-
1
-
-
77953508204
-
2O emissions from activated sludge processes, 2008-2009: Results of a national monitoring survey in the united states
-
2O emissions from activated sludge processes, 2008-2009: Results of a national monitoring survey in the united states. Enviro Sci Technol 44:4505-4511.
-
(2010)
Enviro Sci Technol
, vol.44
, pp. 4505-4511
-
-
Ahn, J.H.1
Kim, S.2
Park, H.3
Rahm, B.4
Pagilla, K.5
Chandran, K.6
-
2
-
-
79953239093
-
Comparison of partial and full nitrification processes applied for treating high-strength nitrogen wastewaters: Microbial ecology through nitrous oxide production
-
Ahn JH, Kwan T, Chandran K. 2011. Comparison of partial and full nitrification processes applied for treating high-strength nitrogen wastewaters: Microbial ecology through nitrous oxide production. Enviro Sci Technol 45:2734-2740.
-
(2011)
Enviro Sci Technol
, vol.45
, pp. 2734-2740
-
-
Ahn, J.H.1
Kwan, T.2
Chandran, K.3
-
3
-
-
84918827944
-
Full-scale validation of a model of algal productivity
-
Béchet Q, Shilton A, Guieysse B. 2014. Full-scale validation of a model of algal productivity. Enviro Sci Technol 48:13826-13833.
-
(2014)
Enviro Sci Technol
, vol.48
, pp. 13826-13833
-
-
Béchet, Q.1
Shilton, A.2
Guieysse, B.3
-
4
-
-
83055194714
-
Flux balance analysis of mixed anaerobic microbial communities: Effects of linoleic acid (LA) and pH on biohydrogen production
-
Chaganti SR, Kim D-, Lalman JA. 2011. Flux balance analysis of mixed anaerobic microbial communities: Effects of linoleic acid (LA) and pH on biohydrogen production. Int J Hydrogen Energy 36:14141-14152.
-
(2011)
Int J Hydrogen Energy
, vol.36
, pp. 14141-14152
-
-
Chaganti, S.R.1
Kim, D.2
Lalman, J.A.3
-
5
-
-
0037408431
-
Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea
-
Chain P, Lamerdin J, Larimer F, Regala W, Lao V, Land M, Hauser L, Hooper A, Klotz M, Norton J, Sayavedra-Soto L, Arciero D, Hommes N, Whittaker M, Arp D. 2003. Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea. J Bacteriol 185:2759-2773.
-
(2003)
J Bacteriol
, vol.185
, pp. 2759-2773
-
-
Chain, P.1
Lamerdin, J.2
Larimer, F.3
Regala, W.4
Lao, V.5
Land, M.6
Hauser, L.7
Hooper, A.8
Klotz, M.9
Norton, J.10
Sayavedra-Soto, L.11
Arciero, D.12
Hommes, N.13
Whittaker, M.14
Arp, D.15
-
6
-
-
84916886861
-
Nitric oxide preferentially inhibits nitrite oxidizing communities with high affinity for nitrite
-
Courtens ENP, De Clippeleir H, Vlaeminck SE, Jordaens R, Park H, Chandran K, Boon N. 2015. Nitric oxide preferentially inhibits nitrite oxidizing communities with high affinity for nitrite. J Biotechnol 193:120-122.
-
(2015)
J Biotechnol
, vol.193
, pp. 120-122
-
-
Courtens, E.N.P.1
De Clippeleir, H.2
Vlaeminck, S.E.3
Jordaens, R.4
Park, H.5
Chandran, K.6
Boon, N.7
-
7
-
-
80054680738
-
The microbiology of nitrogen removal
-
In: Seviour RJ, Nielsen PH, editors. London: IWA Publishing.
-
Daims H, Wagner M. 2010. The microbiology of nitrogen removal. In: Seviour RJ, Nielsen PH, editors. Microbial ecology of activated sludge. London: IWA Publishing. p 259-280.
-
(2010)
Microbial ecology of activated sludge
, pp. 259-280
-
-
Daims, H.1
Wagner, M.2
-
8
-
-
33749578843
-
Wastewater treatment: A model system for microbial ecology
-
Daims H, Taylor MW, Wagner M. 2006. Wastewater treatment: A model system for microbial ecology. Trends Biotechnol 24:483-489.
