-
1
-
-
0038046204
-
Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock
-
Bessho Y., Hirata H., Masamizu Y., Kageyama R. Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock. Genes. Dev. 2003, 17:1451-1456.
-
(2003)
Genes. Dev.
, vol.17
, pp. 1451-1456
-
-
Bessho, Y.1
Hirata, H.2
Masamizu, Y.3
Kageyama, R.4
-
2
-
-
0035887251
-
Dynamic expression and essential functions of Hes7 in somite segmentation
-
Bessho Y., Sakata R., Komatsu S., Shiota K., Yamada S., Kageyama R. Dynamic expression and essential functions of Hes7 in somite segmentation. Genes. Dev. 2001, 15:2642-2647.
-
(2001)
Genes. Dev.
, vol.15
, pp. 2642-2647
-
-
Bessho, Y.1
Sakata, R.2
Komatsu, S.3
Shiota, K.4
Yamada, S.5
Kageyama, R.6
-
3
-
-
0036179204
-
The heat-inducible zebrafish hsp70 gene is expressed during normal lens development under non-stress conditions
-
Blechinger S.R., Evans T.G., Tang P.T., Kuwada J.Y., Warren J.T., Krone P.H. The heat-inducible zebrafish hsp70 gene is expressed during normal lens development under non-stress conditions. Mech. Dev. 2002, 112:213-215.
-
(2002)
Mech. Dev.
, vol.112
, pp. 213-215
-
-
Blechinger, S.R.1
Evans, T.G.2
Tang, P.T.3
Kuwada, J.Y.4
Warren, J.T.5
Krone, P.H.6
-
4
-
-
70350743147
-
Expression of the oscillating gene her1 is directly regulated by Hairy/Enhancer of Split, T-box, and Suppressor of Hairless proteins in the zebrafish segmentation clock
-
Brend T., Holley S.A. Expression of the oscillating gene her1 is directly regulated by Hairy/Enhancer of Split, T-box, and Suppressor of Hairless proteins in the zebrafish segmentation clock. Dev. Dyn. 2009, 238:2745-2759.
-
(2009)
Dev. Dyn.
, vol.238
, pp. 2745-2759
-
-
Brend, T.1
Holley, S.A.2
-
5
-
-
80055102092
-
Zebrafish whole mount high-resolution double fluorescent in situ hybridization
-
Brend T., Holley S.A. Zebrafish whole mount high-resolution double fluorescent in situ hybridization. J. Vis. Exp. 2009, 25:e1229.
-
(2009)
J. Vis. Exp.
, vol.25
, pp. e1229
-
-
Brend, T.1
Holley, S.A.2
-
6
-
-
84890452664
-
Etv5a regulates the proliferation of ventral mesoderm cells and the formation of hemato-vascular derivatives
-
Chen S.Y., Shih H.Y., Lin S.J., Hsiao C.D., Li Z.C., Cheng Y.C. Etv5a regulates the proliferation of ventral mesoderm cells and the formation of hemato-vascular derivatives. J. Cell. Sci. 2013, 126:5626-5634.
-
(2013)
J. Cell. Sci.
, vol.126
, pp. 5626-5634
-
-
Chen, S.Y.1
Shih, H.Y.2
Lin, S.J.3
Hsiao, C.D.4
Li, Z.C.5
Cheng, Y.C.6
-
7
-
-
0029831088
-
Inhibition of Xbra transcription activation causes defects in mesodermal patterning and reveals autoregulation of Xbra in dorsal mesoderm
-
Conlon F.L., Sedgwick S.G., Weston K.M., Smith J.C. Inhibition of Xbra transcription activation causes defects in mesodermal patterning and reveals autoregulation of Xbra in dorsal mesoderm. Development 1996, 122:2427-2435.
-
(1996)
Development
, vol.122
, pp. 2427-2435
-
-
Conlon, F.L.1
Sedgwick, S.G.2
Weston, K.M.3
Smith, J.C.4
-
8
-
-
0141862018
-
Opposing FGF and retinoid pathways control ventral neural pattern, neuronal differentiation, and segmentation during body axis extension
-
Diez del Corral R., Olivera-Martinez I., Goriely A., Gale E., Maden M., Storey K. Opposing FGF and retinoid pathways control ventral neural pattern, neuronal differentiation, and segmentation during body axis extension. Neuron 2003, 40:65-79.
