-
1
-
-
84887628469
-
13C metabolic flux analysis: optimal design of isotopic labeling experiments
-
13C metabolic flux analysis: optimal design of isotopic labeling experiments. Curr. Opin. Biotechnol. 2013, 24:1116-1121.
-
(2013)
Curr. Opin. Biotechnol.
, vol.24
, pp. 1116-1121
-
-
Antoniewicz, M.R.1
-
2
-
-
84887622596
-
Dynamic metabolic flux analysis - tools for probing transient states of metabolic networks
-
Antoniewicz M.R. Dynamic metabolic flux analysis - tools for probing transient states of metabolic networks. Curr. Opin. Biotechnol. 2013, 24:973-978.
-
(2013)
Curr. Opin. Biotechnol.
, vol.24
, pp. 973-978
-
-
Antoniewicz, M.R.1
-
3
-
-
33745155105
-
Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements
-
Antoniewicz M.R., Kelleher J.K., Stephanopoulos G. Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements. Metab. Eng. 2006, 8:324-337.
-
(2006)
Metab. Eng.
, vol.8
, pp. 324-337
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
4
-
-
35348941242
-
Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis
-
Antoniewicz M.R., Kelleher J.K., Stephanopoulos G. Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis. Anal. Chem. 2007, 79:7554-7559.
-
(2007)
Anal. Chem.
, vol.79
, pp. 7554-7559
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
5
-
-
33845679072
-
Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions
-
Antoniewicz M.R., Kelleher J.K., Stephanopoulos G. Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions. Metab. Eng. 2007, 9:68-86.
-
(2007)
Metab. Eng.
, vol.9
, pp. 68-86
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
6
-
-
79954522565
-
Measuring deuterium enrichment of glucose hydrogen atoms by gas chromatography/mass spectrometry
-
Antoniewicz M.R., Kelleher J.K., Stephanopoulos G. Measuring deuterium enrichment of glucose hydrogen atoms by gas chromatography/mass spectrometry. Anal. Chem. 2011, 83:3211-3216.
-
(2011)
Anal. Chem.
, vol.83
, pp. 3211-3216
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
7
-
-
34249297627
-
Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol
-
Antoniewicz M.R., Kraynie D.F., Laffend L.A., Gonzalez-Lergier J., Kelleher J.K., Stephanopoulos G. Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol. Metab. Eng. 2007, 9:277-292.
-
(2007)
Metab. Eng.
, vol.9
, pp. 277-292
-
-
Antoniewicz, M.R.1
Kraynie, D.F.2
Laffend, L.A.3
Gonzalez-Lergier, J.4
Kelleher, J.K.5
Stephanopoulos, G.6
-
8
-
-
84907920598
-
Parallel labeling experiments validate Clostridium acetobutylicum metabolic network model for C metabolic flux analysis
-
Au J., Choi J., Jones S.W., Venkataramanan K.P., Antoniewicz M.R. Parallel labeling experiments validate Clostridium acetobutylicum metabolic network model for C metabolic flux analysis. Metab. Eng. 2014, 26:23-33.
-
(2014)
Metab. Eng.
, vol.26
, pp. 23-33
-
-
Au, J.1
Choi, J.2
Jones, S.W.3
Venkataramanan, K.P.4
Antoniewicz, M.R.5
-
9
-
-
84905030784
-
Transformable facultative thermophile Geobacillus stearothermophilus NUB3621 as a host strain for metabolic engineering
-
Blanchard K., Robic S., Matsumura I. Transformable facultative thermophile Geobacillus stearothermophilus NUB3621 as a host strain for metabolic engineering. Appl. Microbiol. Biotechnol. 2014, 98:6715-6723.
-
(2014)
Appl. Microbiol. Biotechnol.
, vol.98
, pp. 6715-6723
-
-
Blanchard, K.1
Robic, S.2
Matsumura, I.3
-
10
-
-
84864130913
-
Taxonomic revision of the genus Geobacillus: emendation of Geobacillus, G. stearothermophilus, G. jurassicus, G. toebii, G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.;
-
Coorevits A., Dinsdale A.E., Halket G., Lebbe L., De Vos P., Van Landschoot A., Logan N.A. Taxonomic revision of the genus Geobacillus: emendation of Geobacillus, G. stearothermophilus, G. jurassicus, G. toebii, G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov. Int. J. Syst. Evol. Microbiol. 2012, 62:1470-1485.
-
(2012)
Int. J. Syst. Evol. Microbiol.