-
(2006)
Trends Biotechnol
, vol.24
, pp. 483-489
-
-
Daims, H.1
Taylor, M.W.2
Wagner, M.3
-
9
-
-
27744553785
-
Mathematical modelling of a mixed culture cultivation process for the production of polyhydroxybutyrate
-
Dias JML, Serafim LS, Lemos PC, Reis MAM, Oliveira R. 2005. Mathematical modelling of a mixed culture cultivation process for the production of polyhydroxybutyrate. Biotechnol Bioeng 92:209-222.
-
(2005)
Biotechnol Bioeng
, vol.92
, pp. 209-222
-
-
Dias, J.M.L.1
Serafim, L.S.2
Lemos, P.C.3
Reis, M.A.M.4
Oliveira, R.5
-
10
-
-
33847129611
-
Cytochromes P460 and c'-β A new family of high-spin cytochromes c
-
Elmore BO, Bergmann DJ, Klotz MG, Hooper AB. 2007. Cytochromes P460 and c'-β A new family of high-spin cytochromes c. FEBS Lett 581:911-916.
-
(2007)
FEBS Lett
, vol.581
, pp. 911-916
-
-
Elmore, B.O.1
Bergmann, D.J.2
Klotz, M.G.3
Hooper, A.B.4
-
11
-
-
58549108388
-
Reconstruction of biochemical networks in microorganisms
-
Feist AM, Herrgård MJ, Thiele I, Reed JL, Palsson BØ. 2009. Reconstruction of biochemical networks in microorganisms. Nat Rev Microbiol 7:129-143.
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 129-143
-
-
Feist, A.M.1
Herrgård, M.J.2
Thiele, I.3
Reed, J.L.4
Palsson, B.5
-
12
-
-
76049102641
-
Nitrous oxide generation in full-scale biological nutrient removal wastewater treatment plants
-
Foley J, de Haas D, Yuan Z, Lant P. 2010. Nitrous oxide generation in full-scale biological nutrient removal wastewater treatment plants. Water Res 44:831-844.
-
(2010)
Water Res
, vol.44
, pp. 831-844
-
-
Foley, J.1
de Haas, D.2
Yuan, Z.3
Lant, P.4
-
14
-
-
39849102118
-
Unraveling the source of nitric oxide emission during nitrification
-
Kampschreur MJ, Picioreanu C, Tan N, Kleerebezem R, Jetten MSM, Van Loosdrecht MCM. 2007. Unraveling the source of nitric oxide emission during nitrification. Water Environ Res 79:2499-2509.
-
(2007)
Water Environ Res
, vol.79
, pp. 2499-2509
-
-
Kampschreur, M.J.1
Picioreanu, C.2
Tan, N.3
Kleerebezem, R.4
Jetten, M.S.M.5
Van Loosdrecht, M.C.M.6
-
15
-
-
40949105275
-
Effect of dynamic process conditions on nitrogen oxides emission from a nitrifying culture
-
Kampschreur MJ, Tan NCG, Kleerebezem R, Picioreanu C, Jetten MSM, Van Loosdrecht MCM. 2008. Effect of dynamic process conditions on nitrogen oxides emission from a nitrifying culture. Enviro Sci Technol 42:429-435.
-
(2008)
Enviro Sci Technol
, vol.42
, pp. 429-435
-
-
Kampschreur, M.J.1
Tan, N.C.G.2
Kleerebezem, R.3
Picioreanu, C.4
Jetten, M.S.M.5
Van Loosdrecht, M.C.M.6
-
16
-
-
69949100728
-
Nitrous oxide emission during wastewater treatment
-
Kampschreur MJ, Temmink H, Kleerebezem R, Jetten MSM, van Loosdrecht MCM. 2009. Nitrous oxide emission during wastewater treatment. Water Res 43:4093-4103.
-
(2009)
Water Res
, vol.43
, pp. 4093-4103
-
-
Kampschreur, M.J.1
Temmink, H.2
Kleerebezem, R.3
Jetten, M.S.M.4
van Loosdrecht, M.C.M.5
-
17
-
-
1642418320
-
Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradiography-fluorescence in situ hybridization
-
Kindaichi T, Ito T, Okabe S. 2004. Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradiography-fluorescence in situ hybridization. Appl Environ Microbiol 70:1641-1650.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1641-1650
-
-
Kindaichi, T.1
Ito, T.2
Okabe, S.3
-
18
-
-
78649677586
-
Environments that induce synthetic microbial ecosystems
-
Klitgord N, Segrè D. 2010. Environments that induce synthetic microbial ecosystems. PLoS Comput Biol 6:e1001002.
