp. 483-494
    • Chooi, Y.-H.1    Cacho, R.2    Tang, Y.3
  • 46
    • 37049103287 scopus 로고
    • Roquefortine, an intermediate in the biosynthesis of oxaline in cultures of Penicillium oxalicum
    • Steyn PS, Vleggaar R. Roquefortine, an intermediate in the biosynthesis of oxaline in cultures of Penicillium oxalicum. J Chem Soc Chem Commun. 1983;560-561.
    • (1983) J Chem Soc Chem Commun , vol.560 , pp. 561
    • Steyn, P.S.1    Vleggaar, R.2
  • 47
    • 1842632251 scopus 로고    scopus 로고
    • Penicillium expansum: consistent production of patulin, chaetoglobosins, and other secondary metabolites in culture and their natural occurrence in fruit products
    • Andersen B, Smedsgaard J, Frisvad JC. Penicillium expansum: consistent production of patulin, chaetoglobosins, and other secondary metabolites in culture and their natural occurrence in fruit products. J Agric Food Chem. 2004;52:2421-2428.
    • (2004) J Agric Food Chem , vol.52 , pp. 2421-2428
    • Andersen, B.1    Smedsgaard, J.2    Frisvad, J.C.3
  • 48
    • 85055377041 scopus 로고    scopus 로고
    • Food mycology - a multifaceted approach to fungi and food.
    • Boca Raton: CRC Press.
    • Dijksterhuis J, Samson RA. Food mycology - a multifaceted approach to fungi and food. Boca Raton: CRC Press. 2007.
    • (2007)
    • Dijksterhuis, J.1    Samson, R.A.2
  • 49
    • 0036193358 scopus 로고    scopus 로고
    • Production of Penicillin by Fungi Growing on Food Products: Identification of a Complete Penicillin Gene Cluster in Penicillium verrucosum.
    • Laich F, Fierro F. Production of Penicillin by Fungi Growing on Food Products: Identification of a Complete Penicillin Gene Cluster in Penicillium verrucosum. 2002;68:1211-1219.
    • (2002) , vol.68 , pp. 1211-1219
    • Laich, F.1    Fierro, F.2
  • 50
    • 84899660194 scopus 로고    scopus 로고
    • Molecular and chemical characterization of the biosynthesis of the 6-MSA-derived meroterpenoid yanuthone D in Aspergillus niger
    • Holm DK, Petersen LM, Klitgaard A, Knudsen PB, Jarczynska ZD, Nielsen KF, et al. Molecular and chemical characterization of the biosynthesis of the 6-MSA-derived meroterpenoid yanuthone D in Aspergillus niger. Chem Biol. 2014;21:519-529.
    • (2014) Chem Biol , vol.21 , pp. 519-529
    • Holm, D.K.1    Petersen, L.M.2    Klitgaard, A.3    Knudsen, P.B.4    Jarczynska, Z.D.5    Nielsen, K.F.6
  • 51
    • 79958280118 scopus 로고    scopus 로고
    • Ergot cluster-encoded catalase is required for synthesis of chanoclavine-I in Aspergillus fumigatus
    • Goetz KE, Coyle CM, Cheng JZ, O'Connor SE, Panaccione DG. Ergot cluster-encoded catalase is required for synthesis of chanoclavine-I in Aspergillus fumigatus. Curr Genet. 2011;57:201-211.
    • (2011) Curr Genet , vol.57 , pp. 201-211
    • Goetz, K.E.1    Coyle, C.M.2    Cheng, J.Z.3    O'Connor, S.E.4    Panaccione, D.G.5
  • 52
    • 84908115795 scopus 로고    scopus 로고
    • The important ergot alkaloid intermediate chanoclavine-I produced in the yeast Saccharomyces cerevisiae by the combined action of EasC and EasE from Aspergillus japonicus
    • Nielsen CAF, Folly C, Hatsch A, Molt A, Schröder H, O'Connor SE, et al. The important ergot alkaloid intermediate chanoclavine-I produced in the yeast Saccharomyces cerevisiae by the combined action of EasC and EasE from Aspergillus japonicus. Microb Cell Fact. 2014;13:95.
    • (2014) Microb Cell Fact , vol.13 , pp. 95
    • Nielsen, C.A.F.1    Folly, C.2    Hatsch, A.3    Molt, A.4    Schröder, H.5    O'Connor, S.E.6
  • 53
    • 84875264267 scopus 로고    scopus 로고
    • Partial Reconstruction of the Ergot Alkaloid Pathway by Heterologous Gene Expression in Aspergillus nidulans
    • Ryan K, Moore C, Panaccione D. Partial Reconstruction of the Ergot Alkaloid Pathway by Heterologous Gene Expression in Aspergillus nidulans. Toxins. 2013;5:445-455.