, vol.62
, pp. 1470-1485
-
-
Coorevits, A.1
Dinsdale, A.E.2
Halket, G.3
Lebbe, L.4
De Vos, P.5
Van Landschoot, A.6
Logan, N.A.7
-
11
-
-
84943239543
-
Complete genome sequence, metabolic model construction and phenotypic characterization of Geobacillus LC300, an extremely thermophilic, fast growing, xylose-utilizing bacterium
-
under review
-
Cordova L.T., Long C.P., Venkataramanan K.P., Antoniewicz M.R. Complete genome sequence, metabolic model construction and phenotypic characterization of Geobacillus LC300, an extremely thermophilic, fast growing, xylose-utilizing bacterium. Metab. Eng. 2015, under review.
-
(2015)
Metab. Eng.
-
-
Cordova, L.T.1
Long, C.P.2
Venkataramanan, K.P.3
Antoniewicz, M.R.4
-
12
-
-
70450221933
-
Metabolic engineering of Geobacillus thermoglucosidasius for high yield ethanol production
-
Cripps R.E., Eley K., Leak D.J., Rudd B., Taylor M., Todd M., Boakes S., Martin S., Atkinson T. Metabolic engineering of Geobacillus thermoglucosidasius for high yield ethanol production. Metab. Eng. 2009, 11:398-408.
-
(2009)
Metab. Eng.
, vol.11
, pp. 398-408
-
-
Cripps, R.E.1
Eley, K.2
Leak, D.J.3
Rudd, B.4
Taylor, M.5
Todd, M.6
Boakes, S.7
Martin, S.8
Atkinson, T.9
-
13
-
-
84872122643
-
Parallel labeling experiments and metabolic flux analysis: past, present and future methodologies
-
Crown S.B., Antoniewicz M.R. Parallel labeling experiments and metabolic flux analysis: past, present and future methodologies. Metab. Eng. 2013, 16:21-32.
-
(2013)
Metab. Eng.
, vol.16
, pp. 21-32
-
-
Crown, S.B.1
Antoniewicz, M.R.2
-
14
-
-
84884526984
-
13C metabolic flux analysis studies: a review and future perspectives
-
13C metabolic flux analysis studies: a review and future perspectives. Metab. Eng. 2013, 20:42-48.
-
(2013)
Metab. Eng.
, vol.20
, pp. 42-48
-
-
Crown, S.B.1
Antoniewicz, M.R.2
-
15
-
-
84922245805
-
13C-metabolic flux analysis of 14 parallel labeling experiments in Escherichia coli
-
13C-metabolic flux analysis of 14 parallel labeling experiments in Escherichia coli. Metab. Eng. 2015, 28:151-158.
-
(2015)
Metab. Eng.
, vol.28
, pp. 151-158
-
-
Crown, S.B.1
Antoniewicz, M.R.2
-
18
-
-
84892799105
-
13C-metabolic flux analysis
-
13C-metabolic flux analysis. Biotechnol. Bioeng. 2014, 111:575-585.
-
(2014)
Biotechnol. Bioeng.
, vol.111
, pp. 575-585
-
-
He, L.1
Xiao, Y.2
Gebreselassie, N.3
Zhang, F.4
Antoniewicz, M.R.5
Tang, Y.J.6
Peng, L.7
-
19
-
-
84865597532
-
Parallel labeling experiments with [U-(13)C]glucose validate E. coli metabolic network model for (13)C metabolic flux analysis
-
Leighty R.W., Antoniewicz M.R. Parallel labeling experiments with [U-(13)C]glucose validate E. coli metabolic network model for (13)C metabolic flux analysis. Metab. Eng. 2012, 14:533-541.
-
(2012)
Metab. Eng.
, vol.14
, pp. 533-541
-
-
Leighty, R.W.1
Antoniewicz, M.R.2
-
20
-
-
84884386184
-
COMPLETE-MFA: complementary parallel labeling experiments technique for metabolic flux analysis
-
Leighty R.W., Antoniewicz M.R. COMPLETE-MFA: complementary parallel labeling experiments technique for metabolic flux analysis. Metab. Eng. 2013, 20:49-55.
-
(2013)
Metab. Eng.
, vol.20
, pp. 49-55
-
-
Leighty, R.W.1
Antoniewicz, M.R.2
-
21
-
-
84899555105
-
Isobutanol production at elevated temperatures in thermophilic Geobacillus thermoglucosidasius
-
Lin P.P., Rabe K.S., Takasumi J.L., Kadisch M., Arnold F.H., Liao J.C. Isobutanol production at elevated temperatures in thermophilic Geobacillus thermoglucosidasius. Metab. Eng. 2014, 24:1-8.
-
(2014)
Metab. Eng.
, vol.24
, pp. 1-8
-
-
Lin, P.P.1
Rabe, K.S.2
Takasumi, J.L.3
Kadisch, M.4
Arnold, F.H.5
Liao, J.C.6
-
22
-
-
84907889105
-
Quantifying biomass composition by gas chromatography/mass spectrometry
-
Long C.P., Antoniewicz M.R. Quantifying biomass composition by gas chromatography/mass spectrometry. Anal. Chem. 2014, 86:9423-9427.