-
(2010)
PLoS Comput Biol
, vol.6
, pp. e1001002
-
-
Klitgord, N.1
Segrè, D.2
-
19
-
-
33748762204
-
Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707
-
Klotz MG, Arp DJ, Chain PSG, El-Sheikh AF, Hauser LJ, Hommes NG, Larimer FW, Malfatti SA, Norton JM, Poret-Peterson AT, Vergez LM, Ward BB. 2006. Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707. Appl Environ Microbiol 72:6299-6315.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 6299-6315
-
-
Klotz, M.G.1
Arp, D.J.2
Chain, P.S.G.3
El-Sheikh, A.F.4
Hauser, L.J.5
Hommes, N.G.6
Larimer, F.W.7
Malfatti, S.A.8
Norton, J.M.9
Poret-Peterson, A.T.10
Vergez, L.M.11
Ward, B.B.12
-
20
-
-
33745433792
-
Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data
-
Kümmel A, Panke S, Heinemann M. 2006. Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data. Mol Sys Biol 2:0034.
-
(2006)
Mol Sys Biol
, vol.2
, pp. 0034
-
-
Kümmel, A.1
Panke, S.2
Heinemann, M.3
-
21
-
-
80054035112
-
2O production under aerobic conditions in a partial nitritation system
-
2O production under aerobic conditions in a partial nitritation system. Water Res 45:5934-5944.
-
(2011)
Water Res
, vol.45
, pp. 5934-5944
-
-
Law, Y.1
Lant, P.2
Yuan, Z.3
-
22
-
-
84861198149
-
N2O production rate of an enriched ammonia-oxidising bacteria culture exponentially correlates to its ammonia oxidation rate
-
Law Y, Ni B, Lant P, Yuan Z. 2012. N2O production rate of an enriched ammonia-oxidising bacteria culture exponentially correlates to its ammonia oxidation rate. Water Res 46:3409-3419.
-
(2012)
Water Res
, vol.46
, pp. 3409-3419
-
-
Law, Y.1
Ni, B.2
Lant, P.3
Yuan, Z.4
-
23
-
-
77955141026
-
Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models
-
Lewis NE, Hixson KK, Conrad TM, Lerman JA, Charusanti P, Polpitiya AD, Adkins JN, Schramm G, Purvine SO, Lopez-Ferrer D, Weitz KK, Eils R, König R, Smith RD, Palsson BØ. 2010. Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models. Mol Sys Biol 6:390.
-
(2010)
Mol Sys Biol
, vol.6
, pp. 390
-
-
Lewis, N.E.1
Hixson, K.K.2
Conrad, T.M.3
Lerman, J.A.4
Charusanti, P.5
Polpitiya, A.D.6
Adkins, J.N.7
Schramm, G.8
Purvine, S.O.9
Lopez-Ferrer, D.10
Weitz, K.K.11
Eils, R.12
König, R.13
Smith, R.D.14
Palsson, B.15
-
24
-
-
84875875462
-
The genome of Nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer
-
Lücker S, Nowka B, Rattei T, Spieck E, Daims H. 2013. The genome of Nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer. Frontiers in Microbiology 4:27.
-
(2013)
Frontiers in Microbiology
, vol.4
, pp. 27
-
-
Lücker, S.1
Nowka, B.2
Rattei, T.3
Spieck, E.4
Daims, H.5
-
25
-
-
77955791222
-
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
-
Lücker S, Wagner M, Maixner F, Pelletier E, Koch H, Vacherie B, Rattei T, Damsté JSS, Spieck E, Le Paslier D, Daims H. 2010. A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria. Proc Natl Acad Sci USA 107:13479-13484.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 13479-13484
-
-
Lücker, S.1
Wagner, M.2
Maixner, F.3
Pelletier, E.4
Koch, H.5
Vacherie, B.6
Rattei, T.7
Damsté, J.S.S.8
Spieck, E.9
Le Paslier, D.10
Daims, H.11
-
27
-
-
84880571152
-
Modeling nitrous and nitric oxide emissions by autotrophic ammonia-oxidizing bacteria
-
Mampaey KE, Beuckels B, Kampschreur MJ, Kleerebezem R, Van Loosdrecht MCM, Volcke EIP. 2013. Modeling nitrous and nitric oxide emissions by autotrophic ammonia-oxidizing bacteria. Environ Technol 34:1555-1566.
