-
1
-
-
0028079873
-
Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria
-
Teske A, et al. (1994) Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria. J Bacteriol 176:6623-6630.
-
(1994)
J Bacteriol
, vol.176
, pp. 6623-6630
-
-
Teske, A.1
-
2
-
-
33644932387
-
Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255
-
Starkenburg SR, et al. (2006) Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255. Appl Environ Microbiol 72:2050-2063.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2050-2063
-
-
Starkenburg, S.R.1
-
3
-
-
43049151065
-
Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter
-
Starkenburg SR, et al. (2008) Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter. Appl Environ Microbiol 74:2852-2863.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 2852-2863
-
-
Starkenburg, S.R.1
-
4
-
-
0029121005
-
A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship
-
Ehrich S, Behrens D, Lebedeva E, Ludwig W, Bock E (1995) A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship. Arch Microbiol 164:16-23.
-
(1995)
Arch Microbiol
, vol.164
, pp. 16-23
-
-
Ehrich, S.1
Behrens, D.2
Lebedeva, E.3
Ludwig, W.4
Bock, E.5
-
5
-
-
0035512205
-
In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants
-
Daims H, Nielsen JL, Nielsen PH, Schleifer KH, Wagner M (2001) In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants. Appl Environ Microbiol 67:5273-5284.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 5273-5284
-
-
Daims, H.1
Nielsen, J.L.2
Nielsen, P.H.3
Schleifer, K.H.4
Wagner, M.5
-
6
-
-
29144506348
-
Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils
-
Freitag TE, Chang L, Clegg CD, Prosser JI (2005) Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils. Appl Environ Microbiol 71:8323-8334.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8323-8334
-
-
Freitag, T.E.1
Chang, L.2
Clegg, C.D.3
Prosser, J.I.4
-
7
-
-
0041350475
-
In situ distribution and activity of nitrifying bacteria in freshwater sediment
-
Altmann D, Stief P, Amann R, De Beer D, Schramm A (2003) In situ distribution and activity of nitrifying bacteria in freshwater sediment. Environ Microbiol 5:798-803.
-
(2003)
Environ Microbiol
, vol.5
, pp. 798-803
-
-
Altmann, D.1
Stief, P.2
Amann, R.3
De Beer, D.4
Schramm, A.5
-
8
-
-
0002740689
-
Nitrospira marina gen. nov. sp. nov.: A chemolithotrophic nitrite-oxidizing bacterium
-
Watson SW, Bock E, Valois FW, Waterbury JB, Schlosser U (1986) Nitrospira marina gen. nov. sp. nov.: A chemolithotrophic nitrite-oxidizing bacterium. Arch Microbiol 144:1-7.
-
(1986)
Arch Microbiol
, vol.144
, pp. 1-7
-
-
Watson, S.W.1
Bock, E.2
Valois, F.W.3
Waterbury, J.B.4
Schlosser, U.5
-
9
-
-
24944487899
-
Moderately thermophilic nitrifying bacteria from a hot spring of the Baikal rift zone
-
Lebedeva EV, et al. (2005) Moderately thermophilic nitrifying bacteria from a hot spring of the Baikal rift zone. FEMS Microbiol Ecol 54:297-306.
-
(2005)
FEMS Microbiol Ecol
, vol.54
, pp. 297-306
-
-
Lebedeva, E.V.1
-
10
-
-
33745791511
-
Nitrite concentration influences the population structure of Nitrospira-like bacteria
-
Maixner F, et al. (2006) Nitrite concentration influences the population structure of Nitrospira-like bacteria. Environ Microbiol 8:1487-1495.