-
(2014)
Anal. Chem.
, vol.86
, pp. 9423-9427
-
-
Long, C.P.1
Antoniewicz, M.R.2
-
24
-
-
63549092275
-
Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain
-
Tang Y.J., Sapra R., Joyner D., Hazen T.C., Myers S., Reichmuth D., Blanch H., Keasling J.D. Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain. Biotechnol. Bioeng. 2009, 102:1377-1386.
-
(2009)
Biotechnol. Bioeng.
, vol.102
, pp. 1377-1386
-
-
Tang, Y.J.1
Sapra, R.2
Joyner, D.3
Hazen, T.C.4
Myers, S.5
Reichmuth, D.6
Blanch, H.7
Keasling, J.D.8
-
25
-
-
67649111013
-
Thermophilic ethanologenesis: future prospects for second-generation bioethanol production
-
Taylor M.P., Eley K.L., Martin S., Tuffin M.I., Burton S.G., Cowan D.A. Thermophilic ethanologenesis: future prospects for second-generation bioethanol production. Trends Biotechnol. 2009, 27:398-405.
-
(2009)
Trends Biotechnol.
, vol.27
, pp. 398-405
-
-
Taylor, M.P.1
Eley, K.L.2
Martin, S.3
Tuffin, M.I.4
Burton, S.G.5
Cowan, D.A.6
-
26
-
-
84898884130
-
Engineering pyruvate decarboxylase-mediated ethanol production in the thermophilic host Geobacillus thermoglucosidasius
-
Van Zyl L.J., Taylor M.P., Eley K., Tuffin M., Cowan D.A. Engineering pyruvate decarboxylase-mediated ethanol production in the thermophilic host Geobacillus thermoglucosidasius. Appl. Microbiol. Biotechnol. 2014, 98:1247-1259.
-
(2014)
Appl. Microbiol. Biotechnol.
, vol.98
, pp. 1247-1259
-
-
Van Zyl, L.J.1
Taylor, M.P.2
Eley, K.3
Tuffin, M.4
Cowan, D.A.5
-
27
-
-
84952636986
-
Metabolomic and C-metabolic flux analysis of a xylose-consuming Saccharomyces cerevisiae strain expressing xylose isomerase
-
Wasylenko T.M., Stephanopoulos G. Metabolomic and C-metabolic flux analysis of a xylose-consuming Saccharomyces cerevisiae strain expressing xylose isomerase. Biotechnol. Bioeng. 2014.
-
(2014)
Biotechnol. Bioeng.
-
-
Wasylenko, T.M.1
Stephanopoulos, G.2
-
28
-
-
76449118333
-
Alternative isoleucine synthesis pathway in cyanobacterial species
-
Wu B., Zhang B., Feng X., Rubens J.R., Huang R., Hicks L.M., Pakrasi H.B., Tang Y.J. Alternative isoleucine synthesis pathway in cyanobacterial species. Microbiology 2010, 156:596-602.
-
(2010)
Microbiology
, vol.156
, pp. 596-602
-
-
Wu, B.1
Zhang, B.2
Feng, X.3
Rubens, J.R.4
Huang, R.5
Hicks, L.M.6
Pakrasi, H.B.7
Tang, Y.J.8
-
29
-
-
84870413115
-
Thermophilic fermentation of acetoin and 2,3-butanediol by a novel Geobacillus strain
-
Xiao Z., Wang X., Huang Y., Huo F., Zhu X., Xi L., Lu J.R. Thermophilic fermentation of acetoin and 2,3-butanediol by a novel Geobacillus strain. Biotechnology Biofuels 2012, 5:88.
-
(2012)
Biotechnology Biofuels
, vol.5
, pp. 88
-
-
Xiao, Z.1
Wang, X.2
Huang, Y.3
Huo, F.4
Zhu, X.5
Xi, L.6
Lu, J.R.7
-
30
-
-
51049091904
-
Quantifying reductive carboxylation flux of glutamine to lipid in a brown adipocyte cell line
-
Yoo H., Antoniewicz M.R., Stephanopoulos G., Kelleher J.K. Quantifying reductive carboxylation flux of glutamine to lipid in a brown adipocyte cell line. J. Biol. Chem. 2008, 283:20621-20627.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 20621-20627
-
-
Yoo, H.1
Antoniewicz, M.R.2
Stephanopoulos, G.3
Kelleher, J.K.4
-
31
-
-
38449111120
-
An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis
-
Young J.D., Walther J.L., Antoniewicz M.R., Yoo H., Stephanopoulos G. An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis. Biotechnol. Bioeng. 2008, 99:686-699.
-
(2008)
Biotechnol. Bioeng.
, vol.99
, pp. 686-699
-
-
Young, J.D.1
Walther, J.L.2
Antoniewicz, M.R.3
Yoo, H.4
Stephanopoulos, G.5
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