-
(2013)
Environ Technol
, vol.34
, pp. 1555-1566
-
-
Mampaey, K.E.1
Beuckels, B.2
Kampschreur, M.J.3
Kleerebezem, R.4
Van Loosdrecht, M.C.M.5
Volcke, E.I.P.6
-
29
-
-
44949239735
-
Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment
-
Norton JM, Klotz MG, Stein LY, Arp DJ, Bottomley PJ, Chain PSG, Hauser LJ, Land ML, Larimer FW, Shin MW, Starkenburg SR. 2008. Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment. Appl Environ Microbiol 74:3559-3572.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 3559-3572
-
-
Norton, J.M.1
Klotz, M.G.2
Stein, L.Y.3
Arp, D.J.4
Bottomley, P.J.5
Chain, P.S.G.6
Hauser, L.J.7
Land, M.L.8
Larimer, F.W.9
Shin, M.W.10
Starkenburg, S.R.11
-
30
-
-
0025613888
-
Cytochrome P-460 of Nitrosomonas europaea: Further purification and further characterization
-
Numata M, Saito T, Yamazaki T, Fukumori Y, Yamanaka T. 1990. Cytochrome P-460 of Nitrosomonas europaea: Further purification and further characterization. J Biochem 108:1016-1021.
-
(1990)
J Biochem
, vol.108
, pp. 1016-1021
-
-
Numata, M.1
Saito, T.2
Yamazaki, T.3
Fukumori, Y.4
Yamanaka, T.5
-
32
-
-
84868464488
-
Flux balance analysis of mixed microbial cultures: Application to the production of polyhydroxyalkanoates from complex mixtures of volatile fatty acids
-
Pardelha F, Albuquerque MGE, Reis MAM, Dias JML, Oliveira R. 2012. Flux balance analysis of mixed microbial cultures: Application to the production of polyhydroxyalkanoates from complex mixtures of volatile fatty acids. J Biotechnol 162:336-345.
-
(2012)
J Biotechnol
, vol.162
, pp. 336-345
-
-
Pardelha, F.1
Albuquerque, M.G.E.2
Reis, M.A.M.3
Dias, J.M.L.4
Oliveira, R.5
-
33
-
-
84921761470
-
A method to calibrate metabolic network models with experimental datasets
-
Perez-Garcia O, Villas-Boas SG, Singhal N. 2014a. A method to calibrate metabolic network models with experimental datasets. Adv Intell Syst Comput 294:183-190.
-
(2014)
Adv Intell Syst Comput
, vol.294
, pp. 183-190
-
-
Perez-Garcia, O.1
Villas-Boas, S.G.2
Singhal, N.3
-
34
-
-
84901194885
-
Clarifying the regulation of NO/N2O production in Nitrosomonas europaea during anoxic-oxic transition via flux balance analysis of a metabolic network model
-
Perez-Garcia O, Villas-Boas SG, Swift S, Chandran K, Singhal N. 2014b. Clarifying the regulation of NO/N2O production in Nitrosomonas europaea during anoxic-oxic transition via flux balance analysis of a metabolic network model. Water Res 60:267-277.
-
(2014)
Water Res
, vol.60
, pp. 267-277
-
-
Perez-Garcia, O.1
Villas-Boas, S.G.2
Swift, S.3
Chandran, K.4
Singhal, N.5
-
35
-
-
67549136082
-
Mitigating release of the potent greenhouse gas N2O from the nitrogen cycle-Could enzymic regulation hold the key
-
Richardson D, Felgate H, Watmough N, Thomson A, Baggs E. 2009. Mitigating release of the potent greenhouse gas N2O from the nitrogen cycle-Could enzymic regulation hold the key? Trends Biotechnol 27:388-397.
-
(2009)
Trends Biotechnol
, vol.27
, pp. 388-397
-
-
Richardson, D.1
Felgate, H.2
Watmough, N.3
Thomson, A.4
Baggs, E.5
-
36
-
-
76949084897
-
Diffusion of nitric oxide through the gastric wall upon reduction of nitrite by red wine: Physiological impact
-
Rocha BS, Gago B, Barbosa RM, Laranjinha J. 2010. Diffusion of nitric oxide through the gastric wall upon reduction of nitrite by red wine: Physiological impact. Nitric Oxide 22:235-241.