-
(2006)
Environ Microbiol
, vol.8
, pp. 1487-1495
-
-
Maixner, F.1
-
11
-
-
0032812283
-
Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: Quantification by in situ hybridization and the use of microsensors
-
Schramm A, de Beer D, van den Heuvel JC, Ottengraf S, Amann R (1999) Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: Quantification by in situ hybridization and the use of microsensors. Appl Environ Microbiol 65:3690-3696.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 3690-3696
-
-
Schramm, A.1
De Beer, D.2
Van Den Heuvel, J.C.3
Ottengraf, S.4
Amann, R.5
-
12
-
-
52949088250
-
Environmental genomics reveals a functional chlorite dismutase in the nitrite-oxidizing bacterium 'Candidatus Nitrospira defluvii'
-
Maixner F, et al. (2008) Environmental genomics reveals a functional chlorite dismutase in the nitrite-oxidizing bacterium 'Candidatus Nitrospira defluvii'. Environ Microbiol 10:3043-3056.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3043-3056
-
-
Maixner, F.1
-
13
-
-
33644942172
-
Selective enrichment and molecular characterization of a previously uncultured Nitrospira-like bacterium from activated sludge
-
Spieck E, et al. (2006) Selective enrichment and molecular characterization of a previously uncultured Nitrospira-like bacterium from activated sludge. Environ Microbiol 8:405-415.
-
(2006)
Environ Microbiol
, vol.8
, pp. 405-415
-
-
Spieck, E.1
-
14
-
-
33645741019
-
Deciphering the evolution and metabolism of an anammox bacterium from a community genome
-
Strous M, et al. (2006) Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440:790-794.
-
(2006)
Nature
, vol.440
, pp. 790-794
-
-
Strous, M.1
-
15
-
-
1542377296
-
Community structure and metabolism through reconstruction of microbial genomes from the environment
-
Tyson GW, et al. (2004) Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 428:37-43.
-
(2004)
Nature
, vol.428
, pp. 37-43
-
-
Tyson, G.W.1
-
16
-
-
58049183225
-
Comparative genomic analysis of carbon and nitrogen assimilation mechanisms in three indigenous bioleaching bacteria: Predictions and validations
-
Levicán G, Ugalde JA, Ehrenfeld N, Maass A, Parada P (2008) Comparative genomic analysis of carbon and nitrogen assimilation mechanisms in three indigenous bioleaching bacteria: Predictions and validations. BMC Genomics 9:581.
-
(2008)
BMC Genomics
, vol.9
, pp. 581
-
-
Levicán, G.1
Ugalde, J.A.2
Ehrenfeld, N.3
Maass, A.4
Parada, P.5
-
17
-
-
67649576309
-
Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (group II) and "Leptospirillum ferrodiazotrophum" (group III) bacteria in acid mine drainage biofilms
-
Goltsman DS, et al. (2009) Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (group II) and "Leptospirillum ferrodiazotrophum" (group III) bacteria in acid mine drainage biofilms. Appl Environ Microbiol 75:4599-4615.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4599-4615
-
-
Goltsman, D.S.1
-
18
-
-
0026643151
-
Nitrite oxidoreductase from Nitrobacter hamburgensis: Redox centers and their catalytic role
-
Meincke M, Bock E, Kastrau D, Kroneck PMH (1992) Nitrite oxidoreductase from Nitrobacter hamburgensis: Redox centers and their catalytic role. Arch Microbiol 158: 127-131.
-
(1992)
Arch Microbiol
, vol.158
, pp. 127-131
-
-
Meincke, M.1
Bock, E.2
Kastrau, D.3
Kroneck, P.M.H.4
-
19
-
-
0021686081
-
Membrane-bound nitrite oxidoreductase of Nitrobacter: Evidence for a nitrate reductase system
-
Sundermeyer-Klinger H, Meyer W, Warninghoff B, Bock E (1984) Membrane-bound nitrite oxidoreductase of Nitrobacter: Evidence for a nitrate reductase system. Arch Microbiol 140:153-158.
-
(1984)
Arch Microbiol
, vol.140
, pp. 153-158
-
-
Sundermeyer-Klinger, H.1
Meyer, W.2
Warninghoff, B.3
Bock, E.4
-
20
-
-
0027496372
-
Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases
-
Kirstein K, Bock E (1993) Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases. Arch Microbiol 160:447-453.
-
(1993)
Arch Microbiol
, vol.160
, pp. 447-453
-
-
Kirstein, K.1
Bock, E.2
-
21
-
-
0031951770
-
Isolation and immunocytochemical location of the nitrite-oxidizing system in Nitrospira moscoviensis
-
Spieck E, Ehrich S, Aamand J, Bock E (1998) Isolation and immunocytochemical location of the nitrite-oxidizing system in Nitrospira moscoviensis. Arch Microbiol 169: 225-230.