    • (2013) Toxins , vol.5 , pp. 445-455
    • Ryan, K.1    Moore, C.2    Panaccione, D.3
  • 54
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics.
    • GIn: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. New York: Academic Press, Inc.
    • White TJ, Bruns TD, Lee SB, Taylor JW. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. GIn: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: A Guide to Methods and Applicattions. New York: Academic Press, Inc. 1990. p. 315-322.
    • (1990) PCR protocols: A Guide to Methods and Applicattions. , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.B.3    Taylor, J.W.4
  • 56
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: a multiple sequence alignment method with reduced time and space complexity
    • Edgar RC. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics. 2004;5:113.
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edgar, R.C.1
  • 57
    • 67650757433 scopus 로고    scopus 로고
    • trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
    • Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics. 2009;25:1972-1973.
    • (2009) Bioinformatics , vol.25 , pp. 1972-1973
    • Capella-Gutiérrez, S.1    Silla-Martínez, J.M.2    Gabaldón, T.3
  • 58
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.
    • Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W, Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 2010;59:307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.-F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 60
    • 78651300216 scopus 로고    scopus 로고
    • PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions
    • Huerta-Cepas J, Capella-Gutierrez S, Pryszcz LP, Denisov I, Kormes D, Marcet-Houben M, et al. PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions. Nucleic Acids Res. 2011;39(Database issue):D556-560.
    • (2011) Nucleic Acids Res , vol.39 , Issue.DATABASE ISSUE , pp. D556-D560
    • Huerta-Cepas, J.1    Capella-Gutierrez, S.2    Pryszcz, L.P.3    Denisov, I.4    Kormes, D.5    Marcet-Houben, M.6
  • 61
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: improvement in accuracy of multiple sequence alignment
    • Katoh K, Kuma K, Toh H, Miyata T. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 2005;33:511-518.
    • (2005) Nucleic Acids Res , vol.33 , pp. 511-518
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 62
    • 29244447181 scopus 로고    scopus 로고
    • Kalign--an accurate and fast multiple sequence alignment algorithm
    • Lassmann T, Sonnhammer ELL. Kalign--an accurate and fast multiple sequence alignment algorithm. BMC Bioinformatics. 2005;6:298.
    • (2005) BMC Bioinformatics , vol.6 , pp. 298
    • Lassmann, T.1    Sonnhammer, E.L.L.2
  • 63
    • 34548088457 scopus 로고    scopus 로고
    • Heads or tails: a simple reliability check for multiple sequence alignments
    • Landan G, Graur D. Heads or tails: a simple reliability check for multiple sequence alignments. Mol Biol Evol. 2007;24:1380-1383.
    • (2007) Mol Biol Evol , vol.24 , pp. 1380-1383
    • Landan, G.1    Graur, D.2
  • 65
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data
    • Gascuel O. BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol Biol Evol. 1997;14:685-695.
    • (1997) Mol Biol Evol , vol.14 , pp. 685-695
    • Gascuel, O.1
  • 66
    • 85041932998 scopus 로고
    • Maximum likelihood identification of Gaussian autoregressive moving average models
    • AKAIKE H. Maximum likelihood identification of Gaussian autoregressive moving average models. Biometrika. 1973;60:255-265.
    • (1973) Biometrika , vol.60 , pp. 255-265
    • Akaike, H.1
  • 68
    • 14644397888 scopus 로고    scopus 로고
    • RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees
    • Stamatakis A, Ludwig T, Meier H. RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics. 2005;21:456-463.
    • (2005) Bioinformatics , vol.21 , pp. 456-463
    • Stamatakis, A.1    Ludwig, T.2    Meier, H.3
  • 69
    • 84865559041 scopus 로고    scopus 로고
    • A new strain of Metschnikowia fructicola for postharvest control of Penicillium expansum and patulin accumulation on four cultivars of apple
    • Spadaro D, Lorè A, Garibaldi A, Gullino ML. A new strain of Metschnikowia fructicola for postharvest control of Penicillium expansum and patulin accumulation on four cultivars of apple. Postharv Biol Technol. 2013;75:1-8.
    • (2013) Postharv Biol Technol , vol.75 , pp. 1-8
    • Spadaro, D.1    Lorè, A.2    Garibaldi, A.3    Gullino, M.L.4
  • 70
    • 64149097786 scopus 로고    scopus 로고
    • The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
    • Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, et al. The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem. 2009;55:611-622.
    • (2009) Clin Chem , vol.55 , pp. 611-622
    • Bustin, S.A.1    Benes, V.2    Garson, J.A.3    Hellemans, J.4    Huggett, J.5    Kubista, M.6
  • 73
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic acids research. 2001;29, e45.
    • (2001) Nucleic acids research , vol.29
    • Pfaffl, M.W.1


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