-
(2010)
Nitric Oxide
, vol.22
, pp. 235-241
-
-
Rocha, B.S.1
Gago, B.2
Barbosa, R.M.3
Laranjinha, J.4
-
37
-
-
0026594358
-
Optimal selection of metabolic fluxes for in vivo measurement. I. Development of mathematical methods
-
Savinell JM, Palsson BO. 1992. Optimal selection of metabolic fluxes for in vivo measurement. I. Development of mathematical methods. J Theor Biol 155:201-214.
-
(1992)
J Theor Biol
, vol.155
, pp. 201-214
-
-
Savinell, J.M.1
Palsson, B.O.2
-
38
-
-
79551662521
-
Quantitative prediction of cellular metabolism with constraint-based models: The COBRA Toolbox v2.0
-
Schellenberger J, Que R, Fleming RMT, Thiele I, Orth JD, Feist AM, Zielinski DC, Bordbar A, Lewis NE, Rahmanian S, Kang J, Hyduke DR, Palsson BØ. 2011. Quantitative prediction of cellular metabolism with constraint-based models: The COBRA Toolbox v2.0. Nat Prot 6:1290-1307.
-
(2011)
Nat Prot
, vol.6
, pp. 1290-1307
-
-
Schellenberger, J.1
Que, R.2
Fleming, R.M.T.3
Thiele, I.4
Orth, J.D.5
Feist, A.M.6
Zielinski, D.C.7
Bordbar, A.8
Lewis, N.E.9
Rahmanian, S.10
Kang, J.11
Hyduke, D.R.12
Palsson, B.13
-
39
-
-
84873432664
-
Nitric oxide and nitrous oxide turnover in natural and engineered microbial communities: Biological pathways, chemical reactions, and novel technologies
-
Schreiber F, Wunderlin P, Udert KM, Wells GF. 2012. Nitric oxide and nitrous oxide turnover in natural and engineered microbial communities: Biological pathways, chemical reactions, and novel technologies. Front Microbiol 3:372.
-
(2012)
Front Microbiol
, vol.3
, pp. 372
-
-
Schreiber, F.1
Wunderlin, P.2
Udert, K.M.3
Wells, G.F.4
-
40
-
-
34447523907
-
Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli
-
Schuetz R, Kuepfer L, Sauer U. 2007. Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli. Mol Syst Biol 3:119.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 119
-
-
Schuetz, R.1
Kuepfer, L.2
Sauer, U.3
-
41
-
-
84961941717
-
-
In: Ward BB, Arp DJ, Klotz MG, editors. Washington, DC: ASM Press.
-
Starkenburg SR, Spieck E, Bottomley PJ. 2011. In: Ward BB, Arp DJ, Klotz MG, editors. Metabolism and genomics of nitrite oxidizing bacteria: Emphasis on studies of pure cultures and of Nitrobacter species. Washington, DC: ASM Press. p 267-2963.
-
(2011)
Metabolism and genomics of nitrite oxidizing bacteria: Emphasis on studies of pure cultures and of Nitrobacter species
, pp. 267-2963
-
-
Starkenburg, S.R.1
Spieck, E.2
Bottomley, P.J.3
-
42
-
-
52949130583
-
Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255
-
Starkenburg SR, Arp DJ, Bottomley PJ. 2008a. Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255. Environ Microbiol 10:3036-3042.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3036-3042
-
-
Starkenburg, S.R.1
Arp, D.J.2
Bottomley, P.J.3
-
43
-
-
43049151065
-
Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter
-
Starkenburg SR, Larimer FW, Stein LY, Klotz MG, Chain PSG, Sayavedra-Soto LA, Poret-Peterson AT, Gentry ME, Arp DJ, Ward B, Bottomley PJ. 2008b. Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter. Appl Environ Microbiol 74:2852-2863.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 2852-2863
-
-
Starkenburg, S.R.1
Larimer, F.W.2
Stein, L.Y.3
Klotz, M.G.4
Chain, P.S.G.5
Sayavedra-Soto, L.A.6
Poret-Peterson, A.T.7
Gentry, M.E.8
Arp, D.J.9
Ward, B.10
Bottomley, P.J.11
-
44
-
-
33644932387
-
Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255
-
Starkenburg SR, Chain PSG, Sayavedra-Soto LA, Hauser L, Land ML, Larimer FW, Malfatti SA, Klotz MG, Bottomley PJ, Arp DJ, Hickey WJ. 2006. Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255. Appl Environ Microbiol 72:2050-2063.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2050-2063
-
-
Starkenburg, S.R.1
Chain, P.S.G.2
Sayavedra-Soto, L.A.3
Hauser, L.4
Land, M.L.5
Larimer, F.W.6
Malfatti, S.A.7
Klotz, M.G.8
Bottomley, P.J.9
Arp, D.J.10
Hickey, W.J.11
-
45
-
-
81855186714
-
Heterotrophic nitrification and nitrifier denitrification
-
In: Ward BB, Arp DJ, Klotz MG, editors. Washington, DC: ASM Press.