-
(2003)
Neuron
, vol.40
, pp. 65-79
-
-
Diez del Corral, R.1
Olivera-Martinez, I.2
Goriely, A.3
Gale, E.4
Maden, M.5
Storey, K.6
-
9
-
-
62649099616
-
Identification of direct T-box target genes in the developing zebrafish mesoderm
-
Garnett A.T., Han T.M., Gilchrist M.J., Smith J.C., Eisen M.B., Wardle F.C., Amacher S.L. Identification of direct T-box target genes in the developing zebrafish mesoderm. Development 2009, 136:749-760.
-
(2009)
Development
, vol.136
, pp. 749-760
-
-
Garnett, A.T.1
Han, T.M.2
Gilchrist, M.J.3
Smith, J.C.4
Eisen, M.B.5
Wardle, F.C.6
Amacher, S.L.7
-
11
-
-
0041422244
-
An interacting network of T-box genes directs gene expression and fate in the zebrafish mesoderm
-
Goering L.M., Hoshijima K., Hug B., Bisgrove B., Kispert A., Grunwald D.J. An interacting network of T-box genes directs gene expression and fate in the zebrafish mesoderm. Proc. Natl. Acad. Sci. USA 2003, 100:9410-9415.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9410-9415
-
-
Goering, L.M.1
Hoshijima, K.2
Hug, B.3
Bisgrove, B.4
Kispert, A.5
Grunwald, D.J.6
-
12
-
-
0031692014
-
Molecular identification of spadetail: regulation of zebrafish trunk and tail mesoderm formation by T-box genes
-
Griffin K.J., Amacher S.L., Kimmel C.B., Kimelman D. Molecular identification of spadetail: regulation of zebrafish trunk and tail mesoderm formation by T-box genes. Development 1998, 125:3379-3388.
-
(1998)
Development
, vol.125
, pp. 3379-3388
-
-
Griffin, K.J.1
Amacher, S.L.2
Kimmel, C.B.3
Kimelman, D.4
-
13
-
-
0036679340
-
Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries
-
Henry C.A., Urban M.K., Dill K.K., Merlie J.P., Page M.F., Kimmel C.B., Amacher S.L. Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries. Development 2002, 129:3693-3704.
-
(2002)
Development
, vol.129
, pp. 3693-3704
-
-
Henry, C.A.1
Urban, M.K.2
Dill, K.K.3
Merlie, J.P.4
Page, M.F.5
Kimmel, C.B.6
Amacher, S.L.7
-
14
-
-
0034234968
-
Control of her1 expression during zebrafish somitogenesis by a delta-dependent oscillator and an independent wave-front activity
-
Holley S.A., Geisler R., Nüsslein-Volhard C. Control of her1 expression during zebrafish somitogenesis by a delta-dependent oscillator and an independent wave-front activity. Genes. Dev. 2000, 14:1678-1690.
-
(2000)
Genes. Dev.
, vol.14
, pp. 1678-1690
-
-
Holley, S.A.1
Geisler, R.2
Nüsslein-Volhard, C.3
-
15
-
-
0036332729
-
Her1 and the notch pathway function within the oscillator mechanism that regulates zebrafish somitogenesis
-
Holley S.A., Julich D., Rauch G.J., Geisler R., Nüsslein-Volhard C. her1 and the notch pathway function within the oscillator mechanism that regulates zebrafish somitogenesis. Development 2002, 129:1175-1183.
-
(2002)
Development
, vol.129
, pp. 1175-1183
-
-
Holley, S.A.1
Julich, D.2
Rauch, G.J.3
Geisler, R.4
Nüsslein-Volhard, C.5
-
16
-
-
33745000977
-
Noise-resistant and synchronized oscillation of the segmentation clock
-
Horikawa K., Ishimatsu K., Yoshimoto E., Kondo S., Takeda H. Noise-resistant and synchronized oscillation of the segmentation clock. Nature 2006, 441:719-723.
-
(2006)
Nature
, vol.441
, pp. 719-723
-
-
Horikawa, K.1
Ishimatsu, K.2
Yoshimoto, E.3
Kondo, S.4
Takeda, H.5
-
17
-
-
84908222357
-
Signalling dynamics in vertebrate segmentation
-
Hubaud A., Pourquié O. Signalling dynamics in vertebrate segmentation. Nat. Rev. Mol. Cell. Biol. 2014, 15:709-721.
-
(2014)
Nat. Rev. Mol. Cell. Biol.
, vol.15
, pp. 709-721
-
-
Hubaud, A.1
Pourquié, O.2
-
18
-
-
0031106250
-
Tbx6, a Brachyury-related gene expressed by ventral mesendodermal precursors in the zebrafish embryo
-
Hug B., Walter V., Grunwald D.J. tbx6, a Brachyury-related gene expressed by ventral mesendodermal precursors in the zebrafish embryo. Dev. Biol. 1997, 183:61-73.