-
(1998)
Arch Microbiol
, vol.169
, pp. 225-230
-
-
Spieck, E.1
Ehrich, S.2
Aamand, J.3
Bock, E.4
-
22
-
-
35448931242
-
Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases
-
Martinez-Espinosa RM, et al. (2007) Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases. FEMS Microbiol Lett 276:129-139.
-
(2007)
FEMS Microbiol Lett
, vol.276
, pp. 129-139
-
-
Martinez-Espinosa, R.M.1
-
23
-
-
0036016822
-
Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: Its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes
-
McDevitt CA, Hugenholtz P, Hanson GR, McEwan AG (2002) Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: Its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes. Mol Microbiol 44:1575-1587.
-
(2002)
Mol Microbiol
, vol.44
, pp. 1575-1587
-
-
McDevitt, C.A.1
Hugenholtz, P.2
Hanson, G.R.3
McEwan, A.G.4
-
24
-
-
0035102909
-
The coordination and function of the redox centres of the membrane-bound nitrate reductases
-
Blasco F, et al. (2001) The coordination and function of the redox centres of the membrane-bound nitrate reductases. Cell Mol Life Sci 58:179-193.
-
(2001)
Cell Mol Life Sci
, vol.58
, pp. 179-193
-
-
Blasco, F.1
-
25
-
-
50049103112
-
The prokaryotic complex iron-sulfur molybdoenzyme family
-
Rothery RA, Workun GJ, Weiner JH (2008) The prokaryotic complex iron-sulfur molybdoenzyme family. Biochim Biophys Acta 1778:1897-1929.
-
(2008)
Biochim Biophys Acta
, vol.1778
, pp. 1897-1929
-
-
Rothery, R.A.1
Workun, G.J.2
Weiner, J.H.3
-
27
-
-
52949130583
-
Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255
-
Starkenburg SR, Arp DJ, Bottomley PJ (2008) Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255. Environ Microbiol 10:3036-3042.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3036-3042
-
-
Starkenburg, S.R.1
Arp, D.J.2
Bottomley, P.J.3
-
28
-
-
0001861914
-
The biochemistry of nitrifying organisms
-
eds Shively JM, Barton LL (Academic Press, London)
-
Bock E, Koops HP, Harms H, Ahlers B (1991) The biochemistry of nitrifying organisms. Variations in Autotrophic Life, eds Shively JM, Barton LL (Academic Press, London), pp 171-200.
-
(1991)
Variations in Autotrophic Life
, pp. 171-200
-
-
Bock, E.1
Koops, H.P.2
Harms, H.3
Ahlers, B.4
-
29
-
-
0141993683
-
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO
-
Ashida H, et al. (2003) A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO. Science 302:286-290.
-
(2003)
Science
, vol.302
, pp. 286-290
-
-
Ashida, H.1
-
31
-
-
0031864880
-
The effect of the reversed tricarboxylic acid cycle on the C-13 contents of bacterial lipids
-
van der Meer MTJ, Schouten S, Damste JSS (1998) The effect of the reversed tricarboxylic acid cycle on the C-13 contents of bacterial lipids. Org Geochem 28: 527-533.
-
(1998)
Org Geochem
, vol.28
, pp. 527-533
-
-
Van Der Meer, M.T.J.1
Schouten, S.2
Damste, J.S.S.3
-
33
-
-
0021950232
-
2 assimilation via the reductive tricarboxylic-acid cycle in an obligately autotrophic, aerobic hydrogen-oxidizing bacterium, Hydrogenobacter thermophilus
-
2 assimilation via the reductive tricarboxylic-acid cycle in an obligately autotrophic, aerobic hydrogen-oxidizing bacterium, Hydrogenobacter thermophilus. Arch Microbiol 141:198-203.
-
(1985)
Arch Microbiol
, vol.141
, pp. 198-203
-
-
Shiba, H.1
Kawasumi, T.2
Igarashi, Y.3
Kodama, T.4
Minoda, Y.5
-
34
-
-
33748802503
-
Role of two 2-oxoglutarate:ferredoxin oxidoreductases in Hydrogenobacter thermophilus under aerobic and anaerobic conditions
-
Yamamoto M, Arai H, Ishii M, Igarashi Y (2006) Role of two 2-oxoglutarate:ferredoxin oxidoreductases in Hydrogenobacter thermophilus under aerobic and anaerobic conditions. FEMS Microbiol Lett 263:189-193.