-
Stein LY. 2011. Heterotrophic nitrification and nitrifier denitrification. In: Ward BB, Arp DJ, Klotz MG, editors. Nitrification. Washington, DC: ASM Press. p 95.
-
(2011)
Nitrification
, pp. 95
-
-
Stein, L.Y.1
-
46
-
-
78650943696
-
Surveying N2O-producing pathways in bacteria
-
Stein LY. 2010. Surveying N2O-producing pathways in bacteria. Method Enzymol 486:131-152.
-
(2010)
Method Enzymol
, vol.486
, pp. 131-152
-
-
Stein, L.Y.1
-
47
-
-
35948986372
-
Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: Implications for niche adaptation
-
Stein LY, Arp DJ, Berube PM, Chain PSG, Hauser L, Jetten MSM, Klotz MG, Larimer FW, Norton JM, Op Den Camp HJM, Shin M, Wei X. 2007. Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: Implications for niche adaptation. Environ Microbiol 9:2993-3007.
-
(2007)
Environ Microbiol
, vol.9
, pp. 2993-3007
-
-
Stein, L.Y.1
Arp, D.J.2
Berube, P.M.3
Chain, P.S.G.4
Hauser, L.5
Jetten, M.S.M.6
Klotz, M.G.7
Larimer, F.W.8
Norton, J.M.9
Op Den Camp, H.J.M.10
Shin, M.11
Wei, X.12
-
48
-
-
33947276100
-
Metabolic modeling of a mutualistic microbial community
-
Stolyar S, Van Dien S, Hillesland KL, Pinel N, Lie TJ, Leigh JA, Stahl DA. 2007. Metabolic modeling of a mutualistic microbial community. Mol Syst Biol 3:92.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 92
-
-
Stolyar, S.1
Van Dien, S.2
Hillesland, K.L.3
Pinel, N.4
Lie, T.J.5
Leigh, J.A.6
Stahl, D.A.7
-
49
-
-
74049119822
-
In Silico approaches to study mass and energy flows in microbial consortia: A syntrophic case study
-
Taffs R, Aston JE, Brileya K, Jay Z, Klatt CG, McGlynn S, Mallette N, Montross S, Gerlach R, Inskeep WP, Ward DM, Carlson RP. 2009. In Silico approaches to study mass and energy flows in microbial consortia: A syntrophic case study. BMC Sys Biol 3:114.
-
(2009)
BMC Sys Biol
, vol.3
, pp. 114
-
-
Taffs, R.1
Aston, J.E.2
Brileya, K.3
Jay, Z.4
Klatt, C.G.5
McGlynn, S.6
Mallette, N.7
Montross, S.8
Gerlach, R.9
Inskeep, W.P.10
Ward, D.M.11
Carlson, R.P.12
-
50
-
-
75149129569
-
A protocol for generating a high-quality genome-scale metabolic reconstruction
-
Thiele I, Palsson BØ. 2010. A protocol for generating a high-quality genome-scale metabolic reconstruction. Nat Prot 5:93-121.
-
(2010)
Nat Prot
, vol.5
, pp. 93-121
-
-
Thiele, I.1
Palsson, B.2
-
51
-
-
33747019547
-
Centering, scaling, and transformations: Improving the biological information content of metabolomics data
-
van den Berg RA, Hoefsloot HCJ, Westerhuis JA, Smilde AK, van der Werf MJ. 2006. Centering, scaling, and transformations: Improving the biological information content of metabolomics data. BMC Genomics 7:142.
-
(2006)
BMC Genomics
, vol.7
, pp. 142
-
-
van den Berg, R.A.1
Hoefsloot, H.C.J.2
Westerhuis, J.A.3
Smilde, A.K.4
van der Werf, M.J.5
-
52
-
-
70350329112
-
Modelling activated sludge processes
-
In: Ward BB, Arp DJ, Klotz MG, editors. London, UK: IWA Publishing.