-
(1997)
Dev. Biol.
, vol.183
, pp. 61-73
-
-
Hug, B.1
Walter, V.2
Grunwald, D.J.3
-
19
-
-
41149150649
-
Transcription of fgf8 is regulated by activating and repressive cis-elements at the midbrain-hindbrain boundary in zebrafish embryos
-
Inoue F., Parvin M.S., Yamasu K. Transcription of fgf8 is regulated by activating and repressive cis-elements at the midbrain-hindbrain boundary in zebrafish embryos. Dev. Biol. 2008, 316:471-486.
-
(2008)
Dev. Biol.
, vol.316
, pp. 471-486
-
-
Inoue, F.1
Parvin, M.S.2
Yamasu, K.3
-
20
-
-
84866515106
-
A cis-regulatory module upstream of deltaC regulated by Ntla and Tbx16 drives expression in the tailbud, presomitic mesoderm and somites
-
Jahangiri L., Nelson A.C., Wardle F.C. A cis-regulatory module upstream of deltaC regulated by Ntla and Tbx16 drives expression in the tailbud, presomitic mesoderm and somites. Dev. Biol. 2012, 371:110-120.
-
(2012)
Dev. Biol.
, vol.371
, pp. 110-120
-
-
Jahangiri, L.1
Nelson, A.C.2
Wardle, F.C.3
-
21
-
-
25444488956
-
Transposon tools and methods in zebrafish
-
Kawakami K. Transposon tools and methods in zebrafish. Dev. Dyn. 2005, 234:244-254.
-
(2005)
Dev. Dyn.
, vol.234
, pp. 244-254
-
-
Kawakami, K.1
-
22
-
-
18844427286
-
Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites
-
Kawamura A., Koshida S., Hijikata H., Sakaguchi T., Kondoh H., Takada S. Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites. Genes. Dev. 2005, 19:1156-1161.
-
(2005)
Genes. Dev.
, vol.19
, pp. 1156-1161
-
-
Kawamura, A.1
Koshida, S.2
Hijikata, H.3
Sakaguchi, T.4
Kondoh, H.5
Takada, S.6
-
23
-
-
0029045033
-
Stages of embryonic development of the zebrafish
-
Kimmel C.B., Ballard W.W., Kimmel S.R., Ullmann B., Schilling T.F. Stages of embryonic development of the zebrafish. Dev. Dyn. 1995, 203:253-310.
-
(1995)
Dev. Dyn.
, vol.203
, pp. 253-310
-
-
Kimmel, C.B.1
Ballard, W.W.2
Kimmel, S.R.3
Ullmann, B.4
Schilling, T.F.5
-
24
-
-
33744975862
-
Alx, a zebrafish homolog of Chx10, marks ipsilateral descending excitatory interneurons that participate in the regulation of spinal locomotor circuits
-
Kimura Y., Okamura Y., Higashijima S. alx, a zebrafish homolog of Chx10, marks ipsilateral descending excitatory interneurons that participate in the regulation of spinal locomotor circuits. J. Neurosci. 2006, 26:5684-5697.
-
(2006)
J. Neurosci.
, vol.26
, pp. 5684-5697
-
-
Kimura, Y.1
Okamura, Y.2
Higashijima, S.3
-
25
-
-
0035308590
-
A highly efficient Escherichia coli-based chromosome engineering system adapted for recombinogenic targeting and subcloning of BAC DNA
-
Lee E.C., Yu D., Martinez de Velasco J., Tessarollo L., Swing D.A., Court D.L., Jenkins N.A., Copeland N.G. A highly efficient Escherichia coli-based chromosome engineering system adapted for recombinogenic targeting and subcloning of BAC DNA. Genomics 2001, 73:56-65.
-
(2001)
Genomics
, vol.73
, pp. 56-65
-
-
Lee, E.C.1
Yu, D.2
Martinez de Velasco, J.3
Tessarollo, L.4
Swing, D.A.5
Court, D.L.6
Jenkins, N.A.7
Copeland, N.G.8
-
26
-
-
0442294191
-
Regulation of segmental patterning by retinoic acid signaling during Xenopus somitogenesis
-
Moreno T.A., Kintner C. Regulation of segmental patterning by retinoic acid signaling during Xenopus somitogenesis. Dev. Cell. 2004, 6:205-218.
-
(2004)
Dev. Cell.