-
(2006)
FEMS Microbiol Lett
, vol.263
, pp. 189-193
-
-
Yamamoto, M.1
Arai, H.2
Ishii, M.3
Igarashi, Y.4
-
35
-
-
29244479524
-
Anabolic five subunit-type pyruvate:ferredoxin oxidoreductase from Hydrogenobacter thermophilus TK-6
-
Ikeda T, et al. (2006) Anabolic five subunit-type pyruvate:ferredoxin oxidoreductase from Hydrogenobacter thermophilus TK-6. Biochem Biophys Res Commun 340:76-82.
-
(2006)
Biochem Biophys Res Commun
, vol.340
, pp. 76-82
-
-
Ikeda, T.1
-
37
-
-
14644397208
-
Cytochrome bd oxidase, oxidative stress, and dioxygen tolerance of the strictly anaerobic bacterium Moorella thermoacetica
-
Das A, Silaghi-Dumitrescu R, Ljungdahl LG, Kurtz DM, Jr (2005) Cytochrome bd oxidase, oxidative stress, and dioxygen tolerance of the strictly anaerobic bacterium Moorella thermoacetica. J Bacteriol 187:2020-2029.
-
(2005)
J Bacteriol
, vol.187
, pp. 2020-2029
-
-
Das, A.1
Silaghi-Dumitrescu, R.2
Ljungdahl, L.G.3
Kurtz Jr., D.M.4
-
38
-
-
34047118522
-
CRISPR provides acquired resistance against viruses in prokaryotes
-
Barrangou R, et al. (2007) CRISPR provides acquired resistance against viruses in prokaryotes. Science 315:1709-1712.
-
(2007)
Science
, vol.315
, pp. 1709-1712
-
-
Barrangou, R.1
-
39
-
-
34547339831
-
The lithoautotrophic nitrite-oxidizing bacteria
-
eds Staley JT, et al. (Springer Science+Business Media, New York), 2nd Ed
-
Spieck E, Bock E (2005) The lithoautotrophic nitrite-oxidizing bacteria. Bergey's Manual of Systematic Bacteriology, eds Staley JT, et al. (Springer Science+Business Media, New York), Vol 2, 2nd Ed, pp 149-153.
-
(2005)
Bergey's Manual of Systematic Bacteriology
, vol.2
, pp. 149-153
-
-
Spieck, E.1
Bock, E.2
-
40
-
-
34347383411
-
Nitrite, an electron donor for anoxygenic photosynthesis
-
Griffin BM, Schott J, Schink B (2007) Nitrite, an electron donor for anoxygenic photosynthesis. Science 316:1870.
-
(2007)
Science
, vol.316
, pp. 1870
-
-
Griffin, B.M.1
Schott, J.2
Schink, B.3
-
41
-
-
56749131424
-
Nitrospira community composition in nitrifying reactors operated with two different dissolved oxygen levels
-
Park HD, Noguera DR (2008) Nitrospira community composition in nitrifying reactors operated with two different dissolved oxygen levels. J Microbiol Biotechnol 18: 1470-1474.
-
(2008)
J Microbiol Biotechnol
, vol.18
, pp. 1470-1474
-
-
Park, H.D.1
Noguera, D.R.2
-
42
-
-
31644444476
-
MaGe: A microbial genome annotation system supported by synteny results
-
Vallenet D, et al. (2006) MaGe: A microbial genome annotation system supported by synteny results. Nucleic Acids Res 34:53-65.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 53-65
-
-
Vallenet, D.1
-
43
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig W, et al. (2004) ARB: A software environment for sequence data. Nucleic Acids Res 32:1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
-
44
-
-
4944233611
-
PhyloGenie: Automated phylome generation and analysis
-
Frickey T, Lupas AN (2004) PhyloGenie: Automated phylome generation and analysis. Nucleic Acids Res 32:5231-5238.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5231-5238
-
-
Frickey, T.1
Lupas, A.N.2
-
45
-
-
2942590219
-
Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria
-
Schouten S, et al. (2004) Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria. Appl Environ Microbiol 70:3785-3788.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 3785-3788
-
-
Schouten, S.1
|