-
van Loosdrecht MCM, Ekama GA, Wentzel MC, Brdjanovic D, Hooijmans CM. 2008. Modelling activated sludge processes. In: Ward BB, Arp DJ, Klotz MG, editors. Biological wastewater treatment. Principles, modelling and design. London, UK: IWA Publishing. p 361.
-
(2008)
Biological wastewater treatment. Principles, modelling and design
, pp. 361
-
-
van Loosdrecht, M.C.M.1
Ekama, G.A.2
Wentzel, M.C.3
Brdjanovic, D.4
Hooijmans, C.M.5
-
53
-
-
0028108519
-
Metabolic flux balancing: Basic concepts, scientific and practical use
-
Varma A, Palsson BO. 1994a. Metabolic flux balancing: Basic concepts, scientific and practical use. Nat Biotechnol 12:994-998.
-
(1994)
Nat Biotechnol
, vol.12
, pp. 994-998
-
-
Varma, A.1
Palsson, B.O.2
-
54
-
-
0028146781
-
Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110
-
Varma A, Palsson BO. 1994b. Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. Appl Environ Microbiol 60:3724-3731.
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 3724-3731
-
-
Varma, A.1
Palsson, B.O.2
-
55
-
-
79960937215
-
Emissions credits: Opportunity to promote integrated nitrogen management in the wastewater sector
-
Wang JS, Hamburg SP, Pryor DE, Chandran K, Daigger GT. 2011. Emissions credits: Opportunity to promote integrated nitrogen management in the wastewater sector. Enviro Sci Technol 45:6239-6246.
-
(2011)
Enviro Sci Technol
, vol.45
, pp. 6239-6246
-
-
Wang, J.S.1
Hamburg, S.P.2
Pryor, D.E.3
Chandran, K.4
Daigger, G.T.5
-
56
-
-
0034663575
-
Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea
-
Whittaker M, Bergmann D, Arciero D, Hooper AB. 2000. Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea. BBA-Bioenergetics 1459:346-355.
-
(2000)
BBA-Bioenergetics
, vol.1459
, pp. 346-355
-
-
Whittaker, M.1
Bergmann, D.2
Arciero, D.3
Hooper, A.B.4
-
57
-
-
70349687228
-
Nitrous oxide: No laughing matter
-
Wuebbles DJ. 2009. Nitrous oxide: No laughing matter. Science 326(5949):57-56.
-
(2009)
Science
, vol.326
, Issue.5949
, pp. 56-57
-
-
Wuebbles, D.J.1
-
58
-
-
84873445001
-
Isotope signatures of N2O in a mixed microbial population system: Constraints on N2O producing pathways in wastewater treatment
-
Wunderlin P, Lehmann MF, Siegrist H, Tuzson B, Joss A, Emmenegger L, Mohn J. 2013. Isotope signatures of N2O in a mixed microbial population system: Constraints on N2O producing pathways in wastewater treatment. Enviro Sci Technol 47:1339-1348.
-
(2013)
Enviro Sci Technol
, vol.47
, pp. 1339-1348
-
-
Wunderlin, P.1
Lehmann, M.F.2
Siegrist, H.3
Tuzson, B.4
Joss, A.5
Emmenegger, L.6
Mohn, J.7
-
59
-
-
84856082903
-
Mechanisms of N2O production in biological wastewater treatment under nitrifying and denitrifying conditions
-
Wunderlin P, Mohn J, Joss A, Emmenegger L, Siegrist H. 2012. Mechanisms of N2O production in biological wastewater treatment under nitrifying and denitrifying conditions. Water Res 46:1027-1037.
-
(2012)
Water Res
, vol.46
, pp. 1027-1037
-
-
Wunderlin, P.1
Mohn, J.2
Joss, A.3
Emmenegger, L.4
Siegrist, H.5
-
60
-
-
77249146010
-
Mechanisms and specific directionality of autotrophic nitrous oxide and nitric oxide generation during transient anoxia
-
Yu R, Kampschreur MJ, Van Loosdrecht MCM, Chandran K. 2010. Mechanisms and specific directionality of autotrophic nitrous oxide and nitric oxide generation during transient anoxia. Enviro Sci Technol 44:1313-1319.
-
(2010)
Enviro Sci Technol
, vol.44
, pp. 1313-1319
-
-
Yu, R.1
Kampschreur, M.J.2
Van Loosdrecht, M.C.M.3
Chandran, K.4
|