, vol.6
, pp. 205-218
-
-
Moreno, T.A.1
Kintner, C.2
-
27
-
-
62649158882
-
A gene regulatory network directed by zebrafish No tail accounts for its roles in mesoderm formation
-
Morley R.H., Lachani K., Keefe D., Gilchrist M.J., Flicek P., Smith J.C., Wardle F.C. A gene regulatory network directed by zebrafish No tail accounts for its roles in mesoderm formation. Proc. Natl. Acad. Sci. USA 2009, 106:3829-3834.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 3829-3834
-
-
Morley, R.H.1
Lachani, K.2
Keefe, D.3
Gilchrist, M.J.4
Flicek, P.5
Smith, J.C.6
Wardle, F.C.7
-
28
-
-
84887608344
-
Gbx2 functions as a transcriptional repressor to regulate the specification and morphogenesis of the mid-hindbrain junction in a dosage- and stage-dependent manner
-
Nakayama Y., Kikuta H., Kanai M., Yoshikawa K., Kawamura A., Kobayashi K., Wang Z., Khan A., Kawakami K., Yamasu K. Gbx2 functions as a transcriptional repressor to regulate the specification and morphogenesis of the mid-hindbrain junction in a dosage- and stage-dependent manner. Mech. Dev. 2013, 130:532-552.
-
(2013)
Mech. Dev.
, vol.130
, pp. 532-552
-
-
Nakayama, Y.1
Kikuta, H.2
Kanai, M.3
Yoshikawa, K.4
Kawamura, A.5
Kobayashi, K.6
Wang, Z.7
Khan, A.8
Kawakami, K.9
Yamasu, K.10
-
29
-
-
0036613420
-
Tbx24, encoding a T-box protein, is mutated in the zebrafish somite-segmentation mutant fused somites
-
Nikaido M., Kawakami A., Sawada A., Furutani-Seiki M., Takeda H., Araki K. Tbx24, encoding a T-box protein, is mutated in the zebrafish somite-segmentation mutant fused somites. Nat. Genet. 2002, 31:195-199.
-
(2002)
Nat. Genet.
, vol.31
, pp. 195-199
-
-
Nikaido, M.1
Kawakami, A.2
Sawada, A.3
Furutani-Seiki, M.4
Takeda, H.5
Araki, K.6
-
30
-
-
0031057863
-
Conservation of BMP signaling in zebrafish mesoderm patterning
-
Nikaido M., Tada M., Saji T., Ueno N. Conservation of BMP signaling in zebrafish mesoderm patterning. Mech. Dev. 1997, 61:75-88.
-
(1997)
Mech. Dev.
, vol.61
, pp. 75-88
-
-
Nikaido, M.1
Tada, M.2
Saji, T.3
Ueno, N.4
-
31
-
-
0035984002
-
Hairy/E(spl)-related (Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formation of anterior segmental boundaries in the zebrafish
-
Oates A.C., Ho R.K. Hairy/E(spl)-related (Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formation of anterior segmental boundaries in the zebrafish. Development 2002, 129:2929-2946.
-
(2002)
Development
, vol.129
, pp. 2929-2946
-
-
Oates, A.C.1
Ho, R.K.2
-
32
-
-
84856165921
-
Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock
-
Oates A.C., Morelli L.G., Ares S. Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock. Development 2012, 139:625-639.
-
(2012)
Development
, vol.139
, pp. 625-639
-
-
Oates, A.C.1
Morelli, L.G.2
Ares, S.3
-
33
-
-
50649117174
-
Mesp2 and Tbx6 cooperatively create periodic patterns coupled with the clock machinery during mouse somitogenesis
-
Oginuma M., Niwa Y., Chapman D.L., Saga Y. Mesp2 and Tbx6 cooperatively create periodic patterns coupled with the clock machinery during mouse somitogenesis. Development 2008, 135:2555-2562.
-
(2008)
Development
, vol.135
, pp. 2555-2562
-
-
Oginuma, M.1
Niwa, Y.2
Chapman, D.L.3
Saga, Y.4
-
34
-
-
0030840351
-
Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis
-
Palmeirim I., Henrique D., Ish-Horowicz D., Pourquié O. Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis. Cell 1997, 91:639-648.
-
(1997)
Cell
, vol.91
, pp. 639-648
-
-
Palmeirim, I.1
Henrique, D.2
Ish-Horowicz, D.3
Pourquié, O.4
-
35
-
-
0034880203
-
Tight transcriptional control of the ETS domain factors Erm and Pea3 by Fgf signaling during early zebrafish development
-
Raible F., Brand M. Tight transcriptional control of the ETS domain factors Erm and Pea3 by Fgf signaling during early zebrafish development. Mech. Dev. 2001, 107:105-117.
-
(2001)
Mech. Dev.
, vol.107
, pp. 105-117
-
-
Raible, F.1
Brand, M.2
-
36
-
-
34848818078
-
Synchrony dynamics during initiation, failure, and rescue of the segmentation clock
-
Riedel-Kruse I.H., Muller C., Oates A.C. Synchrony dynamics during initiation, failure, and rescue of the segmentation clock. Science 2007, 317:1911-1915.
-
(2007)
Science
, vol.317
, pp. 1911-1915
-
-
Riedel-Kruse, I.H.1
Muller, C.2
Oates, A.C.3
-
37
-
-
0035514186
-
The making of the somite: molecular events in vertebrate segmentation
-
Saga Y., Takeda H. The making of the somite: molecular events in vertebrate segmentation. Nat. Rev. Genet. 2001, 2:835-845.
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 835-845
-
-
Saga, Y.1
Takeda, H.2
-
38
-
-
0035214904
-
Fgf/MAPK signalling is a crucial positional cue in somite boundary formation
-
Sawada A., Shinya M., Jiang Y.J., Kawakami A., Kuroiwa A., Takeda H. Fgf/MAPK signalling is a crucial positional cue in somite boundary formation. Development 2001, 128:4873-4880.
-
(2001)
Development
, vol.128
, pp. 4873-4880
-
-
Sawada, A.1
Shinya, M.2
Jiang, Y.J.3
Kawakami, A.4
Kuroiwa, A.5
Takeda, H.6
-
39
-
-
84875566370
-
Topology and dynamics of the zebrafish segmentation clock core circuit
-
Schröter C., Ares S., Morelli L.G., Isakova A., Hens K., Soroldoni D., Gajewski M., Julicher F., Maerkl S.J., Deplancke B., Oates A.C. Topology and dynamics of the zebrafish segmentation clock core circuit. PLoS Biol. 2012, 10:e1001364.
-
(2012)
PLoS Biol.
, vol.10
, pp. e1001364
-
-
Schröter, C.1
Ares, S.2
Morelli, L.G.3
Isakova, A.4
Hens, K.5
Soroldoni, D.6
Gajewski, M.7
Julicher, F.8
Maerkl, S.J.9
Deplancke, B.10
Oates, A.C.11
-
40
-
-
0028120273
-
Binding of an ETS-related protein within the DNase I hypersensitive site of the HER2/neu promoter in human breast cancer cells
-
Scott G.K., Daniel J.C., Xiong X., Maki R.A., Kabat D., Benz C.C. Binding of an ETS-related protein within the DNase I hypersensitive site of the HER2/neu promoter in human breast cancer cells. J. Biol. Chem. 1994, 269:19848-19858.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 19848-19858
-
-
Scott, G.K.1
Daniel, J.C.2
Xiong, X.3
Maki, R.A.4
Kabat, D.5
Benz, C.C.6
-
41
-
-
84865188377
-
Crosstalk between Fgf and Wnt signaling in the zebrafish tailbud
-
Stulberg M.J., Lin A., Zhao H., Holley S.A. Crosstalk between Fgf and Wnt signaling in the zebrafish tailbud. Dev. Biol. 2012, 369:298-307.
-
(2012)
Dev. Biol.
, vol.369
, pp. 298-307
-
-
Stulberg, M.J.1
Lin, A.2
Zhao, H.3
Holley, S.A.4
-
42
-
-
84856719895
-
The Her7 node modulates the network topology of the zebrafish segmentation clock via sequestration of the Hes6 hub
-
Trofka A., Schwendinger-Schreck J., Brend T., Pontius W., Emonet T., Holley S.A. The Her7 node modulates the network topology of the zebrafish segmentation clock via sequestration of the Hes6 hub. Development 2012, 139:940-947.
-
(2012)
Development
, vol.139
, pp. 940-947
-
-
Trofka, A.1
Schwendinger-Schreck, J.2
Brend, T.3
Pontius, W.4
Emonet, T.5
Holley, S.A.6
-
43
-
-
84930531867
-
Tbx6, Mesp-b and Ripply1 regulate the onset of skeletal myogenesis in zebrafish
-
Windner S.E., Doris R.A., Ferguson C.M., Nelson A.C., Valentin G., Tan H., Oates A.C., Wardle F.C., Devoto S.H. Tbx6, Mesp-b and Ripply1 regulate the onset of skeletal myogenesis in zebrafish. Development 2015, 142:1159-1168.
-
(2015)
Development
, vol.142
, pp. 1159-1168
-
-
Windner, S.E.1
Doris, R.A.2
Ferguson, C.M.3
Nelson, A.C.4
Valentin, G.5
Tan, H.6
Oates, A.C.7
Wardle, F.C.8
Devoto, S.H